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Grid/Grid_stencil.h

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2015-04-10 04:24:01 +01:00
#ifndef GRID_STENCIL_H
#define GRID_STENCIL_H
//////////////////////////////////////////////////////////////////////////////////////////
// Must not lose sight that goal is to be able to construct really efficient
// gather to a point stencil code. CSHIFT is not the best way, so need
// additional stencil support.
//
// Stencil based code will pre-exchange haloes and use a table lookup for neighbours.
// This will be done with generality to allow easier efficient implementations.
// Overlap of comms and compute could be semi-automated by tabulating off-node connected,
// and
//
// Lattice <foo> could also allocate haloes which get used for stencil code.
//
// Grid could create a neighbour index table for a given stencil.
//
// Could also implement CovariantCshift, to fuse the loops and enhance performance.
//
//
// General stencil computation:
//
// Generic services
// 0) Prebuild neighbour tables
// 1) Compute sizes of all haloes/comms buffers; allocate them.
//
// 2) Gather all faces, and communicate.
// 3) Loop over result sites, giving nbr index/offnode info for each
//
// Could take a
// SpinProjectFaces
// start comms
// complete comms
// Reconstruct Umu
//
// Approach.
//
//////////////////////////////////////////////////////////////////////////////////////////
namespace Grid {
struct CommsRequest {
int words;
int unified_buffer_offset;
int tag;
int to_rank;
int from_rank;
} ;
class CartesianStencil { // Stencil runs along coordinate axes only; NO diagonal fill in.
public:
int _checkerboard;
int _npoints; // Move to template param?
GridBase * _grid;
// npoints of these
std::vector<int> _directions;
std::vector<int> _distances;
std::vector<int> _comm_buf_size;
std::vector<int> _permute_type;
// npoints x Osites() of these
std::vector<std::vector<int> > _offsets;
std::vector<std::vector<int> > _is_local;
std::vector<std::vector<int> > _permute;
int _unified_buffer_size;
int _request_count;
std::vector<CommsRequest> CommsRequests;
CartesianStencil(GridBase *grid,
int npoints,
int checkerboard,
const std::vector<int> &directions,
const std::vector<int> &distances);
// Add to tables for various cases; is this mistaken. only local if 1 proc in dim
// Can this be avoided with simpler coding of comms?
void Local (int point, int dimension,int shift,int cbmask);
void Comms (int point, int dimension,int shift,int cbmask);
void CopyPlane(int point, int dimension,int lplane,int rplane,int cbmask,int permute);
void ScatterPlane (int point,int dimension,int plane,int cbmask,int offset);
// Could allow a functional munging of the halo to another type during the comms.
// this could implement the 16bit/32bit/64bit compression.
template<class vobj> void HaloExchange(Lattice<vobj> &source,
std::vector<vobj,alignedAllocator<vobj> > &u_comm_buf)
{
// conformable(source._grid,_grid);
assert(source._grid==_grid);
if (u_comm_buf.size() != _unified_buffer_size ) u_comm_buf.resize(_unified_buffer_size);
int u_comm_offset=0;
// Gather all comms buffers
typedef typename vobj::vector_type vector_type;
typedef typename vobj::scalar_type scalar_type;
for(int point = 0 ; point < _npoints; point++) {
printf("Point %d \n",point);fflush(stdout);
int dimension = _directions[point];
int displacement = _distances[point];
int fd = _grid->_fdimensions[dimension];
int rd = _grid->_rdimensions[dimension];
// Map to always positive shift modulo global full dimension.
int shift = (displacement+fd)%fd;
int checkerboard = _grid->CheckerBoardDestination(source.checkerboard,shift);
assert (checkerboard== _checkerboard);
// the permute type
int simd_layout = _grid->_simd_layout[dimension];
int comm_dim = _grid->_processors[dimension] >1 ;
int splice_dim = _grid->_simd_layout[dimension]>1 && (comm_dim);
// Gather phase
int sshift [2];
if ( comm_dim ) {
sshift[0] = _grid->CheckerBoardShift(_checkerboard,dimension,shift,0);
sshift[1] = _grid->CheckerBoardShift(_checkerboard,dimension,shift,1);
if ( sshift[0] == sshift[1] ) {
if (splice_dim) {
printf("splice 0x3 \n");fflush(stdout);
GatherStartCommsSimd(source,dimension,shift,0x3,u_comm_buf,u_comm_offset);
} else {
printf("NO splice 0x3 \n");fflush(stdout);
GatherStartComms(source,dimension,shift,0x3,u_comm_buf,u_comm_offset);
}
} else {
if(splice_dim){
printf("splice 0x1,2 \n");fflush(stdout);
GatherStartCommsSimd(source,dimension,shift,0x1,u_comm_buf,u_comm_offset);// if checkerboard is unfavourable take two passes
GatherStartCommsSimd(source,dimension,shift,0x2,u_comm_buf,u_comm_offset);// both with block stride loop iteration
} else {
printf("NO splice 0x1,2 \n");fflush(stdout);
GatherStartComms(source,dimension,shift,0x1,u_comm_buf,u_comm_offset);
GatherStartComms(source,dimension,shift,0x2,u_comm_buf,u_comm_offset);
}
}
}
}
}
template<class vobj> void GatherStartComms(Lattice<vobj> &rhs,int dimension,int shift,int cbmask,
std::vector<vobj,alignedAllocator<vobj> > &u_comm_buf,
int &u_comm_offset)
{
typedef typename vobj::vector_type vector_type;
typedef typename vobj::scalar_type scalar_type;
GridBase *grid=_grid;
assert(rhs._grid==_grid);
// conformable(_grid,rhs._grid);
int fd = _grid->_fdimensions[dimension];
int rd = _grid->_rdimensions[dimension];
int simd_layout = _grid->_simd_layout[dimension];
int comm_dim = _grid->_processors[dimension] >1 ;
assert(simd_layout==1);
assert(comm_dim==1);
assert(shift>=0);
assert(shift<fd);
int buffer_size = _grid->_slice_nblock[dimension]*_grid->_slice_block[dimension];
std::vector<vobj,alignedAllocator<vobj> > send_buf(buffer_size); // hmm...
std::vector<vobj,alignedAllocator<vobj> > recv_buf(buffer_size);
int cb= (cbmask==0x2)? 1 : 0;
int sshift= _grid->CheckerBoardShift(rhs.checkerboard,dimension,shift,cb);
for(int x=0;x<rd;x++){
printf("GatherStartComms x %d/%d\n",x,rd);fflush(stdout);
int offnode = ( x+sshift >= rd );
int sx = (x+sshift)%rd;
int comm_proc = (x+sshift)/rd;
if (offnode) {
printf("GatherStartComms offnode x %d\n",x);fflush(stdout);
int words = send_buf.size();
if (cbmask != 0x3) words=words>>1;
int bytes = words * sizeof(vobj);
printf("Gather_plane_simple dimension %d sx %d cbmask %d\n",dimension,sx,cbmask);fflush(stdout);
Gather_plane_simple (rhs,send_buf,dimension,sx,cbmask);
printf("GatherStartComms gathered offnode x %d\n",x);fflush(stdout);
int rank = _grid->_processor;
int recv_from_rank;
int xmit_to_rank;
_grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
// FIXME Implement asynchronous send & also avoid buffer copy
_grid->SendToRecvFrom((void *)&send_buf[0],
xmit_to_rank,
(void *)&recv_buf[0],
recv_from_rank,
bytes);
printf("GatherStartComms communicated offnode x %d\n",x);fflush(stdout);
printf("GatherStartComms inserting %d buf size %d\n",u_comm_offset,buffer_size);fflush(stdout);
for(int i=0;i<buffer_size;i++){
u_comm_buf[u_comm_offset+i]=recv_buf[i];
}
u_comm_offset+=buffer_size;
printf("GatherStartComms inserted x %d\n",x);fflush(stdout);
}
}
}
template<class vobj>
void GatherStartCommsSimd(Lattice<vobj> &rhs,int dimension,int shift,int cbmask,
std::vector<vobj,alignedAllocator<vobj> > &u_comm_buf,
int &u_comm_offset)
{
const int Nsimd = _grid->Nsimd();
typedef typename vobj::vector_type vector_type;
typedef typename vobj::scalar_type scalar_type;
int fd = _grid->_fdimensions[dimension];
int rd = _grid->_rdimensions[dimension];
int ld = _grid->_ldimensions[dimension];
int simd_layout = _grid->_simd_layout[dimension];
int comm_dim = _grid->_processors[dimension] >1 ;
assert(comm_dim==1);
assert(simd_layout==2);
assert(shift>=0);
assert(shift<fd);
int permute_type=_grid->PermuteType(dimension);
///////////////////////////////////////////////
// Simd direction uses an extract/merge pair
///////////////////////////////////////////////
int buffer_size = _grid->_slice_nblock[dimension]*_grid->_slice_block[dimension];
int words = sizeof(vobj)/sizeof(vector_type);
/* FIXME ALTERNATE BUFFER DETERMINATION */
std::vector<std::vector<scalar_type> > send_buf_extract(Nsimd,std::vector<scalar_type>(buffer_size*words) );
std::vector<std::vector<scalar_type> > recv_buf_extract(Nsimd,std::vector<scalar_type>(buffer_size*words) );
int bytes = buffer_size*words*sizeof(scalar_type);
std::vector<scalar_type *> pointers(Nsimd); //
std::vector<scalar_type *> rpointers(Nsimd); // received pointers
///////////////////////////////////////////
// Work out what to send where
///////////////////////////////////////////
int cb = (cbmask==0x2)? 1 : 0;
int sshift= _grid->CheckerBoardShift(rhs.checkerboard,dimension,shift,cb);
std::vector<int> comm_offnode(simd_layout);
std::vector<int> comm_proc (simd_layout); //relative processor coord in dim=dimension
std::vector<int> icoor(_grid->Nd());
for(int x=0;x<rd;x++){
int comm_any = 0;
for(int s=0;s<simd_layout;s++) {
int shifted_x = x+s*rd+sshift;
comm_offnode[s] = shifted_x >= ld;
comm_any = comm_any | comm_offnode[s];
comm_proc[s] = shifted_x/ld;
}
int o = 0;
int bo = x*_grid->_ostride[dimension];
int sx = (x+sshift)%rd;
if ( comm_any ) {
for(int i=0;i<Nsimd;i++){
pointers[i] = (scalar_type *)&send_buf_extract[i][0];
}
Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
for(int i=0;i<Nsimd;i++){
int s;
_grid->iCoorFromIindex(icoor,i);
s = icoor[dimension];
if(comm_offnode[s]){
int rank = _grid->_processor;
int recv_from_rank;
int xmit_to_rank;
_grid->ShiftedRanks(dimension,comm_proc[s],xmit_to_rank,recv_from_rank);
_grid->SendToRecvFrom((void *)&send_buf_extract[i][0],
xmit_to_rank,
(void *)&recv_buf_extract[i][0],
recv_from_rank,
bytes);
rpointers[i] = (scalar_type *)&recv_buf_extract[i][0];
} else {
rpointers[i] = (scalar_type *)&send_buf_extract[i][0];
}
}
// Permute by swizzling pointers in merge
int permute_slice=0;
int lshift=sshift%ld;
int wrap =lshift/rd;
int num =lshift%rd;
if ( x< rd-num ) permute_slice=wrap;
else permute_slice = 1-wrap;
int toggle_bit = (Nsimd>>(permute_type+1));
int PermuteMap;
for(int i=0;i<Nsimd;i++){
if ( permute_slice ) {
PermuteMap=i^toggle_bit;
pointers[i] = rpointers[PermuteMap];
} else {
pointers[i] = rpointers[i];
}
}
// Here we don't want to scatter, just place into a buffer.
for(int i=0;i<buffer_size;i++){
merge(u_comm_buf[u_comm_offset+i],pointers);
}
}
}
}
};
}
2015-04-10 04:24:01 +01:00
#endif