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I/O improvements

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paboyle
2017-06-11 23:14:10 +01:00
parent 092dcd4e04
commit 3bfd1f13e6
26 changed files with 779 additions and 579 deletions
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9
lib/cartesian/Cartesian_base.h
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@ -50,7 +50,6 @@ public:
GridBase(const std::vector<int> & processor_grid) : CartesianCommunicator(processor_grid) {};
// Physics Grid information.
std::vector<int> _simd_layout;// Which dimensions get relayed out over simd lanes.
std::vector<int> _fdimensions;// (full) Global dimensions of array prior to cb removal
@ -63,13 +62,12 @@ public:
int _isites;
int _fsites; // _isites*_osites = product(dimensions).
int _gsites;
std::vector<int> _slice_block; // subslice information
std::vector<int> _slice_block;// subslice information
std::vector<int> _slice_stride;
std::vector<int> _slice_nblock;
// Might need these at some point
// std::vector<int> _lstart; // local start of array in gcoors. _processor_coor[d]*_ldimensions[d]
// std::vector<int> _lend; // local end of array in gcoors _processor_coor[d]*_ldimensions[d]+_ldimensions_[d]-1
std::vector<int> _lstart; // local start of array in gcoors _processor_coor[d]*_ldimensions[d]
std::vector<int> _lend ; // local end of array in gcoors _processor_coor[d]*_ldimensions[d]+_ldimensions_[d]-1
public:
@ -176,6 +174,7 @@ public:
inline int gSites(void) const { return _isites*_osites*_Nprocessors; };
inline int Nd (void) const { return _ndimension;};
inline const std::vector<int> LocalStarts(void) { return _lstart; };
inline const std::vector<int> &FullDimensions(void) { return _fdimensions;};
inline const std::vector<int> &GlobalDimensions(void) { return _gdimensions;};
inline const std::vector<int> &LocalDimensions(void) { return _ldimensions;};

8
lib/cartesian/Cartesian_full.h
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@ -76,6 +76,8 @@ public:
_ldimensions.resize(_ndimension);
_rdimensions.resize(_ndimension);
_simd_layout.resize(_ndimension);
_lstart.resize(_ndimension);
_lend.resize(_ndimension);
_ostride.resize(_ndimension);
_istride.resize(_ndimension);
@ -94,8 +96,10 @@ public:
// Use a reduced simd grid
_ldimensions[d]= _gdimensions[d]/_processors[d]; //local dimensions
_rdimensions[d]= _ldimensions[d]/_simd_layout[d]; //overdecomposition
_osites *= _rdimensions[d];
_isites *= _simd_layout[d];
_lstart[d] = _processor_coor[d]*_ldimensions[d];
_lend[d] = _processor_coor[d]*_ldimensions[d]+_ldimensions[d]-1;
_osites *= _rdimensions[d];
_isites *= _simd_layout[d];
// Addressing support
if ( d==0 ) {

4
lib/cartesian/Cartesian_red_black.h
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@ -151,6 +151,8 @@ public:
_ldimensions.resize(_ndimension);
_rdimensions.resize(_ndimension);
_simd_layout.resize(_ndimension);
_lstart.resize(_ndimension);
_lend.resize(_ndimension);
_ostride.resize(_ndimension);
_istride.resize(_ndimension);
@ -169,6 +171,8 @@ public:
_gdimensions[d] = _gdimensions[d]/2; // Remove a checkerboard
}
_ldimensions[d] = _gdimensions[d]/_processors[d];
_lstart[d] = _processor_coor[d]*_ldimensions[d];
_lend[d] = _processor_coor[d]*_ldimensions[d]+_ldimensions[d]-1;
// Use a reduced simd grid
_simd_layout[d] = simd_layout[d];