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Hadrons: contractor benchmark update
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parent
0ffcfea724
commit
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@ -1,17 +1,30 @@
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#include <Hadrons/Global.hpp>
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#include <Hadrons/Global.hpp>
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#include <Hadrons/DiskVector.hpp>
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#include <Hadrons/DiskVector.hpp>
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#ifdef USE_MKL
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#include "mkl.h"
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#include "mkl_cblas.h"
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#endif
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using namespace Grid;
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using namespace Grid;
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#define EIGEN_ROW_MAJOR 1
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#define EIGEN_COL_MAJOR 2
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#ifndef EIGEN_ORDER
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#ifndef EIGEN_ORDER
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#define EIGEN_ORDER RowMajor
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#define EIGEN_ORDER EIGEN_ROW_MAJOR
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#endif
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#if (EIGEN_ORDER == EIGEN_ROW_MAJOR)
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typedef Eigen::Matrix<ComplexD, -1, -1, Eigen::RowMajor> CMat;
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#elif (EIGEN_ORDER == EIGEN_COL_MAJOR)
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typedef Eigen::Matrix<ComplexD, -1, -1, Eigen::ColMajor> CMat;
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#endif
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#endif
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typedef Eigen::Matrix<ComplexD, -1, -1, Eigen::EIGEN_ORDER> CMat;
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typedef std::vector<std::vector<CMat>> CMatSet;
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typedef std::vector<std::vector<CMat>> CMatSet;
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template <typename TwoMatFn>
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#pragma omp declare reduction(ComplexPlus: ComplexD: omp_out += omp_in)
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inline void trBenchmark(const std::string name, const CMatSet &mat, TwoMatFn fn)
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template <typename Function>
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inline void trBenchmark(const std::string name, const CMatSet &mat,
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const ComplexD ref, Function fn)
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{
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{
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double t, flops, bytes, n = mat[0][0].rows()*mat[0][0].cols();
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double t, flops, bytes, n = mat[0][0].rows()*mat[0][0].cols();
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unsigned int nMat = mat[0].size();
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unsigned int nMat = mat[0].size();
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@ -27,8 +40,37 @@ inline void trBenchmark(const std::string name, const CMatSet &mat, TwoMatFn fn)
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flops = nMat*(6.*n + 2.*(n - 1.));
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flops = nMat*(6.*n + 2.*(n - 1.));
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bytes = nMat*(2.*n*sizeof(ComplexD));
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bytes = nMat*(2.*n*sizeof(ComplexD));
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std::cout << std::setw(30) << name << ": result= "
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std::cout << std::setw(30) << name << ": diff= "
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<< std::setw(10) << buf
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<< std::setw(12) << std::norm(buf-ref)
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<< std::setw(10) << t/1.0e6 << " sec "
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<< std::setw(10) << flops/t/1.0e3 << " GFlop/s "
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<< std::setw(10) << bytes/t*1.0e6/1024/1024/1024 << " GB/s "
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<< std::endl;
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::sleep(1);
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}
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template <typename Function>
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inline void mulBenchmark(const std::string name, const CMatSet &mat,
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const CMat ref, Function fn)
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{
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double t, flops, bytes;
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double nr = mat[0][0].rows(), nc = mat[0][0].cols(), n = nr*nc;
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unsigned int nMat = mat[0].size();
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CMat buf(mat[0][0].rows(), mat[0][0].rows());
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t = 0.;
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for (unsigned int i = 0; i < nMat; ++i)
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{
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t -= usecond();
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fn(buf, mat[0][i], mat[1][i]);
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t += usecond();
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}
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flops = nMat*(n*(6.*nc + 2.*(nc - 1.)));
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bytes = nMat*((2.*n+nr*nr)*sizeof(ComplexD));
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std::cout << std::setw(30) << name << ": diff= "
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<< std::setw(12) << (buf-ref).squaredNorm()
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<< std::setw(10) << t/1.0e6 << " sec "
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<< std::setw(10) << flops/t/1.0e3 << " GFlop/s "
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<< std::setw(10) << flops/t/1.0e3 << " GFlop/s "
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<< std::setw(10) << bytes/t*1.0e6/1024/1024/1024 << " GB/s "
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<< std::setw(10) << bytes/t*1.0e6/1024/1024/1024 << " GB/s "
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<< std::endl;
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<< std::endl;
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@ -51,41 +93,60 @@ int main(int argc, char *argv[])
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nj = std::stoi(argv[2]);
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nj = std::stoi(argv[2]);
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nMat = std::stoi(argv[3]);
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nMat = std::stoi(argv[3]);
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std::cout << "==== generating random matrices" << std::endl;
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std::cout << "\n*** ALL-TO-ALL MATRIX CONTRACTION BENCHMARK ***\n" << std::endl;
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CMatSet mat(2);
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std::cout << nMat << " " << ni << "x" << nj << " matrices\n" << std::endl;
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CMat buf;
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#ifdef EIGEN_USE_MKL_ALL
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std::cout << "Eigen uses the MKL" << std::endl;
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#endif
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std::cout << "Eigen uses ";
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#if (EIGEN_ORDER == EIGEN_ROW_MAJOR)
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std::cout << "row-major ordering" << std::endl;
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#elif (EIGEN_ORDER == EIGEN_COL_MAJOR)
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std::cout << "column-major ordering" << std::endl;
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#endif
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std::cout << "Eigen uses " << Eigen::nbThreads() << " thread(s)" << std::endl;
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#ifdef USE_MKL
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std::cout << "MKL uses " << mkl_get_max_threads() << " thread(s)" << std::endl;
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#endif
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std::cout << std::endl;
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CMatSet mat(2);
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CMat buf;
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ComplexD ref;
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mat[0].resize(nMat, Eigen::MatrixXcd::Random(ni, nj));
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mat[0].resize(nMat, Eigen::MatrixXcd::Random(ni, nj));
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mat[1].resize(nMat, Eigen::MatrixXcd::Random(nj, ni));
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mat[1].resize(nMat, Eigen::MatrixXcd::Random(nj, ni));
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std::cout << "==== tr(A*B) benchmark" << std::endl;
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std::cout << "==== tr(A*B) benchmarks" << std::endl;
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trBenchmark("Naive loop rows first", mat,
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ref = (mat[0].back()*mat[1].back()).trace();
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trBenchmark("Naive loop rows first", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = 0.;
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(+:res)
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int i = 0; i < a.rows(); ++i)
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for (unsigned int i = 0; i < a.rows(); ++i)
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for (unsigned int j = 0; j < a.cols(); ++j)
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for (unsigned int j = 0; j < a.cols(); ++j)
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{
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{
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res += a(i, j)*b(j, i);
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res += a(i, j)*b(j, i);
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}
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}
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});
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});
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trBenchmark("Naive loop cols first", mat,
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trBenchmark("Naive loop cols first", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = 0.;
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int j = 0; j < a.cols(); ++j)
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for (unsigned int j = 0; j < a.cols(); ++j)
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for (unsigned int i = 0; i < a.rows(); ++i)
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for (unsigned int i = 0; i < a.rows(); ++i)
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{
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{
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res += a(i, j)*b(j, i);
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res += a(i, j)*b(j, i);
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}
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}
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});
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});
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trBenchmark("Eigen tr(A*B)", mat,
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trBenchmark("Eigen tr(A*B)", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = (a*b).trace();
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res = (a*b).trace();
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});
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});
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trBenchmark("Eigen global dot", mat,
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trBenchmark("Eigen global dot", mat, ref,
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[&buf](ComplexD &res, const CMat &a, const CMat &b)
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[&buf](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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buf = b.transpose();
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buf = b.transpose();
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@ -94,31 +155,113 @@ int main(int argc, char *argv[])
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res = av.conjugate().dot(bv);
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res = av.conjugate().dot(bv);
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});
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});
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trBenchmark("Eigen row-wise dot", mat,
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trBenchmark("Eigen row-wise dot", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = 0.;
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(+:res)
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int r = 0; r < a.rows(); ++r)
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for (unsigned int r = 0; r < a.rows(); ++r)
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{
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{
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res += a.row(r).conjugate().dot(b.col(r));
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res += a.row(r).conjugate().dot(b.col(r));
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}
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}
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});
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});
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trBenchmark("Eigen col-wise dot", mat,
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trBenchmark("Eigen col-wise dot", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = 0.;
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(+:res)
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int r = 0; r < a.cols(); ++r)
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for (unsigned int c = 0; c < a.cols(); ++c)
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{
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{
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res += a.col(r).conjugate().dot(b.row(r));
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res += a.col(c).conjugate().dot(b.row(c));
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}
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}
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});
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});
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trBenchmark("Eigen Hadamard", mat,
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trBenchmark("Eigen Hadamard", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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{
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res = a.cwiseProduct(b.transpose()).sum();
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res = a.cwiseProduct(b.transpose()).sum();
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});
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});
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#ifdef USE_MKL
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trBenchmark("MKL row-wise zdotu", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int r = 0; r < a.rows(); ++r)
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{
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ComplexD tmp;
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#if (EIGEN_ORDER == EIGEN_ROW_MAJOR)
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cblas_zdotu_sub(a.cols(), a.data() + r*a.cols(), 1, b.data() + r, b.cols(), &tmp);
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#elif (EIGEN_ORDER == EIGEN_COL_MAJOR)
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cblas_zdotu_sub(a.cols(), a.data() + r, a.rows(), b.data() + r*b.rows(), 1, &tmp);
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#endif
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res += tmp;
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}
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});
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trBenchmark("MKL col-wise zdotu", mat, ref,
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[](ComplexD &res, const CMat &a, const CMat &b)
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{
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res = 0.;
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#pragma omp parallel for schedule(static) reduction(ComplexPlus:res)
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for (unsigned int c = 0; c < a.cols(); ++c)
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{
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ComplexD tmp;
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#if (EIGEN_ORDER == EIGEN_ROW_MAJOR)
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cblas_zdotu_sub(a.rows(), a.data() + c, a.cols(), b.data() + c*b.cols(), 1, &tmp);
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#elif (EIGEN_ORDER == EIGEN_COL_MAJOR)
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cblas_zdotu_sub(a.rows(), a.data() + c*a.rows(), 1, b.data() + c, b.rows(), &tmp);
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#endif
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res += tmp;
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}
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});
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#endif
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std::cout << std::endl;
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std::cout << "==== A*B benchmarks" << std::endl;
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buf = mat[0].back()*mat[1].back();
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mulBenchmark("Naive", mat, buf,
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[](CMat &res, const CMat &a, const CMat &b)
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{
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unsigned int ni = a.rows(), nj = a.cols();
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#pragma omp parallel for collapse(2)
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for (unsigned int i = 0; i < ni; ++i)
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for (unsigned int k = 0; k < ni; ++k)
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{
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res(i, k) = a(i, 0)*b(0, k);
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}
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#pragma omp parallel for collapse(2)
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for (unsigned int i = 0; i < ni; ++i)
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for (unsigned int k = 0; k < ni; ++k)
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for (unsigned int j = 1; j < nj; ++j)
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{
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res(i, k) += a(i, j)*b(j, k);
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}
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});
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mulBenchmark("Eigen A*B", mat, buf,
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[](CMat &res, const CMat &a, const CMat &b)
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{
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res = a*b;
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});
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#ifdef USE_MKL
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mulBenchmark("MKL A*B", mat, buf,
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[](CMat &res, const CMat &a, const CMat &b)
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{
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const ComplexD one(1., 0.), zero(0., 0.);
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#if (EIGEN_ORDER == EIGEN_ROW_MAJOR)
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cblas_zgemm(CblasRowMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
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a.cols(), &one, a.data(), a.cols(), b.data(), b.cols(), &zero,
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res.data(), res.cols());
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#elif (EIGEN_ORDER == EIGEN_COL_MAJOR)
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cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
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a.cols(), &one, a.data(), a.rows(), b.data(), b.rows(), &zero,
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res.data(), res.rows());
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#endif
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});
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#endif
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std::cout << std::endl;
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return EXIT_SUCCESS;
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return EXIT_SUCCESS;
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}
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}
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