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Begginings of slice summation and subblocking
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parent
7007d6a176
commit
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2
TODO
2
TODO
@ -26,7 +26,7 @@ FUNCTIONALITY:
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Not done, or just incomplete
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Not done, or just incomplete
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* random number generation
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* random number generation
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* Consider switch std::vector to boost arrays.
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* Consider switch std::vector to boost arrays or something lighter weight
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boost::multi_array<type, 3> A()... to replace multi1d, multi2d etc..
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boost::multi_array<type, 3> A()... to replace multi1d, multi2d etc..
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* How to define simple matrix operations, such as flavour matrices?
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* How to define simple matrix operations, such as flavour matrices?
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46
configure
vendored
46
configure
vendored
@ -1365,8 +1365,9 @@ Optional Features:
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--disable-dependency-tracking
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--disable-dependency-tracking
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speeds up one-time build
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speeds up one-time build
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--disable-openmp do not use OpenMP
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--disable-openmp do not use OpenMP
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--enable-simd=SSE|AVX|AVX2|AVX512
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--enable-simd=SSE|AVX|AVX2|AVX512|MIC
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Select instructions
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Select instructions to be SSE4.0, AVX 1.0, AVX
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2.0+FMA, AVX 512, MIC
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--enable-comms=none|mpi Select communications
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--enable-comms=none|mpi Select communications
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Some influential environment variables:
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Some influential environment variables:
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@ -4945,6 +4946,18 @@ fi
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done
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done
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for ac_header in endian.h
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do :
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ac_fn_c_check_header_mongrel "$LINENO" "endian.h" "ac_cv_header_endian_h" "$ac_includes_default"
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if test "x$ac_cv_header_endian_h" = xyes; then :
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cat >>confdefs.h <<_ACEOF
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#define HAVE_ENDIAN_H 1
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_ACEOF
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fi
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done
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# Checks for typedefs, structures, and compiler characteristics.
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# Checks for typedefs, structures, and compiler characteristics.
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ac_fn_c_check_type "$LINENO" "size_t" "ac_cv_type_size_t" "$ac_includes_default"
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ac_fn_c_check_type "$LINENO" "size_t" "ac_cv_type_size_t" "$ac_includes_default"
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@ -4999,32 +5012,11 @@ _ACEOF
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fi
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fi
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done
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done
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for ac_func in ntohll
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do :
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ac_fn_c_check_func "$LINENO" "ntohll" "ac_cv_func_ntohll"
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if test "x$ac_cv_func_ntohll" = xyes; then :
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cat >>confdefs.h <<_ACEOF
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#define HAVE_NTOHLL 1
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_ACEOF
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fi
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done
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for ac_func in be64toh
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do :
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ac_fn_c_check_func "$LINENO" "be64toh" "ac_cv_func_be64toh"
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if test "x$ac_cv_func_be64toh" = xyes; then :
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cat >>confdefs.h <<_ACEOF
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#define HAVE_BE64TOH 1
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_ACEOF
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fi
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done
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# Check whether --enable-simd was given.
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# Check whether --enable-simd was given.
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if test "${enable_simd+set}" = set; then :
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if test "${enable_simd+set}" = set; then :
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enableval=$enable_simd; ac_SIMD=${enable_simd}
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enableval=$enable_simd; \
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ac_SIMD=${enable_simd}
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else
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else
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ac_SIMD=AVX2
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ac_SIMD=AVX2
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fi
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fi
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@ -5049,8 +5041,8 @@ $as_echo "#define AVX1 1" >>confdefs.h
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$as_echo "#define AVX2 1" >>confdefs.h
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$as_echo "#define AVX2 1" >>confdefs.h
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;;
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;;
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AVX512)
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AVX512|MIC)
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echo Configuring for AVX512
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echo Configuring for AVX512 and MIC
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$as_echo "#define AVX512 1" >>confdefs.h
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$as_echo "#define AVX512 1" >>confdefs.h
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@ -16,8 +16,8 @@
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/* GRID_COMMS_NONE */
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/* GRID_COMMS_NONE */
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/* #undef GRID_COMMS_NONE */
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/* #undef GRID_COMMS_NONE */
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/* Define to 1 if you have the `be64toh' function. */
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/* Define to 1 if you have the <endian.h> header file. */
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/* #undef HAVE_BE64TOH */
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/* #undef HAVE_ENDIAN_H */
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/* Define to 1 if you have the `gettimeofday' function. */
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/* Define to 1 if you have the `gettimeofday' function. */
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#define HAVE_GETTIMEOFDAY 1
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#define HAVE_GETTIMEOFDAY 1
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@ -34,9 +34,6 @@
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/* Define to 1 if you have the <memory.h> header file. */
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/* Define to 1 if you have the <memory.h> header file. */
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#define HAVE_MEMORY_H 1
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#define HAVE_MEMORY_H 1
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/* Define to 1 if you have the `ntohll' function. */
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/* #undef HAVE_NTOHLL */
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/* Define to 1 if you have the <stdint.h> header file. */
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/* Define to 1 if you have the <stdint.h> header file. */
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#define HAVE_STDINT_H 1
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#define HAVE_STDINT_H 1
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@ -15,8 +15,8 @@
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/* GRID_COMMS_NONE */
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/* GRID_COMMS_NONE */
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#undef GRID_COMMS_NONE
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#undef GRID_COMMS_NONE
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/* Define to 1 if you have the `be64toh' function. */
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/* Define to 1 if you have the <endian.h> header file. */
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#undef HAVE_BE64TOH
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#undef HAVE_ENDIAN_H
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/* Define to 1 if you have the `gettimeofday' function. */
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/* Define to 1 if you have the `gettimeofday' function. */
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#undef HAVE_GETTIMEOFDAY
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#undef HAVE_GETTIMEOFDAY
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@ -33,9 +33,6 @@
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/* Define to 1 if you have the <memory.h> header file. */
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/* Define to 1 if you have the <memory.h> header file. */
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#undef HAVE_MEMORY_H
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#undef HAVE_MEMORY_H
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/* Define to 1 if you have the `ntohll' function. */
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#undef HAVE_NTOHLL
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/* Define to 1 if you have the <stdint.h> header file. */
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/* Define to 1 if you have the <stdint.h> header file. */
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#undef HAVE_STDINT_H
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#undef HAVE_STDINT_H
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@ -283,7 +283,7 @@ namespace Grid {
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if ( comm_any ) {
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if ( comm_any ) {
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for(int i=0;i<Nsimd;i++){
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for(int i=0;i<Nsimd;i++){
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pointers[i] = (scalar_type *)&send_buf_extract[i][0];
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pointers[Nsimd-1-i] = (scalar_type *)&send_buf_extract[i][0];
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}
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}
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Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
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Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
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@ -332,9 +332,9 @@ namespace Grid {
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for(int i=0;i<Nsimd;i++){
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for(int i=0;i<Nsimd;i++){
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if ( permute_slice ) {
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if ( permute_slice ) {
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PermuteMap=i^toggle_bit;
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PermuteMap=i^toggle_bit;
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pointers[i] = rpointers[PermuteMap];
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pointers[Nsimd-1-i] = rpointers[PermuteMap];
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} else {
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} else {
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pointers[i] = rpointers[i];
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pointers[Nsimd-1-i] = rpointers[i];
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}
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}
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}
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}
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@ -1,12 +1,71 @@
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#ifndef GRID_SUMMATION_H
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#ifndef GRID_SUMMATION_H
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#define GRID_SUMMATION_H
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#define GRID_SUMMATION_H
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void subdivides(GridBase *coarse,GridBase *fine)
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{
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assert(coarse->_ndimension == fine->_ndimension);
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int _ndimension = coarse->_ndimension;
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// local and global volumes subdivide cleanly after SIMDization
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for(int d=0;d<_ndimension;d++){
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assert((fine->_rdimensions[d] / coarse->_rdimensions[d])* coarse->_rdimensions[d]==fine->_rdimensions[d]);
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assert((fine->_ldimensions[d] / coarse->_ldimensions[d])* coarse->_ldimensions[d]==fine->_ldimensions[d]);
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assert((fine->_gdimensions[d] / coarse->_gdimensions[d])* coarse->_gdimensions[d]==fine->_gdimensions[d]);
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assert((fine->_fdimensions[d] / coarse->_fdimensions[d])* coarse->_fdimensions[d]==fine->_fdimensions[d]);
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}
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}
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// Generic name : Coarsen?
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// : SubMeshSum?
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//
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template<class vobj>
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template<class vobj>
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inline void sumBlocks(Lattice<vobj> &coarseData,const Lattice<vobj &fineData)
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inline void sumBlocks(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
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{
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{
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GridBase * fine = findData._grid;
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GridBase * fine = findData._grid;
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GridBase * coarse= findData._grid;
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GridBase * coarse= findData._grid;
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subdivides(coars,fine); // require they map
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int _ndimension = coarse->_ndimension;
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std::vector<bool> replicated(_ndimension,false);
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std::vector<int> block_r (_dimension);
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std::vector<int> block_f (_dimension);
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///////////////////////////////////////////////////////////
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// Detect whether the result is replicated in dimension d
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///////////////////////////////////////////////////////////
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for(int d=0 ; d<_ndimension;d++){
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if ( (_fdimensions[d] == 1) && (coarse->_processors[d]>1) ) {
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replicated[d]=true;
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}
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block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
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block_l[d] = fine->_ldimensions[d] / coarse->_ldimensions[d];
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block_f[d] = fine->_fdimensions[d] / coarse->_fdimensions[d];
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}
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coaseData=zero;
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//FIXME Bagel's strategy: loop over fine sites
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// identify corresponding coarse site, but coarse sites are
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// divided across threads. Not so easy to do in openmp but
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// there must be a way
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for(int sf=0;sf<fine->oSites();sf++){
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int sc;
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vobj sum=zero;
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std::vector<int> coor_c(_ndimension);
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std::vector<int> coor_f(_ndimension);
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GridBase::CoorFromIndex(coor_f,sf,fine->_rdimensions);
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for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/fine->_rdimensions;
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GridBase::IndexFromCoor(coor_c,sc,coarse->_rdimensions);
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coarseData._odata[sc]=coarseData._odata[sc]+fineData._odata[sf];
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}
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return;
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return;
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}
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}
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#endif
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#endif
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