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Merge remote-tracking branch 'upstream/feature/hadrons' into feature/hadrons

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This commit is contained in:
Vera Guelpers
2018-04-25 09:36:39 +01:00
parent 8462bbfe63 b234784c8e
commit 507009089b
160 changed files with 5541 additions and 2664 deletions
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2
tests/IO/Test_ildg_io.cc
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@ -79,7 +79,7 @@ int main (int argc, char ** argv)
std::cout <<GridLogMessage<<"** Writing out ILDG conf *********"<<std::endl;
std::cout <<GridLogMessage<<"**************************************"<<std::endl;
std::string file("./ckpoint_ildg.4000");
IldgWriter _IldgWriter;
IldgWriter _IldgWriter(Fine.IsBoss());
_IldgWriter.open(file);
_IldgWriter.writeConfiguration(Umu,4000,std::string("dummy_ildg_LFN"),std::string("dummy_config"));
_IldgWriter.close();

2
tests/IO/Test_serialisation.cc
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@ -120,6 +120,8 @@ void tensorConvTestFn(GridSerialRNG &rng, const std::string label)
int main(int argc,char **argv)
{
Grid_init(&argc,&argv);
GridSerialRNG rng;
rng.SeedFixedIntegers(std::vector<int>({42,10,81,9}));

27
tests/Test_dwf_mixedcg_prec.cc
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@ -103,6 +103,33 @@ int main (int argc, char ** argv)
std::cout << "Diff between mixed and regular CG: " << diff << std::endl;
#ifdef HAVE_LIME
if( GridCmdOptionExists(argv,argv+argc,"--checksums") ){
std::string file1("./Propagator1");
std::string file2("./Propagator2");
emptyUserRecord record;
uint32_t nersc_csum;
uint32_t scidac_csuma;
uint32_t scidac_csumb;
typedef SpinColourVectorD FermionD;
typedef vSpinColourVectorD vFermionD;
BinarySimpleMunger<FermionD,FermionD> munge;
std::string format = getFormatString<vFermionD>();
BinaryIO::writeLatticeObject<vFermionD,FermionD>(result_o,file1,munge, 0, format,
nersc_csum,scidac_csuma,scidac_csumb);
std::cout << " Mixed checksums "<<std::hex << scidac_csuma << " "<<scidac_csumb<<std::endl;
BinaryIO::writeLatticeObject<vFermionD,FermionD>(result_o_2,file1,munge, 0, format,
nersc_csum,scidac_csuma,scidac_csumb);
std::cout << " CG checksums "<<std::hex << scidac_csuma << " "<<scidac_csumb<<std::endl;
}
#endif
Grid_finalize();
}

1
tests/core/Test_main.cc
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@ -393,7 +393,6 @@ int main(int argc, char **argv) {
}
random(Foo);
*/
lex_sites(Foo);
Integer mm[4];
mm[0] = 1;

123
tests/forces/Test_gp_plaq_force.cc Normal file
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@ -0,0 +1,123 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./tests/Test_gp_rect_force.cc
Copyright (C) 2015
Author: paboyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
using namespace std;
using namespace Grid;
using namespace Grid::QCD;
int main (int argc, char ** argv)
{
Grid_init(&argc,&argv);
std::vector<int> latt_size = GridDefaultLatt();
std::vector<int> simd_layout = GridDefaultSimd(Nd,vComplex::Nsimd());
std::vector<int> mpi_layout = GridDefaultMpi();
GridCartesian Grid(latt_size,simd_layout,mpi_layout);
GridRedBlackCartesian RBGrid(&Grid);
int threads = GridThread::GetThreads();
std::cout<<GridLogMessage << "Grid is setup to use "<<threads<<" threads"<<std::endl;
std::vector<int> seeds({1,2,3,4});
GridParallelRNG pRNG(&Grid);
pRNG.SeedFixedIntegers(std::vector<int>({45,12,81,9}));
LatticeGaugeField U(&Grid);
SU3::HotConfiguration(pRNG,U);
double beta = 1.0;
double c1 = 0.331;
//ConjugatePlaqPlusRectangleActionR Action(beta,c1);
ConjugateWilsonGaugeActionR Action(beta);
//WilsonGaugeActionR Action(beta);
ComplexD S = Action.S(U);
// get the deriv of phidag MdagM phi with respect to "U"
LatticeGaugeField UdSdU(&Grid);
Action.deriv(U,UdSdU);
////////////////////////////////////
// Modify the gauge field a little
////////////////////////////////////
RealD dt = 0.0001;
LatticeColourMatrix mommu(&Grid);
LatticeColourMatrix forcemu(&Grid);
LatticeGaugeField mom(&Grid);
LatticeGaugeField Uprime(&Grid);
for(int mu=0;mu<Nd;mu++){
SU3::GaussianFundamentalLieAlgebraMatrix(pRNG, mommu); // Traceless antihermitian momentum; gaussian in lie alg
PokeIndex<LorentzIndex>(mom,mommu,mu);
// fourth order exponential approx
parallel_for(auto i=mom.begin();i<mom.end();i++){ // exp(pmu dt) * Umu
Uprime[i](mu) = U[i](mu) + mom[i](mu)*U[i](mu)*dt ;
}
}
ComplexD Sprime = Action.S(Uprime);
//////////////////////////////////////////////
// Use derivative to estimate dS
//////////////////////////////////////////////
LatticeComplex dS(&Grid); dS = zero;
for(int mu=0;mu<Nd;mu++){
auto UdSdUmu = PeekIndex<LorentzIndex>(UdSdU,mu);
mommu = PeekIndex<LorentzIndex>(mom,mu);
// Update gauge action density
// U = exp(p dt) U
// dU/dt = p U
// so dSdt = trace( dUdt dSdU) = trace( p UdSdUmu )
dS = dS - trace(mommu*UdSdUmu)*dt*2.0;
}
ComplexD dSpred = sum(dS);
std::cout << GridLogMessage << " S "<<S<<std::endl;
std::cout << GridLogMessage << " Sprime "<<Sprime<<std::endl;
std::cout << GridLogMessage << "dS "<<Sprime-S<<std::endl;
std::cout << GridLogMessage << "pred dS "<< dSpred <<std::endl;
assert( fabs(real(Sprime-S-dSpred)) < 1.0e-2 ) ;
std::cout<< GridLogMessage << "Done" <<std::endl;
Grid_finalize();
}

1
tests/hadrons/Test_QED.cc
View File

@ -27,6 +27,7 @@
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
#include <Grid/Hadrons/Modules.hpp>
using namespace Grid;
using namespace Hadrons;

1
tests/hadrons/Test_hadrons.hpp
View File

@ -26,6 +26,7 @@
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
#include <Grid/Hadrons/Modules.hpp>
using namespace Grid;
using namespace Hadrons;

169
tests/hadrons/Test_hadrons_2AS_spectrum.cc
View File

@ -1,169 +0,0 @@
/*******************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: tests/hadrons/Test_hadrons_spectrum.cc
Copyright (C) 2015
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory.
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
using namespace Grid;
using namespace Hadrons;
BEGIN_HADRONS_NAMESPACE
BEGIN_MODULE_NAMESPACE(MFermion)
MODULE_REGISTER_NS(GaugeProp2AS, TGaugeProp<WilsonTwoIndexAntiSymmetricImplR>, MFermion);
END_MODULE_NAMESPACE
BEGIN_MODULE_NAMESPACE(MSource)
MODULE_REGISTER_NS(Point2AS, TPoint<WilsonTwoIndexAntiSymmetricImplR>, MSource);
END_MODULE_NAMESPACE
BEGIN_MODULE_NAMESPACE(MContraction)
MODULE_REGISTER_NS(Meson2AS, ARG(TMeson<WilsonTwoIndexAntiSymmetricImplR, WilsonTwoIndexAntiSymmetricImplR>), MContraction);
// MODULE_REGISTER_NS(BaryonMultirep, ARG(TBaryon<FIMPL, FIMPL, FIMPL>), MContraction);
END_MODULE_NAMESPACE
BEGIN_MODULE_NAMESPACE(MSink)
MODULE_REGISTER_NS(ScalarPoint2AS, TPoint<WilsonTwoIndexAntiSymmetricImplR>, MSink);
END_MODULE_NAMESPACE
BEGIN_MODULE_NAMESPACE(MSolver)
MODULE_REGISTER_NS(RBPrecCG2AS, TRBPrecCG<WilsonTwoIndexAntiSymmetricImplR>, MSolver);
END_MODULE_NAMESPACE
BEGIN_MODULE_NAMESPACE(MAction)
MODULE_REGISTER_NS(WilsonClover2AS, TWilsonClover<WilsonTwoIndexAntiSymmetricImplR>, MAction);
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
int main(int argc, char *argv[])
{
// initialization //////////////////////////////////////////////////////////
Grid_init(&argc, &argv);
HadronsLogError.Active(GridLogError.isActive());
HadronsLogWarning.Active(GridLogWarning.isActive());
HadronsLogMessage.Active(GridLogMessage.isActive());
HadronsLogIterative.Active(GridLogIterative.isActive());
HadronsLogDebug.Active(GridLogDebug.isActive());
LOG(Message) << "Grid initialized" << std::endl;
// run setup ///////////////////////////////////////////////////////////////
Application application;
std::vector<std::string> flavour = {"l", "s"};
std::vector<double> mass = {-0.01, -0.04};
double csw = 1.0;
// global parameters
Application::GlobalPar globalPar;
globalPar.trajCounter.start = 1500;
globalPar.trajCounter.end = 1520;
globalPar.trajCounter.step = 20;
globalPar.seed = "1 2 3 4";
application.setPar(globalPar);
// gauge field
application.createModule<MGauge::Unit>("gauge");
MSource::Point2AS::Par ptPar;
ptPar.position = "0 0 0 0";
application.createModule<MSource::Point2AS>("pt", ptPar);
// sink
MSink::ScalarPoint2AS::Par sinkPar;
sinkPar.mom = "0 0 0";
application.createModule<MSink::ScalarPoint2AS>("sink", sinkPar);
// set fermion boundary conditions to be periodic space, antiperiodic time.
std::string boundary = "1 1 1 -1";
for (unsigned int i = 0; i < flavour.size(); ++i)
{
// actions
MAction::WilsonClover2AS::Par actionPar;
actionPar.gauge = "gauge";
actionPar.mass = mass[i];
actionPar.csw_r = csw;
actionPar.csw_t = csw;
actionPar.clover_anisotropy.isAnisotropic= false;
actionPar.clover_anisotropy.t_direction = Nd-1 ;
actionPar.clover_anisotropy.xi_0 = 1.0 ;
actionPar.clover_anisotropy.nu = 1.0 ;
actionPar.boundary = boundary;
application.createModule<MAction::WilsonClover2AS>("WilsonClover2AS_" + flavour[i], actionPar);
// solvers
MSolver::RBPrecCG2AS::Par solverPar;
solverPar.action = "WilsonClover2AS_" + flavour[i];
solverPar.residual = 1.0e-8;
solverPar.maxIteration = 10000;
application.createModule<MSolver::RBPrecCG2AS>("CG_" + flavour[i],
solverPar);
// propagators
MFermion::GaugeProp2AS::Par quarkPar;
quarkPar.solver = "CG_" + flavour[i];
quarkPar.source = "pt";
application.createModule<MFermion::GaugeProp2AS>("Qpt_" + flavour[i], quarkPar);
quarkPar.source = "z2";
application.createModule<MFermion::GaugeProp2AS>("QZ2_" + flavour[i], quarkPar);
}
for (unsigned int i = 0; i < flavour.size(); ++i)
for (unsigned int j = i; j < flavour.size(); ++j)
{
MContraction::Meson2AS::Par mesPar;
mesPar.output = "mesons2AS/pt_" + flavour[i] + flavour[j];
mesPar.q1 = "Qpt_" + flavour[i];
mesPar.q2 = "Qpt_" + flavour[j];
mesPar.gammas = "all";
mesPar.sink = "sink";
application.createModule<MContraction::Meson2AS>("meson_pt_"
+ flavour[i] + flavour[j],
mesPar);
// mesPar.output = "mesons2AS/Z2_" + flavour[i] + flavour[j];
// mesPar.q1 = "QZ2_" + flavour[i];
// mesPar.q2 = "QZ2_" + flavour[j];
// mesPar.gammas = "all";
// mesPar.sink = "sink";
// application.createModule<MContraction::Meson2AS>("meson_Z2_"
// + flavour[i] + flavour[j],
// mesPar);
}
for (unsigned int i = 0; i < flavour.size(); ++i)
for (unsigned int j = i; j < flavour.size(); ++j)
for (unsigned int k = j; k < flavour.size(); ++k)
{
MContraction::Baryon::Par barPar;
barPar.output = "baryons/pt_" + flavour[i] + flavour[j] + flavour[k];
barPar.q1 = "Qpt_" + flavour[i];
barPar.q2 = "Qpt_" + flavour[j];
barPar.q3 = "Qpt_" + flavour[k];
application.createModule<MContraction::Baryon>(
"baryon_pt_" + flavour[i] + flavour[j] + flavour[k], barPar);
}
// execution
application.saveParameterFile("spectrum.xml");
application.run();
// epilogue
LOG(Message) << "Grid is finalizing now" << std::endl;
Grid_finalize();
return EXIT_SUCCESS;
}

1
tests/hadrons/Test_hadrons_meson_3pt.cc
View File

@ -26,6 +26,7 @@
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
#include <Grid/Hadrons/Modules.hpp>
using namespace Grid;
using namespace Hadrons;

1
tests/hadrons/Test_hadrons_quark.cc
View File

@ -26,7 +26,6 @@
*******************************************************************************/
#include "Test_hadrons.hpp"
#include <Grid/Hadrons/Modules/MFermion/GaugeProp.hpp>
using namespace Grid;
using namespace QCD;

1
tests/hadrons/Test_hadrons_spectrum.cc
View File

@ -26,6 +26,7 @@
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
#include <Grid/Hadrons/Modules.hpp>
using namespace Grid;
using namespace Hadrons;

1
tests/hadrons/Test_hadrons_wilsonFund.cc
View File

@ -26,6 +26,7 @@
*******************************************************************************/
#include <Grid/Hadrons/Application.hpp>
#include <Grid/Hadrons/Modules.hpp>
using namespace Grid;
using namespace Hadrons;

7
tests/lanczos/Test_dwf_compressed_lanczos_reorg.cc
View File

@ -58,7 +58,7 @@ public:
{
assert(this->subspace.size()==nbasis);
emptyUserRecord record;
Grid::QCD::ScidacWriter WR;
Grid::QCD::ScidacWriter WR(this->_FineGrid->IsBoss());
WR.open(evecs_file);
for(int k=0;k<nbasis;k++) {
WR.writeScidacFieldRecord(this->subspace[k],record);
@ -96,7 +96,7 @@ public:
{
int n = this->evec_coarse.size();
emptyUserRecord record;
Grid::QCD::ScidacWriter WR;
Grid::QCD::ScidacWriter WR(this->_CoarseGrid->IsBoss());
WR.open(evecs_file);
for(int k=0;k<n;k++) {
WR.writeScidacFieldRecord(this->evec_coarse[k],record);
@ -180,7 +180,6 @@ int main (int argc, char ** argv) {
GridCartesian * CoarseGrid4 = SpaceTimeGrid::makeFourDimGrid(coarseLatt, GridDefaultSimd(Nd,vComplex::Nsimd()),GridDefaultMpi());
GridRedBlackCartesian * CoarseGrid4rb = SpaceTimeGrid::makeFourDimRedBlackGrid(CoarseGrid4);
GridCartesian * CoarseGrid5 = SpaceTimeGrid::makeFiveDimGrid(cLs,CoarseGrid4);
GridRedBlackCartesian * CoarseGrid5rb = SpaceTimeGrid::makeFourDimRedBlackGrid(CoarseGrid5);
// Gauge field
LatticeGaugeField Umu(UGrid);
@ -206,7 +205,7 @@ int main (int argc, char ** argv) {
const int nbasis= 60;
assert(nbasis==Ns1);
LocalCoherenceLanczosScidac<vSpinColourVector,vTComplex,nbasis> _LocalCoherenceLanczos(FrbGrid,CoarseGrid5rb,HermOp,Odd);
LocalCoherenceLanczosScidac<vSpinColourVector,vTComplex,nbasis> _LocalCoherenceLanczos(FrbGrid,CoarseGrid5,HermOp,Odd);
std::cout << GridLogMessage << "Constructed LocalCoherenceLanczos" << std::endl;
assert( (Params.doFine)||(Params.doFineRead));

4
tests/solver/Test_dwf_mrhs_cg.cc
View File

@ -114,7 +114,7 @@ int main (int argc, char ** argv)
{
FGrid->Barrier();
ScidacWriter _ScidacWriter;
ScidacWriter _ScidacWriter(FGrid->IsBoss());
_ScidacWriter.open(file);
std::cout << GridLogMessage << "****************************************************************** "<<std::endl;
std::cout << GridLogMessage << " Writing out gauge field "<<std::endl;
@ -144,7 +144,7 @@ int main (int argc, char ** argv)
std::cout << GridLogMessage << "****************************************************************** "<<std::endl;
std::stringstream filefn; filefn << filef << "."<< n;
ScidacWriter _ScidacWriter;
ScidacWriter _ScidacWriter(FGrid->IsBoss());
_ScidacWriter.open(filefn.str());
_ScidacWriter.writeScidacFieldRecord(src[n],record);
_ScidacWriter.close();