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https://github.com/paboyle/Grid.git
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Hadrons: code cleaning
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@ -56,8 +56,8 @@ public:
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GRID_SERIALIZABLE_CLASS_MEMBERS(A2AMesonFieldPar,
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int, cacheBlock,
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int, block,
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std::string, v,
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std::string, w,
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std::string, left,
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std::string, right,
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std::string, output,
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std::string, gammas,
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std::vector<std::string>, mom);
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@ -140,11 +140,6 @@ public:
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virtual void setup(void);
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// execution
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virtual void execute(void);
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private:
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// IO
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std::string ioname(const unsigned int m, const unsigned int g) const;
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std::string filename(const unsigned int m, const unsigned int g) const;
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void saveBlock(const A2AMatrixSet<MF_IO_TYPE> &mf, IoHelper &h);
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private:
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bool hasPhase_{false};
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std::string momphName_;
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@ -154,7 +149,6 @@ private:
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};
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MODULE_REGISTER(A2AMesonField, ARG(TA2AMesonField<FIMPL>), MContraction);
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MODULE_REGISTER(ZA2AMesonField, ARG(TA2AMesonField<ZFIMPL>), MContraction);
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/******************************************************************************
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* TA2AMesonField implementation *
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@ -171,7 +165,7 @@ TA2AMesonField<FImpl>::TA2AMesonField(const std::string name)
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template <typename FImpl>
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std::vector<std::string> TA2AMesonField<FImpl>::getInput(void)
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{
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std::vector<std::string> in = {par().v, par().w};
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std::vector<std::string> in = {par().left, par().right};
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return in;
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}
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@ -227,7 +221,6 @@ void TA2AMesonField<FImpl>::setup(void)
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}
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mom_.push_back(p);
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}
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envCache(std::vector<ComplexField>, momphName_, 1,
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par().mom.size(), envGetGrid(ComplexField));
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envTmpLat(ComplexField, "coor");
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@ -240,19 +233,19 @@ void TA2AMesonField<FImpl>::setup(void)
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template <typename FImpl>
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void TA2AMesonField<FImpl>::execute(void)
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{
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auto &v = envGet(std::vector<FermionField>, par().v);
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auto &w = envGet(std::vector<FermionField>, par().w);
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auto &left = envGet(std::vector<FermionField>, par().left);
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auto &right = envGet(std::vector<FermionField>, par().right);
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int nt = env().getDim().back();
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int N_i = w.size();
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int N_j = v.size();
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int N_i = left.size();
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int N_j = right.size();
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int ngamma = gamma_.size();
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int nmom = mom_.size();
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int block = par().block;
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int cacheBlock = par().cacheBlock;
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LOG(Message) << "Computing all-to-all meson fields" << std::endl;
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LOG(Message) << "W: '" << par().w << "' V: '" << par().v << "'" << std::endl;
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LOG(Message) << "Left: '" << par().left << "' Right: '" << par().right << "'" << std::endl;
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LOG(Message) << "Momenta:" << std::endl;
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for (auto &p: mom_)
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{
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@ -309,7 +302,7 @@ void TA2AMesonField<FImpl>::execute(void)
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auto filenameFn = [this, &ionameFn](const unsigned int m, const unsigned int g)
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{
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return par().output + "." + std::to_string(vm().getTrajectory())
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+ "/" + ioname(m, g) + ".h5";
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+ "/" + ionameFn(m, g) + ".h5";
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};
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auto metadataFn = [this](const unsigned int m, const unsigned int g)
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@ -328,189 +321,7 @@ void TA2AMesonField<FImpl>::execute(void)
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Kernel kernel(gamma_, ph, envGetGrid(FermionField));
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envGetTmp(Computation, computation);
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computation.execute(w, v, kernel, ionameFn, filenameFn, metadataFn);
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//////////////////////////////////////////////////////////////////////////
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// i,j is first loop over SchurBlock factors reusing 5D matrices
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// ii,jj is second loop over cacheBlock factors for high perf contractoin
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// iii,jjj are loops within cacheBlock
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// Total index is sum of these i+ii+iii etc...
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//////////////////////////////////////////////////////////////////////////
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// double flops;
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// double bytes;
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// double vol = env().getVolume();
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// double t_kernel = 0.0;
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// double nodes = env().getGrid()->NodeCount();
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// double tot_kernel;
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// envGetTmp(Vector<MF_IO_TYPE>, mfBuf);
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// envGetTmp(Vector<Complex>, mfCache);
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// double t0 = usecond();
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// int NBlock_i = N_i/block + (((N_i % block) != 0) ? 1 : 0);
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// int NBlock_j = N_j/block + (((N_j % block) != 0) ? 1 : 0);
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// for(int i=0;i<N_i;i+=block)
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// for(int j=0;j<N_j;j+=block)
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// {
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// // Get the W and V vectors for this block^2 set of terms
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// int N_ii = MIN(N_i-i,block);
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// int N_jj = MIN(N_j-j,block);
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// LOG(Message) << "Meson field block "
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// << j/block + NBlock_j*i/block + 1
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// << "/" << NBlock_i*NBlock_j << " [" << i <<" .. "
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// << i+N_ii-1 << ", " << j <<" .. " << j+N_jj-1 << "]"
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// << std::endl;
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// A2AMatrixSet<MF_IO_TYPE> mfBlock(mfBuf.data(),nmom,ngamma,nt,N_ii,N_jj);
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// // Series of cache blocked chunks of the contractions within this block
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// flops = 0.0;
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// bytes = 0.0;
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// for(int ii=0;ii<N_ii;ii+=cacheBlock)
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// for(int jj=0;jj<N_jj;jj+=cacheBlock)
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// {
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// int N_iii = MIN(N_ii-ii,cacheBlock);
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// int N_jjj = MIN(N_jj-jj,cacheBlock);
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// A2AMatrixSet<Complex> mfCacheBlock(mfCache.data(),nmom,ngamma,nt,N_iii,N_jjj);
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// startTimer("contraction: total");
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// makeMesonFieldBlock(mfCacheBlock, &w[i+ii], &v[j+jj], gamma_, ph,
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// env().getNd() - 1, this);
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// stopTimer("contraction: total");
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// // flops for general N_c & N_s
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// flops += vol * ( 2 * 8.0 + 6.0 + 8.0*nmom) * N_iii*N_jjj*ngamma;
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// bytes += vol * (12.0 * sizeof(Complex) ) * N_iii*N_jjj
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// + vol * ( 2.0 * sizeof(Complex) *nmom ) * N_iii*N_jjj* ngamma;
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// startTimer("cache copy");
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// parallel_for_nest5(int m =0;m< nmom;m++)
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// for(int g =0;g< ngamma;g++)
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// for(int t =0;t< nt;t++)
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// for(int iii=0;iii< N_iii;iii++)
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// for(int jjj=0;jjj< N_jjj;jjj++)
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// {
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// mfBlock(m,g,t,ii+iii,jj+jjj) = mfCacheBlock(m,g,t,iii,jjj);
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// }
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// stopTimer("cache copy");
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// }
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// // perf
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// tot_kernel = getDTimer("contraction: colour trace & mom.")
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// + getDTimer("contraction: local space sum");
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// t_kernel = tot_kernel - t_kernel;
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// LOG(Message) << "Kernel perf " << flops/t_kernel/1.0e3/nodes
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// << " Gflop/s/node " << std::endl;
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// LOG(Message) << "Kernel perf " << bytes/t_kernel*1.0e6/1024/1024/1024/nodes
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// << " GB/s/node " << std::endl;
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// t_kernel = tot_kernel;
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// // IO
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// if (!par().output.empty())
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// {
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// double blockSize, ioTime;
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// unsigned int myRank = env().getGrid()->ThisRank(),
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// nRank = env().getGrid()->RankCount();
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// LOG(Message) << "Writing block to disk" << std::endl;
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// ioTime = -getDTimer("IO: write block");
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// startTimer("IO: total");
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// makeFileDir(filename(0, 0), env().getGrid());
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// #ifdef MF_PARALLEL_IO
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// env().getGrid()->Barrier();
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// // make task list for current node
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// nodeIo_.clear();
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// for(int f = myRank; f < nmom*ngamma; f += nRank)
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// {
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// IoHelper h;
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// h.i = i;
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// h.j = j;
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// h.m = f/ngamma;
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// h.g = f % ngamma;
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// h.io = A2AMatrixIo<MF_IO_TYPE>(filename(h.m, h.g),
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// ioname(h.m, h.g), nt, N_i, N_j);
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// for (auto pmu: mom_[h.m])
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// {
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// h.md.momentum.push_back(pmu);
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// }
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// h.md.gamma = gamma_[h.g];
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// nodeIo_.push_back(h);
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// }
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// // parallel IO
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// for (auto &h: nodeIo_)
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// {
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// saveBlock(mfBlock, h);
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// }
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// env().getGrid()->Barrier();
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// #else
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// // serial IO, for testing purposes only
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// for(int m = 0; m < nmom; m++)
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// for(int g = 0; g < ngamma; g++)
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// {
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// IoHelper h;
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// h.i = i;
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// h.j = j;
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// h.m = m;
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// h.g = g;
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// h.io = A2AMatrixIo<MF_IO_TYPE>(filename(h.m, h.g),
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// ioname(h.m, h.g), nt, N_i, N_j);
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// for (auto pmu: mom_[h.m])
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// {
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// h.md.momentum.push_back(pmu);
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// }
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// h.md.gamma = gamma_[h.g];
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// saveBlock(mfBlock, h);
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// }
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// #endif
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// stopTimer("IO: total");
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// blockSize = static_cast<double>(nmom*ngamma*nt*N_ii*N_jj*sizeof(MF_IO_TYPE));
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// ioTime += getDTimer("IO: write block");
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// LOG(Message) << "HDF5 IO done " << sizeString(blockSize) << " in "
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// << ioTime << " us ("
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// << blockSize/ioTime*1.0e6/1024/1024
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// << " MB/s)" << std::endl;
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// }
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// }
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}
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// IO
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template <typename FImpl>
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std::string TA2AMesonField<FImpl>::ioname(unsigned int m, unsigned int g) const
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{
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std::stringstream ss;
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ss << gamma_[g] << "_";
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for (unsigned int mu = 0; mu < mom_[m].size(); ++mu)
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{
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ss << mom_[m][mu] << ((mu == mom_[m].size() - 1) ? "" : "_");
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}
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return ss.str();
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}
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template <typename FImpl>
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std::string TA2AMesonField<FImpl>::filename(unsigned int m, unsigned int g) const
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{
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return par().output + "." + std::to_string(vm().getTrajectory())
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+ "/" + ioname(m, g) + ".h5";
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}
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template <typename FImpl>
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void TA2AMesonField<FImpl>::saveBlock(const A2AMatrixSet<MF_IO_TYPE> &mf, IoHelper &h)
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{
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if ((h.i == 0) and (h.j == 0))
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{
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startTimer("IO: file creation");
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h.io.initFile(h.md, par().block);
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stopTimer("IO: file creation");
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}
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startTimer("IO: write block");
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h.io.saveBlock(mf, h.m, h.g, h.i, h.j);
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stopTimer("IO: write block");
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computation.execute(left, right, kernel, ionameFn, filenameFn, metadataFn);
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}
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END_MODULE_NAMESPACE
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