1
0
mirror of https://github.com/paboyle/Grid.git synced 2025-06-19 16:27:05 +01:00

Open up dependency on Eigen and FFTW

This commit is contained in:
paboyle
2016-07-07 22:31:07 +01:00
parent fc4a043663
commit a0676beeb1
146 changed files with 754 additions and 602 deletions

11
tests/IO/Make.inc Normal file
View File

@ -0,0 +1,11 @@
bin_PROGRAMS += Test_nersc_io Test_serialisation
Test_nersc_io_SOURCES=Test_nersc_io.cc
Test_nersc_io_LDADD=-lGrid
Test_serialisation_SOURCES=Test_serialisation.cc
Test_serialisation_LDADD=-lGrid

19
tests/IO/Makefile.am Normal file
View File

@ -0,0 +1,19 @@
# additional include paths necessary to compile the C++ library
bin_PROGRAMS =
SUBDIRS =
AM_CXXFLAGS = -I$(top_srcdir)/include
AM_LDFLAGS = -L$(top_builddir)/lib
if USE_LAPACK
AM_CXXFLAGS += -DUSE_LAPACK
if USE_LAPACK_LIB
#if test "X${ac_LAPACK}X" != XyesX
AM_CXXFLAGS += -I$(ac_LAPACK)/include
AM_LDFLAGS += -L$(ac_LAPACK)/lib
#fi
endif
endif
include Make.inc

155
tests/IO/Test_nersc_io.cc Normal file
View File

@ -0,0 +1,155 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./tests/Test_nersc_io.cc
Copyright (C) 2015
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
Author: paboyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
using namespace std;
using namespace Grid;
using namespace Grid::QCD;
int main (int argc, char ** argv)
{
Grid_init(&argc,&argv);
std::vector<int> simd_layout = GridDefaultSimd(4,vComplex::Nsimd());
std::vector<int> mpi_layout = GridDefaultMpi();
std::vector<int> latt_size ({16,16,16,32});
std::vector<int> clatt_size ({4,4,4,8});
int orthodir=3;
int orthosz =latt_size[orthodir];
GridCartesian Fine(latt_size,simd_layout,mpi_layout);
GridCartesian Coarse(clatt_size,simd_layout,mpi_layout);
GridParallelRNG pRNGa(&Fine);
GridParallelRNG pRNGb(&Fine);
GridSerialRNG sRNGa;
GridSerialRNG sRNGb;
pRNGa.SeedRandomDevice();
sRNGa.SeedRandomDevice();
std::string rfile("./ckpoint_rng.4000");
NerscIO::writeRNGState(sRNGa,pRNGa,rfile);
NerscField rngheader;
NerscIO::readRNGState (sRNGb,pRNGb,rngheader,rfile);
LatticeComplex tmpa(&Fine); random(pRNGa,tmpa);
LatticeComplex tmpb(&Fine); random(pRNGb,tmpb);
tmpa = tmpa - tmpb;
std::cout << " difference between restored randoms and orig "<<norm2( tmpa ) <<" / "<< norm2(tmpb)<<std::endl;
ComplexD a,b;
random(sRNGa,a);
random(sRNGb,b);
std::cout << " serial RNG numbers "<<a<<" "<<b<<std::endl;
LatticeGaugeField Umu(&Fine);
LatticeGaugeField Umu_diff(&Fine);
LatticeGaugeField Umu_saved(&Fine);
std::vector<LatticeColourMatrix> U(4,&Fine);
NerscField header;
std::string file("./ckpoint_lat.4000");
NerscIO::readConfiguration(Umu,header,file);
for(int mu=0;mu<Nd;mu++){
U[mu] = PeekIndex<LorentzIndex>(Umu,mu);
}
// Painful ; fix syntactical niceness
LatticeComplex LinkTrace(&Fine);
LinkTrace=zero;
for(int mu=0;mu<Nd;mu++){
LinkTrace = LinkTrace + trace(U[mu]);
}
// (1+2+3)=6 = N(N-1)/2 terms
LatticeComplex Plaq(&Fine);
LatticeComplex cPlaq(&Coarse);
Plaq = zero;
#if 1
for(int mu=1;mu<Nd;mu++){
for(int nu=0;nu<mu;nu++){
Plaq = Plaq + trace(U[mu]*Cshift(U[nu],mu,1)*adj(Cshift(U[mu],nu,1))*adj(U[nu]));
}
}
#endif
double vol = Fine.gSites();
Complex PlaqScale(1.0/vol/6.0/3.0);
std::cout<<GridLogMessage <<"PlaqScale" << PlaqScale<<std::endl;
std::vector<TComplex> Plaq_T(orthosz);
sliceSum(Plaq,Plaq_T,Nd-1);
int Nt = Plaq_T.size();
TComplex Plaq_T_sum;
Plaq_T_sum=zero;
for(int t=0;t<Nt;t++){
Plaq_T_sum = Plaq_T_sum+Plaq_T[t];
Complex Pt=TensorRemove(Plaq_T[t]);
std::cout<<GridLogMessage << "sliced ["<<t<<"]" <<Pt*PlaqScale*Real(Nt)<<std::endl;
}
{
Complex Pt = TensorRemove(Plaq_T_sum);
std::cout<<GridLogMessage << "total " <<Pt*PlaqScale<<std::endl;
}
TComplex Tp = sum(Plaq);
Complex p = TensorRemove(Tp);
std::cout<<GridLogMessage << "calculated plaquettes " <<p*PlaqScale<<std::endl;
Complex LinkTraceScale(1.0/vol/4.0/3.0);
TComplex Tl = sum(LinkTrace);
Complex l = TensorRemove(Tl);
std::cout<<GridLogMessage << "calculated link trace " <<l*LinkTraceScale<<std::endl;
blockSum(cPlaq,Plaq);
TComplex TcP = sum(cPlaq);
Complex ll= TensorRemove(TcP);
std::cout<<GridLogMessage << "coarsened plaquettes sum to " <<ll*PlaqScale<<std::endl;
std::string clone2x3("./ckpoint_clone2x3.4000");
std::string clone3x3("./ckpoint_clone3x3.4000");
int precision32 = 1;
int tworow = 1;
NerscIO::writeConfiguration(Umu,clone3x3,0,precision32);
NerscIO::writeConfiguration(Umu,clone2x3,1,precision32);
Grid_finalize();
}

View File

@ -0,0 +1,157 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./tests/Test_serialisation.cc
Copyright (C) 2015
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
namespace Grid {
GRID_SERIALIZABLE_ENUM(myenum, undef, red, 1, blue, 2, green, 3);
class myclass: Serializable {
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(myclass,
myenum, e,
std::vector<myenum>, ve,
std::string, name,
int, x,
double, y,
bool , b,
std::vector<double>, array,
std::vector<std::vector<double>>, twodimarray,
);
myclass() {}
myclass(int i)
: array(4,5.1), twodimarray(3,std::vector<double>(2,1.23456)), ve(2, myenum::blue)
{
e=myenum::red;
x=i;
y=2*i;
b=true;
name="bother said pooh";
}
};
}
using namespace Grid;
int16_t i16 = 1;
uint16_t u16 = 2;
int32_t i32 = 3;
uint32_t u32 = 4;
int64_t i64 = 5;
uint64_t u64 = 6;
float f = M_PI;
double d = 2*M_PI;
bool b = false;
int main(int argc,char **argv)
{
{
XmlWriter WR("bother.xml");
// test basic type writing
push(WR,"BasicTypes");
write(WR,std::string("i16"),i16);
write(WR,"u16",u16);
write(WR,"i32",i32);
write(WR,"u32",u32);
write(WR,"i64",i64);
write(WR,"u64",u64);
write(WR,"f",f);
write(WR,"d",d);
write(WR,"b",b);
pop(WR);
// test serializable class writing
myclass obj(1234); // non-trivial constructor
write(WR,"obj",obj);
WR.write("obj2", obj);
std::cout << obj << std::endl;
std::vector<myclass> vec;
vec.push_back(myclass(1234));
vec.push_back(myclass(5678));
vec.push_back(myclass(3838));
write(WR, "objvec", vec);
};
// read tests
myclass copy1, copy2, copy3;
std::vector<myclass> veccopy1, veccopy2, veccopy3;
//// XML
{
XmlReader RD("bother.xml");
read(RD,"obj",copy1);
read(RD,"objvec", veccopy1);
std::cout << "Loaded (XML) -----------------" << std::endl;
std::cout << copy1 << std::endl << veccopy1 << std::endl;
}
//// binary
{
BinaryWriter BWR("bother.bin");
write(BWR,"discard",copy1 );
write(BWR,"discard",veccopy1 );
}
{
BinaryReader BRD("bother.bin");
read (BRD,"discard",copy2 );
read (BRD,"discard",veccopy2 );
std::cout << "Loaded (bin) -----------------" << std::endl;
std::cout << copy2 << std::endl << veccopy2 << std::endl;
}
//// text
{
TextWriter TWR("bother.txt");
write(TWR,"discard",copy1 );
write(TWR,"discard",veccopy1 );
}
{
TextReader TRD("bother.txt");
read (TRD,"discard",copy3 );
read (TRD,"discard",veccopy3 );
std::cout << "Loaded (txt) -----------------" << std::endl;
std::cout << copy3 << std::endl << veccopy3 << std::endl;
}
std::vector<int> iv = strToVec<int>("1 2 2 4");
std::vector<std::string> sv = strToVec<std::string>("bli bla blu");
for (auto &e: iv)
{
std::cout << e << " ";
}
std::cout << std::endl;
for (auto &e: sv)
{
std::cout << e << " ";
}
std::cout << std::endl;
}