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Got command line args working

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Peter Boyle 2015-05-11 14:36:48 +01:00
parent 4eb08ac9de
commit b613ed0bb8
17 changed files with 2827 additions and 3407 deletions
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385
Makefile.in
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@ -1,9 +1,8 @@
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# 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
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# gives unlimited permission to copy and/or distribute it, # gives unlimited permission to copy and/or distribute it,
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@ -15,6 +14,61 @@
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@ -96,10 +193,14 @@ am__relativize = \
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@ -139,6 +240,7 @@ PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
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@ -196,7 +298,7 @@ SUBDIRS = lib tests benchmarks
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@ -345,15 +399,11 @@ TAGS: tags-recursive $(HEADERS) $(SOURCES) $(TAGS_DEPENDENCIES) \
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xz -dc $(distdir).tar.xz | $(am__untar) ;;\ xz -dc $(distdir).tar.xz | $(am__untar) ;;\
*.tar.Z*) \ *.tar.Z*) \
@ -486,17 +561,19 @@ distcheck: dist
*.zip*) \ *.zip*) \
unzip $(distdir).zip ;;\ unzip $(distdir).zip ;;\
esac esac
chmod -R a-w $(distdir); chmod u+w $(distdir) chmod -R a-w $(distdir)
mkdir $(distdir)/_build chmod u+w $(distdir)
mkdir $(distdir)/_inst mkdir $(distdir)/_build $(distdir)/_build/sub $(distdir)/_inst
chmod a-w $(distdir) chmod a-w $(distdir)
test -d $(distdir)/_build || exit 0; \ test -d $(distdir)/_build || exit 0; \
dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \ dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
&& dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \ && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
&& am__cwd=`pwd` \ && am__cwd=`pwd` \
&& $(am__cd) $(distdir)/_build \ && $(am__cd) $(distdir)/_build/sub \
&& ../configure --srcdir=.. --prefix="$$dc_install_base" \ && ../../configure \
$(AM_DISTCHECK_CONFIGURE_FLAGS) \
$(DISTCHECK_CONFIGURE_FLAGS) \ $(DISTCHECK_CONFIGURE_FLAGS) \
--srcdir=../.. --prefix="$$dc_install_base" \
&& $(MAKE) $(AM_MAKEFLAGS) \ && $(MAKE) $(AM_MAKEFLAGS) \
&& $(MAKE) $(AM_MAKEFLAGS) dvi \ && $(MAKE) $(AM_MAKEFLAGS) dvi \
&& $(MAKE) $(AM_MAKEFLAGS) check \ && $(MAKE) $(AM_MAKEFLAGS) check \
@ -519,13 +596,21 @@ distcheck: dist
&& $(MAKE) $(AM_MAKEFLAGS) distcleancheck \ && $(MAKE) $(AM_MAKEFLAGS) distcleancheck \
&& cd "$$am__cwd" \ && cd "$$am__cwd" \
|| exit 1 || exit 1
$(am__remove_distdir) $(am__post_remove_distdir)
@(echo "$(distdir) archives ready for distribution: "; \ @(echo "$(distdir) archives ready for distribution: "; \
list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \ list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \
sed -e 1h -e 1s/./=/g -e 1p -e 1x -e '$$p' -e '$$x' sed -e 1h -e 1s/./=/g -e 1p -e 1x -e '$$p' -e '$$x'
distuninstallcheck: distuninstallcheck:
@$(am__cd) '$(distuninstallcheck_dir)' \ @test -n '$(distuninstallcheck_dir)' || { \
&& test `$(distuninstallcheck_listfiles) | wc -l` -le 1 \ echo 'ERROR: trying to run $@ with an empty' \
'$$(distuninstallcheck_dir)' >&2; \
exit 1; \
}; \
$(am__cd) '$(distuninstallcheck_dir)' || { \
echo 'ERROR: cannot chdir into $(distuninstallcheck_dir)' >&2; \
exit 1; \
}; \
test `$(am__distuninstallcheck_listfiles) | wc -l` -eq 0 \
|| { echo "ERROR: files left after uninstall:" ; \ || { echo "ERROR: files left after uninstall:" ; \
if test -n "$(DESTDIR)"; then \ if test -n "$(DESTDIR)"; then \
echo " (check DESTDIR support)"; \ echo " (check DESTDIR support)"; \
@ -556,10 +641,15 @@ install-am: all-am
installcheck: installcheck-recursive installcheck: installcheck-recursive
install-strip: install-strip:
if test -z '$(STRIP)'; then \
$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
`test -z '$(STRIP)' || \ install; \
echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install else \
$(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
"INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
fi
mostlyclean-generic: mostlyclean-generic:
clean-generic: clean-generic:
@ -640,23 +730,24 @@ ps-am:
uninstall-am: uninstall-am:
.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) ctags-recursive \ .MAKE: $(am__recursive_targets) install-am install-strip
install-am install-strip tags-recursive
.PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \ .PHONY: $(am__recursive_targets) CTAGS GTAGS TAGS all all-am \
all all-am am--refresh check check-am clean clean-generic \ am--refresh check check-am clean clean-cscope clean-generic \
ctags ctags-recursive dist dist-all dist-bzip2 dist-gzip \ cscope cscopelist-am ctags ctags-am dist dist-all dist-bzip2 \
dist-lzma dist-shar dist-tarZ dist-xz dist-zip distcheck \ dist-gzip dist-lzip dist-shar dist-tarZ dist-xz dist-zip \
distclean distclean-generic distclean-tags distcleancheck \ distcheck distclean distclean-generic distclean-tags \
distdir distuninstallcheck dvi dvi-am html html-am info \ distcleancheck distdir distuninstallcheck dvi dvi-am html \
info-am install install-am install-data install-data-am \ html-am info info-am install install-am install-data \
install-dvi install-dvi-am install-exec install-exec-am \ install-data-am install-dvi install-dvi-am install-exec \
install-html install-html-am install-info install-info-am \ install-exec-am install-html install-html-am install-info \
install-man install-pdf install-pdf-am install-ps \ install-info-am install-man install-pdf install-pdf-am \
install-ps-am install-strip installcheck installcheck-am \ install-ps install-ps-am install-strip installcheck \
installdirs installdirs-am maintainer-clean \ installcheck-am installdirs installdirs-am maintainer-clean \
maintainer-clean-generic mostlyclean mostlyclean-generic pdf \ maintainer-clean-generic mostlyclean mostlyclean-generic pdf \
pdf-am ps ps-am tags tags-recursive uninstall uninstall-am pdf-am ps ps-am tags tags-am uninstall uninstall-am
.PRECIOUS: Makefile
# Tell versions [3.59,3.63) of GNU make to not export all variables. # Tell versions [3.59,3.63) of GNU make to not export all variables.

577
aclocal.m4 vendored
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File diff suppressed because it is too large Load Diff

2
benchmarks/Grid_comms.cc
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@ -12,7 +12,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
int Nloop=10; int Nloop=10;
int nmu=0; int nmu=0;

2
benchmarks/Grid_memory_bandwidth.cc
View File

@ -12,7 +12,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,tmp_latt_size); GridParseLayout(argv,argc,tmp_latt_size,simd_layout,mpi_layout);
const int Nvec=8; const int Nvec=8;
typedef Lattice< iVector< vReal,Nvec> > LatticeVec; typedef Lattice< iVector< vReal,Nvec> > LatticeVec;

2
benchmarks/Grid_wilson.cc
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@ -24,7 +24,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
GridCartesian Grid(latt_size,simd_layout,mpi_layout); GridCartesian Grid(latt_size,simd_layout,mpi_layout);
std::vector<int> seeds({1,2,3,4}); std::vector<int> seeds({1,2,3,4});

4853
configure vendored
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File diff suppressed because it is too large Load Diff

6
lib/Grid.h
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@ -73,7 +73,11 @@ namespace Grid {
std::string GridCmdOptionPayload(char ** begin, char ** end, const std::string & option); std::string GridCmdOptionPayload(char ** begin, char ** end, const std::string & option);
bool GridCmdOptionExists(char** begin, char** end, const std::string& option); bool GridCmdOptionExists(char** begin, char** end, const std::string& option);
void GridParseIntVector(std::string &str,std::vector<int> & vec); void GridParseIntVector(std::string &str,std::vector<int> & vec);
void GridParseLayout(char **argv,int argc,std::vector<int> &mpi,std::vector<int> &simd,std::vector<int> &latt);
void GridParseLayout(char **argv,int argc,
std::vector<int> &simd,
std::vector<int> &latt,
std::vector<int> &mpi);
}; };

23
lib/Grid_config.h
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@ -2,42 +2,42 @@
/* lib/Grid_config.h.in. Generated from configure.ac by autoheader. */ /* lib/Grid_config.h.in. Generated from configure.ac by autoheader. */
/* AVX */ /* AVX */
/* #undef AVX1 */ #define AVX1 1
/* AVX2 */ /* AVX2 */
/* #undef AVX2 */ /* #undef AVX2 */
/* AVX512 */ /* AVX512 */
#define AVX512 1 /* #undef AVX512 */
/* GRID_COMMS_MPI */ /* GRID_COMMS_MPI */
/* #undef GRID_COMMS_MPI */ #define GRID_COMMS_MPI 1
/* GRID_COMMS_NONE */ /* GRID_COMMS_NONE */
#define GRID_COMMS_NONE 1 /* #undef GRID_COMMS_NONE */
/* Define to 1 if you have the declaration of `be64toh', and to 0 if you /* Define to 1 if you have the declaration of `be64toh', and to 0 if you
don't. */ don't. */
#define HAVE_DECL_BE64TOH 1 #define HAVE_DECL_BE64TOH 0
/* Define to 1 if you have the declaration of `ntohll', and to 0 if you don't. /* Define to 1 if you have the declaration of `ntohll', and to 0 if you don't.
*/ */
#define HAVE_DECL_NTOHLL 0 #define HAVE_DECL_NTOHLL 1
/* Define to 1 if you have the <endian.h> header file. */ /* Define to 1 if you have the <endian.h> header file. */
#define HAVE_ENDIAN_H 1 /* #undef HAVE_ENDIAN_H */
/* Define to 1 if you have the `gettimeofday' function. */ /* Define to 1 if you have the `gettimeofday' function. */
/* #undef HAVE_GETTIMEOFDAY */ #define HAVE_GETTIMEOFDAY 1
/* Define to 1 if you have the <inttypes.h> header file. */ /* Define to 1 if you have the <inttypes.h> header file. */
#define HAVE_INTTYPES_H 1 #define HAVE_INTTYPES_H 1
/* Define to 1 if you have the <malloc.h> header file. */ /* Define to 1 if you have the <malloc.h> header file. */
#define HAVE_MALLOC_H 1 /* #undef HAVE_MALLOC_H */
/* Define to 1 if you have the <malloc/malloc.h> header file. */ /* Define to 1 if you have the <malloc/malloc.h> header file. */
/* #undef HAVE_MALLOC_MALLOC_H */ #define HAVE_MALLOC_MALLOC_H 1
/* Define to 1 if you have the <memory.h> header file. */ /* Define to 1 if you have the <memory.h> header file. */
#define HAVE_MEMORY_H 1 #define HAVE_MEMORY_H 1
@ -78,6 +78,9 @@
/* Define to the one symbol short name of this package. */ /* Define to the one symbol short name of this package. */
#define PACKAGE_TARNAME "grid" #define PACKAGE_TARNAME "grid"
/* Define to the home page for this package. */
#define PACKAGE_URL ""
/* Define to the version of this package. */ /* Define to the version of this package. */
#define PACKAGE_VERSION "1.0" #define PACKAGE_VERSION "1.0"

3
lib/Grid_config.h.in
View File

@ -77,6 +77,9 @@
/* Define to the one symbol short name of this package. */ /* Define to the one symbol short name of this package. */
#undef PACKAGE_TARNAME #undef PACKAGE_TARNAME
/* Define to the home page for this package. */
#undef PACKAGE_URL
/* Define to the version of this package. */ /* Define to the version of this package. */
#undef PACKAGE_VERSION #undef PACKAGE_VERSION

45
lib/Grid_init.cc
View File

@ -76,54 +76,57 @@ void GridCmdOptionIntVector(std::string &str,std::vector<int> & vec)
return; return;
} }
void GridParseLayout(char **argv,int argc,std::vector<int> &mpi,std::vector<int> &simd,std::vector<int> &latt) void GridParseLayout(char **argv,int argc,
std::vector<int> &latt,
std::vector<int> &simd,
std::vector<int> &mpi)
{ {
mpi =std::vector<int>({1,1,1,1}); mpi =std::vector<int>({1,1,1,1});
#if defined(AVX) || defined (AVX2) latt=std::vector<int>({8,8,8,8});
simd=std::vector<int>({1,1,2,2});
#endif
#if defined(SSE4) #if defined(SSE4)
simd=std::vector<int>({1,1,1,2}); simd=std::vector<int>({1,1,1,2});
#endif #endif
#if defined(AVX1) || defined (AVX2)
simd=std::vector<int>({1,1,2,2});
#endif
#if defined(AVX512) #if defined(AVX512)
simd=std::vector<int>({1,2,2,2}); simd=std::vector<int>({1,2,2,2});
#endif #endif
latt=std::vector<int>({8,8,8,8});
std::string arg; std::string arg;
if( GridCmdOptionExists(argv,argv+argc,"--mpi-layout") ){ if( GridCmdOptionExists(argv,argv+argc,"--mpi") ){
arg = GridCmdOptionPayload(argv,argv+argc,"--mpi-layout"); arg = GridCmdOptionPayload(argv,argv+argc,"--mpi");
GridCmdOptionIntVector(arg,mpi); GridCmdOptionIntVector(arg,mpi);
} std::cout<<"MPI ";
if( GridCmdOptionExists(argv,argv+argc,"--simd-layout") ){
arg= GridCmdOptionPayload(argv,argv+argc,"--simd-layout");
GridCmdOptionIntVector(arg,simd);
}
if( GridCmdOptionExists(argv,argv+argc,"--lattice") ){
arg= GridCmdOptionPayload(argv,argv+argc,"--lattice");
GridCmdOptionIntVector(arg,latt);
}
std::cout<<"MPI layout";
for(int i=0;i<mpi.size();i++){ for(int i=0;i<mpi.size();i++){
std::cout<<mpi[i]<<" "; std::cout<<mpi[i]<<" ";
} }
std::cout<<std::endl; std::cout<<std::endl;
}
std::cout<<"SIMD layout"; if( GridCmdOptionExists(argv,argv+argc,"--simd") ){
arg= GridCmdOptionPayload(argv,argv+argc,"--simd");
GridCmdOptionIntVector(arg,simd);
std::cout<<"SIMD ";
for(int i=0;i<simd.size();i++){ for(int i=0;i<simd.size();i++){
std::cout<<simd[i]<<" "; std::cout<<simd[i]<<" ";
} }
std::cout<<std::endl; std::cout<<std::endl;
}
if( GridCmdOptionExists(argv,argv+argc,"--grid") ){
arg= GridCmdOptionPayload(argv,argv+argc,"--grid");
GridCmdOptionIntVector(arg,latt);
std::cout<<"Grid "; std::cout<<"Grid ";
for(int i=0;i<latt.size();i++){ for(int i=0;i<latt.size();i++){
std::cout<<latt[i]<<" "; std::cout<<latt[i]<<" ";
} }
std::cout<<std::endl; std::cout<<std::endl;
} }
}
void Grid_finalize(void) void Grid_finalize(void)
{ {
#ifdef GRID_COMMS_MPI #ifdef GRID_COMMS_MPI

6
lib/math/Grid_math_tensors.h
View File

@ -18,7 +18,7 @@ namespace Grid {
// //
class GridTensorBase {}; class GridTensorBase {};
template<class vtype> class iScalar :public GridTensorBase template<class vtype> class iScalar
{ {
public: public:
vtype _internal; vtype _internal;
@ -105,7 +105,7 @@ template<class vtype> inline auto TensorRemove(iScalar<vtype> arg) -> decltype(T
return TensorRemove(arg._internal); return TensorRemove(arg._internal);
} }
template<class vtype,int N> class iVector :public GridTensorBase template<class vtype,int N> class iVector
{ {
public: public:
vtype _internal[N]; vtype _internal[N];
@ -175,7 +175,7 @@ public:
// } // }
}; };
template<class vtype,int N> class iMatrix :public GridTensorBase template<class vtype,int N> class iMatrix
{ {
public: public:
vtype _internal[N][N]; vtype _internal[N][N];

6
tests/Grid_cshift.cc
View File

@ -11,11 +11,11 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
std::vector<int> latt_size; std::vector<int> latt_size;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size);
GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
GridCartesian Fine(latt_size,simd_layout,mpi_layout); GridCartesian Fine(latt_size,simd_layout,mpi_layout);
GridParallelRNG FineRNG(&Fine);
FineRNG.SeedRandomDevice(); GridParallelRNG FineRNG(&Fine); FineRNG.SeedRandomDevice();
LatticeComplex U(&Fine); LatticeComplex U(&Fine);
LatticeComplex ShiftU(&Fine); LatticeComplex ShiftU(&Fine);

2
tests/Grid_gamma.cc
View File

@ -18,7 +18,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
GridCartesian Grid(latt_size,simd_layout,mpi_layout); GridCartesian Grid(latt_size,simd_layout,mpi_layout);

2
tests/Grid_main.cc
View File

@ -29,7 +29,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
latt_size.resize(4); latt_size.resize(4);
#ifdef AVX512 #ifdef AVX512

2
tests/Grid_nersc_io.cc
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@ -14,7 +14,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,tmp_latt_size); GridParseLayout(argv,argc,tmp_latt_size,simd_layout,mpi_layout);
std::vector<int> latt_size ({16,16,16,32}); std::vector<int> latt_size ({16,16,16,32});
std::vector<int> clatt_size ({4,4,4,8}); std::vector<int> clatt_size ({4,4,4,8});

2
tests/Grid_simd.cc
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@ -110,7 +110,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
GridCartesian Grid(latt_size,simd_layout,mpi_layout); GridCartesian Grid(latt_size,simd_layout,mpi_layout);
std::vector<int> seeds({1,2,3,4}); std::vector<int> seeds({1,2,3,4});

2
tests/Grid_stencil.cc
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@ -12,7 +12,7 @@ int main (int argc, char ** argv)
std::vector<int> simd_layout; std::vector<int> simd_layout;
std::vector<int> mpi_layout; std::vector<int> mpi_layout;
GridParseLayout(argv,argc,mpi_layout,simd_layout,latt_size); GridParseLayout(argv,argc,latt_size,simd_layout,mpi_layout);
double volume = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3]; double volume = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];