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	Merge remote-tracking branch 'paboyle/feature/hadrons' into feature/hadrons
# Conflicts: # extras/Hadrons/Modules/MContraction/Meson.hpp # tests/hadrons/Test_hadrons_meson_3pt.cc Updated Meson.hpp to utilise zero-flop gamma matrices.
This commit is contained in:
		@@ -37,17 +37,17 @@ See the full license in the file "LICENSE" in the top level distribution directo
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#include <Grid/Hadrons/ModuleFactory.hpp>
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namespace Grid {
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    // Overload >> to extract gamma pair from "[g1 g2]" string.
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    // Overload >> to extract gamma pair from "<g1 g2>" string.
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    template <typename T1, typename T2>
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    inline std::istringstream &operator>>(std::istringstream &sstr,
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                                          std::pair<T1, T2> &buf)
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    {
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        T1 buf1;
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        T2 buf2;
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        unsigned int buf1;
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        unsigned int buf2;
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        char c;
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        sstr >> c >> buf1 >> buf2 >> c;
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        sstr.peek();
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        buf = std::make_pair(buf1, buf2);
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        buf = std::make_pair((T1)buf1, (T2)buf2);
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        return sstr;
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    }
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}
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@@ -76,7 +76,7 @@ BEGIN_HADRONS_NAMESPACE
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 ******************************************************************************/
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BEGIN_MODULE_NAMESPACE(MContraction)
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typedef std::pair<unsigned int, unsigned int> GammaPair;
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typedef std::pair<Gamma::Algebra, Gamma::Algebra> GammaPair;
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class MesonPar: Serializable
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{
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@@ -99,8 +99,8 @@ public:
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    {
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    public:
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        GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
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                                        unsigned int, gamma_snk,
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                                        unsigned int, gamma_src,
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                                        Gamma::Algebra, gamma_snk,
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                                        Gamma::Algebra, gamma_src,
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                                        std::vector<Complex>, corr);
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    };
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public:
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@@ -151,13 +151,14 @@ void TMeson<FImpl1, FImpl2>::parseGammaString(std::vector<GammaPair> &gammaList)
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    if (par().gammas.compare("all") == 0)
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    {
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        // Do all contractions.
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        unsigned int n_gam = Ns*Ns;
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        unsigned int n_gam = Ns * Ns;
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        gammaList.resize(n_gam*n_gam);
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        for (unsigned int i = 0; i < n_gam; ++i)
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        for (unsigned int i = 1; i < Gamma::nGamma; i += 2)
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        {
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            for (unsigned int j = 0; j < n_gam; ++j)
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            for (unsigned int j = 1; j < Gamma::nGamma; j += 2)
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            {
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                gammaList.push_back(std::make_pair(i, j));
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                gammaList.push_back(std::make_pair((Gamma::Algebra)i, 
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                                                   (Gamma::Algebra)j));
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            }
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        }
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    }
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@@ -181,7 +182,7 @@ void TMeson<FImpl1, FImpl2>::execute(void)
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    PropagatorField1       &q1 = *env().template getObject<PropagatorField1>(par().q1);
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    PropagatorField2       &q2 = *env().template getObject<PropagatorField2>(par().q2);
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    LatticeComplex         c(env().getGrid());
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    SpinMatrix             g[Ns*Ns], g5;
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    Gamma                  g5(Gamma::Algebra::Gamma5);
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    std::vector<GammaPair> gammaList;
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    std::vector<TComplex>  buf;
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    std::vector<Result>    result;
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@@ -198,17 +199,14 @@ void TMeson<FImpl1, FImpl2>::execute(void)
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    }
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    ph = exp(-2*M_PI*i*ph);
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    g5 = makeGammaProd(Ns*Ns - 1);
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    for (int i = 0; i < Ns*Ns; ++i)
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    {
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        g[i] = makeGammaProd(i);
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    }
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    parseGammaString(gammaList);
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    result.resize(gammaList.size());
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    for (unsigned int i = 0; i < result.size(); ++i)
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    {
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        c = trace(g[gammaList[i].first]*q1*g[gammaList[i].second]*g5*adj(q2)*g5*ph);
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        Gamma gSnk(gammaList[i].first);
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        Gamma gSrc(gammaList[i].second);
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        c = trace((g5*gSnk)*q1*(gSrc*g5)*adj(q2))*ph;
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        sliceSum(c, buf, Tp);
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        result[i].gamma_snk = gammaList[i].first;
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@@ -61,11 +61,11 @@ class SeqGammaPar: Serializable
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{
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public:
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    GRID_SERIALIZABLE_CLASS_MEMBERS(SeqGammaPar,
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                                    std::string,  q,
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                                    unsigned int, tA,
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                                    unsigned int, tB,
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                                    unsigned int, gamma,
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                                    std::string,  mom);
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                                    std::string,    q,
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                                    unsigned int,   tA,
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                                    unsigned int,   tB,
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                                    Gamma::Algebra, gamma,
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                                    std::string,    mom);
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};
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template <typename FImpl>
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@@ -141,11 +141,10 @@ void TSeqGamma<FImpl>::execute(void)
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    PropagatorField &q   = *env().template getObject<PropagatorField>(par().q);
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    Lattice<iScalar<vInteger>> t(env().getGrid());
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    LatticeComplex             ph(env().getGrid()), coor(env().getGrid());
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    SpinMatrix                 g;
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    Gamma                      g(par().gamma);
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    std::vector<Real>          p;
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    Complex                    i(0.0,1.0);
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    g  = makeGammaProd(par().gamma);
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    p  = strToVec<Real>(par().mom);
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    ph = zero;
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    for(unsigned int mu = 0; mu < env().getNd(); mu++)
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@@ -155,7 +154,7 @@ void TSeqGamma<FImpl>::execute(void)
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    }
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    ph = exp(2*M_PI*i*ph);
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    LatticeCoordinate(t, Tp);
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    src = where((t >= par().tA) and (t <= par().tB), g*ph*q, 0.*q);
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    src = where((t >= par().tA) and (t <= par().tB), ph*(g*q), 0.*q);
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}
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END_MODULE_NAMESPACE
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