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Commit Graph

28 Commits

Author SHA1 Message Date
paboyle
27ea2afe86 No compile on comms == none fix 2017-10-30 01:14:11 +00:00
paboyle
1ef424b139 Split grid Y2K bug fix attempt 2017-10-27 14:20:35 +01:00
Guido Cossu
8309f2364b Solving again the MPI comm bug with FFTs 2017-10-25 10:24:14 +01:00
paboyle
07009c569a Comms splitting improvements 2017-10-09 23:16:51 +01:00
paboyle
1feddf4ba6 const fixes 2017-06-22 19:32:41 +01:00
paboyle
6ebf9f15b7 Splitting communicators first cut 2017-06-22 08:14:34 +01:00
paboyle
3bfd1f13e6 I/O improvements 2017-06-11 23:14:10 +01:00
paboyle
4b17e8eba8 Merge branch 'develop' into feature/bgq-asm
Conflicts:
	lib/qcd/action/fermion/Fermion.h
	lib/qcd/action/fermion/WilsonFermion.cc
	lib/util/Init.cc
	tests/Test_cayley_even_odd_vec.cc
2017-03-28 04:49:30 -04:00
paboyle
18bde08d1b Merge branch 'feature/staggering' into develop 2017-03-28 15:25:55 +09:00
paboyle
4e7ab3166f Refactoring header layout 2017-02-22 18:09:33 +00:00
fad743fbb1 Build system sanity check: corrected several headers not in the <Grid/*> format 2017-01-26 17:00:41 -08:00
Azusa Yamaguchi
668ca57702 Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering 2016-11-22 13:49:11 +00:00
azusayamaguchi
f85b35314d Fix a routine for single node processor coor from rank 2016-11-08 11:49:13 +00:00
Azusa Yamaguchi
ee686a7d85 Compiles now 2016-11-03 16:58:23 +00:00
paboyle
791cb050c8 Comms improvements 2016-11-01 11:35:43 +00:00
azusayamaguchi
7c3363b91e Compiles all comms targets 2016-10-25 00:04:17 +01:00
azusayamaguchi
b94478fa51 mpi, mpi3, shmem all compile.
mpi, mpi3 pass single node multi-rank
2016-10-24 23:45:31 +01:00
azusayamaguchi
b6a65059a2 Update to use shared memory to contain the stencil comms buffers
Tested on 2.1.1.1 1.2.1.1 4.1.1.1 1.4.1.1 2.2.1.1 subnode decompositions
2016-10-24 17:30:43 +01:00
azusayamaguchi
c190221fd3 Internal SHM comms in non-simd directions working
Need to fix simd directions
2016-10-22 18:14:27 +01:00
paboyle
32bc7a6ab8 MPI back out of change that hangs
AVX2 for clang, gcc needs the -mfma flag.
2016-08-05 10:36:00 +01:00
paboyle
ef97e32152 Adding persistent communicators 2016-07-08 17:16:08 +01:00
paboyle
d6b64f47d9 Uint64 sum for IO rates 2016-03-16 02:27:22 -07:00
paboyle
e55c35734b Fix a nocompile 2016-03-03 20:33:28 +00:00
paboyle
a3fbabf404 Bug fix 2016-02-18 18:08:24 +00:00
Peter Boyle
41c2b09184 Shmem comms [NO MPI] target added. The dwf test runs and passes.
Not really shaken out to my satisfaction though as I want more tests done, so don't declare as working.
But committing my current while I try a few experimentals.
2016-02-14 14:24:38 -06:00
paboyle
aae8bf31a7 Global edit adding copyright and license info to every source file. 2016-01-02 14:51:32 +00:00
Peter Boyle
dc814f30da Binary IO file for generic Grid array parallel I/O.
Number of IO MPI tasks can be varied by selecting which
dimensions use parallel IO and which dimensions use Serial send to boss
I/O.

Thus can neck down from, say 1024 nodes = 4x4x8x8 to {1,8,32,64,128,256,1024} nodes
doing the I/O.

Interpolates nicely between ALL nodes write their data, a single boss per time-plane
in processor space [old UKQCD fortran code did this], and a single node doing all I/O.

Not sure I have the transfer sizes big enough and am not overly convinced fstream
is guaranteed to not give buffer inconsistencies unless I set streambuf size to zero.

Practically it has worked on 8 tasks, 2x1x2x2 writing /cloning NERSC configurations
on my MacOS + OpenMPI and Clang environment.

It is VERY easy to switch to pwrite at a later date, and also easy to send x-strips around from
each node in order to gather bigger chunks at the syscall level.

That would push us up to the circa 8x 18*4*8 == 4KB size write chunk, and by taking, say, x/y non
parallel we get to 16MB contiguous chunks written in multi 4KB transactions
per IOnode in 64^3 lattices for configuration I/O.

I suspect this is fine for system performance.
2015-08-26 13:40:29 +01:00
Peter Boyle
1d0df449e8 Reorganise of file naming 2015-06-03 12:47:05 +01:00