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1931 Commits

Author SHA1 Message Date
paboyle
f246fe3304 Improvements to avx for invertible to avoid latent bug 2017-02-16 23:52:44 +00:00
paboyle
8a29c16bde Faster gather exchange 2017-02-16 23:52:22 +00:00
paboyle
d68907fc3e Debug temp 2017-02-16 18:51:35 -05:00
paboyle
5c0adf7bf2 Make clang happy with parenthesis 2017-02-16 23:51:33 +00:00
paboyle
be3a8249c6 Faster gather 2017-02-16 23:51:15 +00:00
paboyle
bd600702cf Vectorise the XYZT face gathering better. 
Hard coded for simd_layout <= 2 in any given spread out direction; full generality is inconsistent
with efficiency.
 2017-02-15 11:11:04 +00:00
Guido Cossu
bafb101e4f Testing different versions of the Laplacian 2017-02-13 15:38:11 +00:00
Guido Cossu
08fdf05528 Added and tested the covariant laplacian + CG solver 2017-02-13 15:05:01 +00:00
paboyle
aca7a3ef0a Optimisation control improvements 2017-02-10 18:22:31 -05:00
Guido Cossu
c3d7ec65fa All tests compile. 2017-02-10 10:27:51 +00:00
Guido Cossu
e0571c872b Merge branch 'develop' into feature/hmc_generalise 2017-02-09 16:12:00 +00:00
Guido Cossu
84687ccf1f Handling an Intel compiler warning for Json class 2017-02-09 15:33:33 +00:00
Guido Cossu
3274561cf8 Cleanup 2017-02-09 15:18:38 +00:00
paboyle
2c246551d0 Overlap comms and compute options in wilson kernels 2017-02-07 01:37:10 -05:00
paboyle
71ac2e7940 Faster RNG init 2017-02-07 01:33:23 -05:00
paboyle
a48ee6f0f2 Don't use MPI3_leader any more. No real gain and complex 2017-02-07 01:31:24 -05:00
paboyle
73547cca66 MPI3 working i think 2017-02-07 01:30:02 -05:00
paboyle
123c673db7 Policy to control async or sync SendRecv 2017-02-07 01:24:54 -05:00
paboyle
61f82216e2 Communicator Policy, NodeCount distinct from Rank count 2017-02-07 01:22:53 -05:00
paboyle
8e7ca92278 Debugged cshift case 2017-02-07 01:21:32 -05:00
paboyle
485ad6fde0 Stencil working in SHM MPI3 2017-02-07 01:20:39 -05:00
paboyle
6ea2184e18 OMP define change 2017-02-07 01:17:16 -05:00
paboyle
fdc170b8a3 Parallel fors in lattice transfer 2017-02-07 01:16:39 -05:00
paboyle
85c7bc4321 Bug fixes for cases that physics code couldn't hit but latent 
and discovered on KNL (long vector, y SIMD dir) and checker dir set to y.
Remove the assertions on these code paths now they are tested.
 2017-02-07 01:01:15 -05:00
paboyle
0883d6a7ce Overlap comms compute support; make reg naming consistent with bgq aasm 2017-02-07 00:59:32 -05:00
paboyle
b5e9c900a4 Better printing and signal handling options 2017-02-07 00:57:55 -05:00
paboyle
4bbdfb434c Overlap comms compute modifications 2017-02-07 00:57:01 -05:00
Lanny91
b7cd1a19e3 Utilities for reading and writing "pair" objects. 2017-02-06 14:08:59 +00:00
Christopher Kelly
c94133af49 Added iteration reporting to CG and mixed CG 
Added ability to manually change the initial CG inner tolerance in mixed CG
Added .hpp files to filelist script
 2017-02-02 17:04:42 -05:00
Antonin Portelli
eedcaf6470 Merge branch 'feature/hadrons' into feature/qed-fvol 2017-02-01 15:53:10 -08:00
Antonin Portelli
e7d8030a64 operator>> for serialisable enums 2017-02-01 15:51:08 -08:00
Antonin Portelli
d775fbb2f9 Gammas: code cleaning and gamma_L implementation & test 2017-02-01 15:45:05 -08:00
Antonin Portelli
863855f46f header fix 2017-02-01 11:59:44 -08:00
Antonin Portelli
419af7610d New gamma matrices tidying: generated code is confined to Gamma.* for readability 2017-02-01 11:23:12 -08:00
Antonin Portelli
1140573027 Gamma adj fix: now in Grid namespace to avoid collisions 2017-01-30 10:53:04 -08:00
Antonin Portelli
a0cfbb6e88 Merge branch 'feature/gammas' into feature/hadrons 
# Conflicts:
#	.gitignore
#	lib/qcd/spin/Dirac.cc
#	scripts/filelist
 2017-01-30 09:10:49 -08:00
Antonin Portelli
515a26b3c6 gammas: copyright update 2017-01-30 09:07:09 -08:00
Guido Cossu
16be6d378c Now action factory support different Fields (templated) 2017-01-30 14:22:41 +00:00
Guido Cossu
f05d0565aa Adding ScalarField theory 2017-01-30 10:59:28 +00:00
Antonin Portelli
28d99b5297 Merge branch 'develop' into feature/qed-fvol 2017-01-27 16:59:53 -08:00
Guido Cossu
899e685627 Merge branch 'feature/sitmo_rng' into develop 2017-01-27 14:15:56 +00:00
Guido Cossu
6929a84c70 Reformatting files 2017-01-27 11:54:44 +00:00
Guido Cossu
5c779a789b Moving registrations in an independent file 2017-01-27 11:23:51 +00:00
Antonin Portelli
fad743fbb1 Build system sanity check: corrected several headers not in the <Grid/*> format 2017-01-26 17:00:41 -08:00
Guido Cossu
e863a948e3 Cleaning up files and directories 2017-01-26 15:24:49 +00:00
Guido Cossu
7996f06335 Commented out registrations. 
Move to an independent file that is linked only for the factory managed HMC
 2017-01-25 18:27:45 +00:00
Guido Cossu
ef8d3831eb Temporary patch the threading error in InsertSlice and ExtractSlice 
Find source and fix the error
 2017-01-25 18:12:04 +00:00
Guido Cossu
70ed9fc40c Updating the engine to the last version 2017-01-25 18:10:41 +00:00
Guido Cossu
7b40a3e3e5 Reorganizing files 2017-01-25 18:09:46 +00:00
Guido Cossu
677757cfeb Added and tested SITMO PRNG 2017-01-25 12:47:22 +00:00
Guido Cossu
f7fbbaaca3 Compiles after merging 2017-01-25 12:11:58 +00:00
Guido Cossu
17629b8d9e Merge branch 'develop' into feature/hmc_generalise 2017-01-25 11:33:53 +00:00
Guido Cossu
0baa20d292 Againg fixing compilation on Travis, no LIME lib present 2017-01-25 11:18:44 +00:00
Guido Cossu
4571c918a4 Fixing compilation error when compiling without LIME 2017-01-25 11:14:43 +00:00
Guido Cossu
5251ea4d30 Adding more fermion action modules, generalised DWF 2017-01-25 11:10:44 +00:00
Antonin Portelli
05cb6d318a gammas: adjoint implemented as a symbolic operation 2017-01-24 18:07:43 -08:00
Antonin Portelli
0432e30256 Gamma right multiply code fix (now passes consistency check) 2017-01-24 17:36:23 -08:00
Antonin Portelli
f7db342f49 Serialisable enums can be converted to int 2017-01-24 17:33:26 -08:00
Guido Cossu
7f456b4173 👷 Added all pseudofermion actions to the serialiser 2017-01-24 13:57:32 +00:00
Antonin Portelli
a37e71f362 New automatic implementation of gamma matrices, Meson and SeqGamma are broken 2017-01-23 19:13:43 -08:00
Guido Cossu
244f8fb6dc Added JSON parser (without NextElement) 2017-01-23 14:57:38 +00:00
Antonin Portelli
37988221a8 Merge branch 'feature/serialisation-hdf5' into feature/qed-fvol 2017-01-20 14:04:20 -08:00
Antonin Portelli
4c75095c61 HDF5: header fix 2017-01-20 12:14:01 -08:00
Antonin Portelli
afa095d33d HDF5: better complex number support 2017-01-20 12:10:41 -08:00
Antonin Portelli
6b5259cc10 HDF5 detects if a name is a dataset or not without using exception catching 2017-01-20 11:03:19 -08:00
Guido Cossu
27dfe816fa Added TwoFlavorsEO 
Had to remove a conformability check in the Derivative of SchurDiff,
see the comments in the file
 2017-01-20 16:59:31 +00:00
Guido Cossu
f96fac0aee All functionalities ready. 
Todo: add all the fermion action modules
 2017-01-20 12:56:20 +00:00
Antonin Portelli
7423a352c5 HDF5: typos 2017-01-19 18:33:04 -08:00
Antonin Portelli
81e66d6631 HDF5: revert back to native types 2017-01-19 18:24:53 -08:00
Antonin Portelli
ade1058e5f Hdf5Type does not need to be a pointer anymore 2017-01-19 18:23:55 -08:00
Antonin Portelli
6eea9e4da7 HDF5 types static initialisation is mysteriously buggy on BG/Q, changing strategy 2017-01-19 18:02:53 -08:00
Antonin Portelli
2c673666da Standardisation of HDF5 types 2017-01-19 17:19:12 -08:00
Antonin Portelli
7a327a3f28 Merge branch 'develop' into feature/qed-fvol 2017-01-19 14:22:36 -08:00
Guido Cossu
851f2ad8ef Adding fermions actions support in the factories 2017-01-19 10:00:02 +00:00
Antonin Portelli
5405526424 Code typo 2017-01-18 22:42:19 -08:00
Antonin Portelli
654e0b0fd0 Serialisable object are now comparable with == 2017-01-18 17:40:32 -08:00
Antonin Portelli
4be08ebccc debug code cleaning 2017-01-18 17:39:59 -08:00
Antonin Portelli
f599cb5b17 HDF5 serial IO implemented and tested 2017-01-18 16:50:21 -08:00
Guido Cossu
23e0561dd6 Added all required functionalities, time for cleaning 
All actions to be added
 2017-01-18 16:31:51 +00:00
Antonin Portelli
5803933aea First implementation of HDF5 serial IO writer, reader is still empty 2017-01-17 16:21:18 -08:00
Guido Cossu
924130833e Moved more parameters to serialization 2017-01-17 13:22:18 +00:00
Guido Cossu
0157274762 HMC factories 2017-01-17 10:46:49 +00:00
Guido Cossu
87e8aad5a0 Added support for input file HMC modules (missing the actions yet) 2017-01-16 16:07:12 +00:00
Guido Cossu
c6f59c2933 Adding factories 2017-01-16 10:18:09 +00:00
Antonin Portelli
91a3534054 Lattice slice utilities now thread safe 2017-01-16 06:32:25 +00:00
Guido Cossu
0dfda4bb90 Working on the RNGModule 2017-01-09 11:06:18 +00:00
Guido Cossu
1189ebc8b5 Cleaning up the checkpointers interface 2017-01-05 15:52:52 +00:00
Antonin Portelli
82b3f54697 scalar free propagator fix 2017-01-05 14:58:07 +00:00
Guido Cossu
1bb8578173 Added module for checkpointers 2017-01-05 13:09:32 +00:00
Peter Boyle
c3b6d573b9 Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm 2016-12-30 22:42:17 +00:00
Antonin Portelli
afbf7d4c37 QED Gimpl moved in Photon.h 2016-12-29 22:43:38 +01:00
Antonin Portelli
8c3cc32364 Scalar action 2016-12-29 22:42:58 +01:00
Peter Boyle
1e179c903d Worried about integer; suspect where statements are broken 2016-12-27 17:46:38 +00:00
Peter Boyle
669cfca9b7 No inline 2016-12-27 17:45:40 +00:00
Peter Boyle
ff2f559a57 Remove inline on gather optimised path 2016-12-27 17:45:19 +00:00
Peter Boyle
03c81bd902 Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm 2016-12-27 11:25:35 +00:00
Peter Boyle
a869addef1 Stats switch off 2016-12-27 11:25:22 +00:00
Peter Boyle
1caa3fbc2d LOCK UNLOCK only 2016-12-27 11:24:45 +00:00
Peter Boyle
3d21297bbb Call the fast path compressor for wilson kernels to avoid if else on projector 2016-12-27 11:23:13 +00:00
Peter Boyle
25efefc5b4 Back to original thread policy post test 2016-12-23 09:49:04 +00:00
Peter Boyle
eabf316ed9 BGQ performance ASM 2016-12-22 21:56:08 +00:00
Peter Boyle
04ae7929a3 BGQ or KNL assembler now 2016-12-22 17:53:22 +00:00
Peter Boyle
caba0d42a5 L1p controls 2016-12-22 17:52:55 +00:00
Peter Boyle
9ae81c06d2 L1p controls for BG/Q 2016-12-22 17:52:21 +00:00
Peter Boyle
7dc36628a1 QPX finishing 2016-12-22 17:50:48 +00:00
Peter Boyle
b8cdb3e90a Debug hack; raises from 62GF/s to 72 GF/s per node on BG/Q 2016-12-22 17:50:14 +00:00
Peter Boyle
5241245534 Default to static scheduling 2016-12-22 17:49:21 +00:00
Dr Peter Boyle
960316e207 type conversion in printf 2016-12-22 17:27:01 +00:00
Guido Cossu
5214846341 Adding a resource manager 2016-12-22 12:41:56 +00:00
Antonin Portelli
17b3a10d46 stochastic QED: function to cache 1/sqrt(khat^2) 2016-12-22 00:29:19 +01:00
Guido Cossu
ce1a115e0b Removing redundant arguments for integrator functions, step 1 2016-12-20 17:51:30 +00:00
Antonin Portelli
9ac3ac41df serialisable Photon parameters 2016-12-20 12:41:01 +01:00
Antonin Portelli
6f1ea96293 Merge branch 'develop' into feature/qed-fvol 2016-12-20 12:33:02 +01:00
Antonin Portelli
f8d11ff673 better serialisable enums (can be encapsulated into classes) 2016-12-20 12:31:49 +01:00
paboyle
3f2d53a994 BGQ assembler beginning 2016-12-20 10:21:26 +00:00
paboyle
a59f5374d7 Evade warning 2016-12-18 02:23:55 +00:00
paboyle
4b220972ac Warning fix 2016-12-18 02:14:17 +00:00
paboyle
629f43e36c Return statement needed 2016-12-18 02:09:37 +00:00
paboyle
a3172b3455 Precision error 2016-12-18 02:07:45 +00:00
paboyle
3e6945cd65 Fixing AVX Z-mobius 2016-12-18 02:05:11 +00:00
paboyle
87be03006a AVX 512 code broke other compiles; fixing 2016-12-18 01:45:09 +00:00
paboyle
f17436fec2 Bad commit fixed 2016-12-18 01:27:34 +00:00
Peter Boyle
4d8b01b7ed Merge branch 'develop' of https://github.com/paboyle/Grid into develop 2016-12-18 00:56:57 +00:00
Peter Boyle
fa6acccf55 Zmobius asm 2016-12-18 00:56:19 +00:00
azusayamaguchi
df9108154d Debugged 2 versions of assembler; ls vectorised, xyzt vectorised 2016-12-17 23:47:51 +00:00
azusayamaguchi
b3e7f600da Partial implementation of 4d vectorisation assembler 2016-12-16 23:50:30 +00:00
azusayamaguchi
d4071daf2a Template specialise 2016-12-16 22:28:29 +00:00
azusayamaguchi
a2a6329094 AVX512 only for ASM compilation 2016-12-16 22:03:29 +00:00
azusayamaguchi
eabc577940 Assembler possibly working 2016-12-16 16:55:36 +00:00
Antonin Portelli
2e3c5890b6 qed-fvol: build fix 2016-12-15 20:06:46 +00:00
Antonin Portelli
bc6678732f Merge branch 'feature/hadrons' into feature/qed-fvol 
# Conflicts:
#	Makefile.am
#	configure.ac
#	lib/qcd/action/gauge/Photon.h
 2016-12-15 19:53:00 +00:00
Antonin Portelli
91e98b1dd5 Merge branch 'feature/hadrons' into develop 2016-12-15 18:15:56 +00:00
Antonin Portelli
b791c274b0 Revert "AVX: uninitialised variable fix" 
This reverts commit c22c3db9ad.
 2016-12-15 18:15:35 +00:00
Guido Cossu
0bd296dda4 Adding check of the Dag part in the benchmark 2016-12-14 03:15:09 +00:00
Antonin Portelli
c22c3db9ad AVX: uninitialised variable fix 2016-12-13 19:05:58 +00:00
Guido Cossu
2fb92dbc6e Cleaning up previous debug lines 2016-12-13 07:53:43 +00:00
Guido Cossu
5c74b6028b Commit for debugging, lot of IO 2016-12-13 06:35:30 +00:00
Guido Cossu
ef72f322d2 consistency of tests 2016-12-13 02:24:20 +00:00
Azusa Yamaguchi
426197e446 Nc=3 2016-12-12 09:10:54 +00:00
Azusa Yamaguchi
99e2c1e666 Kernels options 2016-12-12 09:08:53 +00:00
Azusa Yamaguchi
1440565a10 Decrease verbosity 2016-12-12 09:08:04 +00:00
Azusa Yamaguchi
e9f0c0ea39 Staggered kernels options 2016-12-12 09:07:38 +00:00
Peter Boyle
fe187e9ed3 Compiles and passes under ZMobius with assembler 2016-12-10 00:47:48 +00:00
Peter Boyle
0091b50f49 Zmobius working -- not asm yet 2016-12-09 22:51:32 +00:00
Peter Boyle
fb8d4b2357 Lots of debug on performance Mobius 2016-12-08 17:28:28 +00:00
Peter Boyle
83fa038bdf Streaming stores 2016-12-08 16:58:42 +00:00
Peter Boyle
7a61feb6d3 Allocator added with caching for Linux VM subsystem optimisation 2016-12-08 16:58:01 +00:00
Peter Boyle
69ae817d1c Updates for supporting Mobius better 2016-12-08 16:43:28 +00:00
Guido Cossu
2bd4233919 Completed testing of the HMC for Ls vectorised version (on AVX2) 2016-12-07 04:56:37 +00:00
Guido Cossu
143c70e29f Debugged the threaded version. Cleaning up 2016-12-07 04:40:25 +00:00
Antonin Portelli
51322da6f8 Hadrons: genetic scheduler improvement 2016-12-07 09:00:45 +09:00
Antonin Portelli
c56707e003 useless debug message removed 2016-12-07 08:59:20 +09:00
Guido Cossu
b812d5e39c Added single threaded version of the derivative for the Ls vectorised DWF 2016-12-06 16:31:13 +00:00
Guido Cossu
01480da0a8 Merge branch 'develop' into feature/hmc_generalise 2016-12-05 05:10:27 +00:00
Peter Boyle
e27c6b217c Updating 2016-12-01 12:42:53 +00:00
Antonin Portelli
9ad3d3453e Hadrons is now a library, the previous XML driven program is now a test 2016-12-01 21:36:29 +09:00
paboyle
6adf35da54 Faster Mobius 2016-12-01 11:39:04 +00:00
paboyle
bd0430b34f Serialisation in malloc fixed 2016-11-29 22:27:55 +00:00
Azusa Yamaguchi
c097fd041a Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering 2016-11-29 13:44:17 +00:00
Azusa Yamaguchi
77fb25fb29 Push 5d tests 2016-11-29 13:43:56 +00:00
Azusa Yamaguchi
389e0a77bd Staggerd Fermion 5D 2016-11-29 13:13:56 +00:00
paboyle
4704f2d009 Actions updated 2016-11-29 00:14:36 +00:00
Guido Cossu
ae9688e343 Reporting also the total mflops 2016-11-28 11:37:02 +00:00
Antonin Portelli
43928846f2 first steps to make Hadrons a library 2016-11-28 16:02:15 +09:00
Antonin Portelli
fabcd4179d Hadrons: propagator type coming from the fermion implementation 2016-11-28 14:02:10 +09:00
Antonin Portelli
a8843c9af6 Code cleaning, the fermion implementation can be sepcified using the macro FIMPL 2016-11-27 16:47:22 +09:00
Antonin Portelli
7a1a7a685e Merge branch 'feature/fft-opt' into feature/hadrons 2016-11-27 15:32:03 +09:00
Lanny91
b18950f776 Added simd real divide test with QPX divide fixes 2016-11-25 13:21:33 +00:00
Lanny91
0acbf77bc6 Add QPX Div structure 2016-11-24 13:24:12 +00:00
Antonin Portelli
5833f247fa more FFt optimisations 2016-11-24 09:09:48 +09:00
Azusa Yamaguchi
95f43d27ae Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering 2016-11-22 13:49:22 +00:00
Azusa Yamaguchi
668ca57702 Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering 2016-11-22 13:49:11 +00:00
Antonin Portelli
a2cffb0304 AVXFMA target fixed 2016-11-21 17:47:18 +01:00
Antonin Portelli
97cddda49e Merge branch 'feature/gen-simd' into feature/doxygen 
# Conflicts:
#	Makefile.am
#	configure.ac
 2016-11-19 13:11:13 +01:00
Antonin Portelli
b873504b90 fully generic SIMD 2016-11-19 01:32:39 +01:00
Guido Cossu
62749d05a6 Naming the scalar action 2016-11-17 12:26:20 +00:00
Guido Cossu
3834feb4b7 Adding action names 2016-11-16 16:46:49 +00:00
James Harrison
6b8ee7bae0 Merge branch 'feature/feynman-rules' into feature/qed-fvol 2016-11-15 13:08:08 +00:00
James Harrison
739c2308b5 Set imaginary part of stochastic QED field to zero using real() instead of conjugate(). 2016-11-15 13:07:52 +00:00
Antonin Portelli
042ae5b87c generic 256bits SIMD 2016-11-15 12:16:15 +00:00
James Harrison
d49e502f53 Merge branch 'feature/feynman-rules' into feature/qed-fvol 2016-11-14 18:00:33 +00:00
James Harrison
92ec3404f8 Set imaginary part of stochastic QED field to zero after FFT into position space 2016-11-14 17:59:02 +00:00
Guido Cossu
a783282b8b Merge branch 'develop' into feature/hmc_generalise 2016-11-10 18:13:07 +00:00
paboyle
604f0ea2f6 Merge branch 'develop' into release/v0.6.0 2016-11-09 04:13:01 -08:00
paboyle
33dc1f51b5 Final sign off commits from Cori-1 2016-11-09 04:11:03 -08:00
James Harrison
c30d96ea50 QedFVol: x86intrin.h namespace fix 2016-11-09 11:06:20 +00:00
Antonin Portelli
13a8997789 Merge branch 'release/v0.6.0' into feature/hadrons 
# Conflicts:
#	Makefile.am
 2016-11-08 20:43:39 +00:00
Antonin Portelli
9576f0903d namespace fix 2016-11-08 19:07:47 +00:00
Antonin Portelli
8a5e3a917c Merge branch 'develop' into release/v0.6.0 
# Conflicts:
#	tests/core/Test_fft_gfix.cc
 2016-11-08 16:53:42 +00:00
Antonin Portelli
3d2a22a14d include fix for MKL 2016-11-08 15:31:47 +00:00
azusayamaguchi
f85b35314d Fix a routine for single node processor coor from rank 2016-11-08 11:49:13 +00:00
azusayamaguchi
0cff8754d1 Usecs 2016-11-08 11:35:41 +00:00
azusayamaguchi
692b44dac1 Merge branch 'develop' into release/v0.6.0 2016-11-04 22:48:11 +00:00
azusayamaguchi
96ba42a297 omm buf 2016-11-04 22:47:25 +00:00
azusayamaguchi
f7b60004f3 Merge branch 'develop' into release/v0.6.0 2016-11-04 16:08:07 +00:00
Antonin Portelli
ad971ca07b fftw3.h is now expected to be an external header 2016-11-04 13:12:35 +00:00
Antonin Portelli
f2f16eb972 fftw3.h removed, please don't commit this file back 2016-11-04 13:11:05 +00:00
azusayamaguchi
b7d55f7dfb Fix a typo in reorg of the --dslash-asm 2016-11-04 11:35:08 +00:00
azusayamaguchi
6e548a8ad5 Linux compile needed 2016-11-04 11:34:16 +00:00
Azusa Yamaguchi
ee686a7d85 Compiles now 2016-11-03 16:58:23 +00:00
Azusa Yamaguchi
1c5b7a6be5 Staggered phases first cut, c1, c2, u0 2016-11-03 16:26:56 +00:00
Antonin Portelli
a5dd4a9bab Merge branch 'feature/fft-opt' into develop 2016-11-03 14:34:46 +00:00
Antonin Portelli
ec232af851 Photon.h references removed 2016-11-03 14:34:16 +00:00
Antonin Portelli
17e30281e9 Merge branch 'develop' into feature/fft-opt 
# Conflicts:
#	lib/FFT.h
 2016-11-03 14:14:03 +00:00
Antonin Portelli
aee44dc694 Photon.h removed from develop branch 2016-11-03 13:54:15 +00:00
Antonin Portelli
75bbf6a0af Merge branch 'develop' into feature/feynman-rules 2016-11-03 13:52:11 +00:00
paboyle
111bfbc6bc notimestamp by default 2016-11-03 11:40:26 +00:00
paboyle
f41a230b32 Decrease mpi3l verbose 2016-11-02 19:54:03 +00:00
paboyle
c067051d5f Merge branch 'develop' into release/v0.6.0 2016-11-02 13:59:18 +00:00
paboyle
9e2ec2719b Merge branch 'develop' into feature/mpi3-master-slave 2016-11-02 13:02:56 +00:00
paboyle
757a928f9a Improvement to use own SHM_OPEN call to avoid openmpi bug. 2016-11-02 12:37:46 +00:00
Guido Cossu
bc248b6948 Merge branch 'release/v0.6.0' into feature/KNL_double_prec 
Conflicts:
	lib/simd/Grid_avx512.h
 2016-11-02 10:40:49 +00:00
Guido Cossu
ae8561892e Eliminating useless defines 2016-11-02 10:21:06 +00:00
paboyle
32375aca65 Semaphore sleep/wake up on remote processes. 2016-11-02 09:27:20 +00:00
paboyle
bb94ddd0eb Tidy up of mpi3; also some cleaning of the dslash controls. 2016-11-02 08:07:09 +00:00
James Harrison
7f0fc0eff5 Remove explicit use of double-precision types in photon.h 2016-11-01 16:02:35 +00:00
Azusa Yamaguchi
164d3691db Staggered 2016-11-01 14:24:22 +00:00
paboyle
791cb050c8 Comms improvements 2016-11-01 11:35:43 +00:00
Antonin Portelli
d5e95bc350 Merge branch 'release/v0.6.0' into feature/feynman-rules 2016-10-31 18:36:21 +00:00
Antonin Portelli
7a84906b5f Merge branch 'release/v0.6.0' into feature/fft-opt 2016-10-31 18:31:49 +00:00
Antonin Portelli
66d832c733 FFTW header fix 2016-10-31 16:39:29 +00:00
Antonin Portelli
e74417ca12 big build system polish 2016-10-31 16:31:27 +00:00
Guido Cossu
e8c3174ae2 Small change in the defines 2016-10-30 12:23:11 +00:00
Guido Cossu
9b066e94d0 Compilation with both single and double precision 2016-10-30 12:04:06 +00:00
James Harrison
618abdf302 Add missing volume factor in stochastic QED field 2016-10-29 11:04:02 +01:00
Guido Cossu
e1042aef77 First version of the doube prec for testing purposes 
It does not compile single and double version at the same time
 2016-10-28 17:20:04 +01:00
paboyle
aa6a839c60 avx512 build fix; detect clang/gcc intrinsics vs. ICPC 2016-10-28 09:13:09 +01:00
Antonin Portelli
b4d2af8c89 threaded FFT 2016-10-26 19:46:36 +01:00
Antonin Portelli
434af6aeaa Merge branch 'develop' into feature/fft-opt 2016-10-26 18:50:38 +01:00
Antonin Portelli
e90f8ac841 Merge branch 'develop' into feature/feynman-rules 2016-10-26 18:50:21 +01:00
Antonin Portelli
a1705a8d53 debug message removed 2016-10-26 18:50:07 +01:00
Antonin Portelli
ca21003f01 Merge branch 'feature/fft-opt' into feature/feynman-rules 
# Conflicts:
#	lib/FFT.h
#	lib/qcd/action/fermion/WilsonFermion5D.h
#	tests/core/Test_fft.cc
 2016-10-26 18:44:47 +01:00
Antonin Portelli
14ddf2c234 more FFT optimisations 2016-10-26 17:36:26 +01:00
Guido Cossu
1d666771f9 Debugging the RNG, eliminate the barrier after broadcast 2016-10-26 16:08:23 +01:00
Guido Cossu
d50055cd96 Making the ILDG support optional 2016-10-26 09:48:01 +01:00
Azusa Yamaguchi
bca861e112 Note:FFT shoud be GridFFT (Not change yet). 
Gauge fix with FFt is added (tests/core)
 2016-10-25 14:21:48 +01:00
Antonin Portelli
33d199a0ad temporary thread safety in FFT 2016-10-25 12:56:40 +01:00
paboyle
b820076b91 Merge branch 'develop' into feature/mpi3 2016-10-25 06:02:33 +01:00
paboyle
09f66100d3 MPI 3 compile on non-linux 2016-10-25 06:01:12 +01:00
azusayamaguchi
d7d92af09d Travis fail fix attempt 2016-10-25 01:45:53 +01:00
azusayamaguchi
460d0753a1 Merge branch 'develop' into feature/mpi3 
Conflicts:
	lib/simd/Grid_avx512.h
 2016-10-25 01:08:51 +01:00
azusayamaguchi
8f8058f8a5 More random bits on parallel seeding 2016-10-25 01:05:52 +01:00
azusayamaguchi
d97a27f483 Verbose 2016-10-25 01:05:31 +01:00
azusayamaguchi
7c3363b91e Compiles all comms targets 2016-10-25 00:04:17 +01:00
azusayamaguchi
b94478fa51 mpi, mpi3, shmem all compile. 
mpi, mpi3 pass single node multi-rank
 2016-10-24 23:45:31 +01:00
Guido Cossu
47c7159177 ILDG reader/writer works 
Fill the xml header with the required information, todo.
 2016-10-24 21:57:54 +01:00
Antonin Portelli
13bf0482e3 FFT optimisation 2016-10-24 19:25:40 +01:00
Antonin Portelli
a795b5705e memory optimisation 2016-10-24 19:25:15 +01:00
Antonin Portelli
392e064513 fast local peek-poke 2016-10-24 19:24:21 +01:00
azusayamaguchi
b6a65059a2 Update to use shared memory to contain the stencil comms buffers 
Tested on 2.1.1.1 1.2.1.1 4.1.1.1 1.4.1.1 2.2.1.1 subnode decompositions
 2016-10-24 17:30:43 +01:00
Guido Cossu
f415db583a Adding ILDG format 2016-10-24 15:48:22 +01:00
Guido Cossu
f55c16f984 Adding a barrier in the RNG save 2016-10-24 11:02:14 +01:00
azusayamaguchi
ea25a4d9ac Works 2016-10-23 06:10:05 +01:00
azusayamaguchi
c190221fd3 Internal SHM comms in non-simd directions working 
Need to fix simd directions
 2016-10-22 18:14:27 +01:00
Guido Cossu
df67e013ca More debug output for the RNG 2016-10-22 13:34:17 +01:00
Guido Cossu
3e990c9d0a Reverting the broadcast change 2016-10-22 13:26:43 +01:00
Guido Cossu
4b740fc8fd Debugging the RNG state save 2016-10-22 13:06:00 +01:00
azusayamaguchi
0fcd2e7188 Simplify the comms structure prior to implementing Shared memory direct bouncs 2016-10-21 22:44:10 +01:00
azusayamaguchi
910b8dd6a1 use simd type 2016-10-21 22:35:29 +01:00
azusayamaguchi
75ebd3a0d1 Typo fixes and rotate for CLANG 2016-10-21 22:34:29 +01:00
Guido Cossu
cccd14b09e Small cleanup 2016-10-21 17:20:54 +01:00
Guido Cossu
e6acffdfc2 Fixing the plaquette computation 2016-10-21 16:06:34 +01:00
Antonin Portelli
7c8f79b147 more stochastic QED fixes 2016-10-21 15:20:12 +01:00
azusayamaguchi
09fd5c43a7 Reasonably fast version 2016-10-21 15:17:39 +01:00
Antonin Portelli
462921e549 QED: fix stochastic field 2016-10-21 14:41:08 +01:00
Guido Cossu
392130a537 Working on the 5d 2016-10-21 14:22:25 +01:00
azusayamaguchi
f22317748f Merge branch 'feature/mpi3' of https://github.com/paboyle/Grid into feature/mpi3 2016-10-21 13:36:35 +01:00
azusayamaguchi
6a9eae6b6b Reporting improvements 2016-10-21 13:36:18 +01:00
azusayamaguchi
fad96cf250 StencilBufs 2016-10-21 13:36:00 +01:00
azusayamaguchi
f331809c27 Use variable type for loop 2016-10-21 13:35:37 +01:00
Antonin Portelli
bd6a228af6 Merge commit '20a091c3eddfdb67a82ece6413740a93650a2f98' into feature/feynman-rules 2016-10-21 13:10:30 +01:00
Antonin Portelli
63d219498b first (dirty) implementation of Feynman stoctachtic EM field 2016-10-21 13:10:13 +01:00
paboyle
2c54a53d0a Compile verbose reduce 2016-10-21 12:12:14 +01:00
paboyle
306160ad9a bcopy threaded 2016-10-21 12:07:28 +01:00
azusayamaguchi
20a091c3ed Intel vs. Clang intrinsics differences absorbed 2016-10-21 09:08:36 +01:00
azusayamaguchi
202078eb1b Cray / OpenSHMEM ordering differs 2016-10-21 09:07:20 +01:00
paboyle
a762b1fb71 MPI3 working with a bounce through shared memory on my laptop. 
Longer term plan: make the "u_comm_buf" in Stencil point to the shared region and avoid the
send between ranks on same node.
 2016-10-21 09:03:26 +01:00
Guido Cossu
deef2673b2 Separating the Lattice theories stub from the QCD.h file 2016-10-20 17:24:08 +01:00
paboyle
5b5925b8e5 Forgot to add 2016-10-20 17:09:40 +01:00
Guido Cossu
977b0a6dd9 Merge branch 'develop' into feature/hmc_generalise 2016-10-20 17:04:41 +01:00
Guido Cossu
977d844394 Few modifications on stdout messages 2016-10-20 17:01:59 +01:00
paboyle
b58adc6a4b commVector 2016-10-20 17:00:15 +01:00
paboyle
f9d5e95d72 allocator template typedefs moved to AlignedAllocator 2016-10-20 16:59:39 +01:00
paboyle
4f8e636a43 commVector 2016-10-20 16:59:16 +01:00
paboyle
9b39f35ae6 commVector different for SHMEM compat 2016-10-20 16:58:53 +01:00
paboyle
5fe2b85cbd MPI3 and shared memory support 2016-10-20 16:58:01 +01:00
paboyle
c7cccaaa69 Comm vector for shmem 2016-10-20 16:57:31 +01:00
paboyle
cbcfea466f MPI3 2016-10-20 16:57:14 +01:00
paboyle
4955672fc3 MPI3 2016-10-20 16:57:00 +01:00
paboyle
8c043da5b7 SHMEM and comms allocator made different 2016-10-20 16:56:05 +01:00
paboyle
3cbe974eb4 Layout 2016-10-20 16:55:21 +01:00
Antonin Portelli
997fd882ff Merge branch 'develop' into feature/feynman-rules 
# Conflicts:
#	lib/Threads.h
#	lib/qcd/action/fermion/WilsonFermion.cc
#	lib/qcd/action/fermion/WilsonFermion.h
#	lib/qcd/utils/SUn.h
#	lib/simd/Grid_avx.h
#	lib/simd/Intel512common.h
 2016-10-19 18:35:18 +01:00
Guido Cossu
590675e2ca Csum in hex format 2016-10-19 17:26:25 +01:00
Guido Cossu
8c65bdf6d3 Printing checksum for the RNG file 2016-10-19 16:56:11 +01:00
Guido Cossu
74f1ed3bc5 Adding some documentation for HMC 2016-10-19 10:51:13 +01:00
paboyle
7af9b87318 Cache face tables to improve performance. 
Extract merge now looking poor.
 2016-10-18 09:51:37 +01:00
paboyle
811ca45473 GNU clang hack for AVX512 since there are missing reduce intrinsics in Clang 3.9 and GCC-6 AVX512 support 2016-10-17 16:23:21 +01:00
paboyle
bc1a4d40ba Faster integer handling avoid push_back 2016-10-17 16:16:44 +01:00
Guido Cossu
e250e6b7bb Moving parameters outside of the HMCrunner 2016-10-14 17:22:32 +01:00
paboyle
c8079e6621 Time the face gateher in x-dir more carefully 2016-10-13 22:28:50 +01:00