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388 Commits

Author SHA1 Message Date
Azusa Yamaguchi
8f9627520b merge to the head 2015-06-05 10:15:31 +01:00
Azusa Yamaguchi
58a4f32298 merge to the head 2015-06-05 10:15:31 +01:00
Peter Boyle
7678fbd30d PartialFraction Hw with Zolo and Tanh approx converged under CG and passed EO breakdown 
and hermiticity tests.
 2015-06-04 13:28:37 +01:00
Peter Boyle
63a61fcc2a PartialFraction Hw with Zolo and Tanh approx converged under CG and passed EO breakdown 
and hermiticity tests.
 2015-06-04 13:28:37 +01:00
neo
949b6a7afa Added support for Ta to Lattice types 2015-06-04 18:29:55 +09:00
neo
4b114fce3d Added support for Ta to Lattice types 2015-06-04 18:29:55 +09:00
neo
bb73569fd6 Addedd Ta functionality to the tensor types 
Merge remote-tracking branch 'upstream/master'

Conflicts:
	configure
 2015-06-04 18:11:32 +09:00
neo
3055d2cf2c Addedd Ta functionality to the tensor types 
Merge remote-tracking branch 'upstream/master'

Conflicts:
	configure
 2015-06-04 18:11:32 +09:00
Peter Boyle
9c1ab656d4 CG Tests work for wilson kernel cont frac zolo and tanh 2015-06-04 06:02:00 +01:00
Peter Boyle
dd1f5dd966 CG Tests work for wilson kernel cont frac zolo and tanh 2015-06-04 06:02:00 +01:00
Peter Boyle
802e94e9ca First pass at continued fraction; solver and even odd decomposition tests pass. 
Have to make ContFrac class virtual and derive end non-abstract actions for the particular
cases.
 2015-06-04 00:00:45 +01:00
Peter Boyle
03f4fde468 First pass at continued fraction; solver and even odd decomposition tests pass. 
Have to make ContFrac class virtual and derive end non-abstract actions for the particular
cases.
 2015-06-04 00:00:45 +01:00
Peter Boyle
e68d087010 Assist for generating file lists contained in Make.inc files for convenience when things are added 2015-06-03 13:07:00 +01:00
Peter Boyle
f07a17ba2c Assist for generating file lists contained in Make.inc files for convenience when things are added 2015-06-03 13:07:00 +01:00
Peter Boyle
f9b070d64d Reorganise of file naming 2015-06-03 12:47:05 +01:00
Peter Boyle
1d0df449e8 Reorganise of file naming 2015-06-03 12:47:05 +01:00
Peter Boyle
6cb38dc5dc Overlap Wilson Cayley tanh & zolo 2015-06-03 11:26:54 +01:00
Peter Boyle
a3b599ae30 Overlap Wilson Cayley tanh & zolo 2015-06-03 11:26:54 +01:00
Peter Boyle
2b083ca987 CG test written and passes i.e. converges with small true residual 
in RedBlack MpcDagMpc, Unprec MdagM and Schur red black solver for
each of.

DomainWallFermion
MobiusFermion
MobiusZolotarevFermion
ScaledShamirFermion
ScaledShamirZolotarevFermion
 2015-06-03 10:54:03 +01:00
Peter Boyle
84b5c7217d CG test written and passes i.e. converges with small true residual 
in RedBlack MpcDagMpc, Unprec MdagM and Schur red black solver for
each of.

DomainWallFermion
MobiusFermion
MobiusZolotarevFermion
ScaledShamirFermion
ScaledShamirZolotarevFermion
 2015-06-03 10:54:03 +01:00
Peter Boyle
c659c76053 Scaled Shamir and Scaled Shamir Zolotarev aliases for special cases of Mobius. 2015-06-03 09:51:06 +01:00
Peter Boyle
260011670e Scaled Shamir and Scaled Shamir Zolotarev aliases for special cases of Mobius. 2015-06-03 09:51:06 +01:00
Peter Boyle
68e26140ee Mobius Caley form, Mobius Zolotarev operators. Pass Even Odd vs unprec test and hermiticity checks 
in tests/Grid_any_evenodd.cc; will work on inversion tests shortly.
 2015-06-03 09:36:26 +01:00
Peter Boyle
1fcacef239 Mobius Caley form, Mobius Zolotarev operators. Pass Even Odd vs unprec test and hermiticity checks 
in tests/Grid_any_evenodd.cc; will work on inversion tests shortly.
 2015-06-03 09:36:26 +01:00
Peter Boyle
494d2b8b61 Reorg; moving prec/unprec/schur CG for Wilson and DWF into tests as these are really tests and not benchmarks 
(no performance reports, only convergence test).
 2015-06-02 17:25:26 +01:00
Peter Boyle
69f4d58381 Reorg; moving prec/unprec/schur CG for Wilson and DWF into tests as these are really tests and not benchmarks 
(no performance reports, only convergence test).
 2015-06-02 17:25:26 +01:00
Peter Boyle
66d997e031 Large scale change to support 5d fermion formulations. 
Have 5d replicated wilson with 4d gauge working and matrix regressing
to Ls copies of wilson.
 2015-05-31 15:09:02 +01:00
Peter Boyle
5644ab1e19 Large scale change to support 5d fermion formulations. 
Have 5d replicated wilson with 4d gauge working and matrix regressing
to Ls copies of wilson.
 2015-05-31 15:09:02 +01:00
neo
9ad6d0c65f Merge remote-tracking branch 'upstream/master' 
Conflicts:
	lib/math/Grid_math_tensors.h
	lib/simd/Grid_vector_types.h
 2015-05-26 13:14:06 +09:00
neo
48cc816136 Merge remote-tracking branch 'upstream/master' 
Conflicts:
	lib/math/Grid_math_tensors.h
	lib/simd/Grid_vector_types.h
 2015-05-26 13:14:06 +09:00
neo
377083e6ae checked performance of new vector libaries. 
Added check for c++11 support on the configure.ac
 2015-05-26 12:02:54 +09:00
neo
1a24801246 checked performance of new vector libaries. 
Added check for c++11 support on the configure.ac
 2015-05-26 12:02:54 +09:00
Peter Boyle
d7f5172860 Schur complement based red-black inversion working 2015-05-25 13:47:12 +01:00
Peter Boyle
489b1b9633 Schur complement based red-black inversion working 2015-05-25 13:47:12 +01:00
Peter Boyle
41ba13f951 Merge branch 'master' of https://github.com/paboyle/Grid 2015-05-23 09:36:08 +01:00
Peter Boyle
5cf285bce9 Merge branch 'master' of https://github.com/paboyle/Grid 2015-05-23 09:36:08 +01:00
neo
57feda4328 Completed implementation of new Grid_simd classes 
Tested performance for SSE4, Ok.
AVX1/2, AVX512 yet untested
 2015-05-22 17:33:15 +09:00
neo
9e29ac6549 Completed implementation of new Grid_simd classes 
Tested performance for SSE4, Ok.
AVX1/2, AVX512 yet untested
 2015-05-22 17:33:15 +09:00
neo
f8d8958884 Merge remote-tracking branch 'upstream/master' 
Conflicts:
	lib/simd/Grid_vector_types.h
	tests/Makefile.am
 2015-05-20 17:32:46 +09:00
neo
d03c4e5901 Merge remote-tracking branch 'upstream/master' 
Conflicts:
	lib/simd/Grid_vector_types.h
	tests/Makefile.am
 2015-05-20 17:32:46 +09:00
neo
e529210f43 Implemented all SSE4 functions. 
A test code Grid_simd_new.cc has been created to test the new class.
Tests are all OK.
 2015-05-20 17:22:40 +09:00
neo
cf7be0e461 Implemented all SSE4 functions. 
A test code Grid_simd_new.cc has been created to test the new class.
Tests are all OK.
 2015-05-20 17:22:40 +09:00
Peter Boyle
8fdff33b3a Merging in 
Merge branch 'master' of https://github.com/paboyle/Grid
 2015-05-19 21:30:13 +01:00
Peter Boyle
221902a882 Merging in 
Merge branch 'master' of https://github.com/paboyle/Grid
 2015-05-19 21:30:13 +01:00
Peter Boyle
efc0d1e0b9 Reworking to keep intel compiler happy 2015-05-19 21:29:07 +01:00
Peter Boyle
a21036e69a Reworking to keep intel compiler happy 2015-05-19 21:29:07 +01:00
Peter Boyle
3fe7275332 Merged 
Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master

Conflicts:
	lib/simd/Grid_vector_types.h
 2015-05-19 15:05:07 +01:00
Peter Boyle
fde7f8d6b9 Merged 
Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master

Conflicts:
	lib/simd/Grid_vector_types.h
 2015-05-19 15:05:07 +01:00
Peter Boyle
a6e1ea216d Got unpreconditioned conjugate gradient to run and converge on a random (uniform random, 
not even SU(3) for now) gauge field. Convergence history is correctly indepdendent of decomposition
on 1,2,4,8,16 mpi tasks.
Found a couple of simd bugs which required fixed and enhanced the Grid_simd.cc test suite.
Implemented the Mdag, M, MdagM, Meooe Mooee schur type stuff in the wilson dop.
 2015-05-19 13:57:35 +01:00
Peter Boyle
4dba8522a1 Got unpreconditioned conjugate gradient to run and converge on a random (uniform random, 
not even SU(3) for now) gauge field. Convergence history is correctly indepdendent of decomposition
on 1,2,4,8,16 mpi tasks.
Found a couple of simd bugs which required fixed and enhanced the Grid_simd.cc test suite.
Implemented the Mdag, M, MdagM, Meooe Mooee schur type stuff in the wilson dop.
 2015-05-19 13:57:35 +01:00
neo
7fb3221d47 Partial implementation of the vector types SIMD 
Implementing SSE4 now
A systematic series of tests must be written.
 2015-05-19 17:21:17 +09:00
neo
74e91cd925 Partial implementation of the vector types SIMD 
Implementing SSE4 now
A systematic series of tests must be written.
 2015-05-19 17:21:17 +09:00
Peter Boyle
30494bd96d Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master 
Conflicts:
	lib/algorithms/approx/bigfloat.h
 2015-05-18 16:34:21 +01:00
Peter Boyle
05f1419df4 Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master 
Conflicts:
	lib/algorithms/approx/bigfloat.h
 2015-05-18 16:34:21 +01:00
Peter Boyle
193fd5532f Remez tested 2015-05-18 12:09:25 +01:00
Peter Boyle
17835c6f42 Remez tested 2015-05-18 12:09:25 +01:00
neo
fa1dc5e448 Minor modification to the configure.ac 
Enables silent rules (use make V=1 to override)
Prints a summary after configure is completed
 2015-05-18 17:15:14 +09:00
neo
99aecf1f2e Minor modification to the configure.ac 
Enables silent rules (use make V=1 to override)
Prints a summary after configure is completed
 2015-05-18 17:15:14 +09:00
neo
6d2accba7b Corrected some compilation errors (zolotarev.h) and SSE4 vsplat and conj to make cshift test pass. 2015-05-18 16:48:14 +09:00
neo
b4cd37276b Corrected some compilation errors (zolotarev.h) and SSE4 vsplat and conj to make cshift test pass. 2015-05-18 16:48:14 +09:00
Peter Boyle
1887c77498 Getting closer to having a wilson solver... introducing a first and untested 
cut at Conjugate gradient. Also copied in Remez, Zolotarev, Chebyshev from
Mike Clark, Tony Kennedy and my BFM package respectively since we know we will
need these. I wanted the structure of

algorithms/approx
algorithms/iterative

etc.. to start taking shape.
 2015-05-18 07:47:05 +01:00
Peter Boyle
11cb3e9a01 Getting closer to having a wilson solver... introducing a first and untested 
cut at Conjugate gradient. Also copied in Remez, Zolotarev, Chebyshev from
Mike Clark, Tony Kennedy and my BFM package respectively since we know we will
need these. I wanted the structure of

algorithms/approx
algorithms/iterative

etc.. to start taking shape.
 2015-05-18 07:47:05 +01:00
Peter Boyle
c99922b591 Out of source compile now working 2015-05-15 12:21:40 +01:00
Peter Boyle
331f832c34 Out of source compile now working 2015-05-15 12:21:40 +01:00
Peter Boyle
457cc0d5a3 RNG test 2015-05-13 09:24:30 +01:00
Peter Boyle
680f4e3636 RNG test 2015-05-13 09:24:30 +01:00
Peter Boyle
d388b831b4 cout IO for all types 2015-05-13 09:24:10 +01:00
Peter Boyle
a108d5d3b0 cout IO for all types 2015-05-13 09:24:10 +01:00
Peter Boyle
52174da232 Enhanced SIMD interfacing 2015-05-12 20:41:44 +01:00
Peter Boyle
6cec662ac5 Enhanced SIMD interfacing 2015-05-12 20:41:44 +01:00
Peter Boyle
65c91eae64 Threading support rework. 
Placed parallel pragmas as macros; implemented deterministic thread reduction in style of
BFM.
 2015-05-12 07:51:41 +01:00
Peter Boyle
6103c29ee3 Threading support rework. 
Placed parallel pragmas as macros; implemented deterministic thread reduction in style of
BFM.
 2015-05-12 07:51:41 +01:00
Peter Boyle
8b765be2b1 Moving some things around for pretty 2015-05-11 19:09:49 +01:00
Peter Boyle
b1d2c60d07 Moving some things around for pretty 2015-05-11 19:09:49 +01:00
Peter Boyle
a411b48a91 Adding a better controlled threading class, preparing to 
force in deterministic reduction.
 2015-05-11 18:59:03 +01:00
Peter Boyle
22d384b07d Adding a better controlled threading class, preparing to 
force in deterministic reduction.
 2015-05-11 18:59:03 +01:00
Peter Boyle
ebcb87abe1 Got command line args working 2015-05-11 14:36:48 +01:00
Peter Boyle
f5dcca7b1b Got command line args working 2015-05-11 14:36:48 +01:00
paboyle
1576b7837a CML parse 2015-05-11 12:56:27 +01:00
paboyle
43e71ff28c CML parse 2015-05-11 12:56:27 +01:00
paboyle
fa5779537c Command line args and a general clean up 2015-05-11 12:43:10 +01:00
paboyle
379943abf5 Command line args and a general clean up 2015-05-11 12:43:10 +01:00
Peter Boyle
242e447bc5 Lots of changes required to compile for MIC under ICPC 2015-05-10 23:29:21 +01:00
Peter Boyle
5555a852be Lots of changes required to compile for MIC under ICPC 2015-05-10 23:29:21 +01:00
Peter Boyle
352bccf6ca Merge branch 'master' of https://github.com/paboyle/Grid 
Conflicts:
	lib/qcd/Grid_qcd_wilson_dop.cc
 2015-05-10 15:37:47 +01:00
Peter Boyle
48b9692845 Merge branch 'master' of https://github.com/paboyle/Grid 
Conflicts:
	lib/qcd/Grid_qcd_wilson_dop.cc
 2015-05-10 15:37:47 +01:00
Peter Boyle
5fcf42cb30 Hack; must bring norm2 into the unary operator list. 
ET's are still incomplete.
 2015-05-10 15:30:29 +01:00
Peter Boyle
4e596da589 Hack; must bring norm2 into the unary operator list. 
ET's are still incomplete.
 2015-05-10 15:30:29 +01:00
Peter Boyle
e647cf0459 Default to single node. Move to command line args. 2015-05-10 15:27:38 +01:00
Peter Boyle
41c9785f3b Default to single node. Move to command line args. 2015-05-10 15:27:38 +01:00
Peter Boyle
8919bf9e0a Single node default. Should expose this as command line args, but haven't sorted out 
Grid_initialize to handle this. Should put this on the TODO list.
 2015-05-10 15:26:06 +01:00
Peter Boyle
443efd875e Single node default. Should expose this as command line args, but haven't sorted out 
Grid_initialize to handle this. Should put this on the TODO list.
 2015-05-10 15:26:06 +01:00
Peter Boyle
5415180676 Wilson perf improvements with Gauge prefetching 2015-05-06 06:37:21 +01:00
Peter Boyle
55ccb8ccf4 Wilson perf improvements with Gauge prefetching 2015-05-06 06:37:21 +01:00
Peter Boyle
7b0dd6c5d6 Cleaned up for Linux 2015-05-05 22:09:22 +01:00
Peter Boyle
35d949cc17 Cleaned up for Linux 2015-05-05 22:09:22 +01:00
Peter Boyle
9d93d1e6d4 Comms and memory benchmarks added 2015-05-03 09:44:47 +01:00
Peter Boyle
193860dbc8 Comms and memory benchmarks added 2015-05-03 09:44:47 +01:00
Peter Boyle
6a39089a43 Starting a benchmarking sub dir 2015-05-02 17:52:36 +01:00
Peter Boyle
4a1d4f1b3c Starting a benchmarking sub dir 2015-05-02 17:52:36 +01:00
Peter Boyle
c0ead94791 Integrated Lebesgue code and been playing with alternate implementations of the wilson dop without 
any particular success in increasing the performance.
 2015-04-30 16:39:06 +01:00
Peter Boyle
a98c01c86a Integrated Lebesgue code and been playing with alternate implementations of the wilson dop without 
any particular success in increasing the performance.
 2015-04-30 16:39:06 +01:00
Peter Boyle
d8ffa09e3b Benchmark wilson dhop now; 14.6GF on one core, not as fast as SU(3)xSU(3) [23GF] but still not too shabby. 
Disassembling output shows ugly sequences in the permute sector. Could comparatively benchmark with and without
the if-else structure to see how much I'm losing.

Drops to 9GF as it falls out of cache. Moving to Lebesgue ordering should help there. Substantive progress.
 2015-04-29 06:50:18 +01:00
Peter Boyle
b7090ebba4 Benchmark wilson dhop now; 14.6GF on one core, not as fast as SU(3)xSU(3) [23GF] but still not too shabby. 
Disassembling output shows ugly sequences in the permute sector. Could comparatively benchmark with and without
the if-else structure to see how much I'm losing.

Drops to 9GF as it falls out of cache. Moving to Lebesgue ordering should help there. Substantive progress.
 2015-04-29 06:50:18 +01:00
Peter Boyle
dcc23faa4a Fixed the stencil sector and Wilson now agrees between stencil based implementation 
and the cshift based implementation. Managed to reduce the volume of code in this
sector a little, but consolidation would be good, perhaps taking common
logic out into simple helper functions
 2015-04-29 06:23:56 +01:00
Peter Boyle
c72db6c6f6 Fixed the stencil sector and Wilson now agrees between stencil based implementation 
and the cshift based implementation. Managed to reduce the volume of code in this
sector a little, but consolidation would be good, perhaps taking common
logic out into simple helper functions
 2015-04-29 06:23:56 +01:00
Peter Boyle
b0485894b3 Shaken out stencil to the point where I think wilson dslash is correct. 
Need to audit code carefully, consolidate between stencil and cshift,
and then benchmark and optimise.
 2015-04-28 08:11:59 +01:00
Peter Boyle
25d523c0f4 Shaken out stencil to the point where I think wilson dslash is correct. 
Need to audit code carefully, consolidate between stencil and cshift,
and then benchmark and optimise.
 2015-04-28 08:11:59 +01:00
Peter Boyle
0b7d389258 Reworking CSHIFT and Stencil. Implementing Wilson and discovered rework is required 2015-04-27 13:45:07 +01:00
Peter Boyle
f159495a9d Reworking CSHIFT and Stencil. Implementing Wilson and discovered rework is required 2015-04-27 13:45:07 +01:00
Peter Boyle
35cfef2129 Big updates with progress towards wilson matrix 2015-04-26 15:51:09 +01:00
Peter Boyle
94f728bee4 Big updates with progress towards wilson matrix 2015-04-26 15:51:09 +01:00
Peter Boyle
2d8cf9e456 Added two spinor functionality required to support the Wilson hopping term. 2015-04-25 12:54:06 +01:00
Peter Boyle
c5fa18eb20 Added two spinor functionality required to support the Wilson hopping term. 2015-04-25 12:54:06 +01:00
Peter Boyle
fc32450360 Improved the gamma quite a bit. 
Serial rng's which are set on node zero and broadcaste
 2015-04-24 20:21:40 +01:00
Peter Boyle
9ec3529864 Improved the gamma quite a bit. 
Serial rng's which are set on node zero and broadcaste
 2015-04-24 20:21:40 +01:00
Peter Boyle
71d5927a66 Vectors now too and right multiple of matrix with gamma 2015-04-24 19:08:29 +01:00
Peter Boyle
38598190c3 Vectors now too and right multiple of matrix with gamma 2015-04-24 19:08:29 +01:00
Peter Boyle
b8eef54fa7 First implementation of Dirac matrices as a Gamma class. 2015-04-24 18:20:03 +01:00
Peter Boyle
d707c4e0a3 First implementation of Dirac matrices as a Gamma class. 2015-04-24 18:20:03 +01:00
Peter Boyle
e2e3ea5742 Reorganised the TODO. Really getting somewhere 2015-04-23 20:42:30 +01:00
Peter Boyle
b9939e3974 Reorganised the TODO. Really getting somewhere 2015-04-23 20:42:30 +01:00
Peter Boyle
62e8d2d127 Slice summation working. May move this into lattice/Grid_lattice_reduction however 2015-04-23 15:13:00 +01:00
Peter Boyle
52a6ba9767 Slice summation working. May move this into lattice/Grid_lattice_reduction however 2015-04-23 15:13:00 +01:00
Peter Boyle
1851327d19 Got the NERSC IO working and fixed a bug in cshift. 2015-04-22 22:46:48 +01:00
Peter Boyle
b32c14b433 Got the NERSC IO working and fixed a bug in cshift. 2015-04-22 22:46:48 +01:00
Peter Boyle
a5b0c492d7 Rework of RNG to use C++11 random. Should work correctly maintaining parallel RNG across 
a machine. If a "fixedSeed" is used, randoms should be reproducible across different machine
decomposition since the generators are physically indexed and assigned in lexico ordering.
 2015-04-19 14:55:58 +01:00
Peter Boyle
42f167ea37 Rework of RNG to use C++11 random. Should work correctly maintaining parallel RNG across 
a machine. If a "fixedSeed" is used, randoms should be reproducible across different machine
decomposition since the generators are physically indexed and assigned in lexico ordering.
 2015-04-19 14:55:58 +01:00
Peter Boyle
1556c2ba3f Finishing the reorg 2015-04-18 21:24:10 +01:00
Peter Boyle
6bd11d920a Finishing the reorg 2015-04-18 21:24:10 +01:00
Peter Boyle
e6ec92d0e4 More files, shorter each. 2015-04-18 20:45:00 +01:00
Peter Boyle
25a8266638 More files, shorter each. 2015-04-18 20:45:00 +01:00
Peter Boyle
1674f899e0 Cleaing up 2015-04-18 16:42:47 +01:00
Peter Boyle
eb0925d702 Cleaing up 2015-04-18 16:42:47 +01:00
Peter Boyle
f678be5f94 Shaken out the peekIndex support. 
Hardwire constants "SpinIndex, ColourIndex" and LorentzIndex in Grid_QCD.h
 2015-04-18 16:17:41 +01:00
Peter Boyle
b47d33c4f1 Shaken out the peekIndex support. 
Hardwire constants "SpinIndex, ColourIndex" and LorentzIndex in Grid_QCD.h
 2015-04-18 16:17:41 +01:00
Peter Boyle
3e3df092bb Reorg of build structure 2015-04-18 14:55:00 +01:00
Peter Boyle
c656164015 Reorg of build structure 2015-04-18 14:55:00 +01:00