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https://github.com/paboyle/Grid.git
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82 lines
2.1 KiB
Bash
82 lines
2.1 KiB
Bash
#!/bin/bash
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#PBS -l select=16:system=sunspot,place=scatter
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#PBS -A LatticeQCD_aesp_CNDA
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#PBS -l walltime=02:00:00
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#PBS -N repro1gpu
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#PBS -k doe
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#export OMP_PROC_BIND=spread
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#unset OMP_PLACES
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module load oneapi/eng-compiler/2023.05.15.003
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module load mpich/51.2/icc-all-deterministic-pmix-gpu
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# 56 cores / 6 threads ~9
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export OMP_NUM_THREADS=6
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export MPIR_CVAR_CH4_OFI_ENABLE_GPU_PIPELINE=1
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_D2H_ENGINE_TYPE=0
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_H2D_ENGINE_TYPE=0
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export MPIR_CVAR_GPU_USE_IMMEDIATE_COMMAND_LIST=1
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_BUFFER_SZ=1048576
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_THRESHOLD=131072
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_NUM_BUFFERS_PER_CHUNK=16
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export MPIR_CVAR_CH4_OFI_GPU_PIPELINE_MAX_NUM_BUFFERS=16
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export MPICH_OFI_NIC_POLICY=GPU
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export MPIR_CVAR_ALLREDUCE_DEVICE_COLLECTIVE=0
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export MPIR_CVAR_REDUCE_DEVICE_COLLECTIVE=0
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export MPIR_CVAR_ALLREDUCE_INTRA_ALGORITHM=recursive_doubling
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unset MPIR_CVAR_CH4_COLL_SELECTION_TUNING_JSON_FILE
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unset MPIR_CVAR_COLL_SELECTION_TUNING_JSON_FILE
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unset MPIR_CVAR_CH4_POSIX_COLL_SELECTION_TUNING_JSON_FILE
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cd $PBS_O_WORKDIR
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NN=`cat $PBS_NODEFILE | wc -l`
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echo $PBS_NODEFILE
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cat $PBS_NODEFILE
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echo $NN nodes in node file
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for n in `eval echo {1..$NN}`
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do
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THIS_NODE=`head -n$n $PBS_NODEFILE | tail -n1 `
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echo Node $n is $THIS_NODE
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for g in {0..11}
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do
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export NUMA_MAP=(0 0 0 1 1 1 0 0 0 1 1 1 )
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export TILE_MAP=(0 0 0 0 0 0 1 1 1 1 1 1 )
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export GPU_MAP=(0 1 2 3 4 5 0 1 2 3 4 5 )
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export numa=${NUMA_MAP[$g]}
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export gpu_id=${GPU_MAP[$g]}
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export tile_id=${TILE_MAP[$g]}
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export gpu=$gpu_id.$tile_id
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cd $PBS_O_WORKDIR
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DIR=repro.1gpu.$PBS_JOBID/node-$n-$THIS_NODE-GPU-$gpu
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mkdir -p $DIR
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cd $DIR
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echo $THIS_NODE > nodefile
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echo $gpu > gpu
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export ZE_AFFINITY_MASK=$gpu
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export ONEAPI_DEVICE_FILTER=gpu,level_zero
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CMD="mpiexec -np 1 -ppn 1 -envall --hostfile nodefile \
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numactl -N $numa -m $numa ../../Test_dwf_mixedcg_prec --mpi 1.1.1.1 --grid 16.16.32.32 \
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--shm-mpi 0 --shm 4096 --device-mem 32000 --accelerator-threads 32 --seconds 6000 --debug-stdout --log Message"
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echo $CMD
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$CMD &
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done
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done
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wait
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