Peter Boyle dc814f30da Binary IO file for generic Grid array parallel I/O. ... Number of IO MPI tasks can be varied by selecting which dimensions use parallel IO and which dimensions use Serial send to boss I/O. Thus can neck down from, say 1024 nodes = 4x4x8x8 to {1,8,32,64,128,256,1024} nodes doing the I/O. Interpolates nicely between ALL nodes write their data, a single boss per time-plane in processor space [old UKQCD fortran code did this], and a single node doing all I/O. Not sure I have the transfer sizes big enough and am not overly convinced fstream is guaranteed to not give buffer inconsistencies unless I set streambuf size to zero. Practically it has worked on 8 tasks, 2x1x2x2 writing /cloning NERSC configurations on my MacOS + OpenMPI and Clang environment. It is VERY easy to switch to pwrite at a later date, and also easy to send x-strips around from each node in order to gather bigger chunks at the syscall level. That would push us up to the circa 8x 18*4*8 == 4KB size write chunk, and by taking, say, x/y non parallel we get to 16MB contiguous chunks written in multi 4KB transactions per IOnode in 64^3 lattices for configuration I/O. I suspect this is fine for system performance.		2015-08-26 13:40:29 +01:00
..
Make.inc	XMLReader implementation and a virtual Reader/Writer template framework.	2015-08-20 16:21:26 +01:00
Makefile.am	Assist for generating file lists contained in Make.inc files for convenience when things are added	2015-06-03 13:07:00 +01:00
Test_cayley_cg.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cayley_coarsen_support.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cayley_even_odd.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cayley_ldop_cr.cc	Binary IO file for generic Grid array parallel I/O.	2015-08-26 13:40:29 +01:00
Test_cf_coarsen_support.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cf_cr_unprec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cheby.cc	Test for DWF force term passes	2015-08-01 22:07:05 +09:00
Test_contfrac_cg.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_contfrac_even_odd.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_contfrac_force.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_cshift_red_black.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_cshift.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_dwf_cg_prec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_cg_schur.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_cg_unprec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_cr_unprec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_even_odd.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_force.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_fpgcr.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_dwf_hdcr.cc	Binary IO file for generic Grid array parallel I/O.	2015-08-26 13:40:29 +01:00
Test_gamma.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_GaugeAction.cc	Binary IO file for generic Grid array parallel I/O.	2015-08-26 13:40:29 +01:00
Test_gparity.cc	Gparity now accepting twists through constructor	2015-08-19 11:26:01 +01:00
Test_gpwilson_even_odd.cc	Extra test	2015-08-14 13:18:59 +01:00
test_Grid_jacobi.cc	Got unpreconditioned conjugate gradient to run and converge on a random (uniform random,	2015-05-19 13:57:35 +01:00
Test_hmc_EODWFRatio.cc	Domain wall even-odd 2f HMC with wilson gauge and PV 2f ratio now running and giving small dH.	2015-08-19 10:26:07 +01:00
Test_hmc_EOWilsonFermionGauge.cc	* Finished the template/policy style introduction of gparity, except the gparity force terms.	2015-08-15 23:25:49 +01:00
Test_hmc_EOWilsonRatio.cc	Even Odd two flavour ratio added and dH == small	2015-08-18 10:37:08 +01:00
Test_hmc_WilsonFermionGauge.cc	* Finished the template/policy style introduction of gparity, except the gparity force terms.	2015-08-15 23:25:49 +01:00
Test_hmc_WilsonGauge.cc	More NEON functionalities	2015-07-21 11:52:15 +09:00
Test_hmc_WilsonRatio.cc	Small dh obtained in two flavour ratio so looks ok.	2015-08-18 09:21:29 +01:00
Test_lie_generators.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_main.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_multishift_sqrt.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_nersc_io.cc	Binary IO file for generic Grid array parallel I/O.	2015-08-26 13:40:29 +01:00
Test_partfrac_force.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_quenched_update.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_remez.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_rhmc_EOWilson1p1.cc	EvenOdd schur decomposed mpcdagmpc version of rhmc determinant.	2015-08-18 18:37:39 +01:00
Test_rhmc_EOWilsonRatio.cc	Even odd preconditioned one flavour ratio	2015-08-19 05:46:58 +01:00
Test_rhmc_Wilson1p1.cc	rhmc for 1+1 wilson is conserving dH~0.	2015-08-18 16:58:56 +01:00
Test_rhmc_WilsonRatio.cc	Added one flavour rational ratios (unprec)	2015-08-19 04:58:40 +01:00
Test_rng_fixed.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_rng.cc	Sizable improvement in multigrid for unsquared.	2015-07-24 01:31:13 +09:00
Test_serialisation.cc	Separated IO reader/writers into a proper abstract base,	2015-08-21 10:06:33 +01:00
Test_simd.cc	Amending a merge mistake	2015-07-30 17:21:42 +09:00
Test_stencil.cc	Gparity valence test now working.	2015-08-14 00:01:04 +01:00
Test_wilson_cg_prec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_cg_schur.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_cg_unprec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_cr_unprec.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_even_odd.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_force_phiMdagMphi.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_force_phiMphi.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00
Test_wilson_force.cc	Rework/global edit to enforce type templating of fermion operators.	2015-08-10 20:47:44 +01:00