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COPYING
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COPYING
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GNU GENERAL PUBLIC LICENSE
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Version 3, 29 June 2007
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Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
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Everyone is permitted to copy and distribute verbatim copies
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Preamble
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The GNU General Public License is a free, copyleft license for
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Source of the work are being offered to the general public at no
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A separable portion of the object code, whose source code is excluded
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A "User Product" is either (1) a "consumer product", which means any
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"Installation Information" for a User Product means any methods,
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If you convey an object code work under this section in, or with, or
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Corresponding Source conveyed under this section must be accompanied
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The requirement to provide Installation Information does not include a
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Corresponding Source conveyed, and Installation Information provided,
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|
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|
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|
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"Additional permissions" are terms that supplement the terms of this
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When you convey a copy of a covered work, you may at your option
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remove any additional permissions from that copy, or from any part of
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|
||||||
removal in certain cases when you modify the work.) You may place
|
|
||||||
additional permissions on material, added by you to a covered work,
|
|
||||||
for which you have or can give appropriate copyright permission.
|
|
||||||
|
|
||||||
Notwithstanding any other provision of this License, for material you
|
|
||||||
add to a covered work, you may (if authorized by the copyright holders of
|
|
||||||
that material) supplement the terms of this License with terms:
|
|
||||||
|
|
||||||
a) Disclaiming warranty or limiting liability differently from the
|
|
||||||
terms of sections 15 and 16 of this License; or
|
|
||||||
|
|
||||||
b) Requiring preservation of specified reasonable legal notices or
|
|
||||||
author attributions in that material or in the Appropriate Legal
|
|
||||||
Notices displayed by works containing it; or
|
|
||||||
|
|
||||||
c) Prohibiting misrepresentation of the origin of that material, or
|
|
||||||
requiring that modified versions of such material be marked in
|
|
||||||
reasonable ways as different from the original version; or
|
|
||||||
|
|
||||||
d) Limiting the use for publicity purposes of names of licensors or
|
|
||||||
authors of the material; or
|
|
||||||
|
|
||||||
e) Declining to grant rights under trademark law for use of some
|
|
||||||
trade names, trademarks, or service marks; or
|
|
||||||
|
|
||||||
f) Requiring indemnification of licensors and authors of that
|
|
||||||
material by anyone who conveys the material (or modified versions of
|
|
||||||
it) with contractual assumptions of liability to the recipient, for
|
|
||||||
any liability that these contractual assumptions directly impose on
|
|
||||||
those licensors and authors.
|
|
||||||
|
|
||||||
All other non-permissive additional terms are considered "further
|
|
||||||
restrictions" within the meaning of section 10. If the Program as you
|
|
||||||
received it, or any part of it, contains a notice stating that it is
|
|
||||||
governed by this License along with a term that is a further
|
|
||||||
restriction, you may remove that term. If a license document contains
|
|
||||||
a further restriction but permits relicensing or conveying under this
|
|
||||||
License, you may add to a covered work material governed by the terms
|
|
||||||
of that license document, provided that the further restriction does
|
|
||||||
not survive such relicensing or conveying.
|
|
||||||
|
|
||||||
If you add terms to a covered work in accord with this section, you
|
|
||||||
must place, in the relevant source files, a statement of the
|
|
||||||
additional terms that apply to those files, or a notice indicating
|
|
||||||
where to find the applicable terms.
|
|
||||||
|
|
||||||
Additional terms, permissive or non-permissive, may be stated in the
|
|
||||||
form of a separately written license, or stated as exceptions;
|
|
||||||
the above requirements apply either way.
|
|
||||||
|
|
||||||
8. Termination.
|
|
||||||
|
|
||||||
You may not propagate or modify a covered work except as expressly
|
|
||||||
provided under this License. Any attempt otherwise to propagate or
|
|
||||||
modify it is void, and will automatically terminate your rights under
|
|
||||||
this License (including any patent licenses granted under the third
|
|
||||||
paragraph of section 11).
|
|
||||||
|
|
||||||
However, if you cease all violation of this License, then your
|
|
||||||
license from a particular copyright holder is reinstated (a)
|
|
||||||
provisionally, unless and until the copyright holder explicitly and
|
|
||||||
finally terminates your license, and (b) permanently, if the copyright
|
|
||||||
holder fails to notify you of the violation by some reasonable means
|
|
||||||
prior to 60 days after the cessation.
|
|
||||||
|
|
||||||
Moreover, your license from a particular copyright holder is
|
|
||||||
reinstated permanently if the copyright holder notifies you of the
|
|
||||||
violation by some reasonable means, this is the first time you have
|
|
||||||
received notice of violation of this License (for any work) from that
|
|
||||||
copyright holder, and you cure the violation prior to 30 days after
|
|
||||||
your receipt of the notice.
|
|
||||||
|
|
||||||
Termination of your rights under this section does not terminate the
|
|
||||||
licenses of parties who have received copies or rights from you under
|
|
||||||
this License. If your rights have been terminated and not permanently
|
|
||||||
reinstated, you do not qualify to receive new licenses for the same
|
|
||||||
material under section 10.
|
|
||||||
|
|
||||||
9. Acceptance Not Required for Having Copies.
|
|
||||||
|
|
||||||
You are not required to accept this License in order to receive or
|
|
||||||
run a copy of the Program. Ancillary propagation of a covered work
|
|
||||||
occurring solely as a consequence of using peer-to-peer transmission
|
|
||||||
to receive a copy likewise does not require acceptance. However,
|
|
||||||
nothing other than this License grants you permission to propagate or
|
|
||||||
modify any covered work. These actions infringe copyright if you do
|
|
||||||
not accept this License. Therefore, by modifying or propagating a
|
|
||||||
covered work, you indicate your acceptance of this License to do so.
|
|
||||||
|
|
||||||
10. Automatic Licensing of Downstream Recipients.
|
|
||||||
|
|
||||||
Each time you convey a covered work, the recipient automatically
|
|
||||||
receives a license from the original licensors, to run, modify and
|
|
||||||
propagate that work, subject to this License. You are not responsible
|
|
||||||
for enforcing compliance by third parties with this License.
|
|
||||||
|
|
||||||
An "entity transaction" is a transaction transferring control of an
|
|
||||||
organization, or substantially all assets of one, or subdividing an
|
|
||||||
organization, or merging organizations. If propagation of a covered
|
|
||||||
work results from an entity transaction, each party to that
|
|
||||||
transaction who receives a copy of the work also receives whatever
|
|
||||||
licenses to the work the party's predecessor in interest had or could
|
|
||||||
give under the previous paragraph, plus a right to possession of the
|
|
||||||
Corresponding Source of the work from the predecessor in interest, if
|
|
||||||
the predecessor has it or can get it with reasonable efforts.
|
|
||||||
|
|
||||||
You may not impose any further restrictions on the exercise of the
|
|
||||||
rights granted or affirmed under this License. For example, you may
|
|
||||||
not impose a license fee, royalty, or other charge for exercise of
|
|
||||||
rights granted under this License, and you may not initiate litigation
|
|
||||||
(including a cross-claim or counterclaim in a lawsuit) alleging that
|
|
||||||
any patent claim is infringed by making, using, selling, offering for
|
|
||||||
sale, or importing the Program or any portion of it.
|
|
||||||
|
|
||||||
11. Patents.
|
|
||||||
|
|
||||||
A "contributor" is a copyright holder who authorizes use under this
|
|
||||||
License of the Program or a work on which the Program is based. The
|
|
||||||
work thus licensed is called the contributor's "contributor version".
|
|
||||||
|
|
||||||
A contributor's "essential patent claims" are all patent claims
|
|
||||||
owned or controlled by the contributor, whether already acquired or
|
|
||||||
hereafter acquired, that would be infringed by some manner, permitted
|
|
||||||
by this License, of making, using, or selling its contributor version,
|
|
||||||
but do not include claims that would be infringed only as a
|
|
||||||
consequence of further modification of the contributor version. For
|
|
||||||
purposes of this definition, "control" includes the right to grant
|
|
||||||
patent sublicenses in a manner consistent with the requirements of
|
|
||||||
this License.
|
|
||||||
|
|
||||||
Each contributor grants you a non-exclusive, worldwide, royalty-free
|
|
||||||
patent license under the contributor's essential patent claims, to
|
|
||||||
make, use, sell, offer for sale, import and otherwise run, modify and
|
|
||||||
propagate the contents of its contributor version.
|
|
||||||
|
|
||||||
In the following three paragraphs, a "patent license" is any express
|
|
||||||
agreement or commitment, however denominated, not to enforce a patent
|
|
||||||
(such as an express permission to practice a patent or covenant not to
|
|
||||||
sue for patent infringement). To "grant" such a patent license to a
|
|
||||||
party means to make such an agreement or commitment not to enforce a
|
|
||||||
patent against the party.
|
|
||||||
|
|
||||||
If you convey a covered work, knowingly relying on a patent license,
|
|
||||||
and the Corresponding Source of the work is not available for anyone
|
|
||||||
to copy, free of charge and under the terms of this License, through a
|
|
||||||
publicly available network server or other readily accessible means,
|
|
||||||
then you must either (1) cause the Corresponding Source to be so
|
|
||||||
available, or (2) arrange to deprive yourself of the benefit of the
|
|
||||||
patent license for this particular work, or (3) arrange, in a manner
|
|
||||||
consistent with the requirements of this License, to extend the patent
|
|
||||||
license to downstream recipients. "Knowingly relying" means you have
|
|
||||||
actual knowledge that, but for the patent license, your conveying the
|
|
||||||
covered work in a country, or your recipient's use of the covered work
|
|
||||||
in a country, would infringe one or more identifiable patents in that
|
|
||||||
country that you have reason to believe are valid.
|
|
||||||
|
|
||||||
If, pursuant to or in connection with a single transaction or
|
|
||||||
arrangement, you convey, or propagate by procuring conveyance of, a
|
|
||||||
covered work, and grant a patent license to some of the parties
|
|
||||||
receiving the covered work authorizing them to use, propagate, modify
|
|
||||||
or convey a specific copy of the covered work, then the patent license
|
|
||||||
you grant is automatically extended to all recipients of the covered
|
|
||||||
work and works based on it.
|
|
||||||
|
|
||||||
A patent license is "discriminatory" if it does not include within
|
|
||||||
the scope of its coverage, prohibits the exercise of, or is
|
|
||||||
conditioned on the non-exercise of one or more of the rights that are
|
|
||||||
specifically granted under this License. You may not convey a covered
|
|
||||||
work if you are a party to an arrangement with a third party that is
|
|
||||||
in the business of distributing software, under which you make payment
|
|
||||||
to the third party based on the extent of your activity of conveying
|
|
||||||
the work, and under which the third party grants, to any of the
|
|
||||||
parties who would receive the covered work from you, a discriminatory
|
|
||||||
patent license (a) in connection with copies of the covered work
|
|
||||||
conveyed by you (or copies made from those copies), or (b) primarily
|
|
||||||
for and in connection with specific products or compilations that
|
|
||||||
contain the covered work, unless you entered into that arrangement,
|
|
||||||
or that patent license was granted, prior to 28 March 2007.
|
|
||||||
|
|
||||||
Nothing in this License shall be construed as excluding or limiting
|
|
||||||
any implied license or other defenses to infringement that may
|
|
||||||
otherwise be available to you under applicable patent law.
|
|
||||||
|
|
||||||
12. No Surrender of Others' Freedom.
|
|
||||||
|
|
||||||
If conditions are imposed on you (whether by court order, agreement or
|
|
||||||
otherwise) that contradict the conditions of this License, they do not
|
|
||||||
excuse you from the conditions of this License. If you cannot convey a
|
|
||||||
covered work so as to satisfy simultaneously your obligations under this
|
|
||||||
License and any other pertinent obligations, then as a consequence you may
|
|
||||||
not convey it at all. For example, if you agree to terms that obligate you
|
|
||||||
to collect a royalty for further conveying from those to whom you convey
|
|
||||||
the Program, the only way you could satisfy both those terms and this
|
|
||||||
License would be to refrain entirely from conveying the Program.
|
|
||||||
|
|
||||||
13. Use with the GNU Affero General Public License.
|
|
||||||
|
|
||||||
Notwithstanding any other provision of this License, you have
|
|
||||||
permission to link or combine any covered work with a work licensed
|
|
||||||
under version 3 of the GNU Affero General Public License into a single
|
|
||||||
combined work, and to convey the resulting work. The terms of this
|
|
||||||
License will continue to apply to the part which is the covered work,
|
|
||||||
but the special requirements of the GNU Affero General Public License,
|
|
||||||
section 13, concerning interaction through a network will apply to the
|
|
||||||
combination as such.
|
|
||||||
|
|
||||||
14. Revised Versions of this License.
|
|
||||||
|
|
||||||
The Free Software Foundation may publish revised and/or new versions of
|
|
||||||
the GNU General Public License from time to time. Such new versions will
|
|
||||||
be similar in spirit to the present version, but may differ in detail to
|
|
||||||
address new problems or concerns.
|
|
||||||
|
|
||||||
Each version is given a distinguishing version number. If the
|
|
||||||
Program specifies that a certain numbered version of the GNU General
|
|
||||||
Public License "or any later version" applies to it, you have the
|
|
||||||
option of following the terms and conditions either of that numbered
|
|
||||||
version or of any later version published by the Free Software
|
|
||||||
Foundation. If the Program does not specify a version number of the
|
|
||||||
GNU General Public License, you may choose any version ever published
|
|
||||||
by the Free Software Foundation.
|
|
||||||
|
|
||||||
If the Program specifies that a proxy can decide which future
|
|
||||||
versions of the GNU General Public License can be used, that proxy's
|
|
||||||
public statement of acceptance of a version permanently authorizes you
|
|
||||||
to choose that version for the Program.
|
|
||||||
|
|
||||||
Later license versions may give you additional or different
|
|
||||||
permissions. However, no additional obligations are imposed on any
|
|
||||||
author or copyright holder as a result of your choosing to follow a
|
|
||||||
later version.
|
|
||||||
|
|
||||||
15. Disclaimer of Warranty.
|
|
||||||
|
|
||||||
THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY
|
|
||||||
APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT
|
|
||||||
HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY
|
|
||||||
OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO,
|
|
||||||
THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
|
|
||||||
PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
|
|
||||||
IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
|
|
||||||
ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
|
|
||||||
|
|
||||||
16. Limitation of Liability.
|
|
||||||
|
|
||||||
IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
|
|
||||||
WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
|
|
||||||
THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
|
|
||||||
GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
|
|
||||||
USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
|
|
||||||
DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
|
|
||||||
PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
|
|
||||||
EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
|
|
||||||
SUCH DAMAGES.
|
|
||||||
|
|
||||||
17. Interpretation of Sections 15 and 16.
|
|
||||||
|
|
||||||
If the disclaimer of warranty and limitation of liability provided
|
|
||||||
above cannot be given local legal effect according to their terms,
|
|
||||||
reviewing courts shall apply local law that most closely approximates
|
|
||||||
an absolute waiver of all civil liability in connection with the
|
|
||||||
Program, unless a warranty or assumption of liability accompanies a
|
|
||||||
copy of the Program in return for a fee.
|
|
||||||
|
|
||||||
END OF TERMS AND CONDITIONS
|
|
||||||
|
|
||||||
How to Apply These Terms to Your New Programs
|
|
||||||
|
|
||||||
If you develop a new program, and you want it to be of the greatest
|
|
||||||
possible use to the public, the best way to achieve this is to make it
|
|
||||||
free software which everyone can redistribute and change under these terms.
|
|
||||||
|
|
||||||
To do so, attach the following notices to the program. It is safest
|
|
||||||
to attach them to the start of each source file to most effectively
|
|
||||||
state the exclusion of warranty; and each file should have at least
|
|
||||||
the "copyright" line and a pointer to where the full notice is found.
|
|
||||||
|
|
||||||
<one line to give the program's name and a brief idea of what it does.>
|
|
||||||
Copyright (C) <year> <name of author>
|
|
||||||
|
|
||||||
This program is free software: you can redistribute it and/or modify
|
|
||||||
it under the terms of the GNU General Public License as published by
|
|
||||||
the Free Software Foundation, either version 3 of the License, or
|
|
||||||
(at your option) any later version.
|
|
||||||
|
|
||||||
This program is distributed in the hope that it will be useful,
|
|
||||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
||||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
||||||
GNU General Public License for more details.
|
|
||||||
|
|
||||||
You should have received a copy of the GNU General Public License
|
|
||||||
along with this program. If not, see <http://www.gnu.org/licenses/>.
|
|
||||||
|
|
||||||
Also add information on how to contact you by electronic and paper mail.
|
|
||||||
|
|
||||||
If the program does terminal interaction, make it output a short
|
|
||||||
notice like this when it starts in an interactive mode:
|
|
||||||
|
|
||||||
<program> Copyright (C) <year> <name of author>
|
|
||||||
This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
|
|
||||||
This is free software, and you are welcome to redistribute it
|
|
||||||
under certain conditions; type `show c' for details.
|
|
||||||
|
|
||||||
The hypothetical commands `show w' and `show c' should show the appropriate
|
|
||||||
parts of the General Public License. Of course, your program's commands
|
|
||||||
might be different; for a GUI interface, you would use an "about box".
|
|
||||||
|
|
||||||
You should also get your employer (if you work as a programmer) or school,
|
|
||||||
if any, to sign a "copyright disclaimer" for the program, if necessary.
|
|
||||||
For more information on this, and how to apply and follow the GNU GPL, see
|
|
||||||
<http://www.gnu.org/licenses/>.
|
|
||||||
|
|
||||||
The GNU General Public License does not permit incorporating your program
|
|
||||||
into proprietary programs. If your program is a subroutine library, you
|
|
||||||
may consider it more useful to permit linking proprietary applications with
|
|
||||||
the library. If this is what you want to do, use the GNU Lesser General
|
|
||||||
Public License instead of this License. But first, please read
|
|
||||||
<http://www.gnu.org/philosophy/why-not-lgpl.html>.
|
|
||||||
370
INSTALL
370
INSTALL
@ -1,370 +0,0 @@
|
|||||||
Installation Instructions
|
|
||||||
*************************
|
|
||||||
|
|
||||||
Copyright (C) 1994-1996, 1999-2002, 2004-2013 Free Software Foundation,
|
|
||||||
Inc.
|
|
||||||
|
|
||||||
Copying and distribution of this file, with or without modification,
|
|
||||||
are permitted in any medium without royalty provided the copyright
|
|
||||||
notice and this notice are preserved. This file is offered as-is,
|
|
||||||
without warranty of any kind.
|
|
||||||
|
|
||||||
Basic Installation
|
|
||||||
==================
|
|
||||||
|
|
||||||
Briefly, the shell commands `./configure; make; make install' should
|
|
||||||
configure, build, and install this package. The following
|
|
||||||
more-detailed instructions are generic; see the `README' file for
|
|
||||||
instructions specific to this package. Some packages provide this
|
|
||||||
`INSTALL' file but do not implement all of the features documented
|
|
||||||
below. The lack of an optional feature in a given package is not
|
|
||||||
necessarily a bug. More recommendations for GNU packages can be found
|
|
||||||
in *note Makefile Conventions: (standards)Makefile Conventions.
|
|
||||||
|
|
||||||
The `configure' shell script attempts to guess correct values for
|
|
||||||
various system-dependent variables used during compilation. It uses
|
|
||||||
those values to create a `Makefile' in each directory of the package.
|
|
||||||
It may also create one or more `.h' files containing system-dependent
|
|
||||||
definitions. Finally, it creates a shell script `config.status' that
|
|
||||||
you can run in the future to recreate the current configuration, and a
|
|
||||||
file `config.log' containing compiler output (useful mainly for
|
|
||||||
debugging `configure').
|
|
||||||
|
|
||||||
It can also use an optional file (typically called `config.cache'
|
|
||||||
and enabled with `--cache-file=config.cache' or simply `-C') that saves
|
|
||||||
the results of its tests to speed up reconfiguring. Caching is
|
|
||||||
disabled by default to prevent problems with accidental use of stale
|
|
||||||
cache files.
|
|
||||||
|
|
||||||
If you need to do unusual things to compile the package, please try
|
|
||||||
to figure out how `configure' could check whether to do them, and mail
|
|
||||||
diffs or instructions to the address given in the `README' so they can
|
|
||||||
be considered for the next release. If you are using the cache, and at
|
|
||||||
some point `config.cache' contains results you don't want to keep, you
|
|
||||||
may remove or edit it.
|
|
||||||
|
|
||||||
The file `configure.ac' (or `configure.in') is used to create
|
|
||||||
`configure' by a program called `autoconf'. You need `configure.ac' if
|
|
||||||
you want to change it or regenerate `configure' using a newer version
|
|
||||||
of `autoconf'.
|
|
||||||
|
|
||||||
The simplest way to compile this package is:
|
|
||||||
|
|
||||||
1. `cd' to the directory containing the package's source code and type
|
|
||||||
`./configure' to configure the package for your system.
|
|
||||||
|
|
||||||
Running `configure' might take a while. While running, it prints
|
|
||||||
some messages telling which features it is checking for.
|
|
||||||
|
|
||||||
2. Type `make' to compile the package.
|
|
||||||
|
|
||||||
3. Optionally, type `make check' to run any self-tests that come with
|
|
||||||
the package, generally using the just-built uninstalled binaries.
|
|
||||||
|
|
||||||
4. Type `make install' to install the programs and any data files and
|
|
||||||
documentation. When installing into a prefix owned by root, it is
|
|
||||||
recommended that the package be configured and built as a regular
|
|
||||||
user, and only the `make install' phase executed with root
|
|
||||||
privileges.
|
|
||||||
|
|
||||||
5. Optionally, type `make installcheck' to repeat any self-tests, but
|
|
||||||
this time using the binaries in their final installed location.
|
|
||||||
This target does not install anything. Running this target as a
|
|
||||||
regular user, particularly if the prior `make install' required
|
|
||||||
root privileges, verifies that the installation completed
|
|
||||||
correctly.
|
|
||||||
|
|
||||||
6. You can remove the program binaries and object files from the
|
|
||||||
source code directory by typing `make clean'. To also remove the
|
|
||||||
files that `configure' created (so you can compile the package for
|
|
||||||
a different kind of computer), type `make distclean'. There is
|
|
||||||
also a `make maintainer-clean' target, but that is intended mainly
|
|
||||||
for the package's developers. If you use it, you may have to get
|
|
||||||
all sorts of other programs in order to regenerate files that came
|
|
||||||
with the distribution.
|
|
||||||
|
|
||||||
7. Often, you can also type `make uninstall' to remove the installed
|
|
||||||
files again. In practice, not all packages have tested that
|
|
||||||
uninstallation works correctly, even though it is required by the
|
|
||||||
GNU Coding Standards.
|
|
||||||
|
|
||||||
8. Some packages, particularly those that use Automake, provide `make
|
|
||||||
distcheck', which can by used by developers to test that all other
|
|
||||||
targets like `make install' and `make uninstall' work correctly.
|
|
||||||
This target is generally not run by end users.
|
|
||||||
|
|
||||||
Compilers and Options
|
|
||||||
=====================
|
|
||||||
|
|
||||||
Some systems require unusual options for compilation or linking that
|
|
||||||
the `configure' script does not know about. Run `./configure --help'
|
|
||||||
for details on some of the pertinent environment variables.
|
|
||||||
|
|
||||||
You can give `configure' initial values for configuration parameters
|
|
||||||
by setting variables in the command line or in the environment. Here
|
|
||||||
is an example:
|
|
||||||
|
|
||||||
./configure CC=c99 CFLAGS=-g LIBS=-lposix
|
|
||||||
|
|
||||||
*Note Defining Variables::, for more details.
|
|
||||||
|
|
||||||
Compiling For Multiple Architectures
|
|
||||||
====================================
|
|
||||||
|
|
||||||
You can compile the package for more than one kind of computer at the
|
|
||||||
same time, by placing the object files for each architecture in their
|
|
||||||
own directory. To do this, you can use GNU `make'. `cd' to the
|
|
||||||
directory where you want the object files and executables to go and run
|
|
||||||
the `configure' script. `configure' automatically checks for the
|
|
||||||
source code in the directory that `configure' is in and in `..'. This
|
|
||||||
is known as a "VPATH" build.
|
|
||||||
|
|
||||||
With a non-GNU `make', it is safer to compile the package for one
|
|
||||||
architecture at a time in the source code directory. After you have
|
|
||||||
installed the package for one architecture, use `make distclean' before
|
|
||||||
reconfiguring for another architecture.
|
|
||||||
|
|
||||||
On MacOS X 10.5 and later systems, you can create libraries and
|
|
||||||
executables that work on multiple system types--known as "fat" or
|
|
||||||
"universal" binaries--by specifying multiple `-arch' options to the
|
|
||||||
compiler but only a single `-arch' option to the preprocessor. Like
|
|
||||||
this:
|
|
||||||
|
|
||||||
./configure CC="gcc -arch i386 -arch x86_64 -arch ppc -arch ppc64" \
|
|
||||||
CXX="g++ -arch i386 -arch x86_64 -arch ppc -arch ppc64" \
|
|
||||||
CPP="gcc -E" CXXCPP="g++ -E"
|
|
||||||
|
|
||||||
This is not guaranteed to produce working output in all cases, you
|
|
||||||
may have to build one architecture at a time and combine the results
|
|
||||||
using the `lipo' tool if you have problems.
|
|
||||||
|
|
||||||
Installation Names
|
|
||||||
==================
|
|
||||||
|
|
||||||
By default, `make install' installs the package's commands under
|
|
||||||
`/usr/local/bin', include files under `/usr/local/include', etc. You
|
|
||||||
can specify an installation prefix other than `/usr/local' by giving
|
|
||||||
`configure' the option `--prefix=PREFIX', where PREFIX must be an
|
|
||||||
absolute file name.
|
|
||||||
|
|
||||||
You can specify separate installation prefixes for
|
|
||||||
architecture-specific files and architecture-independent files. If you
|
|
||||||
pass the option `--exec-prefix=PREFIX' to `configure', the package uses
|
|
||||||
PREFIX as the prefix for installing programs and libraries.
|
|
||||||
Documentation and other data files still use the regular prefix.
|
|
||||||
|
|
||||||
In addition, if you use an unusual directory layout you can give
|
|
||||||
options like `--bindir=DIR' to specify different values for particular
|
|
||||||
kinds of files. Run `configure --help' for a list of the directories
|
|
||||||
you can set and what kinds of files go in them. In general, the
|
|
||||||
default for these options is expressed in terms of `${prefix}', so that
|
|
||||||
specifying just `--prefix' will affect all of the other directory
|
|
||||||
specifications that were not explicitly provided.
|
|
||||||
|
|
||||||
The most portable way to affect installation locations is to pass the
|
|
||||||
correct locations to `configure'; however, many packages provide one or
|
|
||||||
both of the following shortcuts of passing variable assignments to the
|
|
||||||
`make install' command line to change installation locations without
|
|
||||||
having to reconfigure or recompile.
|
|
||||||
|
|
||||||
The first method involves providing an override variable for each
|
|
||||||
affected directory. For example, `make install
|
|
||||||
prefix=/alternate/directory' will choose an alternate location for all
|
|
||||||
directory configuration variables that were expressed in terms of
|
|
||||||
`${prefix}'. Any directories that were specified during `configure',
|
|
||||||
but not in terms of `${prefix}', must each be overridden at install
|
|
||||||
time for the entire installation to be relocated. The approach of
|
|
||||||
makefile variable overrides for each directory variable is required by
|
|
||||||
the GNU Coding Standards, and ideally causes no recompilation.
|
|
||||||
However, some platforms have known limitations with the semantics of
|
|
||||||
shared libraries that end up requiring recompilation when using this
|
|
||||||
method, particularly noticeable in packages that use GNU Libtool.
|
|
||||||
|
|
||||||
The second method involves providing the `DESTDIR' variable. For
|
|
||||||
example, `make install DESTDIR=/alternate/directory' will prepend
|
|
||||||
`/alternate/directory' before all installation names. The approach of
|
|
||||||
`DESTDIR' overrides is not required by the GNU Coding Standards, and
|
|
||||||
does not work on platforms that have drive letters. On the other hand,
|
|
||||||
it does better at avoiding recompilation issues, and works well even
|
|
||||||
when some directory options were not specified in terms of `${prefix}'
|
|
||||||
at `configure' time.
|
|
||||||
|
|
||||||
Optional Features
|
|
||||||
=================
|
|
||||||
|
|
||||||
If the package supports it, you can cause programs to be installed
|
|
||||||
with an extra prefix or suffix on their names by giving `configure' the
|
|
||||||
option `--program-prefix=PREFIX' or `--program-suffix=SUFFIX'.
|
|
||||||
|
|
||||||
Some packages pay attention to `--enable-FEATURE' options to
|
|
||||||
`configure', where FEATURE indicates an optional part of the package.
|
|
||||||
They may also pay attention to `--with-PACKAGE' options, where PACKAGE
|
|
||||||
is something like `gnu-as' or `x' (for the X Window System). The
|
|
||||||
`README' should mention any `--enable-' and `--with-' options that the
|
|
||||||
package recognizes.
|
|
||||||
|
|
||||||
For packages that use the X Window System, `configure' can usually
|
|
||||||
find the X include and library files automatically, but if it doesn't,
|
|
||||||
you can use the `configure' options `--x-includes=DIR' and
|
|
||||||
`--x-libraries=DIR' to specify their locations.
|
|
||||||
|
|
||||||
Some packages offer the ability to configure how verbose the
|
|
||||||
execution of `make' will be. For these packages, running `./configure
|
|
||||||
--enable-silent-rules' sets the default to minimal output, which can be
|
|
||||||
overridden with `make V=1'; while running `./configure
|
|
||||||
--disable-silent-rules' sets the default to verbose, which can be
|
|
||||||
overridden with `make V=0'.
|
|
||||||
|
|
||||||
Particular systems
|
|
||||||
==================
|
|
||||||
|
|
||||||
On HP-UX, the default C compiler is not ANSI C compatible. If GNU
|
|
||||||
CC is not installed, it is recommended to use the following options in
|
|
||||||
order to use an ANSI C compiler:
|
|
||||||
|
|
||||||
./configure CC="cc -Ae -D_XOPEN_SOURCE=500"
|
|
||||||
|
|
||||||
and if that doesn't work, install pre-built binaries of GCC for HP-UX.
|
|
||||||
|
|
||||||
HP-UX `make' updates targets which have the same time stamps as
|
|
||||||
their prerequisites, which makes it generally unusable when shipped
|
|
||||||
generated files such as `configure' are involved. Use GNU `make'
|
|
||||||
instead.
|
|
||||||
|
|
||||||
On OSF/1 a.k.a. Tru64, some versions of the default C compiler cannot
|
|
||||||
parse its `<wchar.h>' header file. The option `-nodtk' can be used as
|
|
||||||
a workaround. If GNU CC is not installed, it is therefore recommended
|
|
||||||
to try
|
|
||||||
|
|
||||||
./configure CC="cc"
|
|
||||||
|
|
||||||
and if that doesn't work, try
|
|
||||||
|
|
||||||
./configure CC="cc -nodtk"
|
|
||||||
|
|
||||||
On Solaris, don't put `/usr/ucb' early in your `PATH'. This
|
|
||||||
directory contains several dysfunctional programs; working variants of
|
|
||||||
these programs are available in `/usr/bin'. So, if you need `/usr/ucb'
|
|
||||||
in your `PATH', put it _after_ `/usr/bin'.
|
|
||||||
|
|
||||||
On Haiku, software installed for all users goes in `/boot/common',
|
|
||||||
not `/usr/local'. It is recommended to use the following options:
|
|
||||||
|
|
||||||
./configure --prefix=/boot/common
|
|
||||||
|
|
||||||
Specifying the System Type
|
|
||||||
==========================
|
|
||||||
|
|
||||||
There may be some features `configure' cannot figure out
|
|
||||||
automatically, but needs to determine by the type of machine the package
|
|
||||||
will run on. Usually, assuming the package is built to be run on the
|
|
||||||
_same_ architectures, `configure' can figure that out, but if it prints
|
|
||||||
a message saying it cannot guess the machine type, give it the
|
|
||||||
`--build=TYPE' option. TYPE can either be a short name for the system
|
|
||||||
type, such as `sun4', or a canonical name which has the form:
|
|
||||||
|
|
||||||
CPU-COMPANY-SYSTEM
|
|
||||||
|
|
||||||
where SYSTEM can have one of these forms:
|
|
||||||
|
|
||||||
OS
|
|
||||||
KERNEL-OS
|
|
||||||
|
|
||||||
See the file `config.sub' for the possible values of each field. If
|
|
||||||
`config.sub' isn't included in this package, then this package doesn't
|
|
||||||
need to know the machine type.
|
|
||||||
|
|
||||||
If you are _building_ compiler tools for cross-compiling, you should
|
|
||||||
use the option `--target=TYPE' to select the type of system they will
|
|
||||||
produce code for.
|
|
||||||
|
|
||||||
If you want to _use_ a cross compiler, that generates code for a
|
|
||||||
platform different from the build platform, you should specify the
|
|
||||||
"host" platform (i.e., that on which the generated programs will
|
|
||||||
eventually be run) with `--host=TYPE'.
|
|
||||||
|
|
||||||
Sharing Defaults
|
|
||||||
================
|
|
||||||
|
|
||||||
If you want to set default values for `configure' scripts to share,
|
|
||||||
you can create a site shell script called `config.site' that gives
|
|
||||||
default values for variables like `CC', `cache_file', and `prefix'.
|
|
||||||
`configure' looks for `PREFIX/share/config.site' if it exists, then
|
|
||||||
`PREFIX/etc/config.site' if it exists. Or, you can set the
|
|
||||||
`CONFIG_SITE' environment variable to the location of the site script.
|
|
||||||
A warning: not all `configure' scripts look for a site script.
|
|
||||||
|
|
||||||
Defining Variables
|
|
||||||
==================
|
|
||||||
|
|
||||||
Variables not defined in a site shell script can be set in the
|
|
||||||
environment passed to `configure'. However, some packages may run
|
|
||||||
configure again during the build, and the customized values of these
|
|
||||||
variables may be lost. In order to avoid this problem, you should set
|
|
||||||
them in the `configure' command line, using `VAR=value'. For example:
|
|
||||||
|
|
||||||
./configure CC=/usr/local2/bin/gcc
|
|
||||||
|
|
||||||
causes the specified `gcc' to be used as the C compiler (unless it is
|
|
||||||
overridden in the site shell script).
|
|
||||||
|
|
||||||
Unfortunately, this technique does not work for `CONFIG_SHELL' due to
|
|
||||||
an Autoconf limitation. Until the limitation is lifted, you can use
|
|
||||||
this workaround:
|
|
||||||
|
|
||||||
CONFIG_SHELL=/bin/bash ./configure CONFIG_SHELL=/bin/bash
|
|
||||||
|
|
||||||
`configure' Invocation
|
|
||||||
======================
|
|
||||||
|
|
||||||
`configure' recognizes the following options to control how it
|
|
||||||
operates.
|
|
||||||
|
|
||||||
`--help'
|
|
||||||
`-h'
|
|
||||||
Print a summary of all of the options to `configure', and exit.
|
|
||||||
|
|
||||||
`--help=short'
|
|
||||||
`--help=recursive'
|
|
||||||
Print a summary of the options unique to this package's
|
|
||||||
`configure', and exit. The `short' variant lists options used
|
|
||||||
only in the top level, while the `recursive' variant lists options
|
|
||||||
also present in any nested packages.
|
|
||||||
|
|
||||||
`--version'
|
|
||||||
`-V'
|
|
||||||
Print the version of Autoconf used to generate the `configure'
|
|
||||||
script, and exit.
|
|
||||||
|
|
||||||
`--cache-file=FILE'
|
|
||||||
Enable the cache: use and save the results of the tests in FILE,
|
|
||||||
traditionally `config.cache'. FILE defaults to `/dev/null' to
|
|
||||||
disable caching.
|
|
||||||
|
|
||||||
`--config-cache'
|
|
||||||
`-C'
|
|
||||||
Alias for `--cache-file=config.cache'.
|
|
||||||
|
|
||||||
`--quiet'
|
|
||||||
`--silent'
|
|
||||||
`-q'
|
|
||||||
Do not print messages saying which checks are being made. To
|
|
||||||
suppress all normal output, redirect it to `/dev/null' (any error
|
|
||||||
messages will still be shown).
|
|
||||||
|
|
||||||
`--srcdir=DIR'
|
|
||||||
Look for the package's source code in directory DIR. Usually
|
|
||||||
`configure' can determine that directory automatically.
|
|
||||||
|
|
||||||
`--prefix=DIR'
|
|
||||||
Use DIR as the installation prefix. *note Installation Names::
|
|
||||||
for more details, including other options available for fine-tuning
|
|
||||||
the installation locations.
|
|
||||||
|
|
||||||
`--no-create'
|
|
||||||
`-n'
|
|
||||||
Run the configure checks, but stop before creating any output
|
|
||||||
files.
|
|
||||||
|
|
||||||
`configure' also accepts some other, not widely useful, options. Run
|
|
||||||
`configure --help' for more details.
|
|
||||||
@ -1,7 +1,5 @@
|
|||||||
#!/usr/bin/env bash
|
#!/usr/bin/env bash
|
||||||
|
|
||||||
echo "extracting Eigen headers..."
|
|
||||||
./update_eigen.sh eigen-eigen-*.tar.bz2
|
|
||||||
rm -rf .buildutils
|
rm -rf .buildutils
|
||||||
mkdir -p .buildutils/m4
|
mkdir -p .buildutils/m4
|
||||||
autoreconf -fvi
|
autoreconf -fvi
|
||||||
|
|||||||
11
configure.ac
11
configure.ac
@ -8,7 +8,7 @@ AC_CONFIG_SRCDIR([lib/Global.cpp])
|
|||||||
AC_CONFIG_SRCDIR([utils/sample_read.cpp])
|
AC_CONFIG_SRCDIR([utils/sample_read.cpp])
|
||||||
AC_CONFIG_SRCDIR([examples/exMathInterpreter.cpp])
|
AC_CONFIG_SRCDIR([examples/exMathInterpreter.cpp])
|
||||||
AC_CONFIG_MACRO_DIR([.buildutils/m4])
|
AC_CONFIG_MACRO_DIR([.buildutils/m4])
|
||||||
AM_INIT_AUTOMAKE([-Wall -Werror subdir-objects])
|
AM_INIT_AUTOMAKE([-Wall -Werror foreign])
|
||||||
AM_SILENT_RULES([yes])
|
AM_SILENT_RULES([yes])
|
||||||
AC_CONFIG_HEADERS([config.h])
|
AC_CONFIG_HEADERS([config.h])
|
||||||
|
|
||||||
@ -51,6 +51,13 @@ AC_ARG_WITH([Minuit2],
|
|||||||
[AM_LDFLAGS="$AM_LDFLAGS -L$with_Minuit2/lib"],
|
[AM_LDFLAGS="$AM_LDFLAGS -L$with_Minuit2/lib"],
|
||||||
[]
|
[]
|
||||||
)
|
)
|
||||||
|
AC_ARG_WITH([LatCore],
|
||||||
|
[AS_HELP_STRING([--with-LatCore=prefix],
|
||||||
|
[use this option for a non-standard install prefix of the LatCore library])],
|
||||||
|
[AM_CXXFLAGS="$AM_CXXFLAGS -I$with_LatCore/include"]
|
||||||
|
[AM_LDFLAGS="$AM_LDFLAGS -L$with_LatCore/lib"],
|
||||||
|
[]
|
||||||
|
)
|
||||||
|
|
||||||
CFLAGS="$AM_CFLAGS $CFLAGS"
|
CFLAGS="$AM_CFLAGS $CFLAGS"
|
||||||
CXXFLAGS="$AM_CXXFLAGS $CXXFLAGS"
|
CXXFLAGS="$AM_CXXFLAGS $CXXFLAGS"
|
||||||
@ -79,6 +86,8 @@ AC_DEFINE_UNQUOTED([GXX_VERSION],["$GXX_VERSION"],
|
|||||||
# Checks for libraries.
|
# Checks for libraries.
|
||||||
AC_CHECK_LIB([m],[cos],[],[AC_MSG_ERROR([libm library not found])])
|
AC_CHECK_LIB([m],[cos],[],[AC_MSG_ERROR([libm library not found])])
|
||||||
AC_CHECK_LIB([gsl],[gsl_blas_dgemm],[LIBS="$LIBS -lgsl -lgslcblas"],[AC_MSG_ERROR([GSL library not found])])
|
AC_CHECK_LIB([gsl],[gsl_blas_dgemm],[LIBS="$LIBS -lgsl -lgslcblas"],[AC_MSG_ERROR([GSL library not found])])
|
||||||
|
AC_CHECK_LIB([LatCore],[_ZN7LatCore12testFunctionEv],[],
|
||||||
|
[AC_MSG_ERROR([LatCore library not found])])
|
||||||
SAVED_LDFLAGS=$LDFLAGS
|
SAVED_LDFLAGS=$LDFLAGS
|
||||||
LDFLAGS="$LDFLAGS -lMinuit2"
|
LDFLAGS="$LDFLAGS -lMinuit2"
|
||||||
AC_MSG_CHECKING([for ROOT::Minuit2::BasicMinimumError in -lMinuit2]);
|
AC_MSG_CHECKING([for ROOT::Minuit2::BasicMinimumError in -lMinuit2]);
|
||||||
|
|||||||
Binary file not shown.
@ -146,7 +146,7 @@ void Chi2Function::resizeBuffer(void) const
|
|||||||
|
|
||||||
// compute variance matrix inverse /////////////////////////////////////////////
|
// compute variance matrix inverse /////////////////////////////////////////////
|
||||||
void Chi2Function::setVarianceBlock(const Index l1, const Index l2,
|
void Chi2Function::setVarianceBlock(const Index l1, const Index l2,
|
||||||
ConstBlock<DMatBase> m) const
|
ConstBlock<MatBase<double>> m) const
|
||||||
{
|
{
|
||||||
const Index nPoint = data_.getNFitPoint();
|
const Index nPoint = data_.getNFitPoint();
|
||||||
|
|
||||||
|
|||||||
@ -67,7 +67,7 @@ private:
|
|||||||
|
|
||||||
// compute variance matrix inverse
|
// compute variance matrix inverse
|
||||||
void setVarianceBlock(const Index l1, const Index l2,
|
void setVarianceBlock(const Index l1, const Index l2,
|
||||||
ConstBlock<DMatBase> m) const;
|
ConstBlock<MatBase<double>> m) const;
|
||||||
void initBuffer(void) const;
|
void initBuffer(void) const;
|
||||||
private:
|
private:
|
||||||
const XYStatData &data_;
|
const XYStatData &data_;
|
||||||
|
|||||||
@ -31,22 +31,3 @@ const string Env::msgPrefix = "[" + strFrom(PACKAGE_NAME) + " v"
|
|||||||
|
|
||||||
void Env::function(void)
|
void Env::function(void)
|
||||||
{}
|
{}
|
||||||
|
|
||||||
ostream & Latan::operator<<(ostream &out, const ProgressBar &&bar)
|
|
||||||
{
|
|
||||||
const Index nTick = bar.nCol_*bar.current_/bar.total_;
|
|
||||||
|
|
||||||
out << "[";
|
|
||||||
for (Index i = 0; i < nTick; ++i)
|
|
||||||
{
|
|
||||||
out << "=";
|
|
||||||
}
|
|
||||||
for (Index i = nTick; i < bar.nCol_; ++i)
|
|
||||||
{
|
|
||||||
out << " ";
|
|
||||||
}
|
|
||||||
out << "] " << bar.current_ << "/" << bar.total_;
|
|
||||||
out.flush();
|
|
||||||
|
|
||||||
return out;
|
|
||||||
}
|
|
||||||
|
|||||||
238
lib/Global.hpp
238
lib/Global.hpp
@ -20,10 +20,7 @@
|
|||||||
#ifndef Latan_Global_hpp_
|
#ifndef Latan_Global_hpp_
|
||||||
#define Latan_Global_hpp_
|
#define Latan_Global_hpp_
|
||||||
|
|
||||||
// supress warning for the osbolete use of 'register' keyword in Eigen
|
#include <LatCore/LatCore.hpp>
|
||||||
#pragma GCC diagnostic ignored "-Wdeprecated-register"
|
|
||||||
|
|
||||||
#include <LatAnalyze/Eigen/Dense>
|
|
||||||
#include <complex>
|
#include <complex>
|
||||||
#include <fstream>
|
#include <fstream>
|
||||||
#include <iostream>
|
#include <iostream>
|
||||||
@ -34,117 +31,18 @@
|
|||||||
#include <vector>
|
#include <vector>
|
||||||
#include <cstdlib>
|
#include <cstdlib>
|
||||||
|
|
||||||
#define BEGIN_LATAN_NAMESPACE namespace Latan {
|
#define BEGIN_LATAN_NAMESPACE \
|
||||||
|
namespace Latan {\
|
||||||
|
using namespace LatCore;
|
||||||
#define END_LATAN_NAMESPACE }
|
#define END_LATAN_NAMESPACE }
|
||||||
|
|
||||||
// macro utilities
|
|
||||||
#define unique_arg(...) __VA_ARGS__
|
|
||||||
#define DEBUG_VAR(x) std::cout << #x << "= " << x << std::endl
|
|
||||||
#define DEBUG_MAT(m) std::cout << #m << "=\n" << m << std::endl
|
|
||||||
|
|
||||||
// attribute to switch off unused warnings with gcc
|
|
||||||
#ifndef __GNUC__
|
|
||||||
#define __unused
|
|
||||||
#endif
|
|
||||||
|
|
||||||
// max length for paths
|
|
||||||
#define MAX_PATH_LENGTH 512u
|
|
||||||
|
|
||||||
// copy/assignement from Eigen expression
|
|
||||||
#define EIGEN_EXPR_CTOR(ctorName, Class, Base, ExprType) \
|
|
||||||
template <typename Derived>\
|
|
||||||
ctorName(const ExprType<Derived> &m): Base(m) {}\
|
|
||||||
template<typename Derived>\
|
|
||||||
Class & operator=(const ExprType<Derived> &m)\
|
|
||||||
{\
|
|
||||||
this->Base::operator=(m);\
|
|
||||||
return *this;\
|
|
||||||
}
|
|
||||||
|
|
||||||
BEGIN_LATAN_NAMESPACE
|
BEGIN_LATAN_NAMESPACE
|
||||||
|
|
||||||
// Eigen type aliases //////////////////////////////////////////////////////////
|
|
||||||
const int dynamic = -1;
|
|
||||||
|
|
||||||
// array types
|
|
||||||
template <typename Derived>
|
|
||||||
using ArrayExpr = Eigen::ArrayBase<Derived>;
|
|
||||||
|
|
||||||
template <typename T, int nRow = dynamic, int nCol = dynamic>
|
|
||||||
using Array = Eigen::Array<T, nRow, nCol>;
|
|
||||||
|
|
||||||
// matrix types
|
|
||||||
template <typename Derived>
|
|
||||||
using MatExpr = Eigen::MatrixBase<Derived>;
|
|
||||||
|
|
||||||
template <typename T, int nRow = dynamic, int nCol = dynamic>
|
|
||||||
using MatBase = Eigen::Matrix<T, nRow, nCol>;
|
|
||||||
|
|
||||||
typedef MatBase<double> DMatBase;
|
|
||||||
|
|
||||||
// vector types
|
|
||||||
template <typename T>
|
|
||||||
using Vec = MatBase<T, dynamic, 1>;
|
|
||||||
|
|
||||||
typedef Vec<int> IVec;
|
|
||||||
typedef Vec<long int> LVec;
|
|
||||||
typedef Vec<double> DVec;
|
|
||||||
typedef Vec<std::complex<double>> CVec;
|
|
||||||
|
|
||||||
#define FOR_VEC(vec, i) for (Latan::Index i = 0; i < (vec).size(); ++i)
|
|
||||||
#define FOR_ARRAY(ar, i) FOR_VEC(ar, i)
|
|
||||||
|
|
||||||
// block types
|
|
||||||
template <typename Derived>
|
|
||||||
using Block = Eigen::Block<Derived>;
|
|
||||||
template <typename Derived>
|
|
||||||
using ConstBlock = const Eigen::Block<const Derived>;
|
|
||||||
|
|
||||||
template <typename Derived>
|
|
||||||
using Row = typename Derived::RowXpr;
|
|
||||||
template <typename Derived>
|
|
||||||
using ConstRow = typename Derived::ConstRowXpr;
|
|
||||||
|
|
||||||
template <typename Derived>
|
|
||||||
using Col = typename Derived::ColXpr;
|
|
||||||
template <typename Derived>
|
|
||||||
using ConstCol = typename Derived::ConstColXpr;
|
|
||||||
|
|
||||||
// map type
|
|
||||||
template <typename Derived>
|
|
||||||
using Map = Eigen::Map<Derived>;
|
|
||||||
template <typename Derived>
|
|
||||||
using ConstMap = Eigen::Map<const Derived>;
|
|
||||||
|
|
||||||
// Index type //////////////////////////////////////////////////////////////////
|
|
||||||
typedef MatBase<double>::Index Index;
|
|
||||||
|
|
||||||
// Placeholder type ////////////////////////////////////////////////////////////
|
// Placeholder type ////////////////////////////////////////////////////////////
|
||||||
struct PlaceHolder {};
|
struct PlaceHolder {};
|
||||||
|
|
||||||
extern PlaceHolder _;
|
extern PlaceHolder _;
|
||||||
|
|
||||||
// Type utilities //////////////////////////////////////////////////////////////
|
|
||||||
// pointer type test
|
|
||||||
template <typename Derived, typename Base>
|
|
||||||
inline bool isDerivedFrom(const Base *pt)
|
|
||||||
{
|
|
||||||
return (dynamic_cast<const Derived *>(pt) != nullptr);
|
|
||||||
}
|
|
||||||
|
|
||||||
// static logical or
|
|
||||||
template <bool... b>
|
|
||||||
struct static_or;
|
|
||||||
|
|
||||||
template <bool... tail>
|
|
||||||
struct static_or<true, tail...> : static_or<tail...> {};
|
|
||||||
|
|
||||||
template <bool... tail>
|
|
||||||
struct static_or<false, tail...> : std::false_type {};
|
|
||||||
|
|
||||||
template <>
|
|
||||||
struct static_or<> : std::true_type {};
|
|
||||||
|
|
||||||
// Environment /////////////////////////////////////////////////////////////////
|
// Environment /////////////////////////////////////////////////////////////////
|
||||||
namespace Env
|
namespace Env
|
||||||
{
|
{
|
||||||
@ -156,134 +54,6 @@ namespace Env
|
|||||||
void function(void);
|
void function(void);
|
||||||
}
|
}
|
||||||
|
|
||||||
// String conversions //////////////////////////////////////////////////////////
|
|
||||||
template <typename T>
|
|
||||||
inline T strTo(const std::string &str)
|
|
||||||
{
|
|
||||||
T buf;
|
|
||||||
std::istringstream stream(str);
|
|
||||||
|
|
||||||
stream >> buf;
|
|
||||||
|
|
||||||
return buf;
|
|
||||||
}
|
|
||||||
|
|
||||||
// optimized specializations
|
|
||||||
template <>
|
|
||||||
inline float strTo<float>(const std::string &str)
|
|
||||||
{
|
|
||||||
return strtof(str.c_str(), (char **)NULL);
|
|
||||||
}
|
|
||||||
template <>
|
|
||||||
inline double strTo<double>(const std::string &str)
|
|
||||||
{
|
|
||||||
return strtod(str.c_str(), (char **)NULL);
|
|
||||||
}
|
|
||||||
template <>
|
|
||||||
inline int strTo<int>(const std::string &str)
|
|
||||||
{
|
|
||||||
return (int)(strtol(str.c_str(), (char **)NULL, 10));
|
|
||||||
}
|
|
||||||
template <>
|
|
||||||
inline long strTo<long>(const std::string &str)
|
|
||||||
{
|
|
||||||
return strtol(str.c_str(), (char **)NULL, 10);
|
|
||||||
}
|
|
||||||
template <>
|
|
||||||
inline std::string strTo<std::string>(const std::string &str)
|
|
||||||
{
|
|
||||||
return str;
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T>
|
|
||||||
inline std::string strFrom(const T x)
|
|
||||||
{
|
|
||||||
std::ostringstream stream;
|
|
||||||
|
|
||||||
stream << x;
|
|
||||||
|
|
||||||
return stream.str();
|
|
||||||
}
|
|
||||||
|
|
||||||
// specialization for vectors
|
|
||||||
template<>
|
|
||||||
inline DVec strTo<DVec>(const std::string &str)
|
|
||||||
{
|
|
||||||
DVec res;
|
|
||||||
std::vector<double> vbuf;
|
|
||||||
double buf;
|
|
||||||
std::istringstream stream(str);
|
|
||||||
|
|
||||||
while (!stream.eof())
|
|
||||||
{
|
|
||||||
stream >> buf;
|
|
||||||
vbuf.push_back(buf);
|
|
||||||
}
|
|
||||||
res = Map<DVec>(vbuf.data(), static_cast<Index>(vbuf.size()));
|
|
||||||
|
|
||||||
return res;
|
|
||||||
}
|
|
||||||
|
|
||||||
template<>
|
|
||||||
inline IVec strTo<IVec>(const std::string &str)
|
|
||||||
{
|
|
||||||
IVec res;
|
|
||||||
std::vector<int> vbuf;
|
|
||||||
int buf;
|
|
||||||
std::istringstream stream(str);
|
|
||||||
|
|
||||||
while (!stream.eof())
|
|
||||||
{
|
|
||||||
stream >> buf;
|
|
||||||
vbuf.push_back(buf);
|
|
||||||
}
|
|
||||||
res = Map<IVec>(vbuf.data(), static_cast<Index>(vbuf.size()));
|
|
||||||
|
|
||||||
return res;
|
|
||||||
}
|
|
||||||
|
|
||||||
// Manifest file reader ////////////////////////////////////////////////////////
|
|
||||||
inline std::vector<std::string> readManifest(const std::string manFileName)
|
|
||||||
{
|
|
||||||
std::vector<std::string> list;
|
|
||||||
std::ifstream manFile;
|
|
||||||
char buf[MAX_PATH_LENGTH];
|
|
||||||
|
|
||||||
manFile.open(manFileName);
|
|
||||||
while (!manFile.eof())
|
|
||||||
{
|
|
||||||
manFile.getline(buf, MAX_PATH_LENGTH);
|
|
||||||
if (!std::string(buf).empty())
|
|
||||||
{
|
|
||||||
list.push_back(buf);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
manFile.close();
|
|
||||||
|
|
||||||
return list;
|
|
||||||
}
|
|
||||||
|
|
||||||
// Progress bar class //////////////////////////////////////////////////////////
|
|
||||||
class ProgressBar
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
// constructor
|
|
||||||
template <typename A, typename B>
|
|
||||||
ProgressBar(const A current, const B total, const Index nCol = 60);
|
|
||||||
// IO
|
|
||||||
friend std::ostream & operator<<(std::ostream &out,
|
|
||||||
const ProgressBar &&bar);
|
|
||||||
private:
|
|
||||||
Index current_, total_, nCol_;
|
|
||||||
};
|
|
||||||
|
|
||||||
template <typename A, typename B>
|
|
||||||
ProgressBar::ProgressBar(const A current, const B total, const Index nCol)
|
|
||||||
: current_(static_cast<Index>(current))
|
|
||||||
, total_(static_cast<Index>(total))
|
|
||||||
, nCol_(nCol)
|
|
||||||
{}
|
|
||||||
|
|
||||||
END_LATAN_NAMESPACE
|
END_LATAN_NAMESPACE
|
||||||
|
|
||||||
#include <LatAnalyze/Exceptions.hpp>
|
#include <LatAnalyze/Exceptions.hpp>
|
||||||
|
|||||||
@ -1,29 +1,19 @@
|
|||||||
if CC_GNU
|
COM_CXXFLAGS = -Wall -Wconversion
|
||||||
COM_CFLAGS = -Wall -W -pedantic
|
|
||||||
else
|
|
||||||
if CC_INTEL
|
|
||||||
COM_CFLAGS = -Wall
|
|
||||||
endif
|
|
||||||
endif
|
|
||||||
|
|
||||||
if CXX_GNU
|
if CXX_GNU
|
||||||
COM_CXXFLAGS = -Wall -W -pedantic
|
COM_CXXFLAGS += -W -pedantic
|
||||||
else
|
else
|
||||||
if CXX_INTEL
|
if CXX_INTEL
|
||||||
COM_CXXFLAGS = -Wall
|
COM_CXXFLAGS +=
|
||||||
endif
|
endif
|
||||||
endif
|
endif
|
||||||
|
|
||||||
AM_LFLAGS = -olex.yy.c
|
AM_LFLAGS = -olex.yy.c
|
||||||
AM_YFLAGS = -d
|
AM_YFLAGS = -d
|
||||||
|
|
||||||
include eigen_files.mk
|
|
||||||
nobase_dist_pkginclude_HEADERS = $(eigen_files) XML/tinyxml2.hpp
|
|
||||||
|
|
||||||
BUILT_SOURCES = AsciiParser.hpp MathParser.hpp
|
BUILT_SOURCES = AsciiParser.hpp MathParser.hpp
|
||||||
|
|
||||||
lib_LTLIBRARIES = libLatAnalyze.la
|
lib_LTLIBRARIES = libLatAnalyze.la
|
||||||
|
|
||||||
libLatAnalyze_la_SOURCES = \
|
libLatAnalyze_la_SOURCES = \
|
||||||
AsciiFile.cpp \
|
AsciiFile.cpp \
|
||||||
AsciiParser.ypp \
|
AsciiParser.ypp \
|
||||||
@ -53,10 +43,8 @@ libLatAnalyze_la_SOURCES = \
|
|||||||
RootFinder.cpp \
|
RootFinder.cpp \
|
||||||
Solver.cpp \
|
Solver.cpp \
|
||||||
TabFunction.cpp \
|
TabFunction.cpp \
|
||||||
XmlReader.cpp \
|
|
||||||
XYSampleData.cpp \
|
XYSampleData.cpp \
|
||||||
XYStatData.cpp \
|
XYStatData.cpp \
|
||||||
XML/tinyxml2.cpp \
|
|
||||||
../config.h
|
../config.h
|
||||||
libLatAnalyze_ladir = $(pkgincludedir)
|
libLatAnalyze_ladir = $(pkgincludedir)
|
||||||
libLatAnalyze_la_HEADERS = \
|
libLatAnalyze_la_HEADERS = \
|
||||||
@ -88,15 +76,12 @@ libLatAnalyze_la_HEADERS = \
|
|||||||
TabFunction.hpp \
|
TabFunction.hpp \
|
||||||
Solver.hpp \
|
Solver.hpp \
|
||||||
StatArray.hpp \
|
StatArray.hpp \
|
||||||
XmlReader.hpp \
|
|
||||||
XYSampleData.hpp \
|
XYSampleData.hpp \
|
||||||
XYStatData.hpp
|
XYStatData.hpp
|
||||||
if HAVE_MINUIT
|
if HAVE_MINUIT
|
||||||
libLatAnalyze_la_SOURCES += MinuitMinimizer.cpp
|
libLatAnalyze_la_SOURCES += MinuitMinimizer.cpp
|
||||||
libLatAnalyze_la_HEADERS += MinuitMinimizer.hpp
|
libLatAnalyze_la_HEADERS += MinuitMinimizer.hpp
|
||||||
endif
|
endif
|
||||||
|
|
||||||
libLatAnalyze_la_CFLAGS = $(COM_CFLAGS)
|
|
||||||
libLatAnalyze_la_CXXFLAGS = $(COM_CXXFLAGS)
|
libLatAnalyze_la_CXXFLAGS = $(COM_CXXFLAGS)
|
||||||
|
|
||||||
ACLOCAL_AMFLAGS = -I .buildutils/m4
|
ACLOCAL_AMFLAGS = -I .buildutils/m4
|
||||||
|
|||||||
2194
lib/XML/tinyxml2.cpp
2194
lib/XML/tinyxml2.cpp
File diff suppressed because it is too large
Load Diff
2076
lib/XML/tinyxml2.hpp
2076
lib/XML/tinyxml2.hpp
File diff suppressed because it is too large
Load Diff
@ -89,36 +89,40 @@ void XYStatData::reinitChi2(const bool doReinit)
|
|||||||
reinitChi2_ = doReinit;
|
reinitChi2_ = doReinit;
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::x(const PlaceHolder ph1 __unused,
|
Block<MatBase<double>> XYStatData::x(const PlaceHolder ph1 __unused,
|
||||||
const PlaceHolder ph2 __unused)
|
const PlaceHolder ph2 __unused)
|
||||||
{
|
{
|
||||||
return x_.block(0, 0, getNData(), getXDim());
|
return x_.block(0, 0, getNData(), getXDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::x(const PlaceHolder ph1 __unused,
|
ConstBlock<MatBase<double>> XYStatData::x(const PlaceHolder ph1 __unused,
|
||||||
const PlaceHolder ph2 __unused) const
|
const PlaceHolder ph2 __unused)
|
||||||
|
const
|
||||||
{
|
{
|
||||||
return x_.block(0, 0, getNData(), getXDim());
|
return x_.block(0, 0, getNData(), getXDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::x(const Index i, const PlaceHolder ph2 __unused)
|
Block<MatBase<double>> XYStatData::x(const Index i,
|
||||||
|
const PlaceHolder ph2 __unused)
|
||||||
{
|
{
|
||||||
return x_.block(0, i, getNData(), 1);
|
return x_.block(0, i, getNData(), 1);
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::x(const Index i,
|
ConstBlock<MatBase<double>> XYStatData::x(const Index i,
|
||||||
const PlaceHolder ph2 __unused) const
|
const PlaceHolder ph2 __unused)
|
||||||
|
const
|
||||||
{
|
{
|
||||||
return x_.block(0, i, getNData(), 1);
|
return x_.block(0, i, getNData(), 1);
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::x(const PlaceHolder ph1 __unused, const Index k)
|
Block<MatBase<double>> XYStatData::x(const PlaceHolder ph1 __unused,
|
||||||
|
const Index k)
|
||||||
{
|
{
|
||||||
return x_.block(k, 0, 1, getXDim());
|
return x_.block(k, 0, 1, getXDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::x(const PlaceHolder ph1 __unused,
|
ConstBlock<MatBase<double>> XYStatData::x(const PlaceHolder ph1 __unused,
|
||||||
const Index k) const
|
const Index k) const
|
||||||
{
|
{
|
||||||
return x_.block(k, 0, 1, getXDim());
|
return x_.block(k, 0, 1, getXDim());
|
||||||
}
|
}
|
||||||
@ -133,36 +137,39 @@ const double & XYStatData::x(const Index i, const Index k) const
|
|||||||
return x_(k, i);
|
return x_(k, i);
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::y(const PlaceHolder ph1 __unused,
|
Block<MatBase<double>> XYStatData::y(const PlaceHolder ph1 __unused,
|
||||||
const PlaceHolder ph2 __unused)
|
const PlaceHolder ph2 __unused)
|
||||||
{
|
{
|
||||||
return y_.block(0, 0, getNData(), getYDim());
|
return y_.block(0, 0, getNData(), getYDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::y(const PlaceHolder ph1 __unused,
|
ConstBlock<MatBase<double>> XYStatData::y(const PlaceHolder ph1 __unused,
|
||||||
const PlaceHolder ph2 __unused) const
|
const PlaceHolder ph2 __unused)
|
||||||
|
const
|
||||||
{
|
{
|
||||||
return y_.block(0, 0, getNData(), getYDim());
|
return y_.block(0, 0, getNData(), getYDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::y(const Index j, const PlaceHolder ph2 __unused)
|
Block<MatBase<double>> XYStatData::y(const Index j,
|
||||||
|
const PlaceHolder ph2 __unused)
|
||||||
{
|
{
|
||||||
return y_.block(0, j, getNData(), 1);
|
return y_.block(0, j, getNData(), 1);
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::y(const Index j,
|
ConstBlock<MatBase<double>> XYStatData::y(const Index j,
|
||||||
const PlaceHolder ph2 __unused) const
|
const PlaceHolder ph2 __unused)
|
||||||
|
const
|
||||||
{
|
{
|
||||||
return y_.block(0, j, getNData(), 1);
|
return y_.block(0, j, getNData(), 1);
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::y(const PlaceHolder ph1 __unused, const Index k)
|
Block<MatBase<double>> XYStatData::y(const PlaceHolder ph1 __unused, const Index k)
|
||||||
{
|
{
|
||||||
return y_.block(k, 0, 1, getYDim());
|
return y_.block(k, 0, 1, getYDim());
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::y(const PlaceHolder ph1 __unused,
|
ConstBlock<MatBase<double>> XYStatData::y(const PlaceHolder ph1 __unused,
|
||||||
const Index k) const
|
const Index k) const
|
||||||
{
|
{
|
||||||
return y_.block(k, 0, 1, getYDim());
|
return y_.block(k, 0, 1, getYDim());
|
||||||
}
|
}
|
||||||
@ -179,32 +186,35 @@ const double & XYStatData::y(const Index j, const Index k) const
|
|||||||
|
|
||||||
#define FULL_BLOCK(m) (m).block(0, 0, (m).rows(), (m).cols())
|
#define FULL_BLOCK(m) (m).block(0, 0, (m).rows(), (m).cols())
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::xxVar(const Index i1, const Index i2)
|
Block<MatBase<double>> XYStatData::xxVar(const Index i1, const Index i2)
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[xx](i1, i2));
|
return FULL_BLOCK(var_[xx](i1, i2));
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::xxVar(const Index i1, const Index i2) const
|
ConstBlock<MatBase<double>> XYStatData::xxVar(const Index i1,
|
||||||
|
const Index i2) const
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[xx](i1, i2));
|
return FULL_BLOCK(var_[xx](i1, i2));
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::yyVar(const Index j1, const Index j2)
|
Block<MatBase<double>> XYStatData::yyVar(const Index j1, const Index j2)
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[yy](j1, j2));
|
return FULL_BLOCK(var_[yy](j1, j2));
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::yyVar(const Index j1, const Index j2) const
|
ConstBlock<MatBase<double>> XYStatData::yyVar(const Index j1,
|
||||||
|
const Index j2) const
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[yy](j1, j2));
|
return FULL_BLOCK(var_[yy](j1, j2));
|
||||||
}
|
}
|
||||||
|
|
||||||
Block<DMatBase> XYStatData::yxVar(const Index j, const Index i)
|
Block<MatBase<double>> XYStatData::yxVar(const Index j, const Index i)
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[yx](j, i));
|
return FULL_BLOCK(var_[yx](j, i));
|
||||||
}
|
}
|
||||||
|
|
||||||
ConstBlock<DMatBase> XYStatData::yxVar(const Index j, const Index i) const
|
ConstBlock<MatBase<double>> XYStatData::yxVar(const Index j,
|
||||||
|
const Index i) const
|
||||||
{
|
{
|
||||||
return FULL_BLOCK(var_[yx](j, i));
|
return FULL_BLOCK(var_[yx](j, i));
|
||||||
}
|
}
|
||||||
|
|||||||
@ -76,32 +76,36 @@ public:
|
|||||||
void resize(const Index nData, const Index xDim,
|
void resize(const Index nData, const Index xDim,
|
||||||
const Index yDim);
|
const Index yDim);
|
||||||
void reinitChi2(const bool doReinit = true);
|
void reinitChi2(const bool doReinit = true);
|
||||||
Block<DMatBase> x(const PlaceHolder ph1 = _,
|
Block<MatBase<double>> x(const PlaceHolder ph1 = _,
|
||||||
const PlaceHolder ph2 = _);
|
const PlaceHolder ph2 = _);
|
||||||
ConstBlock<DMatBase> x(const PlaceHolder ph1 = _,
|
ConstBlock<MatBase<double>> x(const PlaceHolder ph1 = _,
|
||||||
const PlaceHolder ph2 = _) const;
|
const PlaceHolder ph2 = _) const;
|
||||||
Block<DMatBase> x(const Index i, const PlaceHolder ph2 = _);
|
Block<MatBase<double>> x(const Index i, const PlaceHolder ph2 = _);
|
||||||
ConstBlock<DMatBase> x(const Index i, const PlaceHolder ph2 = _) const;
|
ConstBlock<MatBase<double>> x(const Index i,
|
||||||
Block<DMatBase> x(const PlaceHolder ph1, const Index k);
|
const PlaceHolder ph2 = _) const;
|
||||||
ConstBlock<DMatBase> x(const PlaceHolder ph1, const Index k) const;
|
Block<MatBase<double>> x(const PlaceHolder ph1, const Index k);
|
||||||
double & x(const Index i, const Index k);
|
ConstBlock<MatBase<double>> x(const PlaceHolder ph1,
|
||||||
const double & x(const Index i, const Index k) const;
|
const Index k) const;
|
||||||
Block<DMatBase> y(const PlaceHolder ph1 = _,
|
double & x(const Index i, const Index k);
|
||||||
const PlaceHolder ph2 = _);
|
const double & x(const Index i, const Index k) const;
|
||||||
ConstBlock<DMatBase> y(const PlaceHolder ph1 = _,
|
Block<MatBase<double>> y(const PlaceHolder ph1 = _,
|
||||||
const PlaceHolder ph2 = _) const;
|
const PlaceHolder ph2 = _);
|
||||||
Block<DMatBase> y(const Index i, const PlaceHolder ph2 = _);
|
ConstBlock<MatBase<double>> y(const PlaceHolder ph1 = _,
|
||||||
ConstBlock<DMatBase> y(const Index i, const PlaceHolder ph2 = _) const;
|
const PlaceHolder ph2 = _) const;
|
||||||
Block<DMatBase> y(const PlaceHolder ph1, const Index k);
|
Block<MatBase<double>> y(const Index i, const PlaceHolder ph2 = _);
|
||||||
ConstBlock<DMatBase> y(const PlaceHolder ph1, const Index k) const;
|
ConstBlock<MatBase<double>> y(const Index i,
|
||||||
double & y(const Index i, const Index k);
|
const PlaceHolder ph2 = _) const;
|
||||||
const double & y(const Index i, const Index k) const;
|
Block<MatBase<double>> y(const PlaceHolder ph1, const Index k);
|
||||||
Block<DMatBase> xxVar(const Index i1, const Index i2);
|
ConstBlock<MatBase<double>> y(const PlaceHolder ph1,
|
||||||
ConstBlock<DMatBase> xxVar(const Index i1, const Index i2) const;
|
const Index k) const;
|
||||||
Block<DMatBase> yyVar(const Index j1, const Index j2);
|
double & y(const Index i, const Index k);
|
||||||
ConstBlock<DMatBase> yyVar(const Index j1, const Index j2) const;
|
const double & y(const Index i, const Index k) const;
|
||||||
Block<DMatBase> yxVar(const Index j, const Index i);
|
Block<MatBase<double>> xxVar(const Index i1, const Index i2);
|
||||||
ConstBlock<DMatBase> yxVar(const Index j, const Index i) const;
|
ConstBlock<MatBase<double>> xxVar(const Index i1, const Index i2) const;
|
||||||
|
Block<MatBase<double>> yyVar(const Index j1, const Index j2);
|
||||||
|
ConstBlock<MatBase<double>> yyVar(const Index j1, const Index j2) const;
|
||||||
|
Block<MatBase<double>> yxVar(const Index j, const Index i);
|
||||||
|
ConstBlock<MatBase<double>> yxVar(const Index j, const Index i) const;
|
||||||
// fit
|
// fit
|
||||||
FitResult fit(Minimizer &minimizer, const DVec &init,
|
FitResult fit(Minimizer &minimizer, const DVec &init,
|
||||||
const std::vector<const DoubleModel *> &modelVector);
|
const std::vector<const DoubleModel *> &modelVector);
|
||||||
|
|||||||
@ -1,69 +0,0 @@
|
|||||||
/*
|
|
||||||
* XmlReader.cpp, part of LatAnalyze 3
|
|
||||||
*
|
|
||||||
* Copyright (C) 2013 - 2014 Antonin Portelli
|
|
||||||
*
|
|
||||||
* LatAnalyze 3 is free software: you can redistribute it and/or modify
|
|
||||||
* it under the terms of the GNU General Public License as published by
|
|
||||||
* the Free Software Foundation, either version 3 of the License, or
|
|
||||||
* (at your option) any later version.
|
|
||||||
*
|
|
||||||
* LatAnalyze 3 is distributed in the hope that it will be useful,
|
|
||||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
||||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
||||||
* GNU General Public License for more details.
|
|
||||||
*
|
|
||||||
* You should have received a copy of the GNU General Public License
|
|
||||||
* along with LatAnalyze 3. If not, see <http://www.gnu.org/licenses/>.
|
|
||||||
*/
|
|
||||||
|
|
||||||
#include <LatAnalyze/XmlReader.hpp>
|
|
||||||
#include <LatAnalyze/includes.hpp>
|
|
||||||
|
|
||||||
using namespace std;
|
|
||||||
using namespace Latan;
|
|
||||||
|
|
||||||
/******************************************************************************
|
|
||||||
* XmlReader implementation *
|
|
||||||
******************************************************************************/
|
|
||||||
// constructor /////////////////////////////////////////////////////////////////
|
|
||||||
XmlReader::XmlReader(const string &fileName)
|
|
||||||
{
|
|
||||||
open(fileName);
|
|
||||||
}
|
|
||||||
|
|
||||||
// IO //////////////////////////////////////////////////////////////////////////
|
|
||||||
void XmlReader::open(const std::string &fileName)
|
|
||||||
{
|
|
||||||
name_ = fileName;
|
|
||||||
doc_.LoadFile(name_.c_str());
|
|
||||||
if (doc_.Error())
|
|
||||||
{
|
|
||||||
string errMsg1, errMsg2;
|
|
||||||
|
|
||||||
if (doc_.GetErrorStr1())
|
|
||||||
{
|
|
||||||
errMsg1 = doc_.GetErrorStr1();
|
|
||||||
}
|
|
||||||
if (doc_.GetErrorStr2())
|
|
||||||
{
|
|
||||||
errMsg2 = doc_.GetErrorStr2();
|
|
||||||
}
|
|
||||||
LATAN_ERROR(Io, "tinyxml2 code " + strFrom(doc_.ErrorID()) + ": " +
|
|
||||||
errMsg1 + " - " + errMsg2);
|
|
||||||
}
|
|
||||||
root_ = doc_.RootElement();
|
|
||||||
}
|
|
||||||
|
|
||||||
// XML structure access ////////////////////////////////////////////////////////
|
|
||||||
const XmlNode * XmlReader::getNextNode(const XmlNode *node)
|
|
||||||
{
|
|
||||||
if (node)
|
|
||||||
{
|
|
||||||
return node->NextSiblingElement();
|
|
||||||
}
|
|
||||||
else
|
|
||||||
{
|
|
||||||
return nullptr;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
@ -1,181 +0,0 @@
|
|||||||
/*
|
|
||||||
* XmlReader.hpp, part of LatAnalyze 3
|
|
||||||
*
|
|
||||||
* Copyright (C) 2013 - 2014 Antonin Portelli
|
|
||||||
*
|
|
||||||
* LatAnalyze 3 is free software: you can redistribute it and/or modify
|
|
||||||
* it under the terms of the GNU General Public License as published by
|
|
||||||
* the Free Software Foundation, either version 3 of the License, or
|
|
||||||
* (at your option) any later version.
|
|
||||||
*
|
|
||||||
* LatAnalyze 3 is distributed in the hope that it will be useful,
|
|
||||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
||||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
||||||
* GNU General Public License for more details.
|
|
||||||
*
|
|
||||||
* You should have received a copy of the GNU General Public License
|
|
||||||
* along with LatAnalyze 3. If not, see <http://www.gnu.org/licenses/>.
|
|
||||||
*/
|
|
||||||
|
|
||||||
#ifndef Latan_XmlReader_hpp_
|
|
||||||
#define Latan_XmlReader_hpp_
|
|
||||||
|
|
||||||
#include <LatAnalyze/Global.hpp>
|
|
||||||
#include <LatAnalyze/XML/tinyxml2.hpp>
|
|
||||||
#include <iostream>
|
|
||||||
#include <vector>
|
|
||||||
|
|
||||||
BEGIN_LATAN_NAMESPACE
|
|
||||||
|
|
||||||
/******************************************************************************
|
|
||||||
* XML parameter file reader *
|
|
||||||
******************************************************************************/
|
|
||||||
typedef tinyxml2::XMLElement XmlNode;
|
|
||||||
|
|
||||||
class XmlReader
|
|
||||||
{
|
|
||||||
public:
|
|
||||||
// constructor
|
|
||||||
XmlReader(void) = default;
|
|
||||||
explicit XmlReader(const std::string &fileName);
|
|
||||||
// destructor
|
|
||||||
virtual ~XmlReader(void) = default;
|
|
||||||
// IO
|
|
||||||
void open(const std::string &fileName);
|
|
||||||
// XML structure access
|
|
||||||
template <typename... Strs>
|
|
||||||
static const XmlNode * getFirstNode(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName,
|
|
||||||
Strs... nodeNames);
|
|
||||||
template <typename... Strs>
|
|
||||||
const XmlNode * getFirstNode(const std::string &nodeName,
|
|
||||||
Strs... nodeNames) const;
|
|
||||||
static const XmlNode * getNextNode(const XmlNode *node);
|
|
||||||
template <typename T>
|
|
||||||
static T getValue(const XmlNode *node);
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
static T getFirstValue(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName, Strs... nodeNames);
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
T getFirstValue(const std::string &nodeName, Strs... nodeNames) const;
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
static std::vector<T> getAllValues(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName,
|
|
||||||
Strs... nodeNames);
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
std::vector<T> getAllValues(const std::string &nodeName,
|
|
||||||
Strs... nodeNames) const;
|
|
||||||
private:
|
|
||||||
|
|
||||||
private:
|
|
||||||
std::string name_;
|
|
||||||
tinyxml2::XMLDocument doc_;
|
|
||||||
XmlNode *root_{nullptr};
|
|
||||||
};
|
|
||||||
|
|
||||||
/******************************************************************************
|
|
||||||
* XmlReader template implementation *
|
|
||||||
******************************************************************************/
|
|
||||||
// XML structure access ////////////////////////////////////////////////////////
|
|
||||||
template <typename... Strs>
|
|
||||||
const XmlNode * XmlReader::getFirstNode(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName,
|
|
||||||
Strs... nodeNames)
|
|
||||||
{
|
|
||||||
static_assert(static_or<std::is_assignable<std::string, Strs>::value...>::value,
|
|
||||||
"getFirstValue arguments are not compatible with std::string");
|
|
||||||
|
|
||||||
const unsigned int nName = sizeof...(nodeNames) + 1;
|
|
||||||
const std::string name[] = {nodeName, nodeNames...};
|
|
||||||
const XmlNode *node = startNode;
|
|
||||||
|
|
||||||
if (!node)
|
|
||||||
{
|
|
||||||
LATAN_ERROR(Io, "root node is null, no XML file opened");
|
|
||||||
}
|
|
||||||
for (unsigned int i = 0; i < nName; ++i)
|
|
||||||
{
|
|
||||||
node = node->FirstChildElement(name[i].c_str());
|
|
||||||
if (!node)
|
|
||||||
{
|
|
||||||
LATAN_ERROR(Parsing, "XML node " + name[i] + " not found");
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
return node;
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename... Strs>
|
|
||||||
const XmlNode * XmlReader::getFirstNode(const std::string &nodeName,
|
|
||||||
Strs... nodeNames) const
|
|
||||||
{
|
|
||||||
if (!root_)
|
|
||||||
{
|
|
||||||
LATAN_ERROR(Io, "root node is null, no XML file opened");
|
|
||||||
}
|
|
||||||
|
|
||||||
return getFirstNode(root_, nodeName, nodeNames...);
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T>
|
|
||||||
T XmlReader::getValue(const XmlNode *node)
|
|
||||||
{
|
|
||||||
if (node)
|
|
||||||
{
|
|
||||||
if (node->GetText())
|
|
||||||
{
|
|
||||||
return strTo<T>(node->GetText());
|
|
||||||
}
|
|
||||||
else
|
|
||||||
{
|
|
||||||
return T();
|
|
||||||
}
|
|
||||||
}
|
|
||||||
else
|
|
||||||
{
|
|
||||||
return T();
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
T XmlReader::getFirstValue(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName, Strs... nodeNames)
|
|
||||||
{
|
|
||||||
const XmlNode *node = getFirstNode(startNode, nodeName, nodeNames...);
|
|
||||||
|
|
||||||
return getValue<T>(node);
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
T XmlReader::getFirstValue(const std::string &nodeName, Strs... nodeNames) const
|
|
||||||
{
|
|
||||||
return getFirstValue<T>(root_, nodeName, nodeNames...);
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
std::vector<T> XmlReader::getAllValues(const XmlNode *startNode,
|
|
||||||
const std::string &nodeName,
|
|
||||||
Strs... nodeNames)
|
|
||||||
{
|
|
||||||
const XmlNode *node = getFirstNode(startNode, nodeName, nodeNames...);
|
|
||||||
std::vector<T> value;
|
|
||||||
|
|
||||||
while (node)
|
|
||||||
{
|
|
||||||
value.push_back(getValue<T>(node));
|
|
||||||
node = getNextNode(node);
|
|
||||||
}
|
|
||||||
|
|
||||||
return value;
|
|
||||||
}
|
|
||||||
|
|
||||||
template <typename T, typename... Strs>
|
|
||||||
std::vector<T> XmlReader::getAllValues(const std::string &nodeName,
|
|
||||||
Strs... nodeNames) const
|
|
||||||
{
|
|
||||||
return getAllValues<T>(root_, nodeName, nodeNames...);
|
|
||||||
}
|
|
||||||
|
|
||||||
END_LATAN_NAMESPACE
|
|
||||||
|
|
||||||
#endif // Latan_XmlReader_hpp_
|
|
||||||
@ -1,18 +0,0 @@
|
|||||||
#!/usr/bin/env bash
|
|
||||||
|
|
||||||
if (( $# != 1 )); then
|
|
||||||
echo "usage: `basename $0` <archive>" 1>&2
|
|
||||||
fi
|
|
||||||
ARC=$1
|
|
||||||
|
|
||||||
INITDIR=`pwd`
|
|
||||||
rm -rf latan/Eigen
|
|
||||||
ARCDIR=`tar -tf ${ARC} | head -n1 | sed -e 's@/.*@@'`
|
|
||||||
tar -xf ${ARC}
|
|
||||||
cd ${ARCDIR}
|
|
||||||
tar -cf - Eigen --exclude='*.txt' | tar -xf - -C ../latan/
|
|
||||||
cd ../latan
|
|
||||||
echo 'eigen_files =\' > eigen_files.mk
|
|
||||||
find Eigen -type f -print | sed 's/^/ /;$q;s/$/ \\/' >> eigen_files.mk
|
|
||||||
cd ${INITDIR}
|
|
||||||
rm -rf ${ARCDIR}
|
|
||||||
Loading…
x
Reference in New Issue
Block a user