|
|
cdf516b5ac
|
CI with Travis and loads of portability fixes
|
2016-04-11 18:57:59 +01:00 |
|
|
|
d1666a1e75
|
compiler compatibility fixes (clang, GCC 5, Intel 2016)
|
2016-04-07 20:10:47 +01:00 |
|
|
|
19de6290d1
|
giving up on having no implicit sign conversion, it is too cumbersome with Eigen using signed indices
|
2016-04-07 14:52:33 +01:00 |
|
|
|
08418fbc24
|
minor code cleaning
|
2016-04-07 14:51:50 +01:00 |
|
|
|
5d4d518e04
|
include cleaning and copyright update
|
2016-04-06 20:11:23 +01:00 |
|
|
|
3611d12fa9
|
internal random generator entirely removed, use C++11 generators
|
2016-04-06 20:04:23 +01:00 |
|
|
|
ebc676e577
|
Merge branch 'master' into new_fit
# Conflicts:
# lib/Plot.hpp
|
2016-04-06 18:40:14 +01:00 |
|
|
|
11d9aa4747
|
matrix heatmap plot range fix
|
2016-04-06 18:38:37 +01:00 |
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ed8398145a
|
fit: lookup table optimisation after profiling
|
2016-04-06 18:34:33 +01:00 |
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69ac2d5c82
|
FitInterface: test functions for correlations
|
2016-04-06 18:32:11 +01:00 |
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c52c80ceae
|
Merge branch 'master' into new_fit
|
2016-04-05 20:56:30 +01:00 |
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ed4dd14504
|
function to convert a variance matrix into a correlation matrix
|
2016-04-05 20:56:21 +01:00 |
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27bc092f55
|
fit: various fixes
|
2016-04-05 20:55:11 +01:00 |
|
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681d6589e2
|
Merge branch 'master' into new_fit
|
2016-04-05 15:57:32 +01:00 |
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257c430745
|
I/O for DSample type
|
2016-04-05 15:57:19 +01:00 |
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3d86708e6f
|
XY*Data: helper methods for unidimensional data
|
2016-04-05 14:29:57 +01:00 |
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|
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2fca987e8f
|
FitInterface: control of SVD tolerance
|
2016-04-05 14:29:34 +01:00 |
|
|
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939520db24
|
fit: coordinate buffering forced to be const
|
2016-04-05 14:29:12 +01:00 |
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|
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f83ee5bf6c
|
matrix heatmap plot
|
2016-04-05 12:51:00 +01:00 |
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41ea5c984e
|
FitInterface: methods to set global correlations
|
2016-04-05 12:50:02 +01:00 |
|
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d0ef32fb9e
|
NloptMinimizer: more precise output
|
2016-04-05 11:50:45 +01:00 |
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|
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07bacf0e4b
|
new fit: partial residuals and plots
|
2016-04-04 19:09:18 +01:00 |
|
|
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f82b20dc73
|
code cleaning + derivative support for NLopt
|
2016-04-04 14:56:21 +01:00 |
|
|
|
2de5a9440b
|
interface to NLopt minimisers (tested and working)
|
2016-04-01 21:40:22 +01:00 |
|
|
|
ca73ef1269
|
minimiser interface improvement
|
2016-04-01 21:39:49 +01:00 |
|
|
|
c294553991
|
XY data: user can pass a sequence of minimisers to perform a fit
|
2016-04-01 21:38:49 +01:00 |
|
|
|
b3c2b17eef
|
support for variable naming for function, model and data
|
2016-03-31 12:12:30 +01:00 |
|
|
|
d699e9e564
|
code cleaning
|
2016-03-23 17:16:50 +00:00 |
|
|
|
9b9c86cf72
|
simplification of the Minuit minimiser interface, (successful) test of the new fit interface
|
2016-03-23 17:08:25 +00:00 |
|
|
|
ee8ed05b81
|
various critical fixes and improvements to the new fit interface
|
2016-03-23 17:07:31 +00:00 |
|
|
|
3793aca27c
|
lot of fixes, XYSampleData fit now seems to work (more checks are probably needed)
|
2016-03-16 20:03:32 +00:00 |
|
|
|
1f2150a42a
|
first implementation of the new XYSampleData (to be tested)
|
2016-03-16 18:33:51 +00:00 |
|
|
|
1e874ebb04
|
method to copy FitInterface
|
2016-03-16 18:33:30 +00:00 |
|
|
|
313a730bb2
|
minor code cleaning
|
2016-03-16 18:33:06 +00:00 |
|
|
|
2eb70aa975
|
Minuit simplex minimiser is very inefficient, replaced it by Migrad for pre-minization
|
2016-03-16 13:07:01 +00:00 |
|
|
|
9bc9288dfb
|
XYStatData: various fixes and improvement, fit is now working
|
2016-03-16 13:05:56 +00:00 |
|
|
|
9f67ead605
|
XYStatData (new): fit implemented (TO BE TESTED)
|
2016-03-15 19:13:20 +00:00 |
|
|
|
b165a98a93
|
FitInterface data layout complete, first version of the new XYStatData
|
2016-03-15 16:38:57 +00:00 |
|
|
|
a4b1584645
|
FitInterface (new): covariance matrix interface & layout
|
2016-03-10 18:43:53 +00:00 |
|
|
|
624fb36957
|
FitInterface (new): total x dimension fit size fixed
|
2016-03-10 15:34:38 +00:00 |
|
|
|
325a6d3db1
|
Merge branch 'master' into new_fit
|
2016-03-10 15:11:48 +00:00 |
|
|
|
7f8eacc95d
|
more includes cleaning
|
2016-03-10 15:11:36 +00:00 |
|
|
|
c535d261ea
|
FitInterface (new): first (tested) version of data layout
|
2016-03-10 15:10:23 +00:00 |
|
|
|
9730dafe62
|
Merge branch 'master' into new_fit
|
2016-03-08 19:39:16 +00:00 |
|
|
|
c6a8a1571b
|
minor code cleaning
|
2016-03-08 19:39:05 +00:00 |
|
|
|
917031747f
|
first commit for the new fit interface
|
2016-03-08 19:37:51 +00:00 |
|
|
|
352caf30b6
|
more deactivation of the old fit interface
|
2016-03-08 19:37:02 +00:00 |
|
|
|
016a29e3df
|
removing old fit module
|
2016-03-08 16:23:18 +00:00 |
|
|
|
a435caeecb
|
fits: covariance matrix is inverted using pseudoinverse, the interface allows to se the SVD tolerance
|
2016-02-29 19:50:28 +00:00 |
|
|
|
6657cba5c8
|
Plot: minor fix in temporary file management
|
2015-12-09 18:12:39 +00:00 |
|
|
|
ff968efd94
|
slight optimisation of the quadratic interpolation
|
2015-12-02 18:10:10 +00:00 |
|
|
|
e950e18639
|
method to get fit p-value from fit interface
|
2015-11-25 18:29:31 +00:00 |
|
|
|
9be76b11d7
|
Histogram: percentiles & confidence interval
|
2015-11-24 16:27:47 +00:00 |
|
|
|
3f28430e4a
|
Merge pull request #3 from mspraggs/master
TabFunction: Added optional interpolation type argument
|
2015-11-19 14:16:37 +00:00 |
|
|
|
a4999a53fd
|
IO: code improvement
|
2015-11-18 19:46:52 +00:00 |
|
|
|
4f2e87cf4f
|
Hdf5File: random generator state I/O fix
|
2015-11-18 19:46:08 +00:00 |
|
Matt Spraggs
|
dccdefa238
|
Merge branch 'master' of github.com:aportelli/LatAnalyze3
|
2015-11-13 16:25:57 +00:00 |
|
|
|
abd8bfc91c
|
Minimizer: limit initialisation fix
|
2015-11-13 16:25:16 +00:00 |
|
Matt Spraggs
|
aa1ae67b60
|
Merge branch 'master' of github.com:aportelli/LatAnalyze3
|
2015-11-13 14:31:21 +00:00 |
|
|
|
aeda59adfa
|
dimension resized automatically for solvers
|
2015-11-13 14:30:10 +00:00 |
|
Matt Spraggs
|
9427e8dd16
|
TabFunction: Fixed bug in quadratic interpolation
|
2015-11-12 13:14:44 +00:00 |
|
Matt Spraggs
|
512494aed9
|
TabFunction: Added comment for quadratic interpolation.
|
2015-11-10 12:27:48 +00:00 |
|
Matt Spraggs
|
bb044da413
|
TabFunction: removed trailing semicolon
|
2015-11-10 12:24:47 +00:00 |
|
Matt Spraggs
|
64372eb9dc
|
TabFunction: Implemented quadratic interpolation
|
2015-11-10 12:23:29 +00:00 |
|
Matt Spraggs
|
ff49304137
|
Updated nearest interpolation to use equal_range function.
|
2015-11-09 23:04:09 +00:00 |
|
Matt Spraggs
|
de7bdc68a4
|
TabFunction: Added optional interpolation type argument
|
2015-11-09 00:26:10 +00:00 |
|
|
|
ae62a3225d
|
IO: polymorphic file opening
|
2015-11-04 17:30:52 +00:00 |
|
|
|
1b0bdf074a
|
HDF5: compatibility fix for pre-C++11 ABI
|
2015-11-03 15:57:01 +00:00 |
|
|
|
f251769a1c
|
Math: chi^2 p-value function from GSL
|
2015-11-02 16:17:59 +00:00 |
|
|
|
7561d419a3
|
license text update
|
2015-10-07 19:03:41 +01:00 |
|
|
|
f9fcf25012
|
IO: stricter control of data names
|
2015-10-07 19:03:19 +01:00 |
|
Matt Spraggs
|
134f8245ff
|
Hdf5File: Added some code to sanitize group names
Currently you can pass in relative paths with slashes in, and this
upsets HDF5's createGroup function.
|
2015-10-01 22:39:22 +01:00 |
|
Matt Spraggs
|
9c52fa104b
|
Hdf5File.cpp: fixed bug in determination of first group name
|
2015-10-01 21:38:17 +01:00 |
|
|
|
5e3247697d
|
first implementation of HDF5 format
|
2015-10-01 00:13:34 +01:00 |
|
|
|
c672c33189
|
histogram class and associated plotting functions
|
2015-09-28 18:18:54 +01:00 |
|
|
|
918e1c7ce8
|
MathInterpreter: include pi as a constant, fix in function call
|
2015-09-28 18:18:13 +01:00 |
|
|
|
ccce7b11c0
|
Plot: use of new mkdir function from LatCore
|
2015-09-28 16:32:37 +01:00 |
|
|
|
2b0d75c012
|
ASCII data: lexer compatibility fix
|
2015-09-08 11:34:40 +01:00 |
|
|
|
af3023038b
|
Minuit minimiser: interface to choose algorithm
|
2015-08-07 16:10:03 +02:00 |
|
|
|
6202ed4518
|
Plot: more ways to plot data
|
2015-07-07 18:50:36 +01:00 |
|
|
|
cebf2334fa
|
XY datatypes: tools to get residuals or partial residuals from a fit
|
2015-07-07 18:50:03 +01:00 |
|
|
|
59bb3fb78c
|
Functions: more binding utilities
|
2015-07-07 18:49:22 +01:00 |
|
|
|
57d4bfb4f8
|
Fit: various fixes in indexing for error-on-variable chi^2
|
2015-06-26 20:34:48 +01:00 |
|
|
|
1f21f7fb81
|
Plot: head command object
|
2015-06-26 20:33:57 +01:00 |
|
|
|
897dae5b2f
|
compatibility fix: __unused changed to __dumb
|
2015-06-15 15:20:29 +02:00 |
|
|
|
cb45b34ddc
|
code cleaning and GCC compatibility
|
2015-06-15 14:59:10 +02:00 |
|
|
|
3e6b0edce1
|
copyright update
|
2015-06-11 14:04:54 +01:00 |
|
|
|
bd770cebb5
|
code cleaning
|
2015-06-11 14:03:41 +01:00 |
|
|
|
389a52374c
|
portability fixes
|
2015-05-23 14:44:43 +01:00 |
|
|
|
7f2c8b6742
|
Plot: now handling gunplot through a forked process to allow interactivity (default terminal is now 'qt')
|
2015-05-13 17:38:47 +01:00 |
|
|
|
a9bb53bc1b
|
StatArray: correlation matrix calculation
|
2015-05-13 17:35:10 +01:00 |
|
|
|
b7a5dd51de
|
Mat: header name fix
|
2015-03-20 16:18:23 +00:00 |
|
|
|
f2a47c3697
|
File: default mode switched to write
|
2015-03-20 16:05:59 +00:00 |
|
|
|
b90d410e6b
|
StatArray: ambiguity removed in mean function
|
2015-03-20 16:05:11 +00:00 |
|
|
|
d93f75dac6
|
DoubleFunction: memory fixes
|
2015-02-26 18:50:56 +00:00 |
|
|
|
465499626b
|
overhaul of the function class
|
2015-02-24 17:00:19 +00:00 |
|
|
|
b061e9093f
|
less warnings in third-party code
|
2015-02-24 16:59:22 +00:00 |
|
|
|
232c9b7948
|
LatCore compatibility
|
2015-02-24 16:57:15 +00:00 |
|
|
|
cbb67c992f
|
Dataset: integral conversion fixes
|
2015-02-13 15:26:23 +00:00 |
|
|
|
60a010b592
|
Plot: horizontal lines and axis labels
|
2015-02-13 15:26:00 +00:00 |
|
|
|
80ec189b91
|
MinuitMinimizer: various fixes related to limits
|
2015-01-28 17:22:12 +00:00 |
|
|
|
da8f394398
|
Function: function call fix
|
2015-01-28 17:21:07 +00:00 |
|
|
|
c1b8597ecc
|
AsciiFile: double precision writing
|
2015-01-28 17:20:51 +00:00 |
|
|
|
9c6dedd3d6
|
Model: binding functions
|
2015-01-28 17:19:57 +00:00 |
|
|
|
c0d717bcb6
|
Derivative: function is now just a pointer
|
2015-01-28 17:19:33 +00:00 |
|
|
|
ee8be4f004
|
FitInterface: unnecessary resizing in copy function
|
2015-01-28 17:17:28 +00:00 |
|
|
|
dd43786189
|
fix in discrete random generator return type
|
2015-01-28 17:16:05 +00:00 |
|
|
|
0e1ef33954
|
integral factorial function
|
2015-01-28 17:15:26 +00:00 |
|
|
|
3f812ee514
|
namespace macro refactoring to avoid conflicts
|
2015-01-28 17:15:05 +00:00 |
|
|
|
583fd05edf
|
missing file in Makefile.am
|
2015-01-28 17:09:22 +00:00 |
|
|
|
8b1cd8f43a
|
allow '/' in data name
|
2014-10-21 17:36:46 +01:00 |
|
|
|
89cf008fb8
|
minor fixes
|
2014-10-14 16:36:20 +01:00 |
|
|
|
9e6bbd95c3
|
Minimizer: limits interface
|
2014-10-14 16:34:27 +01:00 |
|
|
|
bf3fe8bd13
|
Compiled function: access to source code
|
2014-09-29 15:10:38 +01:00 |
|
|
|
bbeaec9ed3
|
Math interpreter: significant improvement of runtime context handling
|
2014-09-26 18:41:30 +01:00 |
|
|
|
0fdd76b19d
|
numerical derivative class with arbitrary improvement order and step auto-tuning
|
2014-09-26 18:40:52 +01:00 |
|
|
|
4d19c23400
|
first root finder class implementation
|
2014-09-22 15:19:30 +01:00 |
|
|
|
8188a5541f
|
missing headers
|
2014-09-18 17:19:07 +01:00 |
|
|
|
36ef20c929
|
improvement of Minuit minimizer
|
2014-09-18 17:18:51 +01:00 |
|
|
|
d70d84862d
|
class for linearly interpolated functions
|
2014-09-18 17:18:15 +01:00 |
|
|
|
c70008b895
|
DoubleFunctionSample: constructor inheritance removed
|
2014-09-18 17:16:49 +01:00 |
|
|
|
c0bfb12bd7
|
XY*Data: dog is now a double
|
2014-09-18 17:15:56 +01:00 |
|
|
|
05f5223d31
|
MatSample: scalar operators fix
|
2014-09-18 17:15:27 +01:00 |
|
|
|
674263dde7
|
Plot: function to save plots
|
2014-09-18 17:13:26 +01:00 |
|
|
|
b17e2c0c3c
|
function to read file lists and progress bar class
|
2014-06-04 14:43:36 +02:00 |
|
|
|
c9a008aaf7
|
minor code cleaning
|
2014-06-03 13:40:19 +02:00 |
|
|
|
41aac911ac
|
DoubleFunction: arithmetic operators
|
2014-06-03 13:32:29 +02:00 |
|
|
|
a29a4bde21
|
Plot: caption modifier
|
2014-06-02 17:04:20 +02:00 |
|
|
|
78372fb18a
|
Plot: band plot and terminal option
|
2014-04-18 11:29:17 +01:00 |
|
|
|
dfe6240c14
|
DoubleFunctionSample: more call operators
|
2014-04-18 11:28:51 +01:00 |
|
|
|
62d395e8e2
|
Plot: code cleaning
|
2014-04-17 12:19:13 +01:00 |
|
|
|
98567eb4d6
|
FitInterface: more convenient function to assume correlated data
|
2014-04-17 12:18:49 +01:00 |
|
|
|
39012e4b73
|
GSL integrator added - LatAnalyze now depends on GSL
|
2014-04-17 12:18:11 +01:00 |
|
|
|
2af61252b6
|
Math: integer power function
|
2014-04-15 17:35:01 +01:00 |
|
|
|
086c49237d
|
alias for complex number samples
|
2014-04-15 17:29:54 +01:00 |
|
|
|
f9ffc17a5f
|
SampleFitResult: constructor inheritance removed
|
2014-04-15 17:29:36 +01:00 |
|
|
|
47e159e041
|
significant optimisation of the math interpreter using integer address tables for variables and functions
|
2014-04-08 19:48:52 +01:00 |
|
|
|
b0f6c30445
|
XmlReader: interface for direct access to XML nodes
|
2014-04-08 19:48:03 +01:00 |
|
|
|
9b6ad8d56c
|
StatArray: safer statistical functions
|
2014-04-08 19:47:09 +01:00 |
|
|
|
38da863801
|
more strTo specialisations
|
2014-04-08 19:46:37 +01:00 |
|
|
|
a6b96b34bb
|
more templatisation/cleaning of data types
|
2014-04-07 19:29:47 +01:00 |
|
|
|
f79533c5ce
|
rewriting of matrix sample class as a pure template with scalar operations
|
2014-04-07 18:08:52 +01:00 |
|
|
|
10ca7d1d29
|
more matrix type aliases
|
2014-04-07 15:56:39 +01:00 |
|
|
|
749818d9cc
|
Function classes: default function replaced by nullptr
|
2014-04-07 15:56:08 +01:00 |
|
|
|
dc659991d0
|
XmlReader: additional reading functions
|
2014-04-07 15:55:31 +01:00 |
|
|
|
5787cf0544
|
Minuit message for invalid minimisation
|
2014-04-03 10:04:59 +02:00 |
|
|
|
0ae8adc013
|
XmlReader: more safety
|
2014-04-03 10:04:34 +02:00 |
|
|
|
9a415017c8
|
XY*Data: variadic functions for fit
|
2014-04-03 10:03:46 +02:00 |
|
|
|
166ed550ae
|
pi constant
|
2014-04-03 10:02:28 +02:00 |
|
|
|
1d9769adbc
|
global functions to read vectors
|
2014-04-03 10:02:06 +02:00 |
|
