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67c4119859
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Merge branch 'hotfix/3.1.1' into develop
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2016-04-19 19:26:49 -07:00 |
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9edec3709b
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consistent boolean notation
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2016-04-19 19:21:05 -07:00 |
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60170db570
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fix in fit dimension name indexing
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2016-04-19 19:15:42 -07:00 |
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1f7dba7779
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Minuit precsion fix
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2016-04-15 18:23:45 +01:00 |
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0bd347d010
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more robust type cast in I/O functions
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2016-04-15 18:23:17 +01:00 |
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1a6b877f4e
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more precise output for fit results
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2016-04-15 18:21:40 +01:00 |
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2d20fadb4e
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Merge branch 'release/3.1' of github.com:aportelli/LatAnalyze into release/3.1
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2016-04-13 12:31:26 +01:00 |
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9c9353a790
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build system fix
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2016-04-12 21:47:56 +01:00 |
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7d8c04535f
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code cleaning
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2016-04-12 21:06:06 +01:00 |
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a216834e14
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configure summary
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2016-04-12 20:55:02 +01:00 |
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bd9e0262ca
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now HDF5, Minuit and NLopt are really optional dependencies
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2016-04-12 20:31:53 +01:00 |
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9bf538dfca
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interface to GSL minimisers
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2016-04-12 20:10:37 +01:00 |
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cdf516b5ac
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CI with Travis and loads of portability fixes
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2016-04-11 18:57:59 +01:00 |
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d1666a1e75
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compiler compatibility fixes (clang, GCC 5, Intel 2016)
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2016-04-07 20:10:47 +01:00 |
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19de6290d1
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giving up on having no implicit sign conversion, it is too cumbersome with Eigen using signed indices
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2016-04-07 14:52:33 +01:00 |
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08418fbc24
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minor code cleaning
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2016-04-07 14:51:50 +01:00 |
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5d4d518e04
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include cleaning and copyright update
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2016-04-06 20:11:23 +01:00 |
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3611d12fa9
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internal random generator entirely removed, use C++11 generators
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2016-04-06 20:04:23 +01:00 |
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ebc676e577
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Merge branch 'master' into new_fit
# Conflicts:
# lib/Plot.hpp
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2016-04-06 18:40:14 +01:00 |
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11d9aa4747
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matrix heatmap plot range fix
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2016-04-06 18:38:37 +01:00 |
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ed8398145a
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fit: lookup table optimisation after profiling
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2016-04-06 18:34:33 +01:00 |
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69ac2d5c82
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FitInterface: test functions for correlations
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2016-04-06 18:32:11 +01:00 |
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c52c80ceae
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Merge branch 'master' into new_fit
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2016-04-05 20:56:30 +01:00 |
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ed4dd14504
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function to convert a variance matrix into a correlation matrix
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2016-04-05 20:56:21 +01:00 |
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27bc092f55
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fit: various fixes
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2016-04-05 20:55:11 +01:00 |
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681d6589e2
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Merge branch 'master' into new_fit
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2016-04-05 15:57:32 +01:00 |
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257c430745
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I/O for DSample type
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2016-04-05 15:57:19 +01:00 |
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3d86708e6f
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XY*Data: helper methods for unidimensional data
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2016-04-05 14:29:57 +01:00 |
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2fca987e8f
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FitInterface: control of SVD tolerance
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2016-04-05 14:29:34 +01:00 |
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939520db24
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fit: coordinate buffering forced to be const
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2016-04-05 14:29:12 +01:00 |
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f83ee5bf6c
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matrix heatmap plot
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2016-04-05 12:51:00 +01:00 |
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41ea5c984e
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FitInterface: methods to set global correlations
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2016-04-05 12:50:02 +01:00 |
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d0ef32fb9e
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NloptMinimizer: more precise output
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2016-04-05 11:50:45 +01:00 |
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07bacf0e4b
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new fit: partial residuals and plots
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2016-04-04 19:09:18 +01:00 |
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f82b20dc73
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code cleaning + derivative support for NLopt
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2016-04-04 14:56:21 +01:00 |
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2de5a9440b
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interface to NLopt minimisers (tested and working)
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2016-04-01 21:40:22 +01:00 |
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ca73ef1269
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minimiser interface improvement
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2016-04-01 21:39:49 +01:00 |
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c294553991
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XY data: user can pass a sequence of minimisers to perform a fit
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2016-04-01 21:38:49 +01:00 |
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b3c2b17eef
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support for variable naming for function, model and data
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2016-03-31 12:12:30 +01:00 |
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d699e9e564
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code cleaning
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2016-03-23 17:16:50 +00:00 |
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9b9c86cf72
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simplification of the Minuit minimiser interface, (successful) test of the new fit interface
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2016-03-23 17:08:25 +00:00 |
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ee8ed05b81
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various critical fixes and improvements to the new fit interface
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2016-03-23 17:07:31 +00:00 |
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3793aca27c
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lot of fixes, XYSampleData fit now seems to work (more checks are probably needed)
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2016-03-16 20:03:32 +00:00 |
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1f2150a42a
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first implementation of the new XYSampleData (to be tested)
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2016-03-16 18:33:51 +00:00 |
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1e874ebb04
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method to copy FitInterface
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2016-03-16 18:33:30 +00:00 |
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313a730bb2
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minor code cleaning
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2016-03-16 18:33:06 +00:00 |
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2eb70aa975
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Minuit simplex minimiser is very inefficient, replaced it by Migrad for pre-minization
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2016-03-16 13:07:01 +00:00 |
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9bc9288dfb
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XYStatData: various fixes and improvement, fit is now working
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2016-03-16 13:05:56 +00:00 |
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9f67ead605
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XYStatData (new): fit implemented (TO BE TESTED)
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2016-03-15 19:13:20 +00:00 |
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b165a98a93
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FitInterface data layout complete, first version of the new XYStatData
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2016-03-15 16:38:57 +00:00 |
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a4b1584645
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FitInterface (new): covariance matrix interface & layout
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2016-03-10 18:43:53 +00:00 |
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624fb36957
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FitInterface (new): total x dimension fit size fixed
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2016-03-10 15:34:38 +00:00 |
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325a6d3db1
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Merge branch 'master' into new_fit
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2016-03-10 15:11:48 +00:00 |
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7f8eacc95d
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more includes cleaning
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2016-03-10 15:11:36 +00:00 |
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c535d261ea
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FitInterface (new): first (tested) version of data layout
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2016-03-10 15:10:23 +00:00 |
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9730dafe62
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Merge branch 'master' into new_fit
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2016-03-08 19:39:16 +00:00 |
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c6a8a1571b
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minor code cleaning
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2016-03-08 19:39:05 +00:00 |
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917031747f
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first commit for the new fit interface
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2016-03-08 19:37:51 +00:00 |
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352caf30b6
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more deactivation of the old fit interface
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2016-03-08 19:37:02 +00:00 |
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016a29e3df
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removing old fit module
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2016-03-08 16:23:18 +00:00 |
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a435caeecb
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fits: covariance matrix is inverted using pseudoinverse, the interface allows to se the SVD tolerance
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2016-02-29 19:50:28 +00:00 |
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6657cba5c8
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Plot: minor fix in temporary file management
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2015-12-09 18:12:39 +00:00 |
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ff968efd94
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slight optimisation of the quadratic interpolation
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2015-12-02 18:10:10 +00:00 |
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e950e18639
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method to get fit p-value from fit interface
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2015-11-25 18:29:31 +00:00 |
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9be76b11d7
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Histogram: percentiles & confidence interval
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2015-11-24 16:27:47 +00:00 |
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3f28430e4a
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Merge pull request #3 from mspraggs/master
TabFunction: Added optional interpolation type argument
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2015-11-19 14:16:37 +00:00 |
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a4999a53fd
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IO: code improvement
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2015-11-18 19:46:52 +00:00 |
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4f2e87cf4f
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Hdf5File: random generator state I/O fix
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2015-11-18 19:46:08 +00:00 |
|
Matt Spraggs
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dccdefa238
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Merge branch 'master' of github.com:aportelli/LatAnalyze3
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2015-11-13 16:25:57 +00:00 |
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abd8bfc91c
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Minimizer: limit initialisation fix
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2015-11-13 16:25:16 +00:00 |
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Matt Spraggs
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aa1ae67b60
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Merge branch 'master' of github.com:aportelli/LatAnalyze3
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2015-11-13 14:31:21 +00:00 |
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aeda59adfa
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dimension resized automatically for solvers
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2015-11-13 14:30:10 +00:00 |
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Matt Spraggs
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9427e8dd16
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TabFunction: Fixed bug in quadratic interpolation
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2015-11-12 13:14:44 +00:00 |
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Matt Spraggs
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512494aed9
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TabFunction: Added comment for quadratic interpolation.
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2015-11-10 12:27:48 +00:00 |
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Matt Spraggs
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bb044da413
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TabFunction: removed trailing semicolon
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2015-11-10 12:24:47 +00:00 |
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Matt Spraggs
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64372eb9dc
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TabFunction: Implemented quadratic interpolation
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2015-11-10 12:23:29 +00:00 |
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Matt Spraggs
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ff49304137
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Updated nearest interpolation to use equal_range function.
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2015-11-09 23:04:09 +00:00 |
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Matt Spraggs
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de7bdc68a4
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TabFunction: Added optional interpolation type argument
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2015-11-09 00:26:10 +00:00 |
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ae62a3225d
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IO: polymorphic file opening
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2015-11-04 17:30:52 +00:00 |
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1b0bdf074a
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HDF5: compatibility fix for pre-C++11 ABI
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2015-11-03 15:57:01 +00:00 |
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f251769a1c
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Math: chi^2 p-value function from GSL
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2015-11-02 16:17:59 +00:00 |
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7561d419a3
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license text update
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2015-10-07 19:03:41 +01:00 |
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f9fcf25012
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IO: stricter control of data names
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2015-10-07 19:03:19 +01:00 |
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Matt Spraggs
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134f8245ff
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Hdf5File: Added some code to sanitize group names
Currently you can pass in relative paths with slashes in, and this
upsets HDF5's createGroup function.
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2015-10-01 22:39:22 +01:00 |
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Matt Spraggs
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9c52fa104b
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Hdf5File.cpp: fixed bug in determination of first group name
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2015-10-01 21:38:17 +01:00 |
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5e3247697d
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first implementation of HDF5 format
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2015-10-01 00:13:34 +01:00 |
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c672c33189
|
histogram class and associated plotting functions
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2015-09-28 18:18:54 +01:00 |
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918e1c7ce8
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MathInterpreter: include pi as a constant, fix in function call
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2015-09-28 18:18:13 +01:00 |
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ccce7b11c0
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Plot: use of new mkdir function from LatCore
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2015-09-28 16:32:37 +01:00 |
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2b0d75c012
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ASCII data: lexer compatibility fix
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2015-09-08 11:34:40 +01:00 |
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af3023038b
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Minuit minimiser: interface to choose algorithm
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2015-08-07 16:10:03 +02:00 |
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6202ed4518
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Plot: more ways to plot data
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2015-07-07 18:50:36 +01:00 |
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cebf2334fa
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XY datatypes: tools to get residuals or partial residuals from a fit
|
2015-07-07 18:50:03 +01:00 |
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59bb3fb78c
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Functions: more binding utilities
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2015-07-07 18:49:22 +01:00 |
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57d4bfb4f8
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Fit: various fixes in indexing for error-on-variable chi^2
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2015-06-26 20:34:48 +01:00 |
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1f21f7fb81
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Plot: head command object
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2015-06-26 20:33:57 +01:00 |
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897dae5b2f
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compatibility fix: __unused changed to __dumb
|
2015-06-15 15:20:29 +02:00 |
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cb45b34ddc
|
code cleaning and GCC compatibility
|
2015-06-15 14:59:10 +02:00 |
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3e6b0edce1
|
copyright update
|
2015-06-11 14:04:54 +01:00 |
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bd770cebb5
|
code cleaning
|
2015-06-11 14:03:41 +01:00 |
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