/* * XYStatData.hpp, part of LatAnalyze 3 * * Copyright (C) 2013 - 2016 Antonin Portelli * * LatAnalyze 3 is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * LatAnalyze 3 is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with LatAnalyze 3. If not, see . */ #ifndef Latan_XYStatData_hpp_ #define Latan_XYStatData_hpp_ #include #include #include #include BEGIN_LATAN_NAMESPACE /****************************************************************************** * object for fit result * ******************************************************************************/ class FitResult: public DVec { friend class XYStatData; friend class XYSampleData; friend class SampleFitResult; public: // constructors FitResult(void) = default; EIGEN_EXPR_CTOR(FitResult, FitResult, Base, MatExpr) // destructor virtual ~FitResult(void) = default; // access double getChi2(void) const; double getChi2PerDof(void) const; double getNDof(void) const; Index getNPar(void) const; double getPValue(void) const; const DoubleFunction & getModel(const Index j = 0) const; // IO void print(const bool printXsi = false, std::ostream &out = std::cout) const; private: double chi2_{0.}; Index nDof_{0}, nPar_{0}; std::vector model_; std::vector parName_; }; /****************************************************************************** * class for X vs. Y statistical data * ******************************************************************************/ class XYStatData: public FitInterface { public: // constructor XYStatData(void) = default; // destructor virtual ~XYStatData(void) = default; // data access double & x(const Index r, const Index i); const double & x(const Index r, const Index i) const; const DVec & x(const Index k) const; double & y(const Index k, const Index j); const double & y(const Index k, const Index j) const; void setXXVar(const Index i1, const Index i2, const DMat &m); void setYYVar(const Index j1, const Index j2, const DMat &m); void setXYVar(const Index i, const Index j, const DMat &m); void setXError(const Index i, const DVec &err); void setYError(const Index j, const DVec &err); template void setUnidimData(const DMat &xData, const Ts & ...yDatas); const DMat & getXXVar(const Index i1, const Index i2) const; const DMat & getYYVar(const Index j1, const Index j2) const; const DMat & getXYVar(const Index i, const Index j) const; DVec getXError(const Index i) const; DVec getYError(const Index j) const; DMat getTable(const Index i, const Index j) const; // get total fit variance matrix and its pseudo-inverse const DMat & getFitVarMat(void); const DMat & getFitVarMatPInv(void); // fit FitResult fit(std::vector &minimizer, const DVec &init, const std::vector &v); FitResult fit(Minimizer &minimizer, const DVec &init, const std::vector &v); template FitResult fit(std::vector &minimizer, const DVec &init, const DoubleModel &model, const Ts... models); template FitResult fit(Minimizer &minimizer, const DVec &init, const DoubleModel &model, const Ts... models); // residuals XYStatData getResiduals(const FitResult &fit); XYStatData getPartialResiduals(const FitResult &fit, const DVec &ref, const Index i); protected: // create data virtual void createXData(const std::string name, const Index nData); virtual void createYData(const std::string name); void resizeVarMat(void); private: // schedule buffer computation void scheduleXMapInit(void); void scheduleChi2DataVecInit(void); // buffer total fit variance matrix void updateFitVarMat(void); // buffer list of x vectors void updateXMap(void) const; // buffer chi^2 vectors void updateChi2DataVec(void); void updateChi2ModVec(const DVec p, const std::vector &v, const Index nPar, const Index nXDim); private: std::vector> yData_; // no map here for fit performance std::vector xData_; std::vector xMap_; Mat xxVar_, yyVar_, xyVar_; DMat fitVar_, fitVarInv_; DVec chi2DataVec_, chi2ModVec_, chi2Vec_; DVec xBuf_; bool initXMap_{true}; bool initChi2DataVec_{true}; }; /****************************************************************************** * XYStatData template implementation * ******************************************************************************/ template void XYStatData::setUnidimData(const DMat &xData, const Ts & ...yDatas) { static_assert(static_or::value...>::value, "y data arguments are not compatible with DMat"); std::vector yData{&yDatas...}; FOR_VEC(xData, r) { x(r, 0) = xData(r); for (unsigned int j = 0; j < yData.size(); ++j) { y(r, j) = (*(yData[j]))(r); } } } template FitResult XYStatData::fit(std::vector &minimizer, const DVec &init, const DoubleModel &model, const Ts... models) { static_assert(static_or::value...>::value, "model arguments are not compatible with DoubleModel"); std::vector modelVector{&model, &models...}; return fit(minimizer, init, modelVector); } template FitResult XYStatData::fit(Minimizer &minimizer, const DVec &init, const DoubleModel &model, const Ts... models) { static_assert(static_or::value...>::value, "model arguments are not compatible with DoubleModel"); std::vector mv{&minimizer}; return fit(mv, init, model, models...); } /****************************************************************************** * error check macros * ******************************************************************************/ #define checkVarMat(m, var)\ if (((m).rows() != (var).rows()) or ((m).cols() != (var).cols()))\ {\ LATAN_ERROR(Size, "provided variance matrix has a wrong size"\ " (expected " + strFrom((var).rows()) + "x"\ + strFrom((var).cols()) + ", got " + strFrom((m).rows())\ + "x" + strFrom((m).cols()) + ")");\ } #define checkErrVec(err, var)\ if ((err).size() != (var).rows())\ {\ LATAN_ERROR(Size, "provided error vector has a wrong size"\ " (expected " + strFrom((var).rows()) + ", got "\ + strFrom((err).size()) + ")");\ } #define checkModelVec(v)\ if (static_cast((v).size()) != getNYDim())\ {\ LATAN_ERROR(Size, "provided model vector has a wrong size"\ " (expected " + strFrom(getNYDim()) + ", got "\ + strFrom((v).size()) + ")");\ }\ for (unsigned int _i = 1; _i < (v).size(); ++_i)\ {\ if ((v)[_i]->getNArg() != getNXDim())\ {\ LATAN_ERROR(Size, "model " + strFrom(_i) + " has a wrong"\ + " number of argument (expected " + strFrom(getNXDim())\ + ", got " + strFrom((v)[_i]->getNArg()));\ }\ }\ {\ Index _nPar = (v)[0]->getNPar();\ for (unsigned int _i = 1; _i < (v).size(); ++_i)\ {\ if ((v)[_i]->getNPar() != _nPar)\ {\ LATAN_ERROR(Size, "model " + strFrom(_i) + " has a wrong"\ + " number of parameter (expected " + strFrom(_nPar)\ + ", got " + strFrom((v)[_i]->getNPar()));\ }\ }\ } END_LATAN_NAMESPACE #endif // Latan_XYStatData_hpp_