/* * StatArray.hpp, part of LatAnalyze 3 * * Copyright (C) 2013 - 2014 Antonin Portelli * * LatAnalyze 3 is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * LatAnalyze 3 is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with LatAnalyze 3. If not, see . */ #ifndef Latan_StatArray_hpp_ #define Latan_StatArray_hpp_ #include #include #include BEGIN_NAMESPACE /****************************************************************************** * Array class with statistics * ******************************************************************************/ template class StatArray: public Array { private: typedef Array Base; public: // constructors StatArray(void); StatArray(const Index size); EIGEN_EXPR_CTOR(StatArray, unique_arg(StatArray), Base, ArrayBase) // destructor virtual ~StatArray(void) = default; // access Index size(void) const; // operators T & operator[](const Index s); const T & operator[](const Index s) const; // statistics void bin(Index binSize); T mean(const Index pos, const Index n) const; T mean(void) const; T variance(const Index pos, const Index n) const; T variance(void) const; }; // reduction operations namespace ReducOp { template inline T square(const T &a); template inline T sum(const T &a, const T &b); template <> inline DMat square(const DMat &a); } /****************************************************************************** * StatArray class template implementation * ******************************************************************************/ // constructors //////////////////////////////////////////////////////////////// template StatArray::StatArray(void) : Base(static_cast(offset)) {} template StatArray::StatArray(const Index size) : Base(static_cast(size + offset)) {} // access ////////////////////////////////////////////////////////////////////// template Index StatArray::size(void) const { return Base::size() - offset; } // operators /////////////////////////////////////////////////////////////////// template T & StatArray::operator[](const Index s) { return Base::operator[](s + offset); } template const T & StatArray::operator[](const Index s) const { return Base::operator[](s + offset); } // statistics ////////////////////////////////////////////////////////////////// template void StatArray::bin(Index binSize) { Index q = size()/binSize, r = size()%binSize; for (Index i = 0; i < q; ++i) { (*this)[i] = mean(i*binSize, binSize); } if (r != 0) { (*this)[q] = mean(q*binSize, r); this->conservativeResize(offset + q + 1); } else { this->conservativeResize(offset + q); } } template T StatArray::mean(const Index pos, const Index n) const { T result; if (n) { result = this->segment(pos+offset, n).redux(&ReducOp::sum); } return result/static_cast(n); } template T StatArray::mean(void) const { return mean(0, size()); } template T StatArray::variance(const Index pos, const Index n) const { T s, sqs, result; if (n) { s = this->segment(pos+offset, n).redux(&ReducOp::sum); sqs = this->segment(pos+offset, n).unaryExpr(&ReducOp::square) .redux(&ReducOp::sum); result = sqs - ReducOp::square(s)/static_cast(n); } return result/static_cast(n - 1); } template T StatArray::variance(void) const { return variance(0, size()); } // reduction operations //////////////////////////////////////////////////////// template inline T ReducOp::sum(const T &a, const T &b) { return a + b; } template inline T ReducOp::square(const T &a) { return a*a; } template <> inline DMat ReducOp::square(const DMat &a) { return a.cwiseProduct(a); } END_NAMESPACE #endif // Latan_StatArray_hpp_