Test script for Frontier on I/O

2026-08-11 21:33:30 +01:00 · 2026-08-11 13:37:50 -04:00
parent d68b111d06
commit 1f55c13bc4
1 changed files with 104 additions and 0 deletions
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+#!/bin/bash -l
+
+# Node count scan.  Everything that could confound the comparison is held
+# fixed and only the number of Lustre clients changes:
+#
+#   local volume   8.8.32.128        = 262144 sites x 576 B = 151 MB / rank
+#   aggregation    k=2, row of 16, 8 extents of 18 MB        (identical at
+#                                                             every node count)
+#   old path       contiguous run = lLattice[0]*576 = 4.6 KB (identical too)
+#
+# So the ratio of contiguous extent between the two layout preserving paths is
+# a constant 4000x across the whole scan, and any change in their relative
+# bandwidth is a property of the client count alone.  That is the variable the
+# 4 node runs could not move.
+#
+# Trim the tail of the run list if you want a smaller allocation; the
+# geometries are independent.
+
+#SBATCH --job-name=ioScale
+#SBATCH --nodes=128
+#SBATCH --ntasks-per-node=8
+#SBATCH --cpus-per-task=7
+#SBATCH --gpus-per-node=8
+#SBATCH --time=02:00:00
+#SBATCH --account=phy157_dwf
+#SBATCH --gpu-bind=none
+#SBATCH --exclusive
+#SBATCH --mem=0
+
+cat << EOF > select_gpu
+#!/bin/bash
+export GPU_MAP=(0 1 2 3 7 6 5 4)
+export NUMA_MAP=(3 3 1 1 2 2 0 0)
+export GPU=\${GPU_MAP[\$SLURM_LOCALID]}
+export NUMA=\${NUMA_MAP[\$SLURM_LOCALID]}
+unset ROCR_VISIBLE_DEVICES
+export HIP_VISIBLE_DEVICES=\$GPU
+
+rank=\$SLURM_PROCID
+CMD="numactl -m \$NUMA -N \$NUMA  \$*"
+exec \$CMD
+EOF
+
+chmod +x ./select_gpu
+SELECT=$SLURM_SUBMIT_DIR/select_gpu
+
+root=$HOME/ParallelIO/systems/Frontier/
+source ${root}/sourceme-rocm7.2.sh
+
+export OMP_NUM_THREADS=7
+export MPICH_GPU_SUPPORT_ENABLED=1
+
+WORK=/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/aggscale.$SLURM_JOB_ID
+mkdir -p $WORK
+cd       $WORK
+
+# The largest rung writes three files of 154 GB, so budget ~700 GB for the
+# whole scan and check the quota before submitting.
+#
+# Do NOT stripe by default.  Measured on Frontier at 128 nodes / 1024 ranks,
+# 154.6 GB record, best of 3 (MB/s):
+#
+#                     default layout    lfs setstripe -c -1 -S 8M
+#   raw                    97673                81728
+#   MPI-IO lexicographic   31675                77534
+#   aggregate             189535                86063
+#
+# The two layout preserving paths want opposite things.  Wide striping is what
+# rescues MPI-IO at scale, 32 -> 78 GB/s, which is presumably what careful
+# striping has been buying in production.  It costs the aggregate path a factor
+# of 2.2, and costs raw as well.  With the default layout MPI-IO plateaus at
+# ~30 GB/s from 64 nodes upward -- the 20-40 GB/s seen in production -- while
+# the aggregate path keeps scaling.  Uncomment only to reproduce that.
+#lfs setstripe -c -1 -S 8M $WORK
+lfs getstripe -d $WORK      # record the inherited layout; needed to read the numbers
+
+BIN=$SLURM_SUBMIT_DIR/tests/IO/Test_aggregate_io
+ARGS="--aggregate-target 4194304 --io-no-correctness --io-reps 3"
+
+run () {   # run <nodes> <grid> <mpi> <comment>
+  local nodes=$1 nranks=$(( $1 * 8 ))
+  echo
+  echo "==================================================================="
+  echo "=== SCAN nodes=$nodes ranks=$nranks  grid=$2  mpi=$3   $4"
+  echo "==================================================================="
+  srun -N$nodes -n$nranks --ntasks-per-node=8 $SELECT $BIN --grid $2 --mpi $3 \
+       --accelerator-threads 8 --shm 2048 --device-mem 32000 $ARGS
+  echo "=== exit $?"
+}
+
+#            nodes  global lattice      decomposition   record
+run    4     32.32.64.128    4.4.2.1   "4.8 GB"
+run    8     32.32.64.256    4.4.2.2   "9.7 GB"
+run   16     32.32.64.512    4.4.2.4   "19.3 GB"
+run   32     32.32.128.512   4.4.4.4   "38.6 GB"
+run   64     32.32.128.1024  4.4.4.8   "77.3 GB"
+run  128     32.32.256.1024  4.4.8.8   "154.6 GB"
+
+echo
+echo "=== done.  Files left in $WORK"
+echo "=== For cold read numbers, submit a SECOND job on a fresh allocation"
+echo "=== with WORK pointed at this directory and --io-read-only added to"
+echo "=== ARGS.  Reading back what this job wrote only measures page cache."
+ls -l $WORK