Update to TODO list

TODO

@@ -1,5 +1,5 @@
 * - BinaryWriter, TextWriter etc...
-  - protocol buffers? replace xml
+  - protocol buffers? replace xmlReader/Writer ec..
 
 * Stencil operator support                           -----Initial thoughts, trial implementation DONE.
                                                      -----some simple tests that Stencil matches Cshift.
@@ -10,15 +10,14 @@
 
 * CovariantShift support                             -----Use a class to store gauge field? (parallel transport?)
 
+
 * Consider switch std::vector to boost arrays or something lighter weight
   boost::multi_array<type, 3> A()...    to replace multi1d, multi2d etc..
 
-* TensorRemove is a hack, come up with a long term rationalised approach to Complex vs. Scalar<Scalar<Scalar<Complex > > >
-  QDP forces use of "toDouble" to get back to non tensor scalar. This role is presently taken TensorRemove, but I
-  want to introduce a syntax that does not require this.
 
 * norm2l is a hack. figure out syntax error and make this norm2. c.f. tests/Grid_gamma.cc
 
+
 *  std::vector replacement;
 
   Had to change "reserve" back to "resize" on std::vector in Lattice class.
@@ -32,30 +31,47 @@
   resize. Find out if valarray or alternative works differently prior to 
   doing this since there may still be something I can use..
 
-* Flavour matrices?
 
 * Make the Tensor types and Complex etc... play more nicely.
+* TensorRemove is a hack, come up with a long term rationalised approach to Complex vs. Scalar<Scalar<Scalar<Complex > > >
+  QDP forces use of "toDouble" to get back to non tensor scalar. This role is presently taken TensorRemove, but I
+  want to introduce a syntax that does not require this.
 
-* Pauli, SU subgroup, etc.. 
-
-* Fourspin, two spin project
-
-* su3 exponentiation & log etc.. [Jamie's code?]
-  TaProj
-
-* Parallel MPI2 IO
-
-* rb4d support.
-
-* Check for missing functionality                    - partially audited against QDP++ layout
 
 * Optimise the extract/merge SIMD routines; Azusa??
  - I have collated into single location at least.
  - Need to use _mm_*insert/extract routines.
 
+
 * Conformable test in Cshift routines.
 
 
+* Flavour matrices?
+* Pauli, SU subgroup, etc.. 
+* su3 exponentiation & log etc.. [Jamie's code?]
+* TaProj
+
+
+* Fourspin, two spin project --- DONE
+
+
+* Parallel MPI2 IO
+
+* rb4d support for 5th dimension in Mobius.
+
+
+* Check for missing functionality                    - partially audited against QDP++ layout
+
+Algorithms
+* LinearOperator
+* LinearSolver
+* Polynomial 
+* Eigen
+* Pcg
+* fPcg
+* MCR
+* etc..
+
 AUDITS:
 
 * FIXME audit
@@ -68,25 +84,20 @@ AUDITS:
    // TODO
    //
    // Base class to share common code between vRealF, VComplexF etc...
-  //
+   //
    // Unary functions
    // cos,sin, tan, acos, asin, cosh, acosh, tanh, sinh, // Scalar<vReal> only arg
    // exp, log, sqrt, fabs
    //
-  // transposeColor, transposeSpin,
+   // transposeColor, transposeSpin,
    // adjColor, adjSpin,
    //
-  // copyMask.
+   // copyMask.
    //
    // localMaxAbs
    //
    // Fourier transform equivalent.
 
-* LinearOperator
-
-  LinearSolver
-
-  Polynomial etc...
 
 ======================================================================================================
 
@@ -102,6 +113,8 @@ FUNCTIONALITY:
                                                      ----- Implement mapping between traceColour and traceSpin and traceIndex<1/2>.
 * How to do U[mu] ... lorentz part of type structure or not. more like chroma if not. -- DONE
 
+* Twospin/Fourspin/Gamma/Proj/Recon                  ----- DONE
+
 * subdirs lib, tests ??                              ----- DONE
   - lib/math        
   - lib/cartesian
@@ -133,6 +146,5 @@ FUNCTIONALITY:
 * I/O support
 * NERSC Lattice loading, plaquette test             ------- DONE single node 
 
-
 * Controling std::cout                              ------- DONE