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155 Commits

Author SHA1 Message Date
Guido Cossu
e863a948e3 Cleaning up files and directories 2017-01-26 15:24:49 +00:00
Guido Cossu
7996f06335 Commented out registrations. 
Move to an independent file that is linked only for the factory managed HMC
 2017-01-25 18:27:45 +00:00
Guido Cossu
7b40a3e3e5 Reorganizing files 2017-01-25 18:09:46 +00:00
Guido Cossu
0baa20d292 Againg fixing compilation on Travis, no LIME lib present 2017-01-25 11:18:44 +00:00
Guido Cossu
4571c918a4 Fixing compilation error when compiling without LIME 2017-01-25 11:14:43 +00:00
Guido Cossu
5251ea4d30 Adding more fermion action modules, generalised DWF 2017-01-25 11:10:44 +00:00
Guido Cossu
244f8fb6dc Added JSON parser (without NextElement) 2017-01-23 14:57:38 +00:00
Guido Cossu
27dfe816fa Added TwoFlavorsEO 
Had to remove a conformability check in the Derivative of SchurDiff,
see the comments in the file
 2017-01-20 16:59:31 +00:00
Guido Cossu
f96fac0aee All functionalities ready. 
Todo: add all the fermion action modules
 2017-01-20 12:56:20 +00:00
Guido Cossu
851f2ad8ef Adding fermions actions support in the factories 2017-01-19 10:00:02 +00:00
Guido Cossu
23e0561dd6 Added all required functionalities, time for cleaning 
All actions to be added
 2017-01-18 16:31:51 +00:00
Guido Cossu
924130833e Moved more parameters to serialization 2017-01-17 13:22:18 +00:00
Guido Cossu
0157274762 HMC factories 2017-01-17 10:46:49 +00:00
Guido Cossu
87e8aad5a0 Added support for input file HMC modules (missing the actions yet) 2017-01-16 16:07:12 +00:00
Guido Cossu
c6f59c2933 Adding factories 2017-01-16 10:18:09 +00:00
Guido Cossu
0dfda4bb90 Working on the RNGModule 2017-01-09 11:06:18 +00:00
Guido Cossu
1189ebc8b5 Cleaning up the checkpointers interface 2017-01-05 15:52:52 +00:00
Guido Cossu
1bb8578173 Added module for checkpointers 2017-01-05 13:09:32 +00:00
Guido Cossu
5214846341 Adding a resource manager 2016-12-22 12:41:56 +00:00
Guido Cossu
ce1a115e0b Removing redundant arguments for integrator functions, step 1 2016-12-20 17:51:30 +00:00
Guido Cossu
143c70e29f Debugged the threaded version. Cleaning up 2016-12-07 04:40:25 +00:00
Guido Cossu
b812d5e39c Added single threaded version of the derivative for the Ls vectorised DWF 2016-12-06 16:31:13 +00:00
Guido Cossu
3834feb4b7 Adding action names 2016-11-16 16:46:49 +00:00
Guido Cossu
a783282b8b Merge branch 'develop' into feature/hmc_generalise 2016-11-10 18:13:07 +00:00
paboyle
33dc1f51b5 Final sign off commits from Cori-1 2016-11-09 04:11:03 -08:00
Guido Cossu
d50055cd96 Making the ILDG support optional 2016-10-26 09:48:01 +01:00
Guido Cossu
47c7159177 ILDG reader/writer works 
Fill the xml header with the required information, todo.
 2016-10-24 21:57:54 +01:00
Guido Cossu
f55c16f984 Adding a barrier in the RNG save 2016-10-24 11:02:14 +01:00
Guido Cossu
392130a537 Working on the 5d 2016-10-21 14:22:25 +01:00
Guido Cossu
74f1ed3bc5 Adding some documentation for HMC 2016-10-19 10:51:13 +01:00
Guido Cossu
e250e6b7bb Moving parameters outside of the HMCrunner 2016-10-14 17:22:32 +01:00
Guido Cossu
eda4dd622e Some more edit 2016-10-11 15:45:20 +01:00
Guido Cossu
c68a2b9637 Minor fix 2016-10-10 11:54:58 +01:00
Guido Cossu
293df6cd20 Generalising the HMCRunner and moving parameters to the user level 2016-10-10 11:49:55 +01:00
Guido Cossu
26b9740d53 Some fix for the GenericHMCrunner 2016-10-10 09:43:05 +01:00
Guido Cossu
6eb873dd96 Added scalar action phi^4 
Check Norm2 output (Complex type assumption)
 2016-10-07 17:28:46 +01:00
Guido Cossu
11b4c80b27 Added support for hmc and binary IO for a general field 2016-10-07 13:37:29 +01:00
Guido Cossu
c065e454c3 Adding Binrary IO, untested 2016-10-06 10:12:11 +01:00
Guido Cossu
d9b5fbd374 In the middle of adding a general binary writer 2016-10-04 11:24:08 +01:00
Guido Cossu
cfbc1a26b8 Now the gauge implementation has to take care of the Nexp 2016-10-03 16:20:06 +01:00
Guido Cossu
257f69f931 One more function to generalise the HMC integrator 2016-10-03 15:50:04 +01:00
Guido Cossu
e415260961 First cut on generalised HMC 
Backward compatibility OK
 2016-10-03 15:28:00 +01:00
Guido Cossu
c4ac6e7e8f Consolidating HMC interface 
Uniformed interface for standard action in fundamental rep and Hirep
 2016-09-23 10:47:42 +01:00
Guido Cossu
b512ccbee6 HMC for Adjoint fermions works 
Accepts and reproduces known results

Check initial instability of inverters
when starting from hot configurations
 2016-08-30 11:31:25 +01:00
Guido Cossu
147e2025b9 Added unit tests on the representation transformations 
Status: Passing all tests
 2016-08-08 16:54:22 +01:00
Guido Cossu
49b5c49851 Checked the hermiticity of the op in derivative, ok 
Still CG fails to converge
 2016-07-31 12:37:33 +01:00
Guido Cossu
089f0ab582 Debugged HMC for Creutz relation 2016-07-28 16:44:41 +01:00
Guido Cossu
b93e18ed50 Modified the Dirac Kernel class to compile with different number of colours 
Added the general push_back functionality to accomodate for all defined representations

Compiles, not tested
 2016-07-18 16:36:28 +01:00
Guido Cossu
9c77bb69a5 Added all elements for Hirep HMC 
TODO: Test and debug
 2016-07-18 12:05:23 +01:00
Guido Cossu
7edf4c6c04 Added HMC utitities for the higher representations 
TODO: Inherit types for the pseudofermions, Debugging, testing
 2016-07-15 13:39:47 +01:00
Guido Cossu
9dc345e8e8 Debugged smearing and adding HMC functions for hirep 2016-07-13 17:51:18 +01:00
Guido Cossu
a9ae30f868 Added representations definitions for the HMC 2016-07-12 13:36:10 +01:00
Guido Cossu
5028969d4b Added generators for the adjoint representation 2016-07-08 15:40:11 +01:00
Guido Cossu
3e80947c2b Cleaned up HMC output. Tested smeared HMCs for single precision (OK) 2016-07-05 12:03:54 +01:00
Guido Cossu
fdfbf11c6d Merge branch 'develop' into temporary-smearing 2016-07-04 18:45:10 +01:00
Guido Cossu
9cb90f714e Merge remote-tracking branch 'origin/develop' into temporary-smearing 2016-07-04 17:28:40 +01:00
Guido Cossu
0fa66e8f3c Debugged smearing for EOWilson, accepts 2016-07-04 15:35:37 +01:00
Guido Cossu
092fa0d8da Debugged set_fj, 
to be fixed: BUG in imag()
 2016-07-01 16:06:20 +01:00
Guido Cossu
565e9329ba Changed the colouring classes 2016-06-30 16:51:03 +01:00
Guido Cossu
5e02392f9c Fixed compilation error for benchmark_dwf 
Some parts were assuming floating point precision
 2016-06-20 12:30:51 +01:00
neo
339be37dba Debugging smeared HMC 2016-04-13 17:00:14 +09:00
neo
a87b744621 HMC runs but does not accept with smearing on 2016-04-07 16:45:11 +09:00
Guido Cossu
97d0d56bcb Debugging Smearing routines (set_fj) 2016-04-06 17:58:43 +09:00
Guido Cossu
4b1cf580e0 Debugging the Smearing routines 2016-04-05 16:19:30 +09:00
paboyle
090e7aa930 Merge remote-tracking branch 'origin/chulwoo-dec12-2015' 
Merge Chulwoo's Lanczos related improvements.
Merge Nd!=4 fixes for pure gauge HMC from Evan.
 2016-03-08 09:55:14 +00:00
Peter Boyle
40f2db9bc0 Disable metropolis step until 10 traj covered. Should move to exposing these 
in XML input and start having "applications" directory.
 2016-02-21 08:01:44 -06:00
neo
771235017d Adding smearing routines (development) 2016-02-19 15:30:41 +09:00
Jung
5c57d4f403 Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2 
Conflicts:
	lib/qcd/action/fermion/WilsonKernels.h
 2016-01-11 11:36:45 -05:00
Jung
5924e5a562 Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2 
Conflicts:
	configure
	lib/qcd/action/Actions.h
	lib/qcd/action/fermion/WilsonKernels.h
 2016-01-06 03:44:57 -05:00
paboyle
aae8bf31a7 Global edit adding copyright and license info to every source file. 2016-01-02 14:51:32 +00:00
paboyle
5a80930dd2 Charge conjugation boundary conditions for gauge fields implemented as a policy 
class, changing the nature of covariant Cshifts used in
plaquettes, rectangles and staples.

As a result same code is used for the plaq and rect action independent of the BC type.

Should probably isolate the BC in a separate class that Gimpl takes as a template param.
Do the same with smearing policies.

This would then allow composition of BC with smearing etc....
 2016-01-02 13:37:25 +00:00
Azusa Yamaguchi
e6cad3821c Logging improvement 2015-12-29 19:51:18 +00:00
Azusa Yamaguchi
78c4e862ef Plaq, Rectangle, Iwasaki, Symanzik and DBW2 workign and HMC regresses to http://arxiv.org/pdf/hep-lat/0610075.pdf 2015-12-28 16:38:31 +00:00
paboyle
0afcf1cf13 Moved all the HMC tests over to using a single HmcRunner class that manages checkpoint strategies and such like 2015-12-22 11:19:25 +00:00
paboyle
08edbb5cbe HMC bit repro across checkpoints. Fixed parallel RNG issue with threading. 
Conclusion: c++11 distributions not thread safe and must us distinct dist as well as distinct engine
per site. Makes sense when you think of box muller. Also added a reset of dist on fill to ensure
repro across checkpoints.
 2015-12-22 08:54:40 +00:00
paboyle
0abfbcc8eb Naming of files improvement. 2015-12-21 15:37:26 +00:00
paboyle
1b94253ba4 Logging improvement 2015-12-21 15:36:28 +00:00
paboyle
31ca609d12 HMC checkpointing . 
Need a general HMC framework to work in restart.
 2015-12-20 02:29:51 +00:00
Peter Boyle
638d6675ee Tested rms dH is ~ dt^4 numerically, so believe the ForceGradient is correct now. 
Paranoia makes me want to diddle with the FG step to ensure dt^2 reappears.
 2015-08-31 16:33:20 +01:00
Peter Boyle
357c6ab46d Reunitarise. Complete the HMC and integrator changes. 2015-08-31 16:32:04 +01:00
Peter Boyle
755dca9533 Added ForceGradient integrator. dH dropped so seems to work. Will only 
believe it is right once I have pulled a dt^4 error scaling plot out.
 2015-08-31 06:23:02 +01:00
Peter Boyle
29fd004d54 Unified integrator and integrator algorithm into virtual class used as a policy for the 
HMC.
 2015-08-30 13:39:19 +01:00
Peter Boyle
aa52fdadcc Global edit on HMC sector -- making GaugeField a template parameter and 
preparing to pass integrator, smearing, bc's as policy classes to hmc.

Propose to unify "integrator" and integrator algorithm in a base/derived
way to override step. Want to read through ForceGradient to ensure
that abstraction covers the force gradient case.
 2015-08-30 12:18:34 +01:00
Peter Boyle
76d752585b Started a tidy up in the HMC sector. Now comfortable with the two level integrators; 
to a little figure out what Guido had done & why -- but there is a neat saving of force
evaluations across the nesting time boundary making use of linearity of the leapP in dt.

I cleaned up the printing, reduced the volume of code, in the process sharing printing
between all integrators. Placed an assert that the total integration time for all integrators
must match at end of trajectory.

Have now verified e-dH = 1 for nested integrators in Wilson/Wilson runs with both
Omelyan and with Leapfrog so substantial confidence gained.
 2015-08-29 17:18:43 +01:00
Peter Boyle
b8166af92b Unused apparently 2015-08-16 01:41:05 +01:00
Peter Boyle
55cfc89459 * Finished the template/policy style introduction of gparity, except the gparity force terms. 
So valence sector looks ok.

FermionOperatorImpl.h provides the policy classes.

Expect HMC will introduce a smearing policy and a fermion representation change policy template
param. Will also probably need multi-precision work.

* HMC is running even-odd and non-checkerboarded (checked 4^4 wilson fermion/wilson gauge).

There appears to be a bug in the multi-level integrator -- <e-dH> passes with single level but
not with multi-level.

In any case there looks to be quite a bit to clean up.

This is the "const det" style implementation that is not appropriate  yet for clover since
it assumes that Mee is indept of the gauge fields. Easily fixed in future.
 2015-08-15 23:25:49 +01:00
Peter Boyle
35feb93f56 Merge branch 'master' of https://github.com/paboyle/Grid 
Conflicts:
	lib/Make.inc
	lib/qcd/hmc/HMC.h
	tests/Make.inc
	tests/Test_hmc_WilsonFermionGauge.cc
 2015-08-01 22:24:54 +09:00
neo
490009745c Small change in the HMC interface. 
Example of multiple levels in the WilsonFermion hmc test.

Merge remote-tracking branch 'upstream/master'

Conflicts:
	lib/qcd/hmc/HMC.h
	lib/qcd/hmc/integrators/Integrator.h
	lib/qcd/hmc/integrators/Integrator_algorithm.h
	tests/Test_simd.cc
 2015-07-30 17:16:57 +09:00
Peter Boyle
9ff0b2987c Bug in two flav pseudofermion corrected to reimport gauge field upon rejection. 
exp(-DeltaH) = 1 now, and plaquette is sensible. Will reproduce an old Wilson Gauge
Wilson Fermion SCRI plaquette with precision in mass matching shortly.
 2015-07-29 21:02:07 +09:00
Peter Boyle
4fe110bd07 Two flavour HMC for Wilson/Wilson is conserving energy. 
Still to check plaq and <e(-dH)>, but nevertheless this is
progress
 2015-07-29 17:53:39 +09:00
Peter Boyle
4cc2ef84d3 Committing incomplete work for parameter file I/O. 
MacroMagic.h is central. Guido and I plan to move
over to generating virtual (XML, JSON, YAML, text, binary) encoding
from macro based system.
 2015-07-27 18:32:28 +09:00
Peter Boyle
d9d4c5916a Elemental force term for Wilson dslash added and tests thereof passing. 
Now need to construct pseudofermion two flavour, ratio, one flavour, ratio
action fragments.
 2015-07-26 10:54:38 +09:00
Peter Boyle
d1afebf71e Sizable improvement in multigrid for unsquared. 
6000 matmuls CG unprec
2000 matmuls CG prec (4000 eo muls)
1050 matmuls PGCR on 16^3 x 32 x 8 m=.01

Substantial effort on timing and logging infrastructure
 2015-07-24 01:31:13 +09:00
neo
5fc6af1c77 Merge remote-tracking branch 'upstream/master' 2015-07-21 17:17:50 +09:00
Peter Boyle
4e94ddad46 Merge 2015-07-21 13:56:22 +09:00
Peter Boyle
df2aac01f4 This was needed to compile on gcc 2015-07-21 13:52:59 +09:00
neo
97afe4125f Cleaning up files for HMC 2015-07-07 14:59:37 +09:00
neo
0f21c38ff8 Simplifying HMC syntax for the final user 2015-07-06 18:32:20 +09:00
neo
fa42b652e5 Rearranging files in hmc 2015-07-06 16:46:43 +09:00
neo
68fe0769a1 Added minimum norm integrator 
Little rearrangement of HMC and integrator classes
 2015-07-06 16:17:32 +09:00