paboyle
16b37b956c
divide goes to ET
2016-09-26 09:37:59 +01:00
paboyle
567b6cf23f
demangle moves to logging
2016-09-26 09:36:51 +01:00
paboyle
296396646d
FPE's on macos set up
2016-09-26 09:36:14 +01:00
Guido Cossu
5c190a1b8c
Merge branch 'develop' into feature/hirep
2016-09-23 11:06:06 +01:00
Guido Cossu
c4ac6e7e8f
Consolidating HMC interface
...
Uniformed interface for standard action in fundamental rep and Hirep
2016-09-23 10:47:42 +01:00
Guido Cossu
510e340e16
Debugged last commit for the Two index representation
2016-09-22 22:16:21 +01:00
Guido Cossu
6ffadca153
Restored number of colours to 3
2016-09-22 14:22:54 +01:00
Guido Cossu
b6597b74e7
Added support for the Two index Symmetric and Antisymmetric representations
...
Tested for HMC convergence: OK
Added also a test file showing an example for mixed representations
2016-09-22 14:17:37 +01:00
a034e9901b
Merge branch 'develop' into feature/hadrons
2016-09-20 13:49:33 +01:00
Antonin Portelli
0724f7af75
QPX single precision implementation
2016-09-19 18:09:12 +01:00
2e74520821
removed libtool use (BG/Q compatibility)
2016-09-16 15:25:49 +01:00
Antonin Portelli
6dd75ad9e5
Merge branch 'develop' of github.com:paboyle/Grid into feature/bgq
2016-09-16 15:07:54 +01:00
Guido Cossu
fda408ee6f
Added first lines for supporting Two Index representations
2016-09-13 10:43:30 +01:00
Guido Cossu
b9c80318a2
Merge branch 'develop' into feature/hirep
2016-09-13 10:01:51 +01:00
Guido Cossu
5df5d52d41
Fix for the Intel compiler
2016-09-12 17:17:20 +01:00
Guido Cossu
f76f281e58
Cleaning files after fix
2016-09-09 11:34:25 +01:00
Guido Cossu
aa20cc8b52
Fixing compilation error with AVX512 flag
2016-09-09 02:58:52 -07:00
Guido Cossu
0fd179fb33
Merge branch 'develop' into feature/hirep
2016-09-01 12:59:53 +01:00
Guido Cossu
f45ef8d114
Minor modification in ActionBase.h
2016-09-01 11:46:46 +01:00
paboyle
8535d433a7
Cold or hot must support any precisoin
2016-08-31 00:27:53 +01:00
paboyle
b573d1f35a
Wilson tree level added
2016-08-31 00:27:04 +01:00
paboyle
0c1d7e4daf
Mom space prop for Wilson action
2016-08-31 00:26:36 +01:00
paboyle
02e983a0cd
Momentum space prop and free prop convolution
2016-08-31 00:26:02 +01:00
paboyle
d15ab66aae
FFT moves higher in include order
2016-08-31 00:25:22 +01:00
paboyle
9005b82c6d
Multi dim FFT, and normalisation fix
2016-08-31 00:24:52 +01:00
paboyle
3475f45ce7
Demangle support for typeid stuff
2016-08-31 00:23:48 +01:00
paboyle
0744f38866
Demangle support is useful
2016-08-31 00:23:28 +01:00
Guido Cossu
fd5614738d
Merge branch 'develop' into feature/hirep
2016-08-30 18:21:36 +01:00
Guido Cossu
b0d3e4bb2c
Separating travis builds
2016-08-30 13:44:07 +01:00
Guido Cossu
b512ccbee6
HMC for Adjoint fermions works
...
Accepts and reproduces known results
Check initial instability of inverters
when starting from hot configurations
2016-08-30 11:31:25 +01:00
paboyle
8c89391c02
FFTW unresolved fixed when no fftw3.h
2016-08-24 16:41:47 +01:00
paboyle
bfac5195b8
tidy up
2016-08-24 16:38:36 +01:00
paboyle
744691097f
Printing
2016-08-24 15:05:56 +01:00
paboyle
ff6da364e8
FFT double and single precision gives good performance now in multithreaded code.
2016-08-24 15:05:00 +01:00
4d11a6f5f2
first commit for QPX intrinsics
2016-08-23 14:41:44 +01:00
paboyle
88be3b39bb
Merge branch 'develop' of https://github.com/paboyle/Grid into develop
2016-08-22 18:29:36 +01:00
paboyle
356e7940fd
fftw can be switched off
2016-08-22 16:24:49 +01:00
paboyle
73ce476890
Include fftw headers
2016-08-22 16:24:21 +01:00
paboyle
e423a09974
FFT improved and test_FFT passing under MPI 8 processes, 8^4 for LatticeComplexD and LatticeSpinMatrixD
2016-08-18 02:23:21 +01:00
paboyle
17097a93ec
FFTW test ran over 4 mpi processes.
2016-08-17 01:33:55 +01:00
paboyle
4ab7dbfd57
Instantiate
2016-08-15 23:00:40 +01:00
paboyle
90e70790f3
Feature for z-Mobius prep
2016-08-15 22:31:29 +01:00
Guido Cossu
9c2e8d5e28
Nc=3 just to let all the test pass in Travis
2016-08-09 15:46:57 +01:00
Guido Cossu
147e2025b9
Added unit tests on the representation transformations
...
Status: Passing all tests
2016-08-08 16:54:22 +01:00
b1cfb4d661
first try at a nicer Doxygen implementation
2016-08-05 15:29:18 +01:00
paboyle
32bc7a6ab8
MPI back out of change that hangs
...
AVX2 for clang, gcc needs the -mfma flag.
2016-08-05 10:36:00 +01:00
7ff7c7d90d
Merge branch 'develop' into feature/hadrons
2016-08-04 16:22:10 +01:00
93d29bb699
build system improvements after discussion with Peter
2016-08-04 16:19:59 +01:00
2485ef9c9c
Merge branch 'feature/new-build' into feature/hadrons
...
# Conflicts:
# Makefile.am
# scripts/copyright
2016-08-03 16:49:16 +01:00
9e5b934d21
improved LAPACK configuration
2016-08-02 17:26:54 +01:00
Guido Cossu
49b5c49851
Checked the hermiticity of the op in derivative, ok
...
Still CG fails to converge
2016-07-31 12:37:33 +01:00
e9f30cab2c
first working version for the new build system
2016-07-30 17:53:18 +01:00
Guido Cossu
089f0ab582
Debugged HMC for Creutz relation
2016-07-28 16:44:41 +01:00
Guido Cossu
b93e18ed50
Modified the Dirac Kernel class to compile with different number of colours
...
Added the general push_back functionality to accomodate for all defined representations
Compiles, not tested
2016-07-18 16:36:28 +01:00
Guido Cossu
9c77bb69a5
Added all elements for Hirep HMC
...
TODO: Test and debug
2016-07-18 12:05:23 +01:00
paboyle
f9e90eeb1f
Sign error on the force for 4d fields fixed
2016-07-16 01:52:44 +01:00
paboyle
fad5c675eb
sign error on the 4d gparity force
2016-07-16 01:51:56 +01:00
paboyle
4908b77d46
Fixed conflicts. PLEASE avoid making wholesale cosmetic only changes, this created
...
a HUGE amount of difficult to resolve and understand conflicts .
Wholesale formatting, reordering functions etc... in a central file like Tensor_class
or Grid_vector_types while others are also editing without making substantial functionality
changes creates pain.
2016-07-15 20:59:07 +01:00
paboyle
f4dd5062d7
Merge branch 'develop' of https://github.com/paboyle/Grid into develop
2016-07-15 19:26:06 +01:00
paboyle
980ff18956
Solving the instantiation no compile issue
2016-07-15 17:19:44 +01:00
Guido Cossu
7edf4c6c04
Added HMC utitities for the higher representations
...
TODO: Inherit types for the pseudofermions, Debugging, testing
2016-07-15 13:39:47 +01:00
paboyle
1a6c7204ac
Disable instantiation; Use cache version instead
2016-07-15 00:34:39 +01:00
paboyle
49310fbab3
Done with red black change over
2016-07-15 00:08:43 +01:00
paboyle
5c0c8efb9e
Updated file list
2016-07-15 00:02:11 +01:00
paboyle
dfd714e1ef
Multiple implementations for the 5d hopping terms, depending on cache friendly
...
ops and/or the 5th direction being vectorised
All use 4d redblack.
2016-07-15 00:00:09 +01:00
paboyle
79a8ca1a62
Rewrite for performance. Impl dependent instantiations give
...
4d linalg impls of the 5d hopping terms (and inverse)
Cache friendly loop orderings of the above
Dense matrix stored and apply to the above
-- Switch to Ls vectorised, and use dense matrix approach for the MooeeInv
and rotate/shift of the Mooee M5D routines.
2016-07-14 23:58:15 +01:00
paboyle
fb45eb2eb2
5d ls vec rename of impl class
2016-07-14 23:57:26 +01:00
paboyle
a307274c96
Fermion impl rename for ls vectorised 5d approaches
2016-07-14 23:56:13 +01:00
paboyle
3f2c44a5fe
Updating the class to 5d selection based on impl type
2016-07-14 23:55:26 +01:00
paboyle
48fb1cdc11
Update domain 5d vectorised impl type, move the type over to 4d redblack with
...
the dense OO inverse
2016-07-14 23:54:35 +01:00
paboyle
8a79e93cc2
Rename the 5d domain wall fermion vectorised Ls impl class
2016-07-14 23:53:00 +01:00
paboyle
dd62a61c5c
Added broadcast and rotation of simd vectors
2016-07-14 23:49:00 +01:00
paboyle
8f47d0b5ab
Rotation needed for hopping term in fifth dim with Ls vectorised fields
2016-07-14 23:45:36 +01:00
paboyle
42af132dab
Fix for chris kellys request to peek poke on checkerboarded fields
2016-07-14 23:44:48 +01:00
paboyle
adbc7c1188
Adding files for multiple implementations (cache opt) and Ls vectorisation
...
of the 5D cayley form chiral fermions for the 5d matrix. With Ls entirely
in the vector direction, s-hopping terms involve rotations.
The serial dependence of the LDU inversion for Mobius and 4d even odd
checkerboarding is removed by simply applying Ls^2 operations (vectorised
many ways) as a dense matrix operation.
This should give similar throughput but high flops (non-compulsory flops)
but enable use of the KNL cache friendly kernels throughout the code.
Ls is still constrained to be a multiple of Nsimd, which is as much as 8 for AVX512
with single precision.
2016-07-14 22:59:21 +01:00
Guido Cossu
9dc345e8e8
Debugged smearing and adding HMC functions for hirep
2016-07-13 17:51:18 +01:00
Christopher Kelly
6f47fbb1e2
Disabled parallel for loops in ExtractSlice and InsertSlice due to race conditions. Likely will need to do so for localConvert too.
2016-07-13 10:49:18 -04:00
Guido Cossu
a9ae30f868
Added representations definitions for the HMC
2016-07-12 13:36:10 +01:00
Christopher Kelly
a3c0fb79b6
Fix to iVector and iMatrix pokeIndex and checkerboard local site indexing.
2016-07-11 17:15:22 -04:00
paboyle
62601bb649
Bug fix
2016-07-08 20:46:29 +01:00
paboyle
ef97e32152
Adding persistent communicators
2016-07-08 17:16:08 +01:00
Guido Cossu
daea5297ee
Wrote the projector in the adjoint representation algebra
2016-07-08 16:14:16 +01:00
Guido Cossu
5028969d4b
Added generators for the adjoint representation
2016-07-08 15:40:11 +01:00
paboyle
a0676beeb1
Open up dependency on Eigen and FFTW
2016-07-07 22:31:07 +01:00
Christopher Kelly
c5106d0c03
Bugfix
2016-07-07 16:06:30 -04:00
Guido Cossu
fbf96b1bbb
]Merge branch 'develop' into feature/hirep
2016-07-07 14:20:10 +01:00
Guido Cossu
3c49ddfaa4
Merge branch 'temporary-smearing' into develop
2016-07-07 14:04:59 +01:00
Guido Cossu
ffb8b3116c
Tested smeared RHMC Wilson1p1, accepting
2016-07-07 11:49:36 +01:00
Christopher Kelly
dd8cfff111
Another fix for pedantic compilers
2016-07-06 18:22:15 -04:00
Christopher Kelly
184642adb0
Fix for pedantic compilers
2016-07-06 18:15:15 -04:00
Christopher Kelly
4774a3bcd2
Generalized HotConfiguration and functions it calls to accept gauge fields with precision other than the default.
2016-07-06 18:01:08 -04:00
Christopher Kelly
25fafa9a89
Comment
2016-07-06 16:19:41 -04:00
Christopher Kelly
85ed8175cb
Implemented mixed precision CG. Fixed filelist to exclude lib/Old directory and include Config.h.
2016-07-06 15:57:04 -04:00
Christopher Kelly
df5c788ef2
Merge branch 'develop' into feature/multi_prec
2016-07-06 14:52:28 -04:00
Christopher Kelly
15f22425c8
Added option to prevent CG from exiting when it fails to converge
2016-07-06 14:50:01 -04:00
Guido Cossu
e87182cf98
Debugged the copy constructor of the Lattice class
2016-07-06 15:31:00 +01:00
Guido Cossu
e3d5319470
Debugged the real() and imag() functions and added tests to Test_Simd
2016-07-06 14:16:03 +01:00
Guido Cossu
ffedeb1c58
Minor modifications
2016-07-06 11:41:27 +01:00
Guido Cossu
3e3b367aa9
Small changes in the Log files
2016-07-05 15:05:28 +01:00
Guido Cossu
3e80947c2b
Cleaned up HMC output. Tested smeared HMCs for single precision (OK)
2016-07-05 12:03:54 +01:00
Guido Cossu
fdfbf11c6d
Merge branch 'develop' into temporary-smearing
2016-07-04 18:45:10 +01:00
Guido Cossu
9cb90f714e
Merge remote-tracking branch 'origin/develop' into temporary-smearing
2016-07-04 17:28:40 +01:00
Guido Cossu
2daffdf95d
Tested smeared WilsonRatio action, accepts
2016-07-04 16:17:28 +01:00
Guido Cossu
149f826601
Tested smearing for Nf2 WilsonFermionAction, non EO: accepts
2016-07-04 16:09:19 +01:00
Guido Cossu
cd8ee27080
Simple change in iGamma for smearing
2016-07-04 16:02:57 +01:00
Guido Cossu
0fa66e8f3c
Debugged smearing for EOWilson, accepts
2016-07-04 15:35:37 +01:00
Guido Cossu
8dd099267d
Corrected a bug in the Expression Templates (acso and asin were wrong)
2016-07-03 12:28:25 +01:00
Guido Cossu
1a6d65c6a4
Converted set_uw and set_fj to all complex functions
2016-07-03 10:27:43 +01:00
paboyle
fc4a043663
Colors and banner clean up
2016-07-02 16:15:38 +01:00
Guido Cossu
092fa0d8da
Debugged set_fj,
...
to be fixed: BUG in imag()
2016-07-01 16:06:20 +01:00
e0b7004f96
Merge branch 'master' into feature/hadrons
2016-07-01 15:54:34 +01:00
paboyle
680645f849
Merge branch 'release/v0.5.0'
2016-06-30 15:15:03 -07:00
paboyle
712b9a3489
Asm only for avx512
2016-06-30 14:35:02 -07:00
paboyle
bdaa5b1767
Updated to have perfect prefetching for the s-vectorised kernel with any cache blocking.
2016-06-30 14:35:02 -07:00
paboyle
8fcefc021a
Improved the prefetching when using cache blocking codes
2016-06-30 14:35:02 -07:00
paboyle
1445189361
COntrol the prefetch strategy
2016-06-30 14:35:02 -07:00
paboyle
05c884a62a
Prefetch change
2016-06-30 14:35:01 -07:00
paboyle
a25bec87d9
Prefetch during save
2016-06-30 14:35:01 -07:00
paboyle
2d8bb4c594
Tweaks
2016-06-30 14:35:01 -07:00
paboyle
51cb2d4328
update file lists
2016-06-30 14:35:01 -07:00
paboyle
6d58cb2a68
Enable reordering of the loops in the assembler for cache friendly.
...
This gets in the way of L2 prefetching however. Do next next link in stencil
prefetching.
2016-06-30 14:35:01 -07:00
Guido Cossu
565e9329ba
Changed the colouring classes
2016-06-30 16:51:03 +01:00
Guido Cossu
5e02392f9c
Fixed compilation error for benchmark_dwf
...
Some parts were assuming floating point precision
2016-06-20 12:30:51 +01:00
75fc295f6e
Merge branch 'hadrons' into feature/hadrons
2016-06-14 17:51:15 +01:00
Richard Rollins
86187d7cca
Removed write to stdout in constructor for MPI CartesianCommunicator
2016-06-14 15:34:20 +01:00
paboyle
87418e7df1
Slightly faster prefetching perf.
2016-06-13 02:32:52 -07:00
paboyle
55f65b81b5
Improvements to the assembler interface that let us move chunks of the
...
site and s loop into the kernels. This will save on function call overhead and
guarantee L2 prefetching strategy is right since OMP can't distribute the
sub-chunks of work.
2016-06-09 01:12:36 -07:00
Azusa Yamaguchi
d9408893b3
Prefetching in the normal kernel implementation.
2016-06-08 05:43:48 -07:00
paboyle
8ac021de73
Added a test an fixed it for red black precon Ls innermost vectorised DWF
2016-06-07 13:16:56 -07:00
paboyle
e503ef5590
Cleaned up
2016-06-07 00:11:36 +01:00
paboyle
a7682b0060
Only instantiate the one routine to avoid duplicate symbol under g++5/MacOS
2016-06-06 23:48:21 +01:00
paboyle
d4c9d71fc8
Merge branch 'master' of https://github.com/paboyle/Grid
2016-06-06 07:06:54 -07:00
paboyle
786ca52c43
Problems remain in the red black preconditioning of the Ls vectorisation
2016-06-06 07:05:51 -07:00
Peter Boyle
f78d89bcbe
Update Lebesgue.cc
...
kill verbose
2016-06-03 13:33:42 +01:00
paboyle
53d06046b0
Compiling updates for KNL
2016-06-03 03:47:54 -07:00
paboyle
139cc5f1ae
Large change with KNL preparation
2016-06-03 03:24:26 -07:00
1826ed06a3
Merge branch 'master' into hadrons
2016-05-27 16:50:31 +01:00
1c0e922585
Merge pull request #35 from aportelli/master
...
empty SIMD fix
2016-05-27 16:49:13 +01:00
9d5f693cbe
empty SIMD fix
2016-05-24 10:56:27 +01:00
Peter Boyle
5c90c3b457
Merge pull request #34 from aportelli/master
...
Polymorphic lattices & various small updates
2016-05-24 10:50:04 +01:00
3ff96c502b
Merge branch 'master' into hadrons
2016-05-12 19:24:18 +01:00
91e04056f9
fix of the empty SIMD
2016-05-12 19:24:10 +01:00
15a0908bfc
Merge branch 'master' into hadrons
2016-05-12 18:35:46 +01:00
3789e3f31c
additional fixed in slice functions
2016-05-12 18:35:38 +01:00
07f0b69784
Merge branch 'master' into hadrons
2016-05-12 13:02:18 +01:00
0c66719210
const fix in slice functions
2016-05-12 13:01:35 +01:00
362f255100
Hadrons: module parameters can now be accessed from outside
2016-05-12 11:59:28 +01:00
paboyle
3a5b5c8bec
Save an old tar of tree
2016-05-12 03:20:17 -07:00
3d78ed03ef
Merge branch 'master' into hadrons
2016-05-11 15:21:46 +01:00
4bc21ec7cb
thread CL argument fix
2016-05-11 15:21:29 +01:00
e3083b6dfc
Merge commit 'ab894186589224d570e0ecef8eea06443194a8ab'
2016-05-11 15:20:41 +01:00
paboyle
ab89418658
Precision change going in; useful for mixed precision algorithms for example.
2016-05-11 15:18:47 +01:00
paboyle
28cd99882c
Subslicing
2016-05-11 15:06:54 +01:00
paboyle
aceaee774c
ExtractSlice / InsertSlice for lower dimensional lattices where the lattice is not
...
distributed in the orthogonal direction.
Useful for fermion 4d/5d etc..
2016-05-11 14:12:02 +01:00
312637e5fb
Merge branch 'master' into hadrons
...
# Conflicts:
# lib/Log.h
2016-05-04 12:16:18 -07:00
101aa769eb
LatticeBase contain the grid pointer and a virtual destructor to allow polymorphic lattice pointers
2016-05-04 12:15:31 -07:00
0bf99bfde5
log polish
2016-05-04 12:14:49 -07:00
64bf6fe54e
macro to dump NERSC header to a stream
2016-05-04 12:14:38 -07:00
1161d566b9
minor code cleaning
2016-05-02 19:32:11 -07:00
d08d93c44c
Merge branch 'master' into hadrons
2016-05-01 18:30:44 -07:00
c698b16d75
function to generate Chroma-style gamma matrix products
2016-05-01 18:30:35 -07:00
c4c89336fe
SliceSum: shutting down warning about non-threaded code for now
2016-05-01 18:29:57 -07:00
fa59789580
ConjugateGradient: cleaner output
2016-05-01 18:29:20 -07:00
0ab10cdedb
Merge branch 'master' into hadrons
2016-05-01 16:08:05 -07:00
92c2c7d3b5
SchurRedBlackDiagMooeeSolve: fix: guess was not initialised from input
2016-05-01 16:07:55 -07:00
e99ce0875f
directly exit when using '--help' option
2016-05-01 16:05:16 -07:00
beb11fd4ef
Merge branch 'master' into hadrons
2016-05-01 10:32:24 -07:00
paboyle
c23375cd65
Testing travis CI integration
2016-04-30 06:30:56 -07:00
paboyle
f7ca6ca889
Bernoulli reenabled -- using integral type for the discrete_distribution, but
...
then casts in the fill
2016-04-30 03:48:28 -07:00
paboyle
ec4a9b7f6c
The Bernoulli gives a no compile due to a static assertion that the type be integral
...
in 4.7 random.h
Probably need to go through an Integer type, and then conver to real after the random draw
to make clean.
2016-04-30 03:42:24 -07:00
paboyle
5341977948
IMCI fixes. Thought I had committed these. The "real" disambiguation
...
between std::real and Grid::real shouldn't have been necessary and I don't
know why only the icpc v16.0 on babbage hits it.
May need a longer term rename of Grid::real or some careful EnableIf work.
2016-04-30 03:34:16 -07:00
dc5f32e5f0
Merge branch 'master' into hadrons
2016-04-30 00:18:31 -07:00
f6c53e5039
Merge commit '1e554350acae0e67fa7177ed0db9d4f684a54af2'
2016-04-30 00:17:52 -07:00
405b175665
Merge branch 'master' into hadrons
2016-04-30 00:16:06 -07:00
ba09cbae3e
function to read std::vector from a string (blank separated values)
2016-04-30 00:15:44 -07:00
6aa000176f
Fermion <-> Propagator functions
2016-04-30 00:14:33 -07:00
23b6172c31
Bernoulli RNG
2016-04-30 00:14:13 -07:00
3f128443ab
OS X icpc fix
2016-04-30 00:13:33 -07:00
paboyle
1e554350ac
The threaded coms didn't agree with GCC. Suprised, and looks like GCC bug.
2016-04-29 16:49:18 -07:00
paboyle
c79ea0dcef
Fixingn IMCI
2016-04-22 21:52:54 -07:00
paboyle
e3f141f82f
Fixed SSE compile with typecasts
2016-04-22 10:30:30 -07:00
paboyle
a6dfa2386b
GCC choked on intrinsics calls that ICPC did not
2016-04-22 06:33:41 -07:00
Peter Boyle
d9b5e66877
Update Make.inc
2016-04-20 18:25:48 +01:00
paboyle
8fd8bc25e9
simd 5th dim with rotation
2016-04-19 15:39:00 -07:00
paboyle
ba427abde9
simd 5d
2016-04-19 15:38:39 -07:00
paboyle
9b6ab6db16
simd in 5th dimension support
2016-04-19 15:38:01 -07:00
paboyle
806a83d38b
simd in fifth dim support for dwf
2016-04-19 15:36:19 -07:00
paboyle
7223753355
Rotate in a direction > 2 for simd_layout
2016-04-19 15:35:15 -07:00
paboyle
b27bac4669
Updates for simd in one dir
2016-04-19 15:34:10 -07:00
paboyle
c8a93d6a93
Cartesian changes to allow all simd in one direction
2016-04-19 15:18:12 -07:00
paboyle
04072a5e1f
Rotate is a temporary hack. Would like to merge ALL
...
permutes as rotates of length 2, and make any rotate active
over any subset of lane bits. This is hard, and requires general
permute; current intrinsics mean this is only really possible for specific
case by case encodings as presently performed. Intel could produce a general
permute.. would help. IBM did it in VMX.
2016-04-19 15:15:34 -07:00
paboyle
574ea4f843
const safety
2016-04-19 15:15:11 -07:00
paboyle
587f80cd93
Updated to compile and pass under intel SDE
2016-04-19 15:13:54 -07:00
paboyle
528eb773ad
Merged.
...
Merge branch 'master' of https://github.com/paboyle/Grid
2016-04-19 22:24:34 +01:00
paboyle
e5657510b0
Rotate support for Ls simd-ized
2016-04-19 22:24:18 +01:00
paboyle
f473919526
Rotate support
2016-04-19 22:23:51 +01:00
e33b0f6ff7
cleaner output
2016-04-16 08:41:53 +01:00
9ee54e0db7
debug output removed
2016-04-16 08:41:28 +01:00
Christopher Kelly
ab56ccdd25
-Complete and working implementation of Grid_empty
2016-04-15 13:17:42 -04:00
neo
339be37dba
Debugging smeared HMC
2016-04-13 17:00:14 +09:00
neo
a87b744621
HMC runs but does not accept with smearing on
2016-04-07 16:45:11 +09:00
Christopher Kelly
a646260e82
Merge remote-tracking branch 'origin/master' into ckelly-dec12-2015
2016-04-06 13:57:28 -04:00
Christopher Kelly
af9c8d1372
-Checkerboard fixes for Lanczos
2016-04-06 13:50:56 -04:00
paboyle
b1192a8908
Benchmark_zmm added
2016-04-06 03:00:07 -07:00
paboyle
e8dddb1596
Adding extra benchmark
2016-04-06 10:32:54 +01:00
97d0d56bcb
Debugging Smearing routines (set_fj)
2016-04-06 17:58:43 +09:00
paboyle
c7ba47bdc7
Merge branch 'master' of https://github.com/paboyle/Grid
2016-04-06 02:56:28 +01:00
7c7ea35ffb
Putting the Traceless Antihermitian part outside the deriv in pseudofermion actions
2016-04-05 16:28:09 +09:00
4b1cf580e0
Debugging the Smearing routines
2016-04-05 16:19:30 +09:00
paboyle
e67fc2be18
Adding a trial for openmp overhead minimisation
2016-03-31 16:00:37 +01:00
paboyle
f473ef7591
Fixing the compile
2016-03-31 07:47:42 -07:00
paboyle
8052556275
Cleaning up the single/double kernel implementation switch
2016-03-31 14:51:32 +01:00
paboyle
60d965f79e
AVX512 improvements; sigfpe trapping too
2016-03-30 08:42:34 +01:00
paboyle
83b15bfcdd
Better Avx512 assembly sequence for SU3 using fmaddsub to get the imag imag sign
2016-03-30 08:39:39 +01:00
paboyle
1ecbf9794d
Merge branch 'master' of https://github.com/paboyle/Grid
2016-03-30 08:37:55 +01:00
paboyle
2ded354403
configure
2016-03-30 00:17:43 -07:00
paboyle
340428a1fe
Eigen fixes and HDCR work
2016-03-30 00:16:02 -07:00
paboyle
c77b7ee897
AddSub based alternate SU3 routine
2016-03-28 17:55:22 -06:00
paboyle
b6c3bc574b
Moving to a more coherent organisation of the inline assembly and arch dependencies.
2016-03-28 16:24:37 +01:00
paboyle
1e355a51e1
Interface change
2016-03-27 23:46:55 -07:00
paboyle
ad80f61fba
AVX512 shaken out
2016-03-28 00:38:05 -06:00
paboyle
21abaf7e91
Gamma sign change
2016-03-28 00:35:45 -06:00
paboyle
165bffc2e7
Avx512 changes for assembler kernels
2016-03-26 22:25:45 -06:00
paboyle
644fd6d32e
Build avx512 clean
2016-03-25 09:35:33 -07:00
azusa
f54e0ec9bd
Try lanczos to set up hdcr subspace
2016-03-17 10:36:16 +00:00
paboyle
60d4564151
ICC no compile fix
2016-03-16 02:30:40 -07:00
paboyle
d4e57f4bc6
IO Bandwidth reporting
2016-03-16 02:30:16 -07:00
paboyle
3920b2c0ab
HDCR updates
2016-03-16 02:29:58 -07:00
paboyle
2733c4b93c
hdcr updates
2016-03-16 02:29:37 -07:00
paboyle
36a800f26c
Microsecond granularity support
2016-03-16 02:28:51 -07:00
paboyle
b75da563d9
Resurrect timestamp. Should make optional
2016-03-16 02:28:17 -07:00
paboyle
f9faec38be
Printing fix under comms none
2016-03-16 02:27:53 -07:00
paboyle
d6b64f47d9
Uint64 sum for IO rates
2016-03-16 02:27:22 -07:00
paboyle
a359f7a9f5
Merge branch 'master' of https://github.com/paboyle/Grid
2016-03-11 16:07:07 -08:00
paboyle
b606deb3f0
Uint64 gsum
2016-03-11 16:06:54 -08:00
paboyle
090e7aa930
Merge remote-tracking branch 'origin/chulwoo-dec12-2015'
...
Merge Chulwoo's Lanczos related improvements.
Merge Nd!=4 fixes for pure gauge HMC from Evan.
2016-03-08 09:55:14 +00:00
paboyle
2dce9c3cff
HDCR running on 16^3 with 2x-3x speed up.
2016-03-08 01:01:50 -08:00
paboyle
dc72293398
More timing info
2016-03-06 10:46:55 -08:00
paboyle
e55c35734b
Fix a nocompile
2016-03-03 20:33:28 +00:00
paboyle
325e745daa
Merge branch 'master' of https://github.com/paboyle/Grid
2016-03-02 07:04:03 -08:00
paboyle
61413565d0
Back off the inlined spin proj as not working
2016-03-02 07:03:09 -08:00
paboyle
ff129d9ad9
Redundant operations removed
2016-03-02 07:02:37 -08:00
paboyle
03fcd3b33a
Back out of the colour
2016-03-02 07:01:15 -08:00
paboyle
68b02da483
Backing off the colour
2016-03-02 07:00:43 -08:00
paboyle
e051119769
extern "C" should have been in the header file, but Cray is apparently not C++ friendly.
2016-03-02 07:00:00 -08:00
2d8bb356e3
Smearing routines compile (still untested)
2016-02-25 02:43:59 +09:00
a7251f28c7
Stout smearing compiles (untested)
2016-02-24 03:16:50 +09:00
1eb169ac0b
compatibility fix
2016-02-23 16:36:50 +00:00
5674c3e241
cycle count fix for x86
2016-02-23 16:08:18 +00:00
Antonin Portelli
497e7e4c53
BG/Q compatibility fix
2016-02-23 15:57:38 +00:00
19526d09c2
Merge commit '6aeaf6f568a391e34b913f08be6a11beb28d8842'
2016-02-22 15:23:26 +00:00
Peter Boyle
6aeaf6f568
Parallel IO worked on. I'm puzzled because I already thought I shook this out on MacOS + OpenMPI and then
...
turned up problems on the BlueWaters Cray.
Gets 75MB/s from home filesystem on parallel configuration read. Need to make the RNG IO parallel,
and also to look at aggregating bigger writes for the parallel write.
Not sure what the home filesystem is.
2016-02-21 08:03:21 -06:00
Peter Boyle
40f2db9bc0
Disable metropolis step until 10 traj covered. Should move to exposing these
...
in XML input and start having "applications" directory.
2016-02-21 08:01:44 -06:00
Peter Boyle
2cfa20cc4e
Improving the logging, got fed up with color so optionally disable.
...
Backtrace macro used everwhere
2016-02-21 07:58:53 -06:00
Peter Boyle
a5f683d124
Machine generated
2016-02-21 07:57:42 -06:00
Jung
9f0d9ade68
Added configure flag for LAPACK. Tested ImplicitlyRestartedLanczos::calc()
...
Checking in before cleaning up
2016-02-20 02:50:32 -05:00
neo
c1b1b89d17
More on smearing routines, writing APEsmear (dev)
2016-02-19 17:15:27 +09:00
neo
771235017d
Adding smearing routines (development)
2016-02-19 15:30:41 +09:00
paboyle
3425751cb8
Missing return value
2016-02-19 01:06:03 +00:00
paboyle
db5e8050a8
Attempts at some optimisation
2016-02-18 22:33:58 +00:00
paboyle
a3fbabf404
Bug fix
2016-02-18 18:08:24 +00:00
Peter Boyle
22422a84d9
Small problem in compressor fix
2016-02-17 19:03:09 -06:00
Peter Boyle
c9fadf97a5
Simplify the compressor interface again.
2016-02-17 18:16:45 -06:00
Peter Boyle
c650bb3f3d
Very small merge speed up.
2016-02-16 18:41:53 -06:00
Peter Boyle
81395e85d1
Regressing to not overlap comms and compute becasue bluewaters, edison, and cori are so rubbish at it.
2016-02-16 13:56:44 -06:00
Peter Boyle
340a29b735
More careful sequencing of comms
2016-02-15 16:04:59 -06:00
Peter Boyle
a0fc47c6f9
Cheaper implementation
2016-02-15 16:02:36 -06:00
Peter Boyle
42a9ac71d2
BUg fix, wait till complete.
2016-02-14 16:21:21 -06:00
Peter Boyle
41c2b09184
Shmem comms [NO MPI] target added. The dwf test runs and passes.
...
Not really shaken out to my satisfaction though as I want more tests done, so don't declare as working.
But committing my current while I try a few experimentals.
2016-02-14 14:24:38 -06:00
paboyle
294dbf1bf0
Compile on OpenMPI shmem
2016-02-11 23:45:51 +00:00
Peter Boyle
9548c8b91f
Had to break this out for universal access through the code base.
2016-02-11 07:40:09 -06:00
Peter Boyle
7f927a541c
Shmem related fixes for shmem compile
2016-02-11 07:37:39 -06:00
paboyle
e2f73e3ead
Updates for shmem
2016-02-10 16:50:32 -08:00
neo
6371676a75
Correcting some compilation errors for clang-sse
2016-02-10 11:37:03 +09:00
Jung
bd84c23298
definitions reconciled.
2016-01-25 16:30:59 -05:00
Jung
7aa8d5e8af
Faiing to compile, comparing with master
2016-01-25 16:03:02 -05:00
Jung
6012b0ec23
Checking in changes before changing to chulwoo-dec12-2015
2016-01-25 09:40:58 -05:00
Jung
411ac49dd7
GparityWilsonTM typedef added. Not yet tested
...
Conflicts:
configure
lib/qcd/action/fermion/WilsonKernels.h
2016-01-25 01:36:28 -05:00
Jung
b8fb05a422
Addtional routines for Lanczos (SYM2, Chebyshef)..
2016-01-25 01:26:25 -05:00
Jung
5c57d4f403
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
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Conflicts:
lib/qcd/action/fermion/WilsonKernels.h
2016-01-11 11:36:45 -05:00
paboyle
fc6ad65751
Pushed the overlap comms tweaks
2016-01-11 06:34:22 -08:00
paboyle
dafc74020c
Overlap comms compute improvements in hand op kernels, and better timing from Edison and Cori
2016-01-10 16:54:27 -08:00
paboyle
d19321dfde
Overlap comms compute changes
2016-01-10 19:20:16 +00:00
Jung
5924e5a562
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
...
Conflicts:
configure
lib/qcd/action/Actions.h
lib/qcd/action/fermion/WilsonKernels.h
2016-01-06 03:44:57 -05:00
paboyle
c99d748da6
Timing reports in benchmarks now reflect the asynch comms thread statistics
2016-01-04 14:42:16 +00:00
paboyle
02452afd36
Optional overlap of comms with compute
2016-01-04 14:18:40 +00:00
paboyle
331768dcff
Added overlap comms compute mode
2016-01-03 01:38:11 +00:00
paboyle
4aac345bea
Updated logging to colour code according to message type
2016-01-02 17:21:14 +00:00
paboyle
15c0022042
GPLv2 clarified, and copyright message and banner in Init function.
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Color is just showing off....
2016-01-02 15:22:30 +00:00
paboyle
aae8bf31a7
Global edit adding copyright and license info to every source file.
2016-01-02 14:51:32 +00:00
paboyle
1e68b1c1bd
Create a benign default for gparity twists
2016-01-02 14:06:53 +00:00
paboyle
5a80930dd2
Charge conjugation boundary conditions for gauge fields implemented as a policy
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class, changing the nature of covariant Cshifts used in
plaquettes, rectangles and staples.
As a result same code is used for the plaq and rect action independent of the BC type.
Should probably isolate the BC in a separate class that Gimpl takes as a template param.
Do the same with smearing policies.
This would then allow composition of BC with smearing etc....
2016-01-02 13:37:25 +00:00
paboyle
145a295231
Bug fix for stencil with large shifts (3+), would be important to naik term for example but did not
...
impact Wilson based nearest neighbour stencils.
2015-12-30 19:29:48 +00:00
paboyle
841a37f941
Fix to WilsonCompressor that fixes a bug in comms phase due to the sign change on gamma
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matrix in hopping term.
Add logging of time spent in CG.
2015-12-29 23:49:41 +00:00
Azusa Yamaguchi
e6cad3821c
Logging improvement
2015-12-29 19:51:18 +00:00
Azusa Yamaguchi
98de1cbb6a
Optimised version of rectangle term staples.
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~3.4x faster than the naive.
2015-12-29 19:22:59 +00:00
Azusa Yamaguchi
f7d61b8b81
Plaq plus rectangle and Iwasaki, Symanzik DBW2.
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http://arxiv.org/pdf/hep-lat/0610075.pdf plaq and rect regress plausibly over 100 trajectories
and under HMC with average plaq and rectangle coming out ok.
2015-12-28 16:39:26 +00:00
Azusa Yamaguchi
78c4e862ef
Plaq, Rectangle, Iwasaki, Symanzik and DBW2 workign and HMC regresses to http://arxiv.org/pdf/hep-lat/0610075.pdf
2015-12-28 16:38:31 +00:00
1e0be161e5
MacroMagic: inline functions to avoid double symbol issues
2015-12-23 14:20:05 +00:00
paboyle
0afcf1cf13
Moved all the HMC tests over to using a single HmcRunner class that manages checkpoint strategies and such like
2015-12-22 11:19:25 +00:00
paboyle
08edbb5cbe
HMC bit repro across checkpoints. Fixed parallel RNG issue with threading.
...
Conclusion: c++11 distributions not thread safe and must us distinct dist as well as distinct engine
per site. Makes sense when you think of box muller. Also added a reset of dist on fill to ensure
repro across checkpoints.
2015-12-22 08:54:40 +00:00
paboyle
0abfbcc8eb
Naming of files improvement.
2015-12-21 15:37:26 +00:00
paboyle
1b94253ba4
Logging improvement
2015-12-21 15:36:28 +00:00
paboyle
36e6f9ac7b
Bug fix. Guess not initialised in refresh step; didn't hit before due to luck in not having a vector
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created with NAN data.
2015-12-21 15:34:35 +00:00
paboyle
2f41691c11
Bug fix. Guess was not zeroed prior to CG call. Was earlier accidentally benign just due to luck.
2015-12-21 15:33:36 +00:00
paboyle
09bfe52840
Remove extraneous variable
2015-12-21 15:30:28 +00:00
paboyle
8c9010d0f4
Isnan check on guess and convergence assert on result
2015-12-21 15:29:46 +00:00
paboyle
42c583265c
Remove timestamp
2015-12-21 15:28:03 +00:00
paboyle
539d698492
Prototypes for CML routines
2015-12-21 15:26:42 +00:00
paboyle
31ca609d12
HMC checkpointing .
...
Need a general HMC framework to work in restart.
2015-12-20 02:29:51 +00:00
paboyle
5710966324
Options to use mersenne twister OR ranlux48 via --enable-rng flag at configure time.
...
Can save and restore RNG state via new (serial) I/O routines in a NERSC header style file.
Store a Parallel (one per site) and a single serial RNG file.
2015-12-19 18:32:25 +00:00
paboyle
e108e708a3
Wilson TM tests and compiles in
2015-12-17 23:06:33 +00:00
paboyle
6f0198d4d9
Merge branch 'master' of https://github.com/paboyle/Grid
2015-12-17 22:34:54 +00:00
paboyle
67ccb043f1
Added TM fermions for DSDR etc..
2015-12-17 22:34:28 +00:00
Azusa Yamaguchi
24a5a81c53
SSE compile fix
2015-12-16 09:09:37 +00:00
Jung
eb1759d7ea
Added Gparity instantiation to no HANDOPT case
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deleted configure (as intended?)
2015-12-16 00:04:09 -05:00
paboyle
34a0fde2ad
Fixes to fermion force terms after sign of gamma_mu (0...3) change.
...
Thought I had already committed these.
Believe I have got the Gparity fermion force working.
* tests/Test_gpdwf_force.cc -- correctly predicts dS for two flavour pseudofermion
based on a small dt update of U field.
* tests/Test_hmc_EODWFRatio_Gparity.cc -- ran 1 trajectory on 8^4 with dH=0.21.
Need to accumulate a full plaquette log to believe fully which will take some hours of run time.
2015-12-15 23:14:12 +00:00
Jung
bc34b7e808
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
...
Conflicts:
lib/qcd/action/fermion/WilsonKernels.h
tests/Make.inc
2015-12-15 11:11:59 -05:00
Jung
284453c5e9
Added gparity mobius defs, added params to ScaledShamir
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checking in before puling master
2015-12-14 12:15:06 -05:00
paboyle
af855cc129
Updating to fix peek poke to checkerboarded arrays since Chulwoo needs this.
2015-12-12 07:11:46 +00:00
paboyle
47fe6b5a7c
Merge branch 'master' of https://github.com/aportelli/Grid into aportelli-master
2015-12-10 23:14:52 +00:00
paboyle
b3ef09a54d
Merge branch 'master' of https://github.com/paboyle/Grid
2015-12-10 23:05:38 +00:00
paboyle
3ce10aa975
Fix a regression failure on Mobius; chroma regression added
2015-12-10 22:55:00 +00:00
Azusa Yamaguchi
a32a59fc43
Merge branch 'master' of https://github.com/paboyle/Grid
2015-12-09 12:48:44 +00:00
200de272ed
IO: serialisable enums
2015-12-08 13:54:00 +00:00
d68a72e28b
IO: code cleaning and string binary IO fix
2015-12-08 13:53:33 +00:00
17f9268a55
XmlIO: minor code cleaning
2015-12-07 18:30:00 +00:00
78f0c2595d
autotool file accidentally committed
2015-12-07 18:28:06 +00:00
Jung
f2b4edc090
Fixes for Gparity comparison with CPS (Instantiation, Gamma matrix convention)
2015-12-07 02:04:57 -05:00
Jung
fb81acca3c
Merge branch 'master' of https://github.com/paboyle/Grid
2015-12-03 12:11:10 -05:00
paboyle
93356fd246
No compile fixes on gcc/Cray
2015-11-29 03:14:44 -08:00
paboyle
ca42fe6d32
Merge branch 'master' of github.com:paboyle/Grid
...
Merge done
Conflicts:
lib/serialisation/XmlIO.h
tests/Test_stencil.cc
2015-11-28 17:03:43 -08:00
paboyle
6b97b271ae
Integer divide useful
2015-11-28 17:01:20 -08:00
paboyle
fa01ae5980
integer divide
2015-11-28 17:00:34 -08:00
paboyle
113131b01c
THis failed for some reason. Suspect Antonin has made more progress.
2015-11-28 16:59:59 -08:00
paboyle
b2c02a6106
Runs fastst on cori
2015-11-28 16:58:16 -08:00
paboyle
02d730513a
Divide function
2015-11-28 16:54:43 -08:00
paboyle
d875c2bd39
More verbose useful
2015-11-28 16:54:19 -08:00
paboyle
cc32ba615a
Verbose changes
2015-11-28 16:53:54 -08:00
paboyle
6684739452
Better to drop KMP_AFFINITY override
2015-11-28 16:52:44 -08:00
Peter Boyle
bc4b252883
Merge branch 'master' of https://github.com/paboyle/Grid
2015-11-29 00:33:01 +00:00
Peter Boyle
11cf0f08f3
This file is not yet debugged.
2015-11-29 00:32:45 +00:00
Peter Boyle
8a33846095
No compile fix
2015-11-29 00:29:58 +00:00
Peter Boyle
54f04ee5c9
Perf event interface was linux specfic and use ifdef to protect
2015-11-29 00:24:48 +00:00
Peter Boyle
825875fd48
compile fixes
2015-11-29 00:24:25 +00:00
Peter Boyle
f8290bfd58
Compile fixes
2015-11-29 00:24:04 +00:00
Azusa Yamaguchi
967be91692
update merge
2015-11-26 09:51:41 +00:00
06f8ecea04
Merge commit '899ca41cb8c8f47771bfd37cd895cbc2184e5560'
2015-11-16 18:16:25 +00:00
af19118113
new I/O interface
2015-11-16 18:14:37 +00:00
paboyle
e9ff25b06b
Small threading change makes a difference on Cori.
2015-11-07 00:07:05 -08:00
