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Commit Graph

42 Commits

Author SHA1 Message Date
fad743fbb1 Build system sanity check: corrected several headers not in the <Grid/*> format 2017-01-26 17:00:41 -08:00
paboyle
33dc1f51b5 Final sign off commits from Cori-1 2016-11-09 04:11:03 -08:00
75bbf6a0af Merge branch 'develop' into feature/feynman-rules 2016-11-03 13:52:11 +00:00
paboyle
111bfbc6bc notimestamp by default 2016-11-03 11:40:26 +00:00
paboyle
bb94ddd0eb Tidy up of mpi3; also some cleaning of the dslash controls. 2016-11-02 08:07:09 +00:00
ca21003f01 Merge branch 'feature/fft-opt' into feature/feynman-rules
# Conflicts:
#	lib/FFT.h
#	lib/qcd/action/fermion/WilsonFermion5D.h
#	tests/core/Test_fft.cc
2016-10-26 18:44:47 +01:00
azusayamaguchi
b6a65059a2 Update to use shared memory to contain the stencil comms buffers
Tested on 2.1.1.1 1.2.1.1 4.1.1.1 1.4.1.1 2.2.1.1 subnode decompositions
2016-10-24 17:30:43 +01:00
paboyle
a762b1fb71 MPI3 working with a bounce through shared memory on my laptop.
Longer term plan: make the "u_comm_buf" in Stencil point to the shared region and avoid the
send between ranks on same node.
2016-10-21 09:03:26 +01:00
997fd882ff Merge branch 'develop' into feature/feynman-rules
# Conflicts:
#	lib/Threads.h
#	lib/qcd/action/fermion/WilsonFermion.cc
#	lib/qcd/action/fermion/WilsonFermion.h
#	lib/qcd/utils/SUn.h
#	lib/simd/Grid_avx.h
#	lib/simd/Intel512common.h
2016-10-19 18:35:18 +01:00
azusayamaguchi
8b0d171c9a 32bit issue on the KNL code variant where byte offsets were stored 2016-10-12 17:49:32 +01:00
paboyle
9353b6edfe Fenv out of grid namespace 2016-09-26 10:09:13 +01:00
paboyle
167cc2650e GNU SOURCE problem on travis 2016-09-26 09:58:09 +01:00
paboyle
296396646d FPE's on macos set up 2016-09-26 09:36:14 +01:00
paboyle
0744f38866 Demangle support is useful 2016-08-31 00:23:28 +01:00
paboyle
ff6da364e8 FFT double and single precision gives good performance now in multithreaded code. 2016-08-24 15:05:00 +01:00
Guido Cossu
fdfbf11c6d Merge branch 'develop' into temporary-smearing 2016-07-04 18:45:10 +01:00
Guido Cossu
9cb90f714e Merge remote-tracking branch 'origin/develop' into temporary-smearing 2016-07-04 17:28:40 +01:00
paboyle
fc4a043663 Colors and banner clean up 2016-07-02 16:15:38 +01:00
Guido Cossu
565e9329ba Changed the colouring classes 2016-06-30 16:51:03 +01:00
paboyle
139cc5f1ae Large change with KNL preparation 2016-06-03 03:24:26 -07:00
4bc21ec7cb thread CL argument fix 2016-05-11 15:21:29 +01:00
e99ce0875f directly exit when using '--help' option 2016-05-01 16:05:16 -07:00
paboyle
60d965f79e AVX512 improvements; sigfpe trapping too 2016-03-30 08:42:34 +01:00
1eb169ac0b compatibility fix 2016-02-23 16:36:50 +00:00
Antonin Portelli
497e7e4c53 BG/Q compatibility fix 2016-02-23 15:57:38 +00:00
Peter Boyle
2cfa20cc4e Improving the logging, got fed up with color so optionally disable.
Backtrace macro used everwhere
2016-02-21 07:58:53 -06:00
Peter Boyle
41c2b09184 Shmem comms [NO MPI] target added. The dwf test runs and passes.
Not really shaken out to my satisfaction though as I want more tests done, so don't declare as working.
But committing my current while I try a few experimentals.
2016-02-14 14:24:38 -06:00
paboyle
02452afd36 Optional overlap of comms with compute 2016-01-04 14:18:40 +00:00
paboyle
331768dcff Added overlap comms compute mode 2016-01-03 01:38:11 +00:00
paboyle
4aac345bea Updated logging to colour code according to message type 2016-01-02 17:21:14 +00:00
paboyle
15c0022042 GPLv2 clarified, and copyright message and banner in Init function.
Color is just showing off....
2016-01-02 15:22:30 +00:00
paboyle
aae8bf31a7 Global edit adding copyright and license info to every source file. 2016-01-02 14:51:32 +00:00
Azusa Yamaguchi
78c4e862ef Plaq, Rectangle, Iwasaki, Symanzik and DBW2 workign and HMC regresses to http://arxiv.org/pdf/hep-lat/0610075.pdf 2015-12-28 16:38:31 +00:00
Peter Boyle
825875fd48 compile fixes 2015-11-29 00:24:25 +00:00
paboyle
899ca41cb8 Merge branch 'master' of github.com:paboyle/Grid
Conflicts:
	lib/qcd/action/fermion/WilsonFermion5D.cc
2015-11-06 03:50:04 -08:00
paboyle
64770d9052 Threading changes for many core and asm calls 2015-11-06 03:46:21 -08:00
Azusa Yamaguchi
3281745fde Exec info and linux check to stop non-portable code breaking 2015-11-06 10:31:24 +00:00
paboyle
63a2993827 Exec info an cache blocking 2015-11-04 03:16:56 -08:00
Peter Boyle
64d64d1ab6 Updating to modify non-inlining permute routines and hopefully get better reg use and
enhance performance.
2015-09-25 08:55:04 -07:00
Peter Boyle
dc814f30da Binary IO file for generic Grid array parallel I/O.
Number of IO MPI tasks can be varied by selecting which
dimensions use parallel IO and which dimensions use Serial send to boss
I/O.

Thus can neck down from, say 1024 nodes = 4x4x8x8 to {1,8,32,64,128,256,1024} nodes
doing the I/O.

Interpolates nicely between ALL nodes write their data, a single boss per time-plane
in processor space [old UKQCD fortran code did this], and a single node doing all I/O.

Not sure I have the transfer sizes big enough and am not overly convinced fstream
is guaranteed to not give buffer inconsistencies unless I set streambuf size to zero.

Practically it has worked on 8 tasks, 2x1x2x2 writing /cloning NERSC configurations
on my MacOS + OpenMPI and Clang environment.

It is VERY easy to switch to pwrite at a later date, and also easy to send x-strips around from
each node in order to gather bigger chunks at the syscall level.

That would push us up to the circa 8x 18*4*8 == 4KB size write chunk, and by taking, say, x/y non
parallel we get to 16MB contiguous chunks written in multi 4KB transactions
per IOnode in 64^3 lattices for configuration I/O.

I suspect this is fine for system performance.
2015-08-26 13:40:29 +01:00
Peter Boyle
84a66476ab Rework/global edit to enforce type templating of fermion operators.
Allows multi-precision work and paves the way for alternate BC's and such like
allowing for example G-parity which is important for K pipi programme.
In particular, can drive an extra flavour index into the fermion fields
using template types.
2015-08-10 20:47:44 +01:00
Peter Boyle
4cc2ef84d3 Committing incomplete work for parameter file I/O.
MacroMagic.h is central. Guido and I plan to move
over to generating virtual (XML, JSON, YAML, text, binary) encoding
from macro based system.
2015-07-27 18:32:28 +09:00