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211 Commits

Author SHA1 Message Date
Guido Cossu
977b0a6dd9 Merge branch 'develop' into feature/hmc_generalise 2016-10-20 17:04:41 +01:00
Antonin Portelli
cb02b7088f Merge branch 'develop' into feature/doxygen 
# Conflicts:
#	configure.ac
 2016-10-09 13:35:44 +01:00
Guido Cossu
2e453dfbf5 Added some instrumentation to benchmark the force computation 2016-10-06 17:52:45 +01:00
Guido Cossu
c065e454c3 Adding Binrary IO, untested 2016-10-06 10:12:11 +01:00
Antonin Portelli
b1cfb4d661 first try at a nicer Doxygen implementation 2016-08-05 15:29:18 +01:00
Antonin Portelli
e9f30cab2c first working version for the new build system 2016-07-30 17:53:18 +01:00
paboyle
f4dd5062d7 Merge branch 'develop' of https://github.com/paboyle/Grid into develop 2016-07-15 19:26:06 +01:00
paboyle
a0676beeb1 Open up dependency on Eigen and FFTW 2016-07-07 22:31:07 +01:00
Christopher Kelly
c5106d0c03 Bugfix 2016-07-07 16:06:30 -04:00
Christopher Kelly
25fafa9a89 Comment 2016-07-06 16:19:41 -04:00
Christopher Kelly
85ed8175cb Implemented mixed precision CG. Fixed filelist to exclude lib/Old directory and include Config.h. 2016-07-06 15:57:04 -04:00
Christopher Kelly
15f22425c8 Added option to prevent CG from exiting when it fails to converge 2016-07-06 14:50:01 -04:00
Guido Cossu
5e02392f9c Fixed compilation error for benchmark_dwf 
Some parts were assuming floating point precision
 2016-06-20 12:30:51 +01:00
Antonin Portelli
fa59789580 ConjugateGradient: cleaner output 2016-05-01 18:29:20 -07:00
Antonin Portelli
92c2c7d3b5 SchurRedBlackDiagMooeeSolve: fix: guess was not initialised from input 2016-05-01 16:07:55 -07:00
paboyle
c79ea0dcef Fixingn IMCI 2016-04-22 21:52:54 -07:00
Christopher Kelly
af9c8d1372 -Checkerboard fixes for Lanczos 2016-04-06 13:50:56 -04:00
paboyle
340428a1fe Eigen fixes and HDCR work 2016-03-30 00:16:02 -07:00
azusa
f54e0ec9bd Try lanczos to set up hdcr subspace 2016-03-17 10:36:16 +00:00
paboyle
3920b2c0ab HDCR updates 2016-03-16 02:29:58 -07:00
paboyle
2733c4b93c hdcr updates 2016-03-16 02:29:37 -07:00
paboyle
090e7aa930 Merge remote-tracking branch 'origin/chulwoo-dec12-2015' 
Merge Chulwoo's Lanczos related improvements.
Merge Nd!=4 fixes for pure gauge HMC from Evan.
 2016-03-08 09:55:14 +00:00
paboyle
2dce9c3cff HDCR running on 16^3 with 2x-3x speed up. 2016-03-08 01:01:50 -08:00
paboyle
dc72293398 More timing info 2016-03-06 10:46:55 -08:00
paboyle
ff129d9ad9 Redundant operations removed 2016-03-02 07:02:37 -08:00
Jung
9f0d9ade68 Added configure flag for LAPACK. Tested ImplicitlyRestartedLanczos::calc() 
Checking in before cleaning up
 2016-02-20 02:50:32 -05:00
Peter Boyle
c9fadf97a5 Simplify the compressor interface again. 2016-02-17 18:16:45 -06:00
Jung
bd84c23298 definitions reconciled. 2016-01-25 16:30:59 -05:00
Jung
411ac49dd7 GparityWilsonTM typedef added. Not yet tested 
Conflicts:
	configure
	lib/qcd/action/fermion/WilsonKernels.h
 2016-01-25 01:36:28 -05:00
Jung
b8fb05a422 Addtional routines for Lanczos (SYM2, Chebyshef).. 2016-01-25 01:26:25 -05:00
Jung
5c57d4f403 Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2 
Conflicts:
	lib/qcd/action/fermion/WilsonKernels.h
 2016-01-11 11:36:45 -05:00
paboyle
d19321dfde Overlap comms compute changes 2016-01-10 19:20:16 +00:00
Jung
5924e5a562 Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2 
Conflicts:
	configure
	lib/qcd/action/Actions.h
	lib/qcd/action/fermion/WilsonKernels.h
 2016-01-06 03:44:57 -05:00
paboyle
aae8bf31a7 Global edit adding copyright and license info to every source file. 2016-01-02 14:51:32 +00:00
paboyle
841a37f941 Fix to WilsonCompressor that fixes a bug in comms phase due to the sign change on gamma 
matrix in hopping term.
Add logging of time spent in CG.
 2015-12-29 23:49:41 +00:00
paboyle
08edbb5cbe HMC bit repro across checkpoints. Fixed parallel RNG issue with threading. 
Conclusion: c++11 distributions not thread safe and must us distinct dist as well as distinct engine
per site. Makes sense when you think of box muller. Also added a reset of dist on fill to ensure
repro across checkpoints.
 2015-12-22 08:54:40 +00:00
paboyle
8c9010d0f4 Isnan check on guess and convergence assert on result 2015-12-21 15:29:46 +00:00
Jung
fb81acca3c Merge branch 'master' of https://github.com/paboyle/Grid 2015-12-03 12:11:10 -05:00
paboyle
93356fd246 No compile fixes on gcc/Cray 2015-11-29 03:14:44 -08:00
paboyle
ca42fe6d32 Merge branch 'master' of github.com:paboyle/Grid 
Merge done
Conflicts:
	lib/serialisation/XmlIO.h
	tests/Test_stencil.cc
 2015-11-28 17:03:43 -08:00
paboyle
d875c2bd39 More verbose useful 2015-11-28 16:54:19 -08:00
paboyle
cc32ba615a Verbose changes 2015-11-28 16:53:54 -08:00
Peter Boyle
11cf0f08f3 This file is not yet debugged. 2015-11-29 00:32:45 +00:00
Peter Boyle
5d854c869c Stencil interface changes 2015-11-06 05:22:33 -06:00
Peter Boyle
3b7576ad53 Switch off for now 2015-11-04 05:13:29 -06:00
Peter Boyle
83afb2e26a Poly support for lanczos 2015-10-09 00:43:21 +02:00
Peter Boyle
2d95dac6b6 Lanczos untested/partially tested additions. In middle of shake out but at least compiles 2015-10-09 00:40:25 +02:00
Peter Boyle
5ef42add2d Changes to remove warnings under icc; disambiguate AVX512 from IMCI correctly 
and drop swizzles in AVX512. Don't know why these compiled.
 2015-09-23 05:23:45 -07:00
Peter Boyle
2f38ebc446 Reintroducing the hand unrolled loops 2015-09-08 17:45:30 +01:00
Peter Boyle
fc160eeccc Added one flavour rational ratios (unprec) 2015-08-19 04:58:40 +01:00
Peter Boyle
a842a6c94d One flavour rational unprec added; untested but does compile. 
Moving param structs into a single header for later connection to file I/O using
macromagic.h
 2015-08-18 14:40:08 +01:00
Peter Boyle
7d3512ab21 Gparity valence test now working. 
Interface in FermionOperator will change a lot in future
 2015-08-14 00:01:04 +01:00
Peter Boyle
69ce87fbe4 Preconditioned conjugate residual 2015-08-11 06:24:53 +01:00
Peter Boyle
a01aa156b9 Adding components for even odd decomposed determinant in HMC. 
dH not yet conserved, so something wrong in the eo force code still
 2015-08-07 08:37:15 +01:00
Peter Boyle
1d67d29183 Jackson smoothed chebyshev and (untested) completion of force terms 
for Cayley, Partial and Cont fraction dwf and overlap.
have even odd and unprec forces.
 2015-08-01 05:58:35 +09:00
Peter Boyle
4fe110bd07 Two flavour HMC for Wilson/Wilson is conserving energy. 
Still to check plaq and <e(-dH)>, but nevertheless this is
progress
 2015-07-29 17:53:39 +09:00
Peter Boyle
4cc2ef84d3 Committing incomplete work for parameter file I/O. 
MacroMagic.h is central. Guido and I plan to move
over to generating virtual (XML, JSON, YAML, text, binary) encoding
from macro based system.
 2015-07-27 18:32:28 +09:00
Peter Boyle
1d70a45d84 Merge branch 'master' of https://github.com/paboyle/Grid 2015-07-24 01:33:19 +09:00
Peter Boyle
d1afebf71e Sizable improvement in multigrid for unsquared. 
6000 matmuls CG unprec
2000 matmuls CG prec (4000 eo muls)
1050 matmuls PGCR on 16^3 x 32 x 8 m=.01

Substantial effort on timing and logging infrastructure
 2015-07-24 01:31:13 +09:00
paboyle
f62f1699cb Bug work around 2015-07-21 22:49:36 -07:00
Peter Boyle
4e94ddad46 Merge 2015-07-21 13:56:22 +09:00
Peter Boyle
5ac625f716 No changes shown on git diff 2015-07-21 13:54:09 +09:00
Peter Boyle
0007669381 Printing change 2015-07-21 13:51:56 +09:00
Peter Boyle
a700933611 More info 2015-07-21 13:48:57 +09:00
Peter Boyle
c515d069cd Tweaks to subspace set up to put in g5 r5 hermiticity 2015-07-21 12:13:03 +09:00
Peter Boyle
8a7b7f1e2b verbose 2015-07-21 12:12:29 +09:00
paboyle
e3456bf559 Temporarily disable gmp dependency simply because Cray XC30's I'm benchmarking 
have a downlevel gmp version that chokes on ::max_align_t where gmp had a
bug as far as I recall.
 2015-07-01 22:47:33 +01:00
Peter Boyle
03ca506a3d Big commit fixing nocompiles in defective C++11 compilers (gcc, icpc). stared getting to 
near the bleeding edge I guess
 2015-06-30 15:17:27 +01:00
Peter Boyle
8eaf657f95 VPGCR updates 2015-06-30 15:02:27 +01:00
Peter Boyle
a17684ebe2 Some small steps towards a multigrid 2015-06-22 12:49:44 +01:00
Azusa Yamaguchi
fd1a8abcd1 Abstract preconditioner 2015-06-21 11:03:55 +01:00
Azusa Yamaguchi
3b4118f33e Variable preconditioned GCR with restarting. 
Orthogonalisation depth and restart frequency is controllable via constructor
 2015-06-21 10:58:46 +01:00
Peter Boyle
960f29c0b1 Will start this as a two level algorithm 2015-06-20 22:24:21 +01:00
Peter Boyle
fb07ee5781 HDCG but this is not complete and placeholder for later completion 2015-06-20 22:23:57 +01:00
Peter Boyle
b4a6dbfa65 Patches for beginnings of an overlap multigrid 2015-06-20 22:22:56 +01:00
Jung
ee9ecb6115 Fixing missing max_align_t error 2015-06-19 00:56:24 -04:00
Azusa Yamaguchi
250cb00c42 WHere should always have precisely matching types in ET system 2015-06-14 01:07:58 +01:00
Peter Boyle
0784bbc4bf Remove extra layers of checks now it works 2015-06-09 22:43:41 +01:00
Peter Boyle
6fb36c8a51 Starting to use 2015-06-09 22:38:13 +01:00
Peter Boyle
2e6986892a Debugged finally. A silly mistake in permute cost me a day of debug. 2015-06-09 22:37:21 +01:00
Peter Boyle
a73a1c1bc1 Merge branch 'master' of https://github.com/paboyle/Grid 
Conflicts:
	lib/Make.inc
 2015-06-09 10:27:10 +01:00
Peter Boyle
1e5b015ee3 Some unary ops and coarse grid support 2015-06-09 10:26:19 +01:00
neo
48bf4878c1 Experimental support for ARM 2015-06-09 15:46:21 +09:00
Peter Boyle
3111f50f2f Merge branch 'master' of https://github.com/paboyle/Grid 
Conflicts:
	lib/Make.inc
	tests/Make.inc
	tests/Test_remez.cc
 2015-06-08 12:08:09 +01:00
Peter Boyle
d6f1ddf99c Conjugate residual algorithm; some more unary functions 2015-06-08 12:04:59 +01:00
Peter Boyle
5a3bc5250e Prep for multigrid 2015-06-08 12:02:53 +01:00
Azusa Yamaguchi
8688ff8b3a multishift conjugate gradient added and a strong test: take a diagonal 
but non-identity matrix
l1 0  0  0 ....
0  l2 0  0 ....
0  0  l3 0 ...
.  .   .
.  .   .
.  .   .

And apply the multishift CG to it. Sum the poles and residues.
Insist that this be the same as the exactly taken square root
where l1,l2,l3 >= 0.
 2015-06-08 11:52:44 +01:00
Peter Boyle
1a05882d7c Conjugate residual added 2015-06-05 18:16:25 +01:00
Peter Boyle
7f6304fac3 Rework the linop support to get different forms of red black schur solver 
Moo on diag, or MooInv Moe MeeInv Meo
 2015-06-05 10:17:10 +01:00
Azusa Yamaguchi
58a4f32298 merge to the head 2015-06-05 10:15:31 +01:00
Peter Boyle
b1b412f63c comment improvement 2015-06-05 05:31:27 +01:00
Peter Boyle
63a61fcc2a PartialFraction Hw with Zolo and Tanh approx converged under CG and passed EO breakdown 
and hermiticity tests.
 2015-06-04 13:28:37 +01:00
Peter Boyle
3845f267cb Domain wall fermions now invert ; have the basis set up for 
Tanh/Zolo * (Cayley/PartFrac/ContFrac) * (Mobius/Shamir/Wilson)
Approx        Representation               Kernel.

All are done with space-time taking part in checkerboarding, Ls uncheckerboarded

Have only so far tested the Domain Wall limit of mobius, and at that only checked
that it
i)  Inverts
ii) 5dim DW == Ls copies of 4dim D2
iii) MeeInv Mee == 1
iv) Meo+Mee+Moe+Moo == M unprec.
v) MpcDagMpc is hermitan
vi) Mdag is the adjoint of M between stochastic vectors.

That said, the RB schur solve, RB MpcDagMpc solve, Unprec solve
all converge and the true residual becomes small; so pretty good tests.
 2015-06-02 16:57:12 +01:00
Peter Boyle
5644ab1e19 Large scale change to support 5d fermion formulations. 
Have 5d replicated wilson with 4d gauge working and matrix regressing
to Ls copies of wilson.
 2015-05-31 15:09:02 +01:00
Peter Boyle
624c0ac3ef Updates now schur red black solver working 2015-05-25 13:43:58 +01:00
Peter Boyle
ac99832d21 Herm op 2015-05-25 13:42:36 +01:00
Peter Boyle
d0d41b8bce Didn't like a print statement 2015-05-21 06:36:15 +01:00
Peter Boyle
221902a882 Merging in 
Merge branch 'master' of https://github.com/paboyle/Grid
 2015-05-19 21:30:13 +01:00
Peter Boyle
a21036e69a Reworking to keep intel compiler happy 2015-05-19 21:29:07 +01:00
Peter Boyle
fde7f8d6b9 Merged 
Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master

Conflicts:
	lib/simd/Grid_vector_types.h
 2015-05-19 15:05:07 +01:00
Peter Boyle
4dba8522a1 Got unpreconditioned conjugate gradient to run and converge on a random (uniform random, 
not even SU(3) for now) gauge field. Convergence history is correctly indepdendent of decomposition
on 1,2,4,8,16 mpi tasks.
Found a couple of simd bugs which required fixed and enhanced the Grid_simd.cc test suite.
Implemented the Mdag, M, MdagM, Meooe Mooee schur type stuff in the wilson dop.
 2015-05-19 13:57:35 +01:00
neo
74e91cd925 Partial implementation of the vector types SIMD 
Implementing SSE4 now
A systematic series of tests must be written.
 2015-05-19 17:21:17 +09:00
neo
baa382f055 Added check of mpfr and gmp at configure time 
It generates automatically the linker flags or complains if not found.
 2015-05-19 13:54:55 +09:00
Peter Boyle
05f1419df4 Merge branch 'master' of https://github.com/coppolachan/Grid into coppolachan-master 
Conflicts:
	lib/algorithms/approx/bigfloat.h
 2015-05-18 16:34:21 +01:00
Peter Boyle
17835c6f42 Remez tested 2015-05-18 12:09:25 +01:00
neo
99aecf1f2e Minor modification to the configure.ac 
Enables silent rules (use make V=1 to override)
Prints a summary after configure is completed
 2015-05-18 17:15:14 +09:00
neo
b4cd37276b Corrected some compilation errors (zolotarev.h) and SSE4 vsplat and conj to make cshift test pass. 2015-05-18 16:48:14 +09:00
Peter Boyle
11cb3e9a01 Getting closer to having a wilson solver... introducing a first and untested 
cut at Conjugate gradient. Also copied in Remez, Zolotarev, Chebyshev from
Mike Clark, Tony Kennedy and my BFM package respectively since we know we will
need these. I wanted the structure of

algorithms/approx
algorithms/iterative

etc.. to start taking shape.
 2015-05-18 07:47:05 +01:00
Peter Boyle
7992346190 Working towards solvers 2015-05-17 00:19:03 +01:00
Peter Boyle
bf7ab0da7a Updating preparing for solvers etc.. 2015-05-16 23:35:08 +01:00
Peter Boyle
f1255197c2 Linear op added 2015-05-13 11:25:34 +01:00