Fix for the CI

.gitignore

@@ -123,7 +123,6 @@ make-bin-BUCK.sh
 #####################
 lib/qcd/spin/gamma-gen/*.h
 lib/qcd/spin/gamma-gen/*.cc
-lib/version.h
 
 # vs code editor files #
 ########################

.travis.yml

@@ -19,8 +19,6 @@ before_install:
     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc; fi
     
 install:
-    - export CWD=`pwd`
-    - echo $CWD
     - export CC=$CC$VERSION
     - export CXX=$CXX$VERSION
     - echo $PATH
@@ -38,22 +36,11 @@ script:
     - ./bootstrap.sh
     - mkdir build
     - cd build
-    - mkdir lime
-    - cd lime
-    - mkdir build
-    - cd build
-    - wget http://usqcd-software.github.io/downloads/c-lime/lime-1.3.2.tar.gz
-    - tar xf lime-1.3.2.tar.gz
-    - cd lime-1.3.2
-    - ./configure --prefix=$CWD/build/lime/install
-    - make -j4
-    - make install
-    - cd $CWD/build
-    - ../configure --enable-precision=single --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install
+    - ../configure --enable-precision=single --enable-simd=SSE4 --enable-comms=none
     - make -j4 
     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
     - echo make clean
-    - ../configure --enable-precision=double --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install
+    - ../configure --enable-precision=double --enable-simd=SSE4 --enable-comms=none
     - make -j4
     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
     - make check

Makefile.am

@@ -5,10 +5,6 @@ include $(top_srcdir)/doxygen.inc
 
 bin_SCRIPTS=grid-config
 
-BUILT_SOURCES = version.h
-
-version.h:
-	echo "`git log -n 1 --format=format:"#define GITHASH \\"%H:%d\\"%n" HEAD`" > $(srcdir)/lib/version.h
 
 .PHONY: bench check tests doxygen-run doxygen-doc $(DX_PS_GOAL) $(DX_PDF_GOAL)
 

README.md

@@ -187,11 +187,10 @@ Alternatively, some CPU codenames can be directly used:
 | `<code>`    | Description                            |
 | ----------- | -------------------------------------- |
 | `KNL`       | [Intel Xeon Phi codename Knights Landing](http://ark.intel.com/products/codename/48999/Knights-Landing) |
-| `SKL`       | [Intel Skylake with AVX512 extensions](https://ark.intel.com/products/codename/37572/Skylake#@server) |
 | `BGQ`       | Blue Gene/Q                            |
 
 #### Notes:
-- We currently support AVX512 for the Intel compiler and GCC (KNL and SKL target). Support for clang will appear in future versions of Grid when the AVX512 support in the compiler will be more advanced.
+- We currently support AVX512 only for the Intel compiler. Support for GCC and clang will appear in future versions of Grid when the AVX512 support within GCC and clang will be more advanced.
 - For BG/Q only [bgclang](http://trac.alcf.anl.gov/projects/llvm-bgq) is supported. We do not presently plan to support more compilers for this platform.
 - BG/Q performances are currently rather poor. This is being investigated for future versions.
 - The vector size for the `GEN` target can be specified with the `configure` script option `--enable-gen-simd-width`.

VERSION

@@ -1,4 +1,4 @@
-Version : 0.8.0
+Version : 0.7.0
 
 - Clang 3.5 and above, ICPC v16 and above, GCC 6.3 and above recommended
 - MPI and MPI3 comms optimisations for KNL and OPA finished

benchmarks/Benchmark_IO.cc

@@ -1,108 +0,0 @@
-#include <Grid/Grid.h>
-#ifdef HAVE_LIME
-
-using namespace std;
-using namespace Grid;
-using namespace Grid::QCD;
-
-#define MSG cout << GridLogMessage
-#define SEP \
-"============================================================================="
-#ifndef BENCH_IO_LMAX
-#define BENCH_IO_LMAX 40
-#endif
-
-typedef function<void(const string, LatticeFermion &)> WriterFn;
-typedef function<void(LatticeFermion &, const string)> ReaderFn;
-
-string filestem(const int l)
-{
-  return "iobench_l" + to_string(l);
-}
-
-void limeWrite(const string filestem, LatticeFermion &vec)
-{
-  emptyUserRecord record;
-  ScidacWriter    binWriter(vec._grid->IsBoss());
-
-  binWriter.open(filestem + ".bin");
-  binWriter.writeScidacFieldRecord(vec, record);
-  binWriter.close();
-}
-
-void limeRead(LatticeFermion &vec, const string filestem)
-{
-  emptyUserRecord record;
-  ScidacReader    binReader;
-
-  binReader.open(filestem + ".bin");
-  binReader.readScidacFieldRecord(vec, record);
-  binReader.close();
-}
-
-void writeBenchmark(const int l, const WriterFn &write)
-{
-  auto                      mpi  = GridDefaultMpi();
-  auto                      simd = GridDefaultSimd(Nd, vComplex::Nsimd());
-  vector<int>               latt = {l*mpi[0], l*mpi[1], l*mpi[2], l*mpi[3]};
-  unique_ptr<GridCartesian> gPt(SpaceTimeGrid::makeFourDimGrid(latt, simd, mpi));
-  GridCartesian             *g = gPt.get();
-  GridParallelRNG           rng(g);
-  LatticeFermion            vec(g);
-  emptyUserRecord           record;
-  ScidacWriter              binWriter(g->IsBoss());
-
-  cout << "-- Local volume " << l << "^4" << endl;
-  random(rng, vec);
-  write(filestem(l), vec);
-}
-
-void readBenchmark(const int l, const ReaderFn &read)
-{
-  auto                      mpi  = GridDefaultMpi();
-  auto                      simd = GridDefaultSimd(Nd, vComplex::Nsimd());
-  vector<int>               latt = {l*mpi[0], l*mpi[1], l*mpi[2], l*mpi[3]};
-  unique_ptr<GridCartesian> gPt(SpaceTimeGrid::makeFourDimGrid(latt, simd, mpi));
-  GridCartesian             *g = gPt.get();
-  LatticeFermion            vec(g);
-  emptyUserRecord           record;
-  ScidacReader              binReader;
-
-  cout << "-- Local volume " << l << "^4" << endl;
-  read(vec, filestem(l));
-}
-
-int main (int argc, char ** argv)
-{
-  Grid_init(&argc,&argv);
-
-  auto simd = GridDefaultSimd(Nd,vComplex::Nsimd());
-  auto mpi  = GridDefaultMpi();
-
-  int64_t threads = GridThread::GetThreads();
-  MSG << "Grid is setup to use " << threads << " threads" << endl;
-  MSG << SEP << endl;
-  MSG << "Benchmark Lime write" << endl;
-  MSG << SEP << endl;
-  for (int l = 4; l <= BENCH_IO_LMAX; l += 2)
-  {
-    writeBenchmark(l, limeWrite);
-  }
-
-  MSG << "Benchmark Lime read" << endl;
-  MSG << SEP << endl;
-  for (int l = 4; l <= BENCH_IO_LMAX; l += 2)
-  {
-    readBenchmark(l, limeRead);
-  }
-
-  Grid_finalize();
-
-  return EXIT_SUCCESS;
-}
-#else
-int main (int argc, char ** argv)
-{
-  return EXIT_SUCCESS;
-}
-#endif

benchmarks/Benchmark_ITT.cc

@@ -158,10 +158,8 @@ public:
 
 	  dbytes=0;
 	  ncomm=0;
-#ifdef GRID_OMP
-#pragma omp parallel for num_threads(Grid::CartesianCommunicator::nCommThreads)
-#endif
-	  for(int dir=0;dir<8;dir++){
+
+	  parallel_for(int dir=0;dir<8;dir++){
 
 	    double tbytes;
 	    int mu =dir % 4;
@@ -177,14 +175,9 @@ public:
 		int comm_proc = mpi_layout[mu]-1;
 		Grid.ShiftedRanks(mu,comm_proc,xmit_to_rank,recv_from_rank);
 	      }
-#ifdef GRID_OMP
-	int tid = omp_get_thread_num(); 
-#else 
-        int tid = dir;
-#endif
 	      tbytes= Grid.StencilSendToRecvFrom((void *)&xbuf[dir][0], xmit_to_rank,
 						 (void *)&rbuf[dir][0], recv_from_rank,
-						 bytes,tid);
+						 bytes,dir);
 	  
 #ifdef GRID_OMP
 #pragma omp atomic

benchmarks/Benchmark_comms.cc

@@ -169,11 +169,7 @@ int main (int argc, char ** argv)
   for(int lat=4;lat<=maxlat;lat+=4){
     for(int Ls=8;Ls<=8;Ls*=2){
 
-      std::vector<int> latt_size  ({lat*mpi_layout[0],
-                                    lat*mpi_layout[1],
-                                    lat*mpi_layout[2],
-                                    lat*mpi_layout[3]});
-
+      std::vector<int> latt_size  ({lat,lat,lat,lat});
 
       GridCartesian     Grid(latt_size,simd_layout,mpi_layout);
       RealD Nrank = Grid._Nprocessors;
@@ -450,7 +446,7 @@ int main (int argc, char ** argv)
   }    
 
 
-#ifdef GRID_OMP
+
   std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
   std::cout<<GridLogMessage << "= Benchmarking threaded STENCIL halo exchange in "<<nmu<<" dimensions"<<std::endl;
   std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
@@ -489,8 +485,7 @@ int main (int argc, char ** argv)
 	dbytes=0;
 	ncomm=0;
 
-#pragma omp parallel for num_threads(Grid::CartesianCommunicator::nCommThreads)
-	for(int dir=0;dir<8;dir++){
+	parallel_for(int dir=0;dir<8;dir++){
 
 	  double tbytes;
 	  int mu =dir % 4;
@@ -507,9 +502,9 @@ int main (int argc, char ** argv)
 	      int comm_proc = mpi_layout[mu]-1;
 	      Grid.ShiftedRanks(mu,comm_proc,xmit_to_rank,recv_from_rank);
 	    }
-            int tid = omp_get_thread_num();
+
 	    tbytes= Grid.StencilSendToRecvFrom((void *)&xbuf[dir][0], xmit_to_rank,
-					       (void *)&rbuf[dir][0], recv_from_rank, bytes,tid);
+					       (void *)&rbuf[dir][0], recv_from_rank, bytes,dir);
 
 #pragma omp atomic
 	    dbytes+=tbytes;
@@ -537,7 +532,7 @@ int main (int argc, char ** argv)
  
     }
   }    
-#endif
+
   std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
   std::cout<<GridLogMessage << "= All done; Bye Bye"<<std::endl;
   std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;

benchmarks/Benchmark_dwf.cc

@@ -48,6 +48,7 @@ int main (int argc, char ** argv)
 
 
   int threads = GridThread::GetThreads();
+  std::cout<<GridLogMessage << "Grid is setup to use "<<threads<<" threads"<<std::endl;
 
   std::vector<int> latt4 = GridDefaultLatt();
   int Ls=16;
@@ -56,10 +57,6 @@ int main (int argc, char ** argv)
       std::stringstream ss(argv[i+1]); ss >> Ls;
     }
 
-  GridLogLayout();
-
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
-
 
   GridCartesian         * UGrid   = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(), GridDefaultSimd(Nd,vComplex::Nsimd()),GridDefaultMpi());
   GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
@@ -190,7 +187,7 @@ int main (int argc, char ** argv)
     FGrid->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=single_site_flops*volume*ncall;
+    double flops=1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called Dw "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     //    std::cout<<GridLogMessage << "norm result "<< norm2(result)<<std::endl;
@@ -229,7 +226,7 @@ int main (int argc, char ** argv)
     FGrid->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=single_site_flops*volume*ncall;
+    double flops=1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called half prec comms Dw "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;
@@ -280,7 +277,7 @@ int main (int argc, char ** argv)
     double t1=usecond();
     FGrid->Barrier();
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=single_site_flops*volume*ncall;
+    double flops=1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called Dw s_inner "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;
@@ -358,7 +355,7 @@ int main (int argc, char ** argv)
       //      sDw.stat.print();
 
       double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-      double flops=(single_site_flops*volume*ncall)/2.0;
+      double flops=(1344.0*volume*ncall)/2;
 
       std::cout<<GridLogMessage << "sDeo mflop/s =   "<< flops/(t1-t0)<<std::endl;
       std::cout<<GridLogMessage << "sDeo mflop/s per rank   "<< flops/(t1-t0)/NP<<std::endl;
@@ -481,7 +478,7 @@ int main (int argc, char ** argv)
     FGrid->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=(single_site_flops*volume*ncall)/2.0;
+    double flops=(1344.0*volume*ncall)/2;
 
     std::cout<<GridLogMessage << "Deo mflop/s =   "<< flops/(t1-t0)<<std::endl;
     std::cout<<GridLogMessage << "Deo mflop/s per rank   "<< flops/(t1-t0)/NP<<std::endl;

benchmarks/Benchmark_dwf_sweep.cc

@@ -51,7 +51,6 @@ int main (int argc, char ** argv)
 {
   Grid_init(&argc,&argv);
 
-
   std::cout << GridLogMessage<< "*****************************************************************" <<std::endl;
   std::cout << GridLogMessage<< "* Kernel options --dslash-generic, --dslash-unroll, --dslash-asm" <<std::endl;
   std::cout << GridLogMessage<< "*****************************************************************" <<std::endl;
@@ -108,7 +107,6 @@ void benchDw(std::vector<int> & latt4, int Ls, int threads,int report )
   GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
   GridCartesian         * FGrid   = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
   GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
 
   std::vector<int> seeds4({1,2,3,4});
   std::vector<int> seeds5({5,6,7,8});
@@ -198,7 +196,7 @@ void benchDw(std::vector<int> & latt4, int Ls, int threads,int report )
   
   if ( ! report ) {
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=single_site_flops*volume*ncall;
+    double flops=1344*volume*ncall;
     std::cout <<"\t"<<NP<< "\t"<<flops/(t1-t0)<< "\t";
   }
   
@@ -230,7 +228,7 @@ void benchDw(std::vector<int> & latt4, int Ls, int threads,int report )
     
     if(!report){
       double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-      double flops=(single_site_flops*volume*ncall)/2.0;
+      double flops=(1344.0*volume*ncall)/2;
       std::cout<< flops/(t1-t0);
     }
   }
@@ -239,7 +237,6 @@ void benchDw(std::vector<int> & latt4, int Ls, int threads,int report )
 #define CHECK_SDW
 void benchsDw(std::vector<int> & latt4, int Ls, int threads, int report )
 {
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
 
   GridCartesian         * UGrid   = SpaceTimeGrid::makeFourDimGrid(latt4, GridDefaultSimd(Nd,vComplex::Nsimd()),GridDefaultMpi());
   GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
@@ -324,7 +321,7 @@ void benchsDw(std::vector<int> & latt4, int Ls, int threads, int report )
     Counter.Report();
   } else { 
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=single_site_flops*volume*ncall;
+    double flops=1344*volume*ncall;
     std::cout<<"\t"<< flops/(t1-t0);
   }
 
@@ -361,7 +358,7 @@ void benchsDw(std::vector<int> & latt4, int Ls, int threads, int report )
     CounterSdw.Report();
   } else {
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=(single_site_flops*volume*ncall)/2.0;
+    double flops=(1344.0*volume*ncall)/2;
     std::cout<<"\t"<< flops/(t1-t0);
   }
 }

benchmarks/Benchmark_gparity.cc

@@ -107,7 +107,7 @@ int main (int argc, char ** argv)
     FGrid->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=2*1320*volume*ncall;
+    double flops=2*1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called Dw "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     //    std::cout<<GridLogMessage << "norm result "<< norm2(result)<<std::endl;
@@ -134,7 +134,7 @@ int main (int argc, char ** argv)
     FGrid->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=2*1320*volume*ncall;
+    double flops=2*1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called half prec comms Dw "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;
@@ -174,7 +174,7 @@ int main (int argc, char ** argv)
     FGrid_d->Barrier();
     
     double volume=Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt4[mu];
-    double flops=2*1320*volume*ncall;
+    double flops=2*1344*volume*ncall;
 
     std::cout<<GridLogMessage << "Called Dw "<<ncall<<" times in "<<t1-t0<<" us"<<std::endl;
     //    std::cout<<GridLogMessage << "norm result "<< norm2(result)<<std::endl;

benchmarks/Benchmark_memory_bandwidth.cc

@@ -55,7 +55,7 @@ int main (int argc, char ** argv)
   std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
   std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s"<<"\t\t"<<"Gflop/s"<<"\t\t seconds"<<std::endl;
   std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
-  uint64_t lmax=64;
+  uint64_t lmax=96;
 #define NLOOP (10*lmax*lmax*lmax*lmax/vol)
   for(int lat=8;lat<=lmax;lat+=8){
 

benchmarks/Benchmark_meson_field.cc

@@ -1,803 +0,0 @@
-    /*************************************************************************************
-
-    Grid physics library, www.github.com/paboyle/Grid 
-
-    Source file: ./benchmarks/Benchmark_wilson.cc
-
-    Copyright (C) 2018
-
-Author: Peter Boyle <paboyle@ph.ed.ac.uk>
-Author: paboyle <paboyle@ph.ed.ac.uk>
-
-    This program is free software; you can redistribute it and/or modify
-    it under the terms of the GNU General Public License as published by
-    the Free Software Foundation; either version 2 of the License, or
-    (at your option) any later version.
-
-    This program is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU General Public License for more details.
-
-    You should have received a copy of the GNU General Public License along
-    with this program; if not, write to the Free Software Foundation, Inc.,
-    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-    See the full license in the file "LICENSE" in the top level distribution directory
-    *************************************************************************************/
-    /*  END LEGAL */
-#include <Grid/Grid.h>
-
-using namespace std;
-using namespace Grid;
-using namespace Grid::QCD;
-
-
-#include "Grid/util/Profiling.h"
-
-template<class vobj>
-void sliceInnerProductMesonField(std::vector< std::vector<ComplexD> > &mat, 
-				 const std::vector<Lattice<vobj> > &lhs,
-				 const std::vector<Lattice<vobj> > &rhs,
-				 int orthogdim) 
-{
-  typedef typename vobj::scalar_object sobj;
-  typedef typename vobj::scalar_type scalar_type;
-  typedef typename vobj::vector_type vector_type;
-  
-  int Lblock = lhs.size();
-  int Rblock = rhs.size();
-
-  GridBase *grid = lhs[0]._grid;
-  
-  const int    Nd = grid->_ndimension;
-  const int Nsimd = grid->Nsimd();
-  int Nt     = grid->GlobalDimensions()[orthogdim];
-
-  assert(mat.size()==Lblock*Rblock);
-  for(int t=0;t<mat.size();t++){
-    assert(mat[t].size()==Nt);
-  }
-
-  int fd=grid->_fdimensions[orthogdim];
-  int ld=grid->_ldimensions[orthogdim];
-  int rd=grid->_rdimensions[orthogdim];
-
-  // will locally sum vectors first
-  // sum across these down to scalars
-  // splitting the SIMD
-  std::vector<vector_type,alignedAllocator<vector_type> > lvSum(rd*Lblock*Rblock);
-  parallel_for (int r = 0; r < rd * Lblock * Rblock; r++){
-    lvSum[r] = zero;
-  }
-
-  std::vector<scalar_type > lsSum(ld*Lblock*Rblock,scalar_type(0.0));             
-
-  int e1=    grid->_slice_nblock[orthogdim];
-  int e2=    grid->_slice_block [orthogdim];
-  int stride=grid->_slice_stride[orthogdim];
-  
-  std::cout << GridLogMessage << " Entering first parallel loop "<<std::endl;
-  // Parallelise over t-direction doesn't expose as much parallelism as needed for KNL
-  parallel_for(int r=0;r<rd;r++){
-
-    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
-
-    for(int n=0;n<e1;n++){
-      for(int b=0;b<e2;b++){
-	int ss= so+n*stride+b;
-	for(int i=0;i<Lblock;i++){
-	  auto left = conjugate(lhs[i]._odata[ss]);
-	  for(int j=0;j<Rblock;j++){
-	    int idx = i+Lblock*j+Lblock*Rblock*r;
-	    auto right = rhs[j]._odata[ss];
-	    vector_type vv = left()(0)(0) * right()(0)(0)
-	      +              left()(0)(1) * right()(0)(1)
-	      +              left()(0)(2) * right()(0)(2)
-              +              left()(1)(0) * right()(1)(0)
-	      +              left()(1)(1) * right()(1)(1)
-	      +              left()(1)(2) * right()(1)(2)
-              +              left()(2)(0) * right()(2)(0)
-	      +              left()(2)(1) * right()(2)(1)
-	      +              left()(2)(2) * right()(2)(2)
-              +              left()(3)(0) * right()(3)(0)
-	      +              left()(3)(1) * right()(3)(1)
-	      +              left()(3)(2) * right()(3)(2);
-	    lvSum[idx]=lvSum[idx]+vv;
-	  }
-	}
-      }
-    }
-  }
-
-  std::cout << GridLogMessage << " Entering second parallel loop "<<std::endl;
-  // Sum across simd lanes in the plane, breaking out orthog dir.
-  parallel_for(int rt=0;rt<rd;rt++){
-
-    std::vector<int> icoor(Nd);
-
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-
-      iScalar<vector_type> temp; 
-      std::vector<iScalar<scalar_type> > extracted(Nsimd);               
-
-      temp._internal = lvSum[i+Lblock*j+Lblock*Rblock*rt];
-
-      extract(temp,extracted);
-
-      for(int idx=0;idx<Nsimd;idx++){
-
-	grid->iCoorFromIindex(icoor,idx);
-
-	int ldx =rt+icoor[orthogdim]*rd;
-      
-	int ij_dx = i+Lblock*j+Lblock*Rblock*ldx;
-	lsSum[ij_dx]=lsSum[ij_dx]+extracted[idx]._internal;
-
-      }
-    }}
-  }
-
-  std::cout << GridLogMessage << " Entering non parallel loop "<<std::endl;
-  for(int t=0;t<fd;t++)
-  {
-    int pt = t / ld; // processor plane
-    int lt = t % ld;
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-      if (pt == grid->_processor_coor[orthogdim]){
-        int ij_dx = i + Lblock * j + Lblock * Rblock * lt;
-        mat[i+j*Lblock][t] = lsSum[ij_dx];
-      }
-      else{
-        mat[i+j*Lblock][t] = scalar_type(0.0);
-      }
-    }}
-  }
-  std::cout << GridLogMessage << " Done "<<std::endl;
-  // defer sum over nodes.
-  return;
-}
-
-template<class vobj>
-void sliceInnerProductMesonFieldGamma(std::vector< std::vector<ComplexD> > &mat, 
-				      const std::vector<Lattice<vobj> > &lhs,
-				      const std::vector<Lattice<vobj> > &rhs,
-				      int orthogdim,
-				      std::vector<Gamma::Algebra> gammas) 
-{
-  typedef typename vobj::scalar_object sobj;
-  typedef typename vobj::scalar_type scalar_type;
-  typedef typename vobj::vector_type vector_type;
-  
-  int Lblock = lhs.size();
-  int Rblock = rhs.size();
-
-  GridBase *grid = lhs[0]._grid;
-  
-  const int    Nd = grid->_ndimension;
-  const int Nsimd = grid->Nsimd();
-  int Nt     = grid->GlobalDimensions()[orthogdim];
-  int Ngamma = gammas.size();
-
-  assert(mat.size()==Lblock*Rblock*Ngamma);
-  for(int t=0;t<mat.size();t++){
-    assert(mat[t].size()==Nt);
-  }
-
-  int fd=grid->_fdimensions[orthogdim];
-  int ld=grid->_ldimensions[orthogdim];
-  int rd=grid->_rdimensions[orthogdim];
-
-  // will locally sum vectors first
-  // sum across these down to scalars
-  // splitting the SIMD
-  int MFrvol = rd*Lblock*Rblock*Ngamma;
-  int MFlvol = ld*Lblock*Rblock*Ngamma;
-
-  std::vector<vector_type,alignedAllocator<vector_type> > lvSum(MFrvol);
-  parallel_for (int r = 0; r < MFrvol; r++){
-    lvSum[r] = zero;
-  }
-
-  std::vector<scalar_type > lsSum(MFlvol);             
-  parallel_for (int r = 0; r < MFlvol; r++){
-    lsSum[r]=scalar_type(0.0);
-  }
-
-  int e1=    grid->_slice_nblock[orthogdim];
-  int e2=    grid->_slice_block [orthogdim];
-  int stride=grid->_slice_stride[orthogdim];
-  
-  std::cout << GridLogMessage << " Entering first parallel loop "<<std::endl;
-
-  // Parallelise over t-direction doesn't expose as much parallelism as needed for KNL
-  parallel_for(int r=0;r<rd;r++){
-
-    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
-
-    for(int n=0;n<e1;n++){
-      for(int b=0;b<e2;b++){
-	int ss= so+n*stride+b;
-	for(int i=0;i<Lblock;i++){
-	    auto left = conjugate(lhs[i]._odata[ss]);
-	    for(int j=0;j<Rblock;j++){
-	  for(int mu=0;mu<Ngamma;mu++){
-
-        auto right = Gamma(gammas[mu])*rhs[j]._odata[ss];
-
-	      vector_type vv = left()(0)(0) * right()(0)(0)
-		+              left()(0)(1) * right()(0)(1)
-		+              left()(0)(2) * right()(0)(2)
-		+              left()(1)(0) * right()(1)(0)
-		+              left()(1)(1) * right()(1)(1)
-		+              left()(1)(2) * right()(1)(2)
-		+              left()(2)(0) * right()(2)(0)
-		+              left()(2)(1) * right()(2)(1)
-		+              left()(2)(2) * right()(2)(2)
-		+              left()(3)(0) * right()(3)(0)
-		+              left()(3)(1) * right()(3)(1)
-		+              left()(3)(2) * right()(3)(2);
-
-	      int idx = mu+i*Ngamma+Lblock*Ngamma*j+Ngamma*Lblock*Rblock*r;
-
-	      lvSum[idx]=lvSum[idx]+vv;
-	    }
-	  }
-	}
-      }
-    }
-  }
-
-  std::cout << GridLogMessage << " Entering second parallel loop "<<std::endl;
-  // Sum across simd lanes in the plane, breaking out orthog dir.
-  parallel_for(int rt=0;rt<rd;rt++){
-
-    iScalar<vector_type> temp; 
-    std::vector<int> icoor(Nd);
-    std::vector<iScalar<scalar_type> > extracted(Nsimd);               
-
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-    for(int mu=0;mu<Ngamma;mu++){
-
-      int ij_rdx = mu+i*Ngamma+Ngamma*Lblock*j+Ngamma*Lblock*Rblock*rt;
-      temp._internal = lvSum[ij_rdx];
-
-      extract(temp,extracted);
-
-      for(int idx=0;idx<Nsimd;idx++){
-
-	grid->iCoorFromIindex(icoor,idx);
-
-	int ldx =rt+icoor[orthogdim]*rd;
-      
-	int ij_ldx = mu+i*Ngamma+Ngamma*Lblock*j+Ngamma*Lblock*Rblock*ldx;
-	lsSum[ij_ldx]=lsSum[ij_ldx]+extracted[idx]._internal;
-
-      }
-    }}}
-  }
-
-  std::cout << GridLogMessage << " Entering non parallel loop "<<std::endl;
-  for(int t=0;t<fd;t++)
-  {
-    int pt = t / ld; // processor plane
-    int lt = t % ld;
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-    for(int mu=0;mu<Ngamma;mu++){
-      if (pt == grid->_processor_coor[orthogdim]){
-        int ij_dx = mu+i*Ngamma+Ngamma*Lblock*j+Ngamma*Lblock*Rblock* lt;
-        mat[mu+i*Ngamma+j*Lblock*Ngamma][t] = lsSum[ij_dx];
-      }
-      else{
-        mat[mu+i*Ngamma+j*Lblock*Ngamma][t] = scalar_type(0.0);
-      }
-    }}}
-  }
-  std::cout << GridLogMessage << " Done "<<std::endl;
-  // defer sum over nodes.
-  return;
-}
-
-
-template<class vobj>
-void sliceInnerProductMesonFieldGamma1(std::vector< std::vector<ComplexD> > &mat, 
-				      const std::vector<Lattice<vobj> > &lhs,
-				      const std::vector<Lattice<vobj> > &rhs,
-				      int orthogdim,
-				      std::vector<Gamma::Algebra> gammas) 
-{
-
-  typedef typename vobj::scalar_object sobj;
-  typedef typename vobj::scalar_type scalar_type;
-  typedef typename vobj::vector_type vector_type;
-  typedef iSpinMatrix<vector_type> SpinMatrix_v;
-  typedef iSpinMatrix<scalar_type> SpinMatrix_s;
-  
-  int Lblock = lhs.size();
-  int Rblock = rhs.size();
-
-  GridBase *grid = lhs[0]._grid;
-  
-  const int    Nd = grid->_ndimension;
-  const int Nsimd = grid->Nsimd();
-  int Nt     = grid->GlobalDimensions()[orthogdim];
-  int Ngamma = gammas.size();
-
-  assert(mat.size()==Lblock*Rblock*Ngamma);
-  for(int t=0;t<mat.size();t++){
-    assert(mat[t].size()==Nt);
-  }
-
-  int fd=grid->_fdimensions[orthogdim];
-  int ld=grid->_ldimensions[orthogdim];
-  int rd=grid->_rdimensions[orthogdim];
-
-  // will locally sum vectors first
-  // sum across these down to scalars
-  // splitting the SIMD
-  int MFrvol = rd*Lblock*Rblock;
-  int MFlvol = ld*Lblock*Rblock;
-
-  Vector<SpinMatrix_v > lvSum(MFrvol);
-  parallel_for (int r = 0; r < MFrvol; r++){
-    lvSum[r] = zero;
-  }
-
-  Vector<SpinMatrix_s > lsSum(MFlvol);             
-  parallel_for (int r = 0; r < MFlvol; r++){
-    lsSum[r]=scalar_type(0.0);
-  }
-
-  int e1=    grid->_slice_nblock[orthogdim];
-  int e2=    grid->_slice_block [orthogdim];
-  int stride=grid->_slice_stride[orthogdim];
-  
-  std::cout << GridLogMessage << " Entering first parallel loop "<<std::endl;
-
-  // Parallelise over t-direction doesn't expose as much parallelism as needed for KNL
-  parallel_for(int r=0;r<rd;r++){
-
-    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
-
-    for(int n=0;n<e1;n++){
-      for(int b=0;b<e2;b++){
-	int ss= so+n*stride+b;
-	for(int i=0;i<Lblock;i++){
-
-	  auto left = conjugate(lhs[i]._odata[ss]);
-	  for(int j=0;j<Rblock;j++){
-
-	    SpinMatrix_v vv;
-	    auto right = rhs[j]._odata[ss];
-	    for(int s1=0;s1<Ns;s1++){
-	    for(int s2=0;s2<Ns;s2++){
-	     vv()(s2,s1)() = left()(s1)(0) * right()(s2)(0)
-		+             left()(s1)(1) * right()(s2)(1)
-		+             left()(s1)(2) * right()(s2)(2);
-	    }}
-
-	    int idx = i+Lblock*j+Lblock*Rblock*r;
-
-	    lvSum[idx]=lvSum[idx]+vv;
-	  
-	  }
-	  }
-	}
-      }
-    }
-
-  std::cout << GridLogMessage << " Entering second parallel loop "<<std::endl;
-  // Sum across simd lanes in the plane, breaking out orthog dir.
-  parallel_for(int rt=0;rt<rd;rt++){
-
-    std::vector<int> icoor(Nd);
-    std::vector<SpinMatrix_s> extracted(Nsimd);               
-
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-
-      int ij_rdx = i+Lblock*j+Lblock*Rblock*rt;
-
-      extract(lvSum[ij_rdx],extracted);
-
-      for(int idx=0;idx<Nsimd;idx++){
-
-	grid->iCoorFromIindex(icoor,idx);
-
-	int ldx    = rt+icoor[orthogdim]*rd;
-
-	int ij_ldx = i+Lblock*j+Lblock*Rblock*ldx;
-
-	lsSum[ij_ldx]=lsSum[ij_ldx]+extracted[idx];
-
-      }
-    }}
-  }
-
-  std::cout << GridLogMessage << " Entering third parallel loop "<<std::endl;
-  parallel_for(int t=0;t<fd;t++)
-  {
-    int pt = t / ld; // processor plane
-    int lt = t % ld;
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-      if (pt == grid->_processor_coor[orthogdim]){
-        int ij_dx = i + Lblock * j + Lblock * Rblock * lt;
-    	for(int mu=0;mu<Ngamma;mu++){
-	  mat[mu+i*Ngamma+j*Lblock*Ngamma][t] = trace(lsSum[ij_dx]*Gamma(gammas[mu]));
-	}
-      }
-      else{
-        for(int mu=0;mu<Ngamma;mu++){
-	  mat[mu+i*Ngamma+j*Lblock*Ngamma][t] = scalar_type(0.0);
-	}
-      }
-    }}
-  }
-  std::cout << GridLogMessage << " Done "<<std::endl;
-  // defer sum over nodes.
-  return;
-}
-
-template<class vobj>
-void sliceInnerProductMesonFieldGammaMom(std::vector< std::vector<ComplexD> > &mat, 
-					 const std::vector<Lattice<vobj> > &lhs,
-					 const std::vector<Lattice<vobj> > &rhs,
-					 int orthogdim,
-					 std::vector<Gamma::Algebra> gammas,
-					 const std::vector<LatticeComplex > &mom) 
-{
-  typedef typename vobj::scalar_object sobj;
-  typedef typename vobj::scalar_type scalar_type;
-  typedef typename vobj::vector_type vector_type;
-  typedef iSpinMatrix<vector_type> SpinMatrix_v;
-  typedef iSpinMatrix<scalar_type> SpinMatrix_s;
-  
-  int Lblock = lhs.size();
-  int Rblock = rhs.size();
-
-  GridBase *grid = lhs[0]._grid;
-  
-  const int    Nd = grid->_ndimension;
-  const int Nsimd = grid->Nsimd();
-  int Nt     = grid->GlobalDimensions()[orthogdim];
-  int Ngamma = gammas.size();
-  int Nmom   = mom.size();
-
-  assert(mat.size()==Lblock*Rblock*Ngamma*Nmom);
-  for(int t=0;t<mat.size();t++){
-    assert(mat[t].size()==Nt);
-  }
-
-  int fd=grid->_fdimensions[orthogdim];
-  int ld=grid->_ldimensions[orthogdim];
-  int rd=grid->_rdimensions[orthogdim];
-
-  // will locally sum vectors first
-  // sum across these down to scalars
-  // splitting the SIMD
-  int MFrvol = rd*Lblock*Rblock*Nmom;
-  int MFlvol = ld*Lblock*Rblock*Nmom;
-
-  Vector<SpinMatrix_v > lvSum(MFrvol);
-  parallel_for (int r = 0; r < MFrvol; r++){
-    lvSum[r] = zero;
-  }
-
-  Vector<SpinMatrix_s > lsSum(MFlvol);             
-  parallel_for (int r = 0; r < MFlvol; r++){
-    lsSum[r]=scalar_type(0.0);
-  }
-
-  int e1=    grid->_slice_nblock[orthogdim];
-  int e2=    grid->_slice_block [orthogdim];
-  int stride=grid->_slice_stride[orthogdim];
-  
-  std::cout << GridLogMessage << " Entering first parallel loop "<<std::endl;
-
-  // Parallelise over t-direction doesn't expose as much parallelism as needed for KNL
-  parallel_for(int r=0;r<rd;r++){
-
-    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
-
-    for(int n=0;n<e1;n++){
-      for(int b=0;b<e2;b++){
-	int ss= so+n*stride+b;
-
-
-	for(int i=0;i<Lblock;i++){
-
-	  auto left = conjugate(lhs[i]._odata[ss]);
-	  for(int j=0;j<Rblock;j++){
-
-	    SpinMatrix_v vv;
-	    auto right = rhs[j]._odata[ss];
-	    for(int s1=0;s1<Ns;s1++){
-	    for(int s2=0;s2<Ns;s2++){
-	      vv()(s1,s2)() = left()(s1)(0) * right()(s2)(0)
-		+             left()(s1)(1) * right()(s2)(1)
-		+             left()(s1)(2) * right()(s2)(2);
-	    }}
-	    
-	    // After getting the sitewise product do the mom phase loop
-	    int base = Nmom*i+Nmom*Lblock*j+Nmom*Lblock*Rblock*r;
-	    // Trigger unroll
-	    for ( int m=0;m<Nmom;m++){
-	      int idx = m+base;
-	      auto phase = mom[m]._odata[ss];
-	      mac(&lvSum[idx],&vv,&phase);
-	    }
-	  
-	  }
-	}
-      }
-    }
-  }
-
-  std::cout << GridLogMessage << " Entering second parallel loop "<<std::endl;
-  // Sum across simd lanes in the plane, breaking out orthog dir.
-  parallel_for(int rt=0;rt<rd;rt++){
-
-    std::vector<int> icoor(Nd);
-    std::vector<SpinMatrix_s> extracted(Nsimd);               
-
-
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-    for(int m=0;m<Nmom;m++){
-
-      int ij_rdx = m+Nmom*i+Nmom*Lblock*j+Nmom*Lblock*Rblock*rt;
-
-      extract(lvSum[ij_rdx],extracted);
-
-      for(int idx=0;idx<Nsimd;idx++){
-
-	grid->iCoorFromIindex(icoor,idx);
-
-	int ldx    = rt+icoor[orthogdim]*rd;
-
-	int ij_ldx = m+Nmom*i+Nmom*Lblock*j+Nmom*Lblock*Rblock*ldx;
-
-	lsSum[ij_ldx]=lsSum[ij_ldx]+extracted[idx];
-
-      }
-    }}}
-  }
-
-  std::cout << GridLogMessage << " Entering third parallel loop "<<std::endl;
-  parallel_for(int t=0;t<fd;t++)
-  {
-    int pt = t / ld; // processor plane
-    int lt = t % ld;
-    for(int i=0;i<Lblock;i++){
-    for(int j=0;j<Rblock;j++){
-      if (pt == grid->_processor_coor[orthogdim]){
-	for(int m=0;m<Nmom;m++){
-	  int ij_dx = m+Nmom*i + Nmom*Lblock * j + Nmom*Lblock * Rblock * lt;
-	  for(int mu=0;mu<Ngamma;mu++){
-	    mat[ mu
-		+m*Ngamma
-		+i*Nmom*Ngamma
-		+j*Nmom*Ngamma*Lblock][t] = trace(lsSum[ij_dx]*Gamma(gammas[mu]));
-	  }
-	}
-      }
-      else{
-	for(int mu=0;mu<Ngamma;mu++){
-	for(int m=0;m<Nmom;m++){
-	  mat[mu+m*Ngamma+i*Nmom*Ngamma+j*Nmom*Lblock*Ngamma][t] = scalar_type(0.0);
-	}}
-      }
-    }}
-  }
-  std::cout << GridLogMessage << " Done "<<std::endl;
-  // defer sum over nodes.
-  return;
-}
-
-
-
-/*
-template void sliceInnerProductMesonField<SpinColourVector>(std::vector< std::vector<ComplexD> > &mat, 
-						   const std::vector<Lattice<SpinColourVector> > &lhs,
-						   const std::vector<Lattice<SpinColourVector> > &rhs,
-						   int orthogdim) ;
-*/
-
-std::vector<Gamma::Algebra> Gmu4 ( {
-  Gamma::Algebra::GammaX,
-  Gamma::Algebra::GammaY,
-  Gamma::Algebra::GammaZ,
-  Gamma::Algebra::GammaT });
-
-std::vector<Gamma::Algebra> Gmu16 ( {
-  Gamma::Algebra::Gamma5,
-  Gamma::Algebra::GammaT,
-  Gamma::Algebra::GammaTGamma5,
-  Gamma::Algebra::GammaX,
-  Gamma::Algebra::GammaXGamma5,
-  Gamma::Algebra::GammaY,
-  Gamma::Algebra::GammaYGamma5,
-  Gamma::Algebra::GammaZ,
-  Gamma::Algebra::GammaZGamma5,
-  Gamma::Algebra::Identity,
-  Gamma::Algebra::SigmaXT,
-  Gamma::Algebra::SigmaXY,
-  Gamma::Algebra::SigmaXZ,
-  Gamma::Algebra::SigmaYT,
-  Gamma::Algebra::SigmaYZ,
-  Gamma::Algebra::SigmaZT
-});
-
-int main (int argc, char ** argv)
-{
-  Grid_init(&argc,&argv);
-
-  std::vector<int> latt_size   = GridDefaultLatt();
-  std::vector<int> simd_layout = GridDefaultSimd(Nd,vComplex::Nsimd());
-  std::vector<int> mpi_layout  = GridDefaultMpi();
-  GridCartesian               Grid(latt_size,simd_layout,mpi_layout);
-  
-  const int Nmom=7;
-  int nt = latt_size[Tp];
-  uint64_t vol = 1;
-  for(int d=0;d<Nd;d++){
-    vol = vol*latt_size[d];
-  }
-  
-  std::vector<int> seeds({1,2,3,4});
-  GridParallelRNG          pRNG(&Grid);
-  pRNG.SeedFixedIntegers(seeds);
-
-
-  int Nm = atoi(argv[1]); // number of all modes (high + low)
-
-  std::vector<LatticeFermion> v(Nm,&Grid);
-  std::vector<LatticeFermion> w(Nm,&Grid);
-  std::vector<LatticeFermion> gammaV(Nm,&Grid);
-  std::vector<LatticeComplex> phases(Nmom,&Grid);
-
-  for(int i=0;i<Nm;i++) { 
-    random(pRNG,v[i]);
-    random(pRNG,w[i]);
-  }
-
-  for(int i=0;i<Nmom;i++) { 
-    phases[i] = Complex(1.0);
-  }
-
-  double flops = vol * (11.0 * 8.0 + 6.0) * Nm*Nm;
-  double byte  = vol * (12.0 * sizeof(Complex) ) * Nm*Nm;
-
-  std::vector<ComplexD> ip(nt);
-  std::vector<std::vector<ComplexD> > MesonFields   (Nm*Nm);
-  std::vector<std::vector<ComplexD> > MesonFields4  (Nm*Nm*4);
-  std::vector<std::vector<ComplexD> > MesonFields16 (Nm*Nm*16);
-  std::vector<std::vector<ComplexD> > MesonFields161(Nm*Nm*16);
-  std::vector<std::vector<ComplexD> > MesonFields16mom (Nm*Nm*16*Nmom);
-  std::vector<std::vector<ComplexD> > MesonFieldsRef(Nm*Nm);
-
-  for(int i=0;i<MesonFields.size();i++   )  MesonFields   [i].resize(nt);
-  for(int i=0;i<MesonFieldsRef.size();i++)  MesonFieldsRef[i].resize(nt);
-  for(int i=0;i<MesonFields4.size();i++  )  MesonFields4  [i].resize(nt);
-  for(int i=0;i<MesonFields16.size();i++ )  MesonFields16 [i].resize(nt);
-  for(int i=0;i<MesonFields161.size();i++ ) MesonFields161[i].resize(nt);
-
-  for(int i=0;i<MesonFields16mom.size();i++ ) MesonFields16mom [i].resize(nt);
-
-  GridLogMessage.TimingMode(1);
-
-  std::cout<<GridLogMessage << "Running loop with sliceInnerProductVector"<<std::endl;
-  double t0 = usecond();
-  for(int i=0;i<Nm;i++) { 
-  for(int j=0;j<Nm;j++) { 
-    sliceInnerProductVector(ip, w[i],v[j],Tp);
-    for(int t=0;t<nt;t++){
-      MesonFieldsRef[i+j*Nm][t] = ip[t];
-    }
-  }}
-  double t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-  std::cout<<GridLogMessage << "Running loop with new code for Nt="<<nt<<std::endl;
-  t0 = usecond();
-  sliceInnerProductMesonField(MesonFields,w,v,Tp);
-  t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-
-  std::cout<<GridLogMessage << "Running loop with Four gammas code for Nt="<<nt<<std::endl;
-  flops = vol * (11.0 * 8.0 + 6.0) * Nm*Nm*4;
-  byte  = vol * (12.0 * sizeof(Complex) ) * Nm*Nm
-        + vol * ( 2.0 * sizeof(Complex) ) * Nm*Nm* 4;
-  t0 = usecond();
-  sliceInnerProductMesonFieldGamma(MesonFields4,w,v,Tp,Gmu4);
-  t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-  std::cout<<GridLogMessage << "Running loop with Sixteen gammas code for Nt="<<nt<<std::endl;
-  flops = vol * (11.0 * 8.0 + 6.0) * Nm*Nm*16;
-  byte  = vol * (12.0 * sizeof(Complex) ) * Nm*Nm
-        + vol * ( 2.0 * sizeof(Complex) ) * Nm*Nm* 16;
-  t0 = usecond();
-  sliceInnerProductMesonFieldGamma(MesonFields16,w,v,Tp,Gmu16);
-  t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-
-  std::cout<<GridLogMessage << "Running loop with Sixteen gammas code1 for Nt="<<nt<<std::endl;
-  flops = vol * ( 2 * 8.0 + 6.0) * Nm*Nm*16;
-  byte  = vol * (12.0 * sizeof(Complex) ) * Nm*Nm
-        + vol * ( 2.0 * sizeof(Complex) ) * Nm*Nm* 16;
-  t0 = usecond();
-  sliceInnerProductMesonFieldGamma1(MesonFields161, w, v, Tp, Gmu16);
-  t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-  std::cout<<GridLogMessage << "Running loop with Sixteen gammas "<<Nmom<<" momenta "<<std::endl;
-  flops = vol * ( 2 * 8.0 + 6.0 + 8.0*Nmom) * Nm*Nm*16;
-  byte  = vol * (12.0 * sizeof(Complex) ) * Nm*Nm
-        + vol * ( 2.0 * sizeof(Complex) *Nmom ) * Nm*Nm* 16;
-  t0 = usecond();
-  sliceInnerProductMesonFieldGammaMom(MesonFields16mom,w,v,Tp,Gmu16,phases);
-  t1 = usecond();
-  std::cout<<GridLogMessage << "Done "<< (t1-t0) <<" usecond " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< flops/(t1-t0) <<" mflops " <<std::endl;
-  std::cout<<GridLogMessage << "Done "<< byte /(t1-t0) <<" MB/s " <<std::endl;
-
-
-
-  RealD err = 0;
-  RealD err2 = 0;
-  ComplexD diff;
-  ComplexD diff2;
-
-  for(int i=0;i<Nm;i++) { 
-  for(int j=0;j<Nm;j++) { 
-    for(int t=0;t<nt;t++){
-      diff = MesonFields[i+Nm*j][t] - MesonFieldsRef[i+Nm*j][t];
-      err += real(diff*conj(diff));
-    }
-  }}
-  std::cout<<GridLogMessage << "Norm error "<< err <<std::endl;
-  
-  err = err*0.;
-  diff = diff*0.;
-
-  for (int mu = 0; mu < 16; mu++){
-    for (int k = 0; k < gammaV.size(); k++){
-      gammaV[k] = Gamma(Gmu16[mu]) * v[k];
-    }
-    for (int i = 0; i < Nm; i++){
-      for (int j = 0; j < Nm; j++){
-        sliceInnerProductVector(ip, w[i], gammaV[j], Tp);
-        for (int t = 0; t < nt; t++){
-          MesonFields[i + j * Nm][t] = ip[t];
-          diff = MesonFields16[mu+i*16+Nm*16*j][t] - MesonFields161[mu+i*16+Nm*16*j][t];
-          diff2 = MesonFields[i+j*Nm][t] - MesonFields161[mu+i*16+Nm*16*j][t];
-          err += real(diff*conj(diff));
-          err2 += real(diff2*conj(diff2));
-        }
-      }
-    }
-  }
-  std::cout << GridLogMessage << "Norm error 16 gamma1/16 gamma naive    " << err << std::endl;
-  std::cout << GridLogMessage << "Norm error 16 gamma1/sliceInnerProduct " << err2 << std::endl;
-
-  Grid_finalize();
-}
-

benchmarks/Benchmark_su3.cc

@@ -35,11 +35,9 @@ using namespace Grid::QCD;
 int main (int argc, char ** argv)
 {
   Grid_init(&argc,&argv);
-#define LMAX (32)
-#define LMIN (16)
-#define LINC (4)
+#define LMAX (64)
 
-  int64_t Nloop=2000;
+  int64_t Nloop=20;
 
   std::vector<int> simd_layout = GridDefaultSimd(Nd,vComplex::Nsimd());
   std::vector<int> mpi_layout  = GridDefaultMpi();
@@ -53,7 +51,7 @@ int main (int argc, char ** argv)
   std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
   std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
 
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
+  for(int lat=2;lat<=LMAX;lat+=2){
 
       std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
       int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
@@ -85,7 +83,7 @@ int main (int argc, char ** argv)
   std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
   std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
 
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
+  for(int lat=2;lat<=LMAX;lat+=2){
 
       std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
       int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
@@ -116,7 +114,7 @@ int main (int argc, char ** argv)
   std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
   std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
 
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
+  for(int lat=2;lat<=LMAX;lat+=2){
 
       std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
       int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
@@ -147,7 +145,7 @@ int main (int argc, char ** argv)
   std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
   std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
 
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
+  for(int lat=2;lat<=LMAX;lat+=2){
 
       std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
       int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
@@ -167,87 +165,10 @@ int main (int argc, char ** argv)
       double time = (stop-start)/Nloop*1000.0;
       
       double bytes=3*vol*Nc*Nc*sizeof(Complex);
-    double flops=Nc*Nc*(6+8+8)*vol;
+      double flops=Nc*Nc*(8+8+8)*vol;
       std::cout<<GridLogMessage<<std::setprecision(3) << lat<<"\t\t"<<bytes<<"   \t\t"<<bytes/time<<"\t\t" << flops/time<<std::endl;
 
     }
 
-  std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
-  std::cout<<GridLogMessage << "= Benchmarking SU3xSU3  CovShiftForward(z,x,y)"<<std::endl;
-  std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
-  std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
-  std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
-
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
-
-      std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
-      int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
-
-      GridCartesian     Grid(latt_size,simd_layout,mpi_layout);
-      GridParallelRNG          pRNG(&Grid);      pRNG.SeedFixedIntegers(std::vector<int>({45,12,81,9}));
-
-      LatticeColourMatrix z(&Grid); random(pRNG,z);
-      LatticeColourMatrix x(&Grid); random(pRNG,x);
-      LatticeColourMatrix y(&Grid); random(pRNG,y);
-
-      for(int mu=0;mu<4;mu++){
-	      double start=usecond();
-	      for(int64_t i=0;i<Nloop;i++){
-	        z = PeriodicBC::CovShiftForward(x,mu,y);
-	    }
-	    double stop=usecond();
-	    double time = (stop-start)/Nloop*1000.0;
-	
-	
-	    double bytes=3*vol*Nc*Nc*sizeof(Complex);
-	    double flops=Nc*Nc*(6+8+8)*vol;
-	    std::cout<<GridLogMessage<<std::setprecision(3) << lat<<"\t\t"<<bytes<<"   \t\t"<<bytes/time<<"\t\t" << flops/time<<std::endl;
-      }
-  }
-#if 1
-  std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
-  std::cout<<GridLogMessage << "= Benchmarking SU3xSU3  z= x * Cshift(y)"<<std::endl;
-  std::cout<<GridLogMessage << "===================================================================================================="<<std::endl;
-  std::cout<<GridLogMessage << "  L  "<<"\t\t"<<"bytes"<<"\t\t\t"<<"GB/s\t\t GFlop/s"<<std::endl;
-  std::cout<<GridLogMessage << "----------------------------------------------------------"<<std::endl;
-
-  for(int lat=LMIN;lat<=LMAX;lat+=LINC){
-      std::vector<int> latt_size  ({lat*mpi_layout[0],lat*mpi_layout[1],lat*mpi_layout[2],lat*mpi_layout[3]});
-      int64_t vol = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
-
-      GridCartesian     Grid(latt_size,simd_layout,mpi_layout);
-      GridParallelRNG          pRNG(&Grid);      pRNG.SeedFixedIntegers(std::vector<int>({45,12,81,9}));
-
-      LatticeColourMatrix z(&Grid); random(pRNG,z);
-      LatticeColourMatrix x(&Grid); random(pRNG,x);
-      LatticeColourMatrix y(&Grid); random(pRNG,y);
-      LatticeColourMatrix tmp(&Grid);
-
-      for(int mu=0;mu<4;mu++){
-	double tshift=0;
-	double tmult =0;
-
-	double start=usecond();
-	for(int64_t i=0;i<Nloop;i++){
-	  tshift-=usecond();
-	  tmp = Cshift(y,mu,-1);
-	  tshift+=usecond();
-	  tmult-=usecond();
-	  z   = x*tmp;
-	  tmult+=usecond();
-	}
-	double stop=usecond();
-	double time = (stop-start)/Nloop;
-	tshift = tshift/Nloop;
-	tmult  = tmult /Nloop;
-	
-	double bytes=3*vol*Nc*Nc*sizeof(Complex);
-	double flops=Nc*Nc*(6+8+8)*vol;
-	std::cout<<GridLogMessage<<std::setprecision(3) << "total us "<<time<<" shift "<<tshift <<" mult "<<tmult<<std::endl;
-	time = time * 1000; // convert to NS for GB/s
-	std::cout<<GridLogMessage<<std::setprecision(3) << lat<<"\t\t"<<bytes<<"   \t\t"<<bytes/time<<"\t\t" << flops/time<<std::endl;
-      }
-    }
-#endif
   Grid_finalize();
 }

benchmarks/Benchmark_wilson.cc

@@ -4,7 +4,7 @@
 
     Source file: ./benchmarks/Benchmark_wilson.cc
 
-    Copyright (C) 2018
+    Copyright (C) 2015
 
 Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 Author: paboyle <paboyle@ph.ed.ac.uk>
@@ -32,9 +32,6 @@ using namespace std;
 using namespace Grid;
 using namespace Grid::QCD;
 
-
-#include "Grid/util/Profiling.h"
-
 template<class d>
 struct scal {
   d internal;
@@ -48,7 +45,6 @@ struct scal {
   };
 
 bool overlapComms = false;
-bool perfProfiling = false;
 
 int main (int argc, char ** argv)
 {
@@ -57,12 +53,6 @@ int main (int argc, char ** argv)
   if( GridCmdOptionExists(argv,argv+argc,"--asynch") ){
     overlapComms = true;
   }
-  if( GridCmdOptionExists(argv,argv+argc,"--perf") ){
-    perfProfiling = true;
-  }
-
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
-
 
   std::vector<int> latt_size   = GridDefaultLatt();
   std::vector<int> simd_layout = GridDefaultSimd(Nd,vComplex::Nsimd());
@@ -71,15 +61,10 @@ int main (int argc, char ** argv)
   GridRedBlackCartesian     RBGrid(&Grid);
 
   int threads = GridThread::GetThreads();
-
-  GridLogLayout();
-
+  std::cout<<GridLogMessage << "Grid is setup to use "<<threads<<" threads"<<std::endl;
   std::cout<<GridLogMessage << "Grid floating point word size is REALF"<< sizeof(RealF)<<std::endl;
   std::cout<<GridLogMessage << "Grid floating point word size is REALD"<< sizeof(RealD)<<std::endl;
   std::cout<<GridLogMessage << "Grid floating point word size is REAL"<< sizeof(Real)<<std::endl;
-  std::cout<<GridLogMessage << "Grid number of colours : "<< QCD::Nc <<std::endl;
-  std::cout<<GridLogMessage << "Benchmarking Wilson operator in the fundamental representation" << std::endl;
-
 
   std::vector<int> seeds({1,2,3,4});
   GridParallelRNG          pRNG(&Grid);
@@ -149,25 +134,9 @@ int main (int argc, char ** argv)
     Dw.Dhop(src,result,0);
   }
   double t1=usecond();
-  double flops=single_site_flops*volume*ncall;
-  
-  if (perfProfiling){
-  std::cout<<GridLogMessage << "Profiling Dw with perf"<<std::endl;
-    
-  System::profile("kernel", [&]() {
-    for(int i=0;i<ncall;i++){
-      Dw.Dhop(src,result,0);
-    }
-  });
-
-  std::cout<<GridLogMessage << "Generated kernel.data"<<std::endl;
-  std::cout<<GridLogMessage << "Use with: perf report -i kernel.data"<<std::endl;
-
-  }
-
+  double flops=1344*volume*ncall;
   
   std::cout<<GridLogMessage << "Called Dw"<<std::endl;
-  std::cout<<GridLogMessage << "flops per site " << single_site_flops << std::endl;
   std::cout<<GridLogMessage << "norm result "<< norm2(result)<<std::endl;
   std::cout<<GridLogMessage << "norm ref    "<< norm2(ref)<<std::endl;
   std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;

benchmarks/Benchmark_wilson_sweep.cc

@@ -62,7 +62,6 @@ int main (int argc, char ** argv)
   std::cout << GridLogMessage<< "* Kernel options --dslash-generic, --dslash-unroll, --dslash-asm" <<std::endl;
   std::cout << GridLogMessage<< "*****************************************************************" <<std::endl;
   std::cout << GridLogMessage<< "*****************************************************************" <<std::endl;
-  std::cout << GridLogMessage<< "* Number of colours "<< QCD::Nc <<std::endl;
   std::cout << GridLogMessage<< "* Benchmarking WilsonFermionR::Dhop                  "<<std::endl;
   std::cout << GridLogMessage<< "* Vectorising space-time by "<<vComplex::Nsimd()<<std::endl;
   if ( sizeof(Real)==4 )   std::cout << GridLogMessage<< "* SINGLE precision "<<std::endl;
@@ -70,15 +69,13 @@ int main (int argc, char ** argv)
   if ( WilsonKernelsStatic::Opt == WilsonKernelsStatic::OptGeneric   ) std::cout << GridLogMessage<< "* Using GENERIC Nc WilsonKernels" <<std::endl;
   if ( WilsonKernelsStatic::Opt == WilsonKernelsStatic::OptHandUnroll) std::cout << GridLogMessage<< "* Using Nc=3       WilsonKernels" <<std::endl;
   if ( WilsonKernelsStatic::Opt == WilsonKernelsStatic::OptInlineAsm ) std::cout << GridLogMessage<< "* Using Asm Nc=3   WilsonKernels" <<std::endl;
-  std::cout << GridLogMessage << "* OpenMP threads       : "<< GridThread::GetThreads() <<std::endl;
-  std::cout << GridLogMessage << "* MPI tasks            : "<< GridCmdVectorIntToString(mpi_layout) << std::endl;
   std::cout << GridLogMessage<< "*****************************************************************" <<std::endl;
 
-  std::cout<<GridLogMessage << "================================================================================================="<< std::endl;
-  std::cout<<GridLogMessage << "= Benchmarking Wilson operator in the fundamental representation" << std::endl;
-  std::cout<<GridLogMessage << "================================================================================================="<< std::endl;
-  std::cout<<GridLogMessage << "Volume\t\t\tWilson/MFLOPs\tWilsonDag/MFLOPs\tWilsonEO/MFLOPs\tWilsonDagEO/MFLOPs" << std::endl;
-  std::cout<<GridLogMessage << "================================================================================================="<< std::endl;
+  std::cout<<GridLogMessage << "============================================================================="<< std::endl;
+  std::cout<<GridLogMessage << "= Benchmarking Wilson" << std::endl;
+  std::cout<<GridLogMessage << "============================================================================="<< std::endl;
+  std::cout<<GridLogMessage << "Volume\t\t\tWilson/MFLOPs\tWilsonDag/MFLOPs" << std::endl;
+  std::cout<<GridLogMessage << "============================================================================="<< std::endl;
 
   int Lmax = 32;
   int dmin = 0;
@@ -101,19 +98,12 @@ int main (int argc, char ** argv)
 	  GridParallelRNG  pRNG(&Grid); pRNG.SeedFixedIntegers(seeds);
 	  LatticeGaugeField Umu(&Grid); random(pRNG,Umu);
 	  LatticeFermion    src(&Grid); random(pRNG,src);
-	  LatticeFermion    src_o(&RBGrid); pickCheckerboard(Odd,src_o,src);
 	  LatticeFermion result(&Grid); result=zero;
-	  LatticeFermion result_e(&RBGrid); result_e=zero;
 
 	  double volume = std::accumulate(latt_size.begin(),latt_size.end(),1,std::multiplies<int>());
 
 	  WilsonFermionR Dw(Umu,Grid,RBGrid,mass,params);
       
-    // Full operator      
-	  bench_wilson(src,result,Dw,volume,DaggerNo);
-	  bench_wilson(src,result,Dw,volume,DaggerYes);
-    std::cout << "\t";
-    // EO
 	  bench_wilson(src,result,Dw,volume,DaggerNo);
 	  bench_wilson(src,result,Dw,volume,DaggerYes);
 	  std::cout << std::endl;
@@ -132,26 +122,9 @@ void bench_wilson (
 		   int const           dag )
 {
   int ncall    = 1000;
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
   double t0    = usecond();
   for(int i=0; i<ncall; i++) { Dw.Dhop(src,result,dag); }
   double t1    = usecond();
-  double flops = single_site_flops * volume * ncall;
-  std::cout << flops/(t1-t0) << "\t\t";
-}
-
-void bench_wilson_eo (
-		   LatticeFermion &    src,
-		   LatticeFermion & result,
-		   WilsonFermionR &     Dw,
-		   double const     volume,
-		   int const           dag )
-{
-  int ncall    = 1000;
-  long unsigned int single_site_flops = 8*QCD::Nc*(7+16*QCD::Nc);
-  double t0    = usecond();
-  for(int i=0; i<ncall; i++) { Dw.DhopEO(src,result,dag); }
-  double t1    = usecond();
-  double flops = (single_site_flops * volume * ncall)/2.0;
+  double flops = 1344 * volume * ncall;
   std::cout << flops/(t1-t0) << "\t\t";
 }

bootstrap.sh

@@ -1,6 +1,6 @@
 #!/usr/bin/env bash
 
-EIGEN_URL='http://bitbucket.org/eigen/eigen/get/3.3.5.tar.bz2'
+EIGEN_URL='http://bitbucket.org/eigen/eigen/get/3.3.3.tar.bz2'
 
 echo "-- deploying Eigen source..."
 wget ${EIGEN_URL} --no-check-certificate && ./scripts/update_eigen.sh `basename ${EIGEN_URL}` && rm `basename ${EIGEN_URL}`

configure.ac

@@ -249,9 +249,6 @@ case ${ax_cv_cxx_compiler_vendor} in
       AVX512)
         AC_DEFINE([AVX512],[1],[AVX512 intrinsics])
         SIMD_FLAGS='-mavx512f -mavx512pf -mavx512er -mavx512cd';;
-      SKL)
-        AC_DEFINE([AVX512],[1],[AVX512 intrinsics for SkyLake Xeon])
-        SIMD_FLAGS='-march=skylake-avx512';;
       KNC)
         AC_DEFINE([IMCI],[1],[IMCI intrinsics for Knights Corner])
         SIMD_FLAGS='';;
@@ -340,7 +337,7 @@ case ${ac_PRECISION} in
 esac
 
 ######################  Shared memory allocation technique under MPI3
-AC_ARG_ENABLE([shm],[AC_HELP_STRING([--enable-shm=shmopen|shmget|hugetlbfs|shmnone],
+AC_ARG_ENABLE([shm],[AC_HELP_STRING([--enable-shm=shmopen|hugetlbfs],
               [Select SHM allocation technique])],[ac_SHM=${enable_shm}],[ac_SHM=shmopen])
 
 case ${ac_SHM} in
@@ -349,14 +346,6 @@ case ${ac_SHM} in
      AC_DEFINE([GRID_MPI3_SHMOPEN],[1],[GRID_MPI3_SHMOPEN] )
      ;;
 
-     shmget)
-     AC_DEFINE([GRID_MPI3_SHMGET],[1],[GRID_MPI3_SHMGET] )
-     ;;
-
-     shmnone)
-     AC_DEFINE([GRID_MPI3_SHM_NONE],[1],[GRID_MPI3_SHM_NONE] )
-     ;;
-
      hugetlbfs)
      AC_DEFINE([GRID_MPI3_SHMMMAP],[1],[GRID_MPI3_SHMMMAP] )
      ;;
@@ -370,7 +359,7 @@ esac
 AC_ARG_ENABLE([shmpath],[AC_HELP_STRING([--enable-shmpath=path],
               [Select SHM mmap base path for hugetlbfs])],
 	      [ac_SHMPATH=${enable_shmpath}],
-	      [ac_SHMPATH=/var/lib/hugetlbfs/global/pagesize-2MB/])
+	      [ac_SHMPATH=/var/lib/hugetlbfs/pagesize-2MB/])
 AC_DEFINE_UNQUOTED([GRID_SHM_PATH],["$ac_SHMPATH"],[Path to a hugetlbfs filesystem for MMAPing])
 
 ############### communication type selection
@@ -480,8 +469,8 @@ GRID_LIBS=$LIBS
 GRID_SHORT_SHA=`git rev-parse --short HEAD`
 GRID_SHA=`git rev-parse HEAD`
 GRID_BRANCH=`git rev-parse --abbrev-ref HEAD`
-AM_CXXFLAGS="-I${abs_srcdir}/include -I${abs_srcdir}/Eigen/  -I${abs_srcdir}/Eigen/unsupported $AM_CXXFLAGS"
-AM_CFLAGS="-I${abs_srcdir}/include -I${abs_srcdir}/Eigen/  -I${abs_srcdir}/Eigen/unsupported $AM_CFLAGS"
+AM_CXXFLAGS="-I${abs_srcdir}/include $AM_CXXFLAGS"
+AM_CFLAGS="-I${abs_srcdir}/include $AM_CFLAGS"
 AM_LDFLAGS="-L${cwd}/lib $AM_LDFLAGS"
 AC_SUBST([AM_CFLAGS])
 AC_SUBST([AM_CXXFLAGS])

extras/Hadrons/AllToAllReduction.hpp

@@ -1,146 +0,0 @@
-#ifndef A2A_Reduction_hpp_
-#define A2A_Reduction_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Environment.hpp>
-#include <Grid/Hadrons/Solver.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-////////////////////////////////////////////
-// A2A Meson Field Inner Product
-////////////////////////////////////////////
-
-template <class FermionField>
-void sliceInnerProductMesonField(std::vector<std::vector<ComplexD>> &mat,
-                                 const std::vector<Lattice<FermionField>> &lhs,
-                                 const std::vector<Lattice<FermionField>> &rhs,
-                                 int orthogdim)
-{
-    typedef typename FermionField::scalar_type scalar_type;
-    typedef typename FermionField::vector_type vector_type;
-
-    int Lblock = lhs.size();
-    int Rblock = rhs.size();
-
-    GridBase *grid = lhs[0]._grid;
-
-    const int Nd = grid->_ndimension;
-    const int Nsimd = grid->Nsimd();
-    int Nt = grid->GlobalDimensions()[orthogdim];
-
-    assert(mat.size() == Lblock * Rblock);
-    for (int t = 0; t < mat.size(); t++)
-    {
-        assert(mat[t].size() == Nt);
-    }
-
-    int fd = grid->_fdimensions[orthogdim];
-    int ld = grid->_ldimensions[orthogdim];
-    int rd = grid->_rdimensions[orthogdim];
-
-    // will locally sum vectors first
-    // sum across these down to scalars
-    // splitting the SIMD
-    std::vector<vector_type, alignedAllocator<vector_type>> lvSum(rd * Lblock * Rblock);
-    for(int r=0;r<rd * Lblock * Rblock;r++)
-    {
-        lvSum[r]=zero;
-    }
-    std::vector<scalar_type> lsSum(ld * Lblock * Rblock, scalar_type(0.0));
-
-    int e1 = grid->_slice_nblock[orthogdim];
-    int e2 = grid->_slice_block[orthogdim];
-    int stride = grid->_slice_stride[orthogdim];
-
-    // std::cout << GridLogMessage << " Entering first parallel loop " << std::endl;
-    // Parallelise over t-direction doesn't expose as much parallelism as needed for KNL
-    parallel_for(int r = 0; r < rd; r++)
-    {
-        int so = r * grid->_ostride[orthogdim]; // base offset for start of plane
-        for (int n = 0; n < e1; n++)
-        {
-            for (int b = 0; b < e2; b++)
-            {
-                int ss = so + n * stride + b;
-                for (int i = 0; i < Lblock; i++)
-                {
-                    auto left = conjugate(lhs[i]._odata[ss]);
-                    for (int j = 0; j < Rblock; j++)
-                    {
-                        int idx = i + Lblock * j + Lblock * Rblock * r;
-                        auto right = rhs[j]._odata[ss];
-                        vector_type vv = left()(0)(0) * right()(0)(0) 
-                                       + left()(0)(1) * right()(0)(1) 
-                                       + left()(0)(2) * right()(0)(2) 
-                                       + left()(1)(0) * right()(1)(0) 
-                                       + left()(1)(1) * right()(1)(1) 
-                                       + left()(1)(2) * right()(1)(2) 
-                                       + left()(2)(0) * right()(2)(0) 
-                                       + left()(2)(1) * right()(2)(1) 
-                                       + left()(2)(2) * right()(2)(2) 
-                                       + left()(3)(0) * right()(3)(0) 
-                                       + left()(3)(1) * right()(3)(1) 
-                                       + left()(3)(2) * right()(3)(2);
-
-                        lvSum[idx] = lvSum[idx] + vv;
-                    }
-                }
-            }
-        }
-    }
-
-    // std::cout << GridLogMessage << " Entering second parallel loop " << std::endl;
-    // Sum across simd lanes in the plane, breaking out orthog dir.
-    parallel_for(int rt = 0; rt < rd; rt++)
-    {
-        std::vector<int> icoor(Nd);
-        for (int i = 0; i < Lblock; i++)
-        {
-            for (int j = 0; j < Rblock; j++)
-            {
-                iScalar<vector_type> temp;
-                std::vector<iScalar<scalar_type>> extracted(Nsimd);
-                temp._internal = lvSum[i + Lblock * j + Lblock * Rblock * rt];
-                extract(temp, extracted);
-                for (int idx = 0; idx < Nsimd; idx++)
-                {
-                    grid->iCoorFromIindex(icoor, idx);
-                    int ldx = rt + icoor[orthogdim] * rd;
-                    int ij_dx = i + Lblock * j + Lblock * Rblock * ldx;
-                    lsSum[ij_dx] = lsSum[ij_dx] + extracted[idx]._internal;
-                }
-            }
-        }
-    }
-
-    // std::cout << GridLogMessage << " Entering non parallel loop " << std::endl;
-    for (int t = 0; t < fd; t++)
-    {
-        int pt = t/ld; // processor plane
-        int lt = t%ld;
-        for (int i = 0; i < Lblock; i++)
-        {
-            for (int j = 0; j < Rblock; j++)
-            {
-                if (pt == grid->_processor_coor[orthogdim])
-                {
-                    int ij_dx = i + Lblock * j + Lblock * Rblock * lt;
-                    mat[i + j * Lblock][t] = lsSum[ij_dx];
-                }
-                else
-                {
-                    mat[i + j * Lblock][t] = scalar_type(0.0);
-                }
-                
-            }
-        }
-    }
-    // std::cout << GridLogMessage << " Done " << std::endl;
-    // defer sum over nodes.
-    return;
-}
-
-END_HADRONS_NAMESPACE
-
-#endif // A2A_Reduction_hpp_

extras/Hadrons/AllToAllVectors.hpp

@@ -1,210 +0,0 @@
-#ifndef A2A_Vectors_hpp_
-#define A2A_Vectors_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Environment.hpp>
-#include <Grid/Hadrons/Solver.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-////////////////////////////////
-// A2A Modes
-////////////////////////////////
-
-template <class Field, class Matrix, class Solver>
-class A2AModesSchurDiagTwo
-{
-  private:
-    const std::vector<Field> *evec;
-    const std::vector<RealD> *eval;
-    Matrix &action;
-    Solver &solver;
-    std::vector<Field> w_high_5d, v_high_5d, w_high_4d, v_high_4d;
-    const int Nl, Nh;
-    const bool return_5d;
-
-  public:
-
-  int getNl (void ) {return Nl;}
-  int getNh (void ) {return Nh;}
-  int getN  (void ) {return Nh+Nl;}
-
-    A2AModesSchurDiagTwo(const std::vector<Field> *_evec, const std::vector<RealD> *_eval,
-                         Matrix &_action,
-                         Solver &_solver,
-                         std::vector<Field> _w_high_5d, std::vector<Field> _v_high_5d,
-                         std::vector<Field> _w_high_4d, std::vector<Field> _v_high_4d,
-                         const int _Nl, const int _Nh,
-                         const bool _return_5d)
-                        : evec(_evec), eval(_eval),
-                        action(_action),
-                        solver(_solver),
-                        w_high_5d(_w_high_5d), v_high_5d(_v_high_5d),
-                        w_high_4d(_w_high_4d), v_high_4d(_v_high_4d),
-                        Nl(_Nl), Nh(_Nh),
-                        return_5d(_return_5d){};
-
-    void high_modes(Field &source_5d, Field &w_source_5d, Field &source_4d, int i)
-    {
-        int i5d;
-        LOG(Message) << "A2A high modes for i = " << i << std::endl;
-        i5d = 0;
-        if (return_5d) i5d = i;
-        this->high_mode_v(action, solver, source_5d, v_high_5d[i5d], v_high_4d[i]);
-        this->high_mode_w(w_source_5d, source_4d, w_high_5d[i5d], w_high_4d[i]);
-    }
-
-    void return_v(int i, Field &vout_5d, Field &vout_4d)
-    {
-        if (i < Nl)
-        {
-            this->low_mode_v(action, evec->at(i), eval->at(i), vout_5d, vout_4d);
-        }
-        else
-        {
-            vout_4d = v_high_4d[i - Nl];
-            if (!(return_5d)) i = Nl;
-            vout_5d = v_high_5d[i - Nl];
-        }
-    }
-    void return_w(int i, Field &wout_5d, Field &wout_4d)
-    {
-        if (i < Nl)
-        {
-            this->low_mode_w(action, evec->at(i), eval->at(i), wout_5d, wout_4d);
-        }
-        else
-        {
-            wout_4d = w_high_4d[i - Nl];
-            if (!(return_5d)) i = Nl;
-            wout_5d = w_high_5d[i - Nl];
-        }
-    }
-
-    void low_mode_v(Matrix &action, const Field &evec, const RealD &eval, Field &vout_5d, Field &vout_4d)
-    {
-        GridBase *grid = action.RedBlackGrid();
-        Field src_o(grid);
-        Field sol_e(grid);
-        Field sol_o(grid);
-        Field tmp(grid);
-
-        src_o = evec;
-        src_o.checkerboard = Odd;
-        pickCheckerboard(Even, sol_e, vout_5d);
-        pickCheckerboard(Odd, sol_o, vout_5d);
-
-        /////////////////////////////////////////////////////
-        // v_ie = -(1/eval_i) * MeeInv Meo MooInv evec_i
-        /////////////////////////////////////////////////////
-        action.MooeeInv(src_o, tmp);
-        assert(tmp.checkerboard == Odd);
-        action.Meooe(tmp, sol_e);
-        assert(sol_e.checkerboard == Even);
-        action.MooeeInv(sol_e, tmp);
-        assert(tmp.checkerboard == Even);
-        sol_e = (-1.0 / eval) * tmp;
-        assert(sol_e.checkerboard == Even);
-
-        /////////////////////////////////////////////////////
-        // v_io = (1/eval_i) * MooInv evec_i
-        /////////////////////////////////////////////////////
-        action.MooeeInv(src_o, tmp);
-        assert(tmp.checkerboard == Odd);
-        sol_o = (1.0 / eval) * tmp;
-        assert(sol_o.checkerboard == Odd);
-
-        setCheckerboard(vout_5d, sol_e);
-        assert(sol_e.checkerboard == Even);
-        setCheckerboard(vout_5d, sol_o);
-        assert(sol_o.checkerboard == Odd);
-
-        action.ExportPhysicalFermionSolution(vout_5d, vout_4d);
-    }
-
-    void low_mode_w(Matrix &action, const Field &evec, const RealD &eval, Field &wout_5d, Field &wout_4d)
-    {
-        GridBase *grid = action.RedBlackGrid();
-        SchurDiagTwoOperator<Matrix, Field> _HermOpEO(action);
-
-        Field src_o(grid);
-        Field sol_e(grid);
-        Field sol_o(grid);
-        Field tmp(grid);
-
-        GridBase *fgrid = action.Grid();
-        Field tmp_wout(fgrid);
-
-        src_o = evec;
-        src_o.checkerboard = Odd;
-        pickCheckerboard(Even, sol_e, tmp_wout);
-        pickCheckerboard(Odd, sol_o, tmp_wout);
-
-        /////////////////////////////////////////////////////
-        // w_ie = - MeeInvDag MoeDag Doo evec_i
-        /////////////////////////////////////////////////////
-        _HermOpEO.Mpc(src_o, tmp);
-        assert(tmp.checkerboard == Odd);
-        action.MeooeDag(tmp, sol_e);
-        assert(sol_e.checkerboard == Even);
-        action.MooeeInvDag(sol_e, tmp);
-        assert(tmp.checkerboard == Even);
-        sol_e = (-1.0) * tmp;
-
-        /////////////////////////////////////////////////////
-        // w_io = Doo evec_i
-        /////////////////////////////////////////////////////
-        _HermOpEO.Mpc(src_o, sol_o);
-        assert(sol_o.checkerboard == Odd);
-
-        setCheckerboard(tmp_wout, sol_e);
-        assert(sol_e.checkerboard == Even);
-        setCheckerboard(tmp_wout, sol_o);
-        assert(sol_o.checkerboard == Odd);
-
-        action.DminusDag(tmp_wout, wout_5d);
-
-        action.ExportPhysicalFermionSource(wout_5d, wout_4d);
-    }
-
-    void high_mode_v(Matrix &action, Solver &solver, const Field &source, Field &vout_5d, Field &vout_4d)
-    {
-        GridBase *fgrid = action.Grid();
-        solver(vout_5d, source); // Note: solver is solver(out, in)
-        action.ExportPhysicalFermionSolution(vout_5d, vout_4d);
-    }
-
-    void high_mode_w(const Field &w_source_5d, const Field &source_4d, Field &wout_5d, Field &wout_4d)
-    {
-        wout_5d = w_source_5d;
-        wout_4d = source_4d;
-    }
-};
-
-// TODO: A2A for coarse eigenvectors
-
-// template <class FineField, class CoarseField, class Matrix, class Solver>
-// class A2ALMSchurDiagTwoCoarse : public A2AModesSchurDiagTwo<FineField, Matrix, Solver>
-// {
-//   private:
-//     const std::vector<FineField> &subspace;
-//     const std::vector<CoarseField> &evec_coarse;
-//     const std::vector<RealD> &eval_coarse;
-//     Matrix &action;
-
-//   public:
-//     A2ALMSchurDiagTwoCoarse(const std::vector<FineField> &_subspace, const std::vector<CoarseField> &_evec_coarse, const std::vector<RealD> &_eval_coarse, Matrix &_action)
-//         : subspace(_subspace), evec_coarse(_evec_coarse), eval_coarse(_eval_coarse), action(_action){};
-
-//     void operator()(int i, FineField &vout, FineField &wout)
-//     {
-//         FineField prom_evec(subspace[0]._grid);
-//         blockPromote(evec_coarse[i], prom_evec, subspace);
-//         this->low_mode_v(action, prom_evec, eval_coarse[i], vout);
-//         this->low_mode_w(action, prom_evec, eval_coarse[i], wout);
-//     }
-// };
-
-END_HADRONS_NAMESPACE
-
-#endif // A2A_Vectors_hpp_

extras/Hadrons/Application.cc

@@ -28,7 +28,6 @@ See the full license in the file "LICENSE" in the top level distribution directo
 
 #include <Grid/Hadrons/Application.hpp>
 #include <Grid/Hadrons/GeneticScheduler.hpp>
-#include <Grid/Hadrons/Modules.hpp>
 
 using namespace Grid;
 using namespace QCD;
@@ -41,12 +40,15 @@ using namespace Hadrons;
  *                       Application implementation                           *
  ******************************************************************************/
 // constructors ////////////////////////////////////////////////////////////////
-#define MACOUT(macro)    macro              << " (" << #macro << ")"
-#define MACOUTS(macro) HADRONS_STR(macro) << " (" << #macro << ")"
-
 Application::Application(void)
 {
     initLogger();
+    LOG(Message) << "Modules available:" << std::endl;
+    auto list = ModuleFactory::getInstance().getBuilderList();
+    for (auto &m: list)
+    {
+        LOG(Message) << "  " << m << std::endl;
+    }
     auto dim = GridDefaultLatt(), mpi = GridDefaultMpi(), loc(dim);
     locVol_ = 1;
     for (unsigned int d = 0; d < dim.size(); ++d)
@@ -54,22 +56,9 @@ Application::Application(void)
         loc[d]  /= mpi[d];
         locVol_ *= loc[d];
     }
-    LOG(Message) << "====== HADRONS APPLICATION STARTING ======" << std::endl;
-    LOG(Message) << "** Dimensions" << std::endl;
-    LOG(Message) << "Global lattice       : " << dim << std::endl;
+    LOG(Message) << "Global lattice: " << dim << std::endl;
     LOG(Message) << "MPI partition : " << mpi << std::endl;
     LOG(Message) << "Local lattice : " << loc << std::endl;
-    LOG(Message) << std::endl;
-    LOG(Message) << "** Default parameters (and associated C macro)" << std::endl;
-    LOG(Message) << "ASCII output precision  : " << MACOUT(DEFAULT_ASCII_PREC) << std::endl;
-    LOG(Message) << "Fermion implementation  : " << MACOUTS(FIMPL) << std::endl;
-    LOG(Message) << "z-Fermion implementation: " << MACOUTS(ZFIMPL) << std::endl;
-    LOG(Message) << "Scalar implementation   : " << MACOUTS(SIMPL) << std::endl;
-    LOG(Message) << "Gauge implementation    : " << MACOUTS(GIMPL) << std::endl;
-    LOG(Message) << "Eigenvector base size   : " 
-                 << MACOUT(HADRONS_DEFAULT_LANCZOS_NBASIS) << std::endl;
-    LOG(Message) << "Schur decomposition     : " << MACOUTS(HADRONS_DEFAULT_SCHUR) << std::endl;
-    LOG(Message) << std::endl;
 }
 
 Application::Application(const Application::GlobalPar &par)
@@ -130,12 +119,12 @@ void Application::parseParameterFile(const std::string parameterFileName)
     setPar(par);
     if (!push(reader, "modules"))
     {
-        HADRONS_ERROR(Parsing, "Cannot open node 'modules' in parameter file '" 
+        HADRON_ERROR(Parsing, "Cannot open node 'modules' in parameter file '" 
                               + parameterFileName + "'");
     }
     if (!push(reader, "module"))
     {
-        HADRONS_ERROR(Parsing, "Cannot open node 'modules/module' in parameter file '" 
+        HADRON_ERROR(Parsing, "Cannot open node 'modules/module' in parameter file '" 
                               + parameterFileName + "'");
     }
     do
@@ -149,13 +138,11 @@ void Application::parseParameterFile(const std::string parameterFileName)
 
 void Application::saveParameterFile(const std::string parameterFileName)
 {
-    LOG(Message) << "Saving application to '" << parameterFileName << "'..." << std::endl;
-    if (env().getGrid()->IsBoss())
-    {
     XmlWriter          writer(parameterFileName);
     ObjectId           id;
     const unsigned int nMod = vm().getNModule();
     
+    LOG(Message) << "Saving application to '" << parameterFileName << "'..." << std::endl;
     write(writer, "parameters", getPar());
     push(writer, "modules");
     for (unsigned int i = 0; i < nMod; ++i)
@@ -169,7 +156,6 @@ void Application::saveParameterFile(const std::string parameterFileName)
     }
     pop(writer);
     pop(writer);
-    }
 }
 
 // schedule computation ////////////////////////////////////////////////////////
@@ -184,24 +170,20 @@ void Application::schedule(void)
 
 void Application::saveSchedule(const std::string filename)
 {
-    LOG(Message) << "Saving current schedule to '" << filename << "'..."
-                 << std::endl;
-    if (env().getGrid()->IsBoss())
-    {
     TextWriter               writer(filename);
     std::vector<std::string> program;
     
     if (!scheduled_)
     {
-            HADRONS_ERROR(Definition, "Computation not scheduled");
+        HADRON_ERROR(Definition, "Computation not scheduled");
     }
-
+    LOG(Message) << "Saving current schedule to '" << filename << "'..."
+                 << std::endl;
     for (auto address: program_)
     {
         program.push_back(vm().getModuleName(address));
     }
     write(writer, "schedule", program);
-    }
 }
 
 void Application::loadSchedule(const std::string filename)
@@ -224,7 +206,7 @@ void Application::printSchedule(void)
 {
     if (!scheduled_)
     {
-        HADRONS_ERROR(Definition, "Computation not scheduled");
+        HADRON_ERROR(Definition, "Computation not scheduled");
     }
     auto peak = vm().memoryNeeded(program_);
     LOG(Message) << "Schedule (memory needed: " << sizeString(peak) << "):"

extras/Hadrons/Application.hpp

@@ -31,7 +31,7 @@ See the full license in the file "LICENSE" in the top level distribution directo
 
 #include <Grid/Hadrons/Global.hpp>
 #include <Grid/Hadrons/VirtualMachine.hpp>
-#include <Grid/Hadrons/Module.hpp>
+#include <Grid/Hadrons/Modules.hpp>
 
 BEGIN_HADRONS_NAMESPACE
 

extras/Hadrons/EigenPack.hpp

@@ -1,323 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/EigenPack.hpp
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#ifndef Hadrons_EigenPack_hpp_
-#define Hadrons_EigenPack_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/algorithms/iterative/Deflation.h>
-#include <Grid/algorithms/iterative/LocalCoherenceLanczos.h>
-
-BEGIN_HADRONS_NAMESPACE
-
-// Lanczos type
-#ifndef HADRONS_DEFAULT_LANCZOS_NBASIS
-#define HADRONS_DEFAULT_LANCZOS_NBASIS 60
-#endif
-
-template <typename F>
-class EigenPack
-{
-public:
-    typedef F Field;
-    struct PackRecord
-    {
-        std::string operatorXml, solverXml;
-    };
-    struct VecRecord: Serializable
-    {
-        GRID_SERIALIZABLE_CLASS_MEMBERS(VecRecord,
-                                        unsigned int, index,
-                                        double,       eval);
-        VecRecord(void): index(0), eval(0.) {}
-    };
-public:
-    std::vector<RealD> eval;
-    std::vector<F>     evec;
-    PackRecord         record;
-public:
-    EigenPack(void)          = default;
-    virtual ~EigenPack(void) = default;
-
-    EigenPack(const size_t size, GridBase *grid)
-    {
-        resize(size, grid);
-    }
-
-    void resize(const size_t size, GridBase *grid)
-    {
-        eval.resize(size);
-        evec.resize(size, grid);
-    }
-
-    virtual void read(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < evec.size(); ++k)
-            {
-                basicReadSingle(evec[k], eval[k], evecFilename(fileStem, k, traj), k);
-            }
-        }
-        else
-        {
-            basicRead(evec, eval, evecFilename(fileStem, -1, traj), evec.size());
-        }
-    }
-
-    virtual void write(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < evec.size(); ++k)
-            {
-                basicWriteSingle(evecFilename(fileStem, k, traj), evec[k], eval[k], k);
-            }
-        }
-        else
-        {
-            basicWrite(evecFilename(fileStem, -1, traj), evec, eval, evec.size());
-        }
-    }
-protected:
-    std::string evecFilename(const std::string stem, const int vec, const int traj)
-    {
-        std::string t = (traj < 0) ? "" : ("." + std::to_string(traj));
-
-        if (vec == -1)
-        {
-            return stem + t + ".bin";
-        }
-        else
-        {
-            return stem + t + "/v" + std::to_string(vec) + ".bin";
-        }
-    }
-
-    template <typename T>
-    void basicRead(std::vector<T> &evec, std::vector<double> &eval,
-                   const std::string filename, const unsigned int size)
-    {
-        ScidacReader    binReader;
-
-        binReader.open(filename);
-        binReader.skipPastObjectRecord(SCIDAC_FILE_XML);
-        for(int k = 0; k < size; ++k) 
-        {
-            VecRecord vecRecord;
-
-            LOG(Message) << "Reading eigenvector " << k << std::endl;
-            binReader.readScidacFieldRecord(evec[k], vecRecord);
-            if (vecRecord.index != k)
-            {
-                HADRONS_ERROR(Io, "Eigenvector " + std::to_string(k) + " has a"
-                              + " wrong index (expected " + std::to_string(vecRecord.index) 
-                              + ") in file '" + filename + "'");
-            }
-            eval[k] = vecRecord.eval;
-        }
-        binReader.close();
-    }
-
-    template <typename T>
-    void basicReadSingle(T &evec, double &eval, const std::string filename, 
-                         const unsigned int index)
-    {
-        ScidacReader binReader;
-        VecRecord    vecRecord;
-
-        binReader.open(filename);
-        binReader.skipPastObjectRecord(SCIDAC_FILE_XML);
-        LOG(Message) << "Reading eigenvector " << index << std::endl;
-        binReader.readScidacFieldRecord(evec, vecRecord);
-        if (vecRecord.index != index)
-        {
-            HADRONS_ERROR(Io, "Eigenvector " + std::to_string(index) + " has a"
-                          + " wrong index (expected " + std::to_string(vecRecord.index) 
-                          + ") in file '" + filename + "'");
-        }
-        eval = vecRecord.eval;
-        binReader.close();
-    }
-
-    template <typename T>
-    void basicWrite(const std::string filename, std::vector<T> &evec, 
-                    const std::vector<double> &eval, const unsigned int size)
-    {
-        ScidacWriter binWriter(evec[0]._grid->IsBoss());
-        XmlWriter    xmlWriter("", "eigenPackPar");
-
-        makeFileDir(filename, evec[0]._grid);
-        xmlWriter.pushXmlString(record.operatorXml);
-        xmlWriter.pushXmlString(record.solverXml);
-        binWriter.open(filename);
-        binWriter.writeLimeObject(1, 1, xmlWriter, "parameters", SCIDAC_FILE_XML);
-        for(int k = 0; k < size; ++k) 
-        {
-            VecRecord vecRecord;
-
-            vecRecord.index = k;
-            vecRecord.eval  = eval[k];
-            LOG(Message) << "Writing eigenvector " << k << std::endl;
-            binWriter.writeScidacFieldRecord(evec[k], vecRecord, DEFAULT_ASCII_PREC);
-        }
-        binWriter.close();
-    }
-
-    template <typename T>
-    void basicWriteSingle(const std::string filename, T &evec, 
-                          const double eval, const unsigned int index)
-    {
-        ScidacWriter binWriter(evec._grid->IsBoss());
-        XmlWriter    xmlWriter("", "eigenPackPar");
-        VecRecord    vecRecord;
-
-        makeFileDir(filename, evec._grid);
-        xmlWriter.pushXmlString(record.operatorXml);
-        xmlWriter.pushXmlString(record.solverXml);
-        binWriter.open(filename);
-        binWriter.writeLimeObject(1, 1, xmlWriter, "parameters", SCIDAC_FILE_XML);
-        vecRecord.index = index;
-        vecRecord.eval  = eval;
-        LOG(Message) << "Writing eigenvector " << index << std::endl;
-        binWriter.writeScidacFieldRecord(evec, vecRecord, DEFAULT_ASCII_PREC);
-        binWriter.close();
-    }
-};
-
-template <typename FineF, typename CoarseF>
-class CoarseEigenPack: public EigenPack<FineF>
-{
-public:
-    typedef CoarseF CoarseField;
-public:
-    std::vector<RealD>   evalCoarse;
-    std::vector<CoarseF> evecCoarse;
-public:
-    CoarseEigenPack(void)          = default;
-    virtual ~CoarseEigenPack(void) = default;
-
-    CoarseEigenPack(const size_t sizeFine, const size_t sizeCoarse, 
-                    GridBase *gridFine, GridBase *gridCoarse)
-    {
-        resize(sizeFine, sizeCoarse, gridFine, gridCoarse);
-    }
-
-    void resize(const size_t sizeFine, const size_t sizeCoarse, 
-                GridBase *gridFine, GridBase *gridCoarse)
-    {
-        EigenPack<FineF>::resize(sizeFine, gridFine);
-        evalCoarse.resize(sizeCoarse);
-        evecCoarse.resize(sizeCoarse, gridCoarse);
-    }
-
-    void readFine(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < this->evec.size(); ++k)
-            {
-                this->basicReadSingle(this->evec[k], this->eval[k], this->evecFilename(fileStem + "_fine", k, traj), k);
-            }
-        }
-        else
-        {
-            this->basicRead(this->evec, this->eval, this->evecFilename(fileStem + "_fine", -1, traj), this->evec.size());
-        }
-    }
-
-    void readCoarse(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < evecCoarse.size(); ++k)
-            {
-                this->basicReadSingle(evecCoarse[k], evalCoarse[k], this->evecFilename(fileStem + "_coarse", k, traj), k);
-            }
-        }
-        else
-        {
-            this->basicRead(evecCoarse, evalCoarse, this->evecFilename(fileStem + "_coarse", -1, traj), evecCoarse.size());
-        }
-    }
-
-    virtual void read(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        readFine(fileStem, multiFile, traj);
-        readCoarse(fileStem, multiFile, traj);
-    }
-
-    void writeFine(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < this->evec.size(); ++k)
-            {
-                this->basicWriteSingle(this->evecFilename(fileStem + "_fine", k, traj), this->evec[k], this->eval[k], k);
-            }
-        }
-        else
-        {
-            this->basicWrite(this->evecFilename(fileStem + "_fine", -1, traj), this->evec, this->eval, this->evec.size());
-        }
-    }
-
-    void writeCoarse(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        if (multiFile)
-        {
-            for(int k = 0; k < evecCoarse.size(); ++k)
-            {
-                this->basicWriteSingle(this->evecFilename(fileStem + "_coarse", k, traj), evecCoarse[k], evalCoarse[k], k);
-            }
-        }
-        else
-        {
-            this->basicWrite(this->evecFilename(fileStem + "_coarse", -1, traj), evecCoarse, evalCoarse, evecCoarse.size());
-        }
-    }
-    
-    virtual void write(const std::string fileStem, const bool multiFile, const int traj = -1)
-    {
-        writeFine(fileStem, multiFile, traj);
-        writeCoarse(fileStem, multiFile, traj);
-    }
-};
-
-template <typename FImpl>
-using FermionEigenPack = EigenPack<typename FImpl::FermionField>;
-
-template <typename FImpl, int nBasis>
-using CoarseFermionEigenPack = CoarseEigenPack<
-    typename FImpl::FermionField,
-    typename LocalCoherenceLanczos<typename FImpl::SiteSpinor, 
-                                   typename FImpl::SiteComplex, 
-                                   nBasis>::CoarseField>;
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_EigenPack_hpp_

extras/Hadrons/Environment.cc

@@ -35,7 +35,7 @@ using namespace QCD;
 using namespace Hadrons;
 
 #define ERROR_NO_ADDRESS(address)\
-HADRONS_ERROR(Definition, "no object with address " + std::to_string(address));
+HADRON_ERROR(Definition, "no object with address " + std::to_string(address));
 
 /******************************************************************************
  *                       Environment implementation                           *
@@ -49,10 +49,11 @@ Environment::Environment(void)
         dim_, GridDefaultSimd(nd_, vComplex::Nsimd()),
         GridDefaultMpi()));
     gridRb4d_.reset(SpaceTimeGrid::makeFourDimRedBlackGrid(grid4d_.get()));
-    vol_ = 1.;
-    for (auto d: dim_)
+    auto loc = getGrid()->LocalDimensions();
+    locVol_ = 1;
+    for (unsigned int d = 0; d < loc.size(); ++d)
     {
-        vol_ *= d;
+        locVol_ *= loc[d];
     }
     rng4d_.reset(new GridParallelRNG(grid4d_.get()));
 }
@@ -60,7 +61,7 @@ Environment::Environment(void)
 // grids ///////////////////////////////////////////////////////////////////////
 void Environment::createGrid(const unsigned int Ls)
 {
-    if ((Ls > 1) and (grid5d_.find(Ls) == grid5d_.end()))
+    if (grid5d_.find(Ls) == grid5d_.end())
     {
         auto g = getGrid();
         
@@ -69,49 +70,6 @@ void Environment::createGrid(const unsigned int Ls)
     }
 }
 
-void Environment::createCoarseGrid(const std::vector<int> &blockSize, 
-                                   const unsigned int Ls)
-{
-    int              nd      = getNd();
-    std::vector<int> fineDim = getDim(), coarseDim;
-    unsigned int     cLs;
-    auto             key4d = blockSize, key5d = blockSize;
-
-    createGrid(Ls);
-    coarseDim.resize(nd);
-    for (int d = 0; d < coarseDim.size(); d++)
-    {
-        coarseDim[d] = fineDim[d]/blockSize[d];
-        if (coarseDim[d]*blockSize[d] != fineDim[d])
-        {
-            HADRONS_ERROR(Size, "Fine dimension " + std::to_string(d) 
-                         + " (" + std::to_string(fineDim[d]) 
-                         + ") not divisible by coarse dimension ("
-                         + std::to_string(coarseDim[d]) + ")"); 
-        }
-    }
-    if (blockSize.size() > nd)
-    {
-        cLs = Ls/blockSize[nd];
-        if (cLs*blockSize[nd] != Ls)
-        {
-            HADRONS_ERROR(Size, "Fine Ls (" + std::to_string(Ls) 
-                         + ") not divisible by coarse Ls ("
-                         + std::to_string(cLs) + ")");
-        }
-        key4d.resize(nd);
-        key5d.push_back(Ls);
-    }
-    gridCoarse4d_[key4d].reset(
-        SpaceTimeGrid::makeFourDimGrid(coarseDim, 
-            GridDefaultSimd(nd, vComplex::Nsimd()), GridDefaultMpi()));
-    if (Ls > 1)
-    {
-        gridCoarse5d_[key5d].reset(
-            SpaceTimeGrid::makeFiveDimGrid(cLs, gridCoarse4d_[key4d].get()));
-    }
-}
-
 GridCartesian * Environment::getGrid(const unsigned int Ls) const
 {
     try
@@ -127,7 +85,7 @@ GridCartesian * Environment::getGrid(const unsigned int Ls) const
     }
     catch(std::out_of_range &)
     {
-        HADRONS_ERROR(Definition, "no grid with Ls= " + std::to_string(Ls));
+        HADRON_ERROR(Definition, "no grid with Ls= " + std::to_string(Ls));
     }
 }
 
@@ -146,31 +104,7 @@ GridRedBlackCartesian * Environment::getRbGrid(const unsigned int Ls) const
     }
     catch(std::out_of_range &)
     {
-        HADRONS_ERROR(Definition, "no red-black grid with Ls= " + std::to_string(Ls));
-    }
-}
-
-GridCartesian * Environment::getCoarseGrid(
-    const std::vector<int> &blockSize, const unsigned int Ls) const
-{
-    auto key = blockSize;
-
-    try
-    {
-        if (Ls == 1)
-        {
-            key.resize(getNd());
-            return gridCoarse4d_.at(key).get();
-        }
-        else
-        {
-            key.push_back(Ls);
-            return gridCoarse5d_.at(key).get();
-        }
-    }
-    catch(std::out_of_range &)
-    {
-        HADRONS_ERROR(Definition, "no coarse grid with Ls= " + std::to_string(Ls));
+        HADRON_ERROR(Definition, "no red-black 5D grid with Ls= " + std::to_string(Ls));
     }
 }
 
@@ -189,9 +123,9 @@ int Environment::getDim(const unsigned int mu) const
     return dim_[mu];
 }
 
-double Environment::getVolume(void) const
+unsigned long int Environment::getLocalVolume(void) const
 {
-    return vol_;
+    return locVol_;
 }
 
 // random number generator /////////////////////////////////////////////////////
@@ -220,7 +154,7 @@ void Environment::addObject(const std::string name, const int moduleAddress)
     }
     else
     {
-        HADRONS_ERROR(Definition, "object '" + name + "' already exists");
+        HADRON_ERROR(Definition, "object '" + name + "' already exists");
     }
 }
 
@@ -243,7 +177,7 @@ unsigned int Environment::getObjectAddress(const std::string name) const
     }
     else
     {
-        HADRONS_ERROR(Definition, "no object with name '" + name + "'");
+        HADRON_ERROR(Definition, "no object with name '" + name + "'");
     }
 }
 
@@ -336,7 +270,7 @@ int Environment::getObjectModule(const std::string name) const
 
 unsigned int Environment::getObjectLs(const unsigned int address) const
 {
-    if (hasCreatedObject(address))
+    if (hasObject(address))
     {
         return object_[address].Ls;
     }

extras/Hadrons/Environment.hpp

@@ -78,7 +78,7 @@ private:
         Size                    size{0};
         Storage                 storage{Storage::object};
         unsigned int            Ls{0};
-        const std::type_info    *type{nullptr}, *derivedType{nullptr};
+        const std::type_info    *type{nullptr};
         std::string             name;
         int                     module{-1};
         std::unique_ptr<Object> data{nullptr};
@@ -86,16 +86,12 @@ private:
 public:
     // grids
     void                    createGrid(const unsigned int Ls);
-    void                    createCoarseGrid(const std::vector<int> &blockSize,
-                                             const unsigned int Ls = 1);
     GridCartesian *         getGrid(const unsigned int Ls = 1) const;
     GridRedBlackCartesian * getRbGrid(const unsigned int Ls = 1) const;
-    GridCartesian *         getCoarseGrid(const std::vector<int> &blockSize,
-                                          const unsigned int Ls = 1) const;
     std::vector<int>        getDim(void) const;
     int                     getDim(const unsigned int mu) const;
+    unsigned long int       getLocalVolume(void) const;
     unsigned int            getNd(void) const;
-    double                  getVolume(void) const;
     // random number generator
     void                    setSeed(const std::vector<int> &seed);
     GridParallelRNG *       get4dRng(void) const;
@@ -114,10 +110,6 @@ public:
                                          Ts && ... args);
     void                    setObjectModule(const unsigned int objAddress,
                                             const int modAddress);
-    template <typename B, typename T>
-    T *                     getDerivedObject(const unsigned int address) const;
-    template <typename B, typename T>
-    T *                     getDerivedObject(const std::string name) const;
     template <typename T>
     T *                     getObject(const unsigned int address) const;
     template <typename T>
@@ -155,7 +147,7 @@ public:
     void                    printContent(void) const;
 private:
     // general
-    double                                 vol_;
+    unsigned long int                      locVol_;
     bool                                   protect_{true};
     // grids
     std::vector<int>                       dim_;
@@ -163,8 +155,6 @@ private:
     std::map<unsigned int, GridPt>         grid5d_;
     GridRbPt                               gridRb4d_;
     std::map<unsigned int, GridRbPt>       gridRb5d_;
-    std::map<std::vector<int>, GridPt>     gridCoarse4d_;
-    std::map<std::vector<int>, GridPt>     gridCoarse5d_;
     unsigned int                           nd_;
     // random number generator
     RngPt                                  rng4d_;
@@ -186,7 +176,7 @@ Holder<T>::Holder(T *pt)
 template <typename T>
 T & Holder<T>::get(void) const
 {
-    return *objPt_.get();
+    return &objPt_.get();
 }
 
 template <typename T>
@@ -231,8 +221,7 @@ void Environment::createDerivedObject(const std::string name,
         object_[address].Ls      = Ls;
         object_[address].data.reset(new Holder<B>(new T(std::forward<Ts>(args)...)));
         object_[address].size    = MemoryProfiler::stats->maxAllocated - initMem;
-        object_[address].type        = &typeid(B);
-        object_[address].derivedType = &typeid(T);
+        object_[address].type    = &typeid(T);
         if (MemoryProfiler::stats == &memStats)
         {
             MemoryProfiler::stats = nullptr;
@@ -242,10 +231,9 @@ void Environment::createDerivedObject(const std::string name,
     else if ((object_[address].storage != Storage::cache) or 
              (object_[address].storage != storage)        or
              (object_[address].name    != name)           or
-             (object_[address].type        != &typeid(B))     or
-             (object_[address].derivedType != &typeid(T)))
+             (object_[address].type    != &typeid(T)))
     {
-        HADRONS_ERROR(Definition, "object '" + name + "' already allocated");
+        HADRON_ERROR(Definition, "object '" + name + "' already allocated");
     }
 }
 
@@ -258,64 +246,36 @@ void Environment::createObject(const std::string name,
     createDerivedObject<T, T>(name, storage, Ls, std::forward<Ts>(args)...);
 }
 
-template <typename B, typename T>
-T * Environment::getDerivedObject(const unsigned int address) const
+template <typename T>
+T * Environment::getObject(const unsigned int address) const
 {
     if (hasObject(address))
     {
         if (hasCreatedObject(address))
         {
-            if (auto h = dynamic_cast<Holder<B> *>(object_[address].data.get()))
+            if (auto h = dynamic_cast<Holder<T> *>(object_[address].data.get()))
             {
-                if (&typeid(T) == &typeid(B))
-                {
-                    return dynamic_cast<T *>(h->getPt());
+                return h->getPt();
             }
             else
             {
-                    if (auto hder = dynamic_cast<T *>(h->getPt()))
-                    {
-                        return hder;
-                    }
-                    else
-                    {
-                        HADRONS_ERROR(Definition, "object with address " + std::to_string(address) +
-                            " cannot be casted to '" + typeName(&typeid(T)) +
-                            "' (has type '" + typeName(&typeid(h->get())) + "')");
-                    }
-                }
-            }
-            else
-            {
-                HADRONS_ERROR(Definition, "object with address " + std::to_string(address) +
-                            " does not have type '" + typeName(&typeid(B)) +
+                HADRON_ERROR(Definition, "object with address " + std::to_string(address) +
+                            " does not have type '" + typeName(&typeid(T)) +
                             "' (has type '" + getObjectType(address) + "')");
             }
         }
         else
         {
-            HADRONS_ERROR(Definition, "object with address " + std::to_string(address) +
+            HADRON_ERROR(Definition, "object with address " + std::to_string(address) +
                          " is empty");
         }
     }
     else
     {
-        HADRONS_ERROR(Definition, "no object with address " + std::to_string(address));
+        HADRON_ERROR(Definition, "no object with address " + std::to_string(address));
     }
 }
 
-template <typename B, typename T>
-T * Environment::getDerivedObject(const std::string name) const
-{
-    return getDerivedObject<B, T>(getObjectAddress(name));
-}
-
-template <typename T>
-T * Environment::getObject(const unsigned int address) const
-{
-    return getDerivedObject<T, T>(address);
-}
-
 template <typename T>
 T * Environment::getObject(const std::string name) const
 {
@@ -338,7 +298,7 @@ bool Environment::isObjectOfType(const unsigned int address) const
     }
     else
     {
-        HADRONS_ERROR(Definition, "no object with address " + std::to_string(address));
+        HADRON_ERROR(Definition, "no object with address " + std::to_string(address));
     }
 }
 

extras/Hadrons/Exceptions.cc

@@ -27,8 +27,6 @@ See the full license in the file "LICENSE" in the top level distribution directo
 /*  END LEGAL */
 
 #include <Grid/Hadrons/Exceptions.hpp>
-#include <Grid/Hadrons/VirtualMachine.hpp>
-#include <Grid/Hadrons/Module.hpp>
 
 #ifndef ERR_SUFF
 #define ERR_SUFF " (" + loc + ")"
@@ -49,7 +47,6 @@ CONST_EXC(Definition, Logic("definition error: " + msg, loc))
 CONST_EXC(Implementation, Logic("implementation error: " + msg, loc))
 CONST_EXC(Range, Logic("range error: " + msg, loc))
 CONST_EXC(Size, Logic("size error: " + msg, loc))
-
 // runtime errors
 CONST_EXC(Runtime, runtime_error(msg + ERR_SUFF))
 CONST_EXC(Argument, Runtime("argument error: " + msg, loc))
@@ -58,24 +55,3 @@ CONST_EXC(Memory, Runtime("memory error: " + msg, loc))
 CONST_EXC(Parsing, Runtime("parsing error: " + msg, loc))
 CONST_EXC(Program, Runtime("program error: " + msg, loc))
 CONST_EXC(System, Runtime("system error: " + msg, loc))
-
-// abort functions
-void Grid::Hadrons::Exceptions::abort(const std::exception& e)
-{
-    auto &vm = VirtualMachine::getInstance();
-    int  mod = vm.getCurrentModule();
-
-    LOG(Error) << "FATAL ERROR -- Exception " << typeName(&typeid(e)) 
-               << std::endl;
-    if (mod >= 0)
-    {
-        LOG(Error) << "During execution of module '"
-                    << vm.getModuleName(mod) << "' (address " << mod << ")"
-                    << std::endl;
-    }
-    LOG(Error) << e.what() << std::endl;
-    LOG(Error) << "Aborting program" << std::endl;
-    Grid_finalize();
-
-    exit(EXIT_FAILURE);
-}

extras/Hadrons/Exceptions.hpp

@@ -34,10 +34,11 @@ See the full license in the file "LICENSE" in the top level distribution directo
 #include <Grid/Hadrons/Global.hpp>
 #endif
 
-#define HADRONS_SRC_LOC std::string(__FUNCTION__) + " at " \
-                        + std::string(__FILE__) + ":" + std::to_string(__LINE__)
-#define HADRONS_ERROR(exc, msg)\
-throw(Exceptions::exc(msg, HADRONS_SRC_LOC));
+#define SRC_LOC std::string(__FUNCTION__) + " at " + std::string(__FILE__) + ":"\
+                + std::to_string(__LINE__)
+#define HADRON_ERROR(exc, msg)\
+LOG(Error) << msg << std::endl;\
+throw(Exceptions::exc(msg, SRC_LOC));
 
 #define DECL_EXC(name, base) \
 class name: public base\
@@ -56,7 +57,6 @@ namespace Exceptions
     DECL_EXC(Implementation, Logic);
     DECL_EXC(Range, Logic);
     DECL_EXC(Size, Logic);
-
     // runtime errors
     DECL_EXC(Runtime, std::runtime_error);
     DECL_EXC(Argument, Runtime);
@@ -65,9 +65,6 @@ namespace Exceptions
     DECL_EXC(Parsing, Runtime);
     DECL_EXC(Program, Runtime);
     DECL_EXC(System, Runtime);
-
-    // abort functions
-    void abort(const std::exception& e);
 }
 
 END_HADRONS_NAMESPACE

extras/Hadrons/Factory.hpp

@@ -94,7 +94,7 @@ std::unique_ptr<T> Factory<T>::create(const std::string type,
     }
     catch (std::out_of_range &)
     {
-        HADRONS_ERROR(Argument, "object of type '" + type + "' unknown");
+        HADRON_ERROR(Argument, "object of type '" + type + "' unknown");
     }
     
     return func(name);

extras/Hadrons/GeneticScheduler.hpp

@@ -57,9 +57,7 @@ public:
     virtual ~GeneticScheduler(void) = default;
     // access
     const Gene & getMinSchedule(void);
-    V            getMinValue(void);
-    // reset population
-    void initPopulation(void);
+    int          getMinValue(void);
     // breed a new generation
     void nextGeneration(void);
     // heuristic benchmarks
@@ -78,6 +76,8 @@ public:
         return out;
     }
 private:
+    // evolution steps
+    void initPopulation(void);
     void doCrossover(void);
     void doMutation(void);
     // genetic operators
@@ -116,7 +116,7 @@ GeneticScheduler<V, T>::getMinSchedule(void)
 }
 
 template <typename V, typename T>
-V GeneticScheduler<V, T>::getMinValue(void)
+int GeneticScheduler<V, T>::getMinValue(void)
 {
     return population_.begin()->first;
 }
@@ -130,7 +130,7 @@ void GeneticScheduler<V, T>::nextGeneration(void)
     {
         initPopulation();
     }
-    //LOG(Debug) << "Starting population:\n" << *this << std::endl;
+    LOG(Debug) << "Starting population:\n" << *this << std::endl;
     
     // random mutations
     //PARALLEL_FOR_LOOP
@@ -138,7 +138,7 @@ void GeneticScheduler<V, T>::nextGeneration(void)
     {
         doMutation();
     }
-    //LOG(Debug) << "After mutations:\n" << *this << std::endl;
+    LOG(Debug) << "After mutations:\n" << *this << std::endl;
     
     // mating
     //PARALLEL_FOR_LOOP
@@ -146,14 +146,14 @@ void GeneticScheduler<V, T>::nextGeneration(void)
     {
         doCrossover();
     }
-    //LOG(Debug) << "After mating:\n" << *this << std::endl;
+    LOG(Debug) << "After mating:\n" << *this << std::endl;
     
     // grim reaper
     auto it = population_.begin();
     
     std::advance(it, par_.popSize);
     population_.erase(it, population_.end());
-    //LOG(Debug) << "After grim reaper:\n" << *this << std::endl;
+    LOG(Debug) << "After grim reaper:\n" << *this << std::endl;
 }
 
 // evolution steps /////////////////////////////////////////////////////////////

extras/Hadrons/Global.cc

@@ -37,38 +37,20 @@ HadronsLogger Hadrons::HadronsLogWarning(1,"Warning");
 HadronsLogger Hadrons::HadronsLogMessage(1,"Message");
 HadronsLogger Hadrons::HadronsLogIterative(1,"Iterative");
 HadronsLogger Hadrons::HadronsLogDebug(1,"Debug");
-HadronsLogger Hadrons::HadronsLogIRL(1,"IRL");
 
 void Hadrons::initLogger(void)
 {
     auto w = std::string("Hadrons").length();
-    int  cw = 8;
-
-
     GridLogError.setTopWidth(w);
     GridLogWarning.setTopWidth(w);
     GridLogMessage.setTopWidth(w);
     GridLogIterative.setTopWidth(w);
     GridLogDebug.setTopWidth(w);
-    GridLogIRL.setTopWidth(w);
-    GridLogError.setChanWidth(cw);
-    GridLogWarning.setChanWidth(cw);
-    GridLogMessage.setChanWidth(cw);
-    GridLogIterative.setChanWidth(cw);
-    GridLogDebug.setChanWidth(cw);
-    GridLogIRL.setChanWidth(cw);
-    HadronsLogError.Active(true);
-    HadronsLogWarning.Active(true);
+    HadronsLogError.Active(GridLogError.isActive());
+    HadronsLogWarning.Active(GridLogWarning.isActive());
     HadronsLogMessage.Active(GridLogMessage.isActive());
     HadronsLogIterative.Active(GridLogIterative.isActive());
     HadronsLogDebug.Active(GridLogDebug.isActive());
-    HadronsLogIRL.Active(GridLogIRL.isActive());
-    HadronsLogError.setChanWidth(cw);
-    HadronsLogWarning.setChanWidth(cw);
-    HadronsLogMessage.setChanWidth(cw);
-    HadronsLogIterative.setChanWidth(cw);
-    HadronsLogDebug.setChanWidth(cw);
-    HadronsLogIRL.setChanWidth(cw);
 }
 
 // type utilities //////////////////////////////////////////////////////////////
@@ -92,84 +74,3 @@ const std::string Hadrons::resultFileExt = "h5";
 #else
 const std::string Hadrons::resultFileExt = "xml";
 #endif
-
-// recursive mkdir /////////////////////////////////////////////////////////////
-int Hadrons::mkdir(const std::string dirName)
-{
-    if (!dirName.empty() and access(dirName.c_str(), R_OK|W_OK|X_OK))
-    {
-        mode_t mode755;
-        char   tmp[MAX_PATH_LENGTH];
-        char   *p = NULL;
-        size_t len;
-
-        mode755 = S_IRWXU|S_IRGRP|S_IXGRP|S_IROTH|S_IXOTH;
-
-        snprintf(tmp, sizeof(tmp), "%s", dirName.c_str());
-        len = strlen(tmp);
-        if(tmp[len - 1] == '/')
-        {
-            tmp[len - 1] = 0;
-        }
-        for(p = tmp + 1; *p; p++)
-        {
-            if(*p == '/')
-            {
-                *p = 0;
-                ::mkdir(tmp, mode755);
-                *p = '/';
-            }
-        }
-
-        return ::mkdir(tmp, mode755);
-    }
-    else
-    {
-        return 0;
-    }
-}
-
-std::string Hadrons::basename(const std::string &s)
-{
-    constexpr char sep = '/';
-    size_t         i   = s.rfind(sep, s.length());
-    
-    if (i != std::string::npos)
-    {
-        return s.substr(i+1, s.length() - i);
-    }
-    else
-    {
-        return s;
-    }
-}
-
-std::string Hadrons::dirname(const std::string &s)
-{
-    constexpr char sep = '/';
-    size_t         i   = s.rfind(sep, s.length());
-    
-    if (i != std::string::npos)
-    {
-        return s.substr(0, i);
-    }
-    else
-    {
-        return "";
-    }
-}
-
-void Hadrons::makeFileDir(const std::string filename, GridBase *g)
-{
-    if (g->IsBoss())
-    {
-        std::string dir    = dirname(filename);
-        int         status = mkdir(dir);
-
-        if (status)
-        {
-            HADRONS_ERROR(Io, "cannot create directory '" + dir
-                          + "' ( " + std::strerror(errno) + ")");
-        }
-    }
-}

extras/Hadrons/Global.hpp

@@ -39,40 +39,30 @@ See the full license in the file "LICENSE" in the top level distribution directo
 #define SITE_SIZE_TYPE size_t
 #endif
 
-#ifndef DEFAULT_ASCII_PREC
-#define DEFAULT_ASCII_PREC 16
-#endif
+#define BEGIN_HADRONS_NAMESPACE \
+namespace Grid {\
+using namespace QCD;\
+namespace Hadrons {\
+using Grid::operator<<;
+#define END_HADRONS_NAMESPACE }}
+
+#define BEGIN_MODULE_NAMESPACE(name)\
+namespace name {\
+using Grid::operator<<;
+#define END_MODULE_NAMESPACE }
 
 /* the 'using Grid::operator<<;' statement prevents a very nasty compilation
  * error with GCC 5 (clang & GCC 6 compile fine without it).
  */
 
-#define BEGIN_HADRONS_NAMESPACE \
-namespace Grid {\
-using namespace QCD;\
-namespace Hadrons {\
-using Grid::operator<<;\
-using Grid::operator>>;
-#define END_HADRONS_NAMESPACE }}
-
-#define BEGIN_MODULE_NAMESPACE(name)\
-namespace name {\
-using Grid::operator<<;\
-using Grid::operator>>;
-
-#define END_MODULE_NAMESPACE }
-
 #ifndef FIMPL
 #define FIMPL WilsonImplR
 #endif
-#ifndef ZFIMPL
-#define ZFIMPL ZWilsonImplR
-#endif
 #ifndef SIMPL
 #define SIMPL ScalarImplCR
 #endif
 #ifndef GIMPL
-#define GIMPL PeriodicGimplR
+#define GIMPL GimplTypesR
 #endif
 
 BEGIN_HADRONS_NAMESPACE
@@ -93,15 +83,17 @@ typedef typename SImpl::Field ScalarField##suffix;\
 typedef typename SImpl::Field PropagatorField##suffix;
 
 #define SOLVER_TYPE_ALIASES(FImpl, suffix)\
-typedef Solver<FImpl> Solver##suffix;
+typedef std::function<void(FermionField##suffix &,\
+                      const FermionField##suffix &)> SolverFn##suffix;
 
 #define SINK_TYPE_ALIASES(suffix)\
 typedef std::function<SlicedPropagator##suffix\
                       (const PropagatorField##suffix &)> SinkFn##suffix;
 
-#define FG_TYPE_ALIASES(FImpl, suffix)\
+#define FGS_TYPE_ALIASES(FImpl, suffix)\
 FERM_TYPE_ALIASES(FImpl, suffix)\
-GAUGE_TYPE_ALIASES(FImpl, suffix)
+GAUGE_TYPE_ALIASES(FImpl, suffix)\
+SOLVER_TYPE_ALIASES(FImpl, suffix)
 
 // logger
 class HadronsLogger: public Logger
@@ -112,14 +104,13 @@ public:
 };
 
 #define LOG(channel) std::cout << HadronsLog##channel
-#define HADRONS_DEBUG_VAR(var) LOG(Debug) << #var << "= " << (var) << std::endl;
+#define DEBUG_VAR(var) LOG(Debug) << #var << "= " << (var) << std::endl;
 
 extern HadronsLogger HadronsLogError;
 extern HadronsLogger HadronsLogWarning;
 extern HadronsLogger HadronsLogMessage;
 extern HadronsLogger HadronsLogIterative;
 extern HadronsLogger HadronsLogDebug;
-extern HadronsLogger HadronsLogIRL;
 
 void initLogger(void);
 
@@ -189,28 +180,6 @@ typedef XmlWriter ResultWriter;
 #define RESULT_FILE_NAME(name) \
 name + "." + std::to_string(vm().getTrajectory()) + "." + resultFileExt
 
-// recursive mkdir
-#define MAX_PATH_LENGTH 512u
-int         mkdir(const std::string dirName);
-std::string basename(const std::string &s);
-std::string dirname(const std::string &s);
-void        makeFileDir(const std::string filename, GridBase *g);
-
-// default Schur convention
-#ifndef HADRONS_DEFAULT_SCHUR 
-#define HADRONS_DEFAULT_SCHUR DiagTwo
-#endif
-#define _HADRONS_SCHUR_OP_(conv) Schur##conv##Operator
-#define HADRONS_SCHUR_OP(conv) _HADRONS_SCHUR_OP_(conv)
-#define HADRONS_DEFAULT_SCHUR_OP HADRONS_SCHUR_OP(HADRONS_DEFAULT_SCHUR)
-#define _HADRONS_SCHUR_SOLVE_(conv) SchurRedBlack##conv##Solve
-#define HADRONS_SCHUR_SOLVE(conv) _HADRONS_SCHUR_SOLVE_(conv)
-#define HADRONS_DEFAULT_SCHUR_SOLVE HADRONS_SCHUR_SOLVE(HADRONS_DEFAULT_SCHUR)
-
-// stringify macro
-#define _HADRONS_STR(x) #x
-#define HADRONS_STR(x) _HADRONS_STR(x)
-
 END_HADRONS_NAMESPACE
 
 #include <Grid/Hadrons/Exceptions.hpp>

extras/Hadrons/Graph.hpp

@@ -184,7 +184,7 @@ void Graph<T>::removeVertex(const T &value)
     }
     else
     {
-        HADRONS_ERROR(Range, "vertex does not exists");
+        HADRON_ERROR(Range, "vertex does not exists");
     }
 
     // remove all edges containing the vertex
@@ -213,7 +213,7 @@ void Graph<T>::removeEdge(const Edge &e)
     }
     else
     {
-        HADRONS_ERROR(Range, "edge does not exists");
+        HADRON_ERROR(Range, "edge does not exists");
     }
 }
 
@@ -259,7 +259,7 @@ void Graph<T>::mark(const T &value, const bool doMark)
     }
     else
     {
-        HADRONS_ERROR(Range, "vertex does not exists");
+        HADRON_ERROR(Range, "vertex does not exists");
     }
 }
 
@@ -297,7 +297,7 @@ bool Graph<T>::isMarked(const T &value) const
     }
     else
     {
-        HADRONS_ERROR(Range, "vertex does not exists");
+        HADRON_ERROR(Range, "vertex does not exists");
         
         return false;
     }
@@ -543,7 +543,7 @@ std::vector<T> Graph<T>::topoSort(void)
     {
         if (tmpMarked.at(v))
         {
-            HADRONS_ERROR(Range, "cannot topologically sort a cyclic graph");
+            HADRON_ERROR(Range, "cannot topologically sort a cyclic graph");
         }
         if (!isMarked(v))
         {
@@ -602,7 +602,7 @@ std::vector<T> Graph<T>::topoSort(Gen &gen)
     {
         if (tmpMarked.at(v))
         {
-            HADRONS_ERROR(Range, "cannot topologically sort a cyclic graph");
+            HADRON_ERROR(Range, "cannot topologically sort a cyclic graph");
         }
         if (!isMarked(v))
         {

extras/Hadrons/HadronsXmlRun.cc

@@ -56,8 +56,6 @@ int main(int argc, char *argv[])
     Grid_init(&argc, &argv);
     
     // execution
-    try
-    {
     Application application(parameterFileName);
     
     application.parseParameterFile(parameterFileName);
@@ -66,11 +64,6 @@ int main(int argc, char *argv[])
         application.loadSchedule(scheduleFileName);
     }
     application.run();
-    }
-    catch (const std::exception& e)
-    {
-        Exceptions::abort(e);
-    }
     
     // epilogue
     LOG(Message) << "Grid is finalizing now" << std::endl;

extras/Hadrons/HadronsXmlSchedule.cc

@@ -2,7 +2,7 @@
 
 Grid physics library, www.github.com/paboyle/Grid 
 
-Source file: extras/Hadrons/Modules/MAction/Wilson.cc
+Source file: extras/Hadrons/HadronsXmlSchedule.cc
 
 Copyright (C) 2015-2018
 
@@ -25,11 +25,41 @@ with this program; if not, write to the Free Software Foundation, Inc.,
 See the full license in the file "LICENSE" in the top level distribution directory
 *************************************************************************************/
 /*  END LEGAL */
-#include <Grid/Hadrons/Modules/MAction/Wilson.hpp>
+
+#include <Grid/Hadrons/Application.hpp>
 
 using namespace Grid;
+using namespace QCD;
 using namespace Hadrons;
-using namespace MAction;
 
-template class Grid::Hadrons::MAction::TWilson<FIMPL>;
+int main(int argc, char *argv[])
+{
+    // parse command line
+    std::string parameterFileName, scheduleFileName;
     
+    if (argc < 3)
+    {
+        std::cerr << "usage: " << argv[0] << " <parameter file> <schedule output> [Grid options]";
+        std::cerr << std::endl;
+        std::exit(EXIT_FAILURE);
+    }
+    parameterFileName = argv[1];
+    scheduleFileName  = argv[2];
+    
+    // initialization
+    Grid_init(&argc, &argv);
+    
+    // execution
+    Application application;
+    
+    application.parseParameterFile(parameterFileName);
+    application.schedule();
+    application.printSchedule();
+    application.saveSchedule(scheduleFileName);
+    
+    // epilogue
+    LOG(Message) << "Grid is finalizing now" << std::endl;
+    Grid_finalize();
+    
+    return EXIT_SUCCESS;
+}

extras/Hadrons/Makefile.am

@@ -1,5 +1,5 @@
 lib_LIBRARIES = libHadrons.a
-bin_PROGRAMS  = HadronsXmlRun
+bin_PROGRAMS  = HadronsXmlRun HadronsXmlSchedule
 
 include modules.inc
 
@@ -14,10 +14,7 @@ libHadrons_a_SOURCES = \
 libHadrons_adir = $(pkgincludedir)/Hadrons
 nobase_libHadrons_a_HEADERS = \
 	$(modules_hpp)            \
-	AllToAllVectors.hpp       \
-	AllToAllReduction.hpp       \
 	Application.hpp           \
-	EigenPack.hpp             \
 	Environment.hpp           \
 	Exceptions.hpp            \
 	Factory.hpp               \
@@ -27,8 +24,10 @@ nobase_libHadrons_a_HEADERS = \
 	Module.hpp                \
 	Modules.hpp               \
 	ModuleFactory.hpp         \
-	Solver.hpp                \
 	VirtualMachine.hpp
 
 HadronsXmlRun_SOURCES = HadronsXmlRun.cc
 HadronsXmlRun_LDADD   = libHadrons.a -lGrid
+
+HadronsXmlSchedule_SOURCES = HadronsXmlSchedule.cc
+HadronsXmlSchedule_LDADD   = libHadrons.a -lGrid

extras/Hadrons/Module.cc

@@ -49,7 +49,7 @@ std::string ModuleBase::getName(void) const
 // get factory registration name if available
 std::string ModuleBase::getRegisteredName(void)
 {
-    HADRONS_ERROR(Definition, "module '" + getName() + "' has no registered type"
+    HADRON_ERROR(Definition, "module '" + getName() + "' has no registered type"
                  + " in the factory");
 }
 

extras/Hadrons/Module.hpp

@@ -35,7 +35,32 @@ See the full license in the file "LICENSE" in the top level distribution directo
 BEGIN_HADRONS_NAMESPACE
 
 // module registration macros
-#define MODULE_REGISTER(mod, base, ns)\
+#define MODULE_REGISTER(mod, base)\
+class mod: public base\
+{\
+public:\
+    typedef base Base;\
+    using Base::Base;\
+    virtual std::string getRegisteredName(void)\
+    {\
+        return std::string(#mod);\
+    }\
+};\
+class mod##ModuleRegistrar\
+{\
+public:\
+    mod##ModuleRegistrar(void)\
+    {\
+        ModuleFactory &modFac = ModuleFactory::getInstance();\
+        modFac.registerBuilder(#mod, [&](const std::string name)\
+                              {\
+                                  return std::unique_ptr<mod>(new mod(name));\
+                              });\
+    }\
+};\
+static mod##ModuleRegistrar mod##ModuleRegistrarInstance;
+
+#define MODULE_REGISTER_NS(mod, base, ns)\
 class mod: public base\
 {\
 public:\
@@ -60,19 +85,12 @@ public:\
 };\
 static ns##mod##ModuleRegistrar ns##mod##ModuleRegistrarInstance;
 
-#define MODULE_REGISTER_TMP(mod, base, ns)\
-extern template class base;\
-MODULE_REGISTER(mod, ARG(base), ns);
-
 #define ARG(...) __VA_ARGS__
 #define MACRO_REDIRECT(arg1, arg2, arg3, macro, ...) macro
 
 #define envGet(type, name)\
 *env().template getObject<type>(name)
 
-#define envGetDerived(base, type, name)\
-*env().template getDerivedObject<base, type>(name)
-
 #define envGetTmp(type, var)\
 type &var = *env().template getObject<type>(getName() + "_tmp_" + #var)
 
@@ -119,16 +137,6 @@ envTmp(type, name, Ls, env().getGrid(Ls))
 #define envTmpLat(...)\
 MACRO_REDIRECT(__VA_ARGS__, envTmpLat5, envTmpLat4)(__VA_ARGS__)
 
-#define saveResult(ioStem, name, result)\
-if (env().getGrid()->IsBoss() and !ioStem.empty())\
-{\
-    makeFileDir(ioStem, env().getGrid());\
-    {\
-        ResultWriter _writer(RESULT_FILE_NAME(ioStem));\
-        write(_writer, name, result);\
-    }\
-}
-
 /******************************************************************************
  *                            Module class                                    *
  ******************************************************************************/
@@ -154,8 +162,6 @@ public:
     // parse parameters
     virtual void parseParameters(XmlReader &reader, const std::string name) = 0;
     virtual void saveParameters(XmlWriter &writer, const std::string name) = 0;
-    // parameter string
-    virtual std::string parString(void) const = 0;
     // setup
     virtual void setup(void) {};
     virtual void execute(void) = 0;
@@ -184,8 +190,6 @@ public:
     // parse parameters
     virtual void parseParameters(XmlReader &reader, const std::string name);
     virtual void saveParameters(XmlWriter &writer, const std::string name);
-    // parameter string
-    virtual std::string parString(void) const;
     // parameter access
     const P & par(void) const;
     void      setPar(const P &par);
@@ -211,8 +215,6 @@ public:
         push(writer, "options");
         pop(writer);
     };
-    // parameter string (empty)
-    virtual std::string parString(void) const {return "";};
 };
 
 /******************************************************************************
@@ -235,16 +237,6 @@ void Module<P>::saveParameters(XmlWriter &writer, const std::string name)
     write(writer, name, par_);
 }
 
-template <typename P>
-std::string Module<P>::parString(void) const
-{
-    XmlWriter writer("", "");
-
-    write(writer, par_.SerialisableClassName(), par_);
-
-    return writer.string();
-}
-
 template <typename P>
 const P & Module<P>::par(void) const
 {

extras/Hadrons/Modules.hpp

@@ -1,62 +1,64 @@
-#include <Grid/Hadrons/Modules/MScalarSUN/TrKinetic.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TimeMomProbe.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/StochFreeField.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TwoPointNPR.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/Grad.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TransProj.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/Div.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TrMag.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/ShiftProbe.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/Utils.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/EMT.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TwoPoint.hpp>
-#include <Grid/Hadrons/Modules/MScalarSUN/TrPhi.hpp>
-#include <Grid/Hadrons/Modules/MScalar/FreeProp.hpp>
-#include <Grid/Hadrons/Modules/MScalar/Scalar.hpp>
-#include <Grid/Hadrons/Modules/MScalar/ScalarVP.hpp>
-#include <Grid/Hadrons/Modules/MScalar/ChargedProp.hpp>
-#include <Grid/Hadrons/Modules/MScalar/VPCounterTerms.hpp>
-#include <Grid/Hadrons/Modules/MLoop/NoiseLoop.hpp>
-#include <Grid/Hadrons/Modules/MIO/LoadEigenPack.hpp>
-#include <Grid/Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp>
-#include <Grid/Hadrons/Modules/MIO/LoadBinary.hpp>
-#include <Grid/Hadrons/Modules/MIO/LoadNersc.hpp>
-#include <Grid/Hadrons/Modules/MSink/Smear.hpp>
-#include <Grid/Hadrons/Modules/MSink/Point.hpp>
-#include <Grid/Hadrons/Modules/MFermion/FreeProp.hpp>
-#include <Grid/Hadrons/Modules/MFermion/GaugeProp.hpp>
-#include <Grid/Hadrons/Modules/MGauge/FundtoHirep.hpp>
-#include <Grid/Hadrons/Modules/MGauge/Random.hpp>
-#include <Grid/Hadrons/Modules/MGauge/StoutSmearing.hpp>
-#include <Grid/Hadrons/Modules/MGauge/Unit.hpp>
-#include <Grid/Hadrons/Modules/MGauge/StochEm.hpp>
-#include <Grid/Hadrons/Modules/MGauge/UnitEm.hpp>
-#include <Grid/Hadrons/Modules/MUtilities/TestSeqGamma.hpp>
-#include <Grid/Hadrons/Modules/MUtilities/TestSeqConserved.hpp>
-#include <Grid/Hadrons/Modules/MSource/SeqConserved.hpp>
-#include <Grid/Hadrons/Modules/MSource/Z2.hpp>
-#include <Grid/Hadrons/Modules/MSource/Wall.hpp>
-#include <Grid/Hadrons/Modules/MSource/SeqGamma.hpp>
-#include <Grid/Hadrons/Modules/MSource/Point.hpp>
-#include <Grid/Hadrons/Modules/MContraction/MesonFieldGamma.hpp>
-#include <Grid/Hadrons/Modules/MContraction/WeakHamiltonianEye.hpp>
+/*************************************************************************************
+
+Grid physics library, www.github.com/paboyle/Grid 
+
+Source file: extras/Hadrons/Modules.hpp
+
+Copyright (C) 2015-2018
+
+Author: Antonin Portelli <antonin.portelli@me.com>
+Author: Lanny91 <andrew.lawson@gmail.com>
+
+This program is free software; you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation; either version 2 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License along
+with this program; if not, write to the Free Software Foundation, Inc.,
+51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+See the full license in the file "LICENSE" in the top level distribution directory
+*************************************************************************************/
+/*  END LEGAL */
 #include <Grid/Hadrons/Modules/MContraction/Baryon.hpp>
-#include <Grid/Hadrons/Modules/MContraction/A2APionField.hpp>
 #include <Grid/Hadrons/Modules/MContraction/Meson.hpp>
 #include <Grid/Hadrons/Modules/MContraction/WeakHamiltonian.hpp>
+#include <Grid/Hadrons/Modules/MContraction/WeakHamiltonianNonEye.hpp>
+#include <Grid/Hadrons/Modules/MContraction/DiscLoop.hpp>
 #include <Grid/Hadrons/Modules/MContraction/WeakNeutral4ptDisc.hpp>
 #include <Grid/Hadrons/Modules/MContraction/Gamma3pt.hpp>
-#include <Grid/Hadrons/Modules/MContraction/DiscLoop.hpp>
-#include <Grid/Hadrons/Modules/MContraction/WeakHamiltonianNonEye.hpp>
-#include <Grid/Hadrons/Modules/MContraction/A2AMeson.hpp>
 #include <Grid/Hadrons/Modules/MContraction/WardIdentity.hpp>
-#include <Grid/Hadrons/Modules/MContraction/A2AMesonField.hpp>
-#include <Grid/Hadrons/Modules/MAction/WilsonClover.hpp>
-#include <Grid/Hadrons/Modules/MAction/ScaledDWF.hpp>
-#include <Grid/Hadrons/Modules/MAction/MobiusDWF.hpp>
-#include <Grid/Hadrons/Modules/MAction/Wilson.hpp>
-#include <Grid/Hadrons/Modules/MAction/DWF.hpp>
-#include <Grid/Hadrons/Modules/MAction/ZMobiusDWF.hpp>
+#include <Grid/Hadrons/Modules/MContraction/WeakHamiltonianEye.hpp>
+#include <Grid/Hadrons/Modules/MFermion/GaugeProp.hpp>
+#include <Grid/Hadrons/Modules/MSource/SeqGamma.hpp>
+#include <Grid/Hadrons/Modules/MSource/Point.hpp>
+#include <Grid/Hadrons/Modules/MSource/Wall.hpp>
+#include <Grid/Hadrons/Modules/MSource/Z2.hpp>
+#include <Grid/Hadrons/Modules/MSource/SeqConserved.hpp>
+#include <Grid/Hadrons/Modules/MSink/Smear.hpp>
+#include <Grid/Hadrons/Modules/MSink/Point.hpp>
 #include <Grid/Hadrons/Modules/MSolver/RBPrecCG.hpp>
-#include <Grid/Hadrons/Modules/MSolver/LocalCoherenceLanczos.hpp>
-#include <Grid/Hadrons/Modules/MSolver/A2AVectors.hpp>
+#include <Grid/Hadrons/Modules/MGauge/Unit.hpp>
+#include <Grid/Hadrons/Modules/MGauge/Random.hpp>
+#include <Grid/Hadrons/Modules/MGauge/StochEm.hpp>
+#include <Grid/Hadrons/Modules/MGauge/FundtoHirep.hpp>
+#include <Grid/Hadrons/Modules/MUtilities/TestSeqGamma.hpp>
+#include <Grid/Hadrons/Modules/MUtilities/TestSeqConserved.hpp>
+#include <Grid/Hadrons/Modules/MLoop/NoiseLoop.hpp>
+#include <Grid/Hadrons/Modules/MScalar/FreeProp.hpp>
+#include <Grid/Hadrons/Modules/MScalar/Scalar.hpp>
+#include <Grid/Hadrons/Modules/MScalar/ChargedProp.hpp>
+#include <Grid/Hadrons/Modules/MAction/DWF.hpp>
+#include <Grid/Hadrons/Modules/MAction/Wilson.hpp>
+#include <Grid/Hadrons/Modules/MAction/WilsonClover.hpp>
+#include <Grid/Hadrons/Modules/MScalarSUN/TrMag.hpp>
+#include <Grid/Hadrons/Modules/MScalarSUN/TwoPoint.hpp>
+#include <Grid/Hadrons/Modules/MScalarSUN/TrPhi.hpp>
+#include <Grid/Hadrons/Modules/MIO/LoadNersc.hpp>
+#include <Grid/Hadrons/Modules/MIO/LoadBinary.hpp>

extras/Hadrons/Modules/MAction/DWF.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MAction/DWF.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MAction/DWF.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MAction;
-
-template class Grid::Hadrons::MAction::TDWF<FIMPL>;
-

extras/Hadrons/Modules/MAction/DWF.hpp

@@ -56,12 +56,12 @@ template <typename FImpl>
 class TDWF: public Module<DWFPar>
 {
 public:
-    FG_TYPE_ALIASES(FImpl,);
+    FGS_TYPE_ALIASES(FImpl,);
 public:
     // constructor
     TDWF(const std::string name);
     // destructor
-    virtual ~TDWF(void) {};
+    virtual ~TDWF(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -72,8 +72,7 @@ protected:
     virtual void execute(void);
 };
 
-extern template class TDWF<FIMPL>;
-MODULE_REGISTER_TMP(DWF, TDWF<FIMPL>, MAction);
+MODULE_REGISTER_NS(DWF, TDWF<FIMPL>, MAction);
 
 /******************************************************************************
  *                        DWF template implementation                         *

extras/Hadrons/Modules/MAction/MobiusDWF.cc

@@ -1,7 +0,0 @@
-#include <Grid/Hadrons/Modules/MAction/MobiusDWF.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MAction;
-
-template class Grid::Hadrons::MAction::TMobiusDWF<FIMPL>;

extras/Hadrons/Modules/MAction/MobiusDWF.hpp

@@ -1,109 +0,0 @@
-#ifndef Hadrons_MAction_MobiusDWF_hpp_
-#define Hadrons_MAction_MobiusDWF_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                      Mobius domain-wall fermion action                     *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MAction)
-
-class MobiusDWFPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(MobiusDWFPar,
-                                    std::string , gauge,
-                                    unsigned int, Ls,
-                                    double      , mass,
-                                    double      , M5,
-                                    double      , b,
-                                    double      , c,
-                                    std::string , boundary);
-};
-
-template <typename FImpl>
-class TMobiusDWF: public Module<MobiusDWFPar>
-{
-public:
-    FG_TYPE_ALIASES(FImpl,);
-public:
-    // constructor
-    TMobiusDWF(const std::string name);
-    // destructor
-    virtual ~TMobiusDWF(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(MobiusDWF, TMobiusDWF<FIMPL>, MAction);
-
-/******************************************************************************
- *                      TMobiusDWF implementation                             *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TMobiusDWF<FImpl>::TMobiusDWF(const std::string name)
-: Module<MobiusDWFPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TMobiusDWF<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().gauge};
-    
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TMobiusDWF<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TMobiusDWF<FImpl>::setup(void)
-{
-    LOG(Message) << "Setting up Mobius domain wall fermion matrix with m= "
-                 << par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls 
-                 << ", b= " << par().b << ", c= " << par().c
-                 << " using gauge field '" << par().gauge << "'"
-                 << std::endl;
-    LOG(Message) << "Fermion boundary conditions: " << par().boundary
-                 << std::endl;
-
-    env().createGrid(par().Ls);
-    auto &U    = envGet(LatticeGaugeField, par().gauge);
-    auto &g4   = *env().getGrid();
-    auto &grb4 = *env().getRbGrid();
-    auto &g5   = *env().getGrid(par().Ls);
-    auto &grb5 = *env().getRbGrid(par().Ls);
-    std::vector<Complex> boundary = strToVec<Complex>(par().boundary);
-    typename MobiusFermion<FImpl>::ImplParams implParams(boundary);
-    envCreateDerived(FMat, MobiusFermion<FImpl>, getName(), par().Ls, U, g5,
-                     grb5, g4, grb4, par().mass, par().M5, par().b, par().c,
-                     implParams);
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TMobiusDWF<FImpl>::execute(void)
-{}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MAction_MobiusDWF_hpp_

extras/Hadrons/Modules/MAction/ScaledDWF.cc

@@ -1,7 +0,0 @@
-#include <Grid/Hadrons/Modules/MAction/ScaledDWF.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MAction;
-
-template class Grid::Hadrons::MAction::TScaledDWF<FIMPL>;

extras/Hadrons/Modules/MAction/ScaledDWF.hpp

@@ -1,108 +0,0 @@
-#ifndef Hadrons_MAction_ScaledDWF_hpp_
-#define Hadrons_MAction_ScaledDWF_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                      Scaled domain wall fermion                            *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MAction)
-
-class ScaledDWFPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(ScaledDWFPar,
-                                    std::string , gauge,
-                                    unsigned int, Ls,
-                                    double      , mass,
-                                    double      , M5,
-                                    double      , scale,
-                                    std::string , boundary);
-};
-
-template <typename FImpl>
-class TScaledDWF: public Module<ScaledDWFPar>
-{
-public:
-    FG_TYPE_ALIASES(FImpl,);
-public:
-    // constructor
-    TScaledDWF(const std::string name);
-    // destructor
-    virtual ~TScaledDWF(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(ScaledDWF, TScaledDWF<FIMPL>, MAction);
-
-/******************************************************************************
- *                      TScaledDWF implementation                             *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TScaledDWF<FImpl>::TScaledDWF(const std::string name)
-: Module<ScaledDWFPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TScaledDWF<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().gauge};
-    
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TScaledDWF<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TScaledDWF<FImpl>::setup(void)
-{
-    LOG(Message) << "Setting up scaled domain wall fermion matrix with m= "
-                 << par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls 
-                 << ", scale= " << par().scale
-                 << " using gauge field '" << par().gauge << "'"
-                 << std::endl;
-    LOG(Message) << "Fermion boundary conditions: " << par().boundary
-                 << std::endl;
-
-    env().createGrid(par().Ls);
-    auto &U    = envGet(LatticeGaugeField, par().gauge);
-    auto &g4   = *env().getGrid();
-    auto &grb4 = *env().getRbGrid();
-    auto &g5   = *env().getGrid(par().Ls);
-    auto &grb5 = *env().getRbGrid(par().Ls);
-    std::vector<Complex> boundary = strToVec<Complex>(par().boundary);
-    typename MobiusFermion<FImpl>::ImplParams implParams(boundary);
-    envCreateDerived(FMat, ScaledShamirFermion<FImpl>, getName(), par().Ls, U, g5,
-                     grb5, g4, grb4, par().mass, par().M5, par().scale,
-                     implParams);
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TScaledDWF<FImpl>::execute(void)
-{}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MAction_ScaledDWF_hpp_

extras/Hadrons/Modules/MAction/Wilson.hpp

@@ -54,12 +54,12 @@ template <typename FImpl>
 class TWilson: public Module<WilsonPar>
 {
 public:
-    FG_TYPE_ALIASES(FImpl,);
+    FGS_TYPE_ALIASES(FImpl,);
 public:
     // constructor
     TWilson(const std::string name);
     // destructor
-    virtual ~TWilson(void) {};
+    virtual ~TWilson(void) = default;
     // dependencies/products
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -70,7 +70,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(Wilson, TWilson<FIMPL>, MAction);
+MODULE_REGISTER_NS(Wilson, TWilson<FIMPL>, MAction);
 
 /******************************************************************************
  *                     TWilson template implementation                        *
@@ -102,7 +102,7 @@ std::vector<std::string> TWilson<FImpl>::getOutput(void)
 template <typename FImpl>
 void TWilson<FImpl>::setup(void)
 {
-    LOG(Message) << "Setting up Wilson fermion matrix with m= " << par().mass
+    LOG(Message) << "Setting up TWilson fermion matrix with m= " << par().mass
                  << " using gauge field '" << par().gauge << "'" << std::endl;
     LOG(Message) << "Fermion boundary conditions: " << par().boundary
                  << std::endl;

extras/Hadrons/Modules/MAction/WilsonClover.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MAction/WilsonClover.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MAction/WilsonClover.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MAction;
-
-template class Grid::Hadrons::MAction::TWilsonClover<FIMPL>;
-

extras/Hadrons/Modules/MAction/WilsonClover.hpp

@@ -2,13 +2,12 @@
 
 Grid physics library, www.github.com/paboyle/Grid 
 
-Source file: extras/Hadrons/Modules/MAction/WilsonClover.hpp
+Source file: extras/Hadrons/Modules/MAction/Wilson.hpp
 
-Copyright (C) 2015-2018
+Copyright (C) 2015
+Copyright (C) 2016
 
 Author: Antonin Portelli <antonin.portelli@me.com>
-Author: Guido Cossu <guido.cossu@ed.ac.uk>
-Author: pretidav <david.preti@csic.es>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -38,7 +37,7 @@ See the full license in the file "LICENSE" in the top level distribution directo
 BEGIN_HADRONS_NAMESPACE
 
 /******************************************************************************
- *                         Wilson clover quark action                         *
+ *                            TWilson quark action                            *
  ******************************************************************************/
 BEGIN_MODULE_NAMESPACE(MAction)
 
@@ -59,12 +58,12 @@ template <typename FImpl>
 class TWilsonClover: public Module<WilsonCloverPar>
 {
 public:
-    FG_TYPE_ALIASES(FImpl,);
+    FGS_TYPE_ALIASES(FImpl,);
 public:
     // constructor
     TWilsonClover(const std::string name);
     // destructor
-    virtual ~TWilsonClover(void) {};
+    virtual ~TWilsonClover(void) = default;
     // dependencies/products
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -74,7 +73,7 @@ public:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(WilsonClover, TWilsonClover<FIMPL>, MAction);
+MODULE_REGISTER_NS(WilsonClover, TWilsonClover<FIMPL>, MAction);
 
 /******************************************************************************
  *                     TWilsonClover template implementation                        *
@@ -106,7 +105,13 @@ std::vector<std::string> TWilsonClover<FImpl>::getOutput(void)
 template <typename FImpl>
 void TWilsonClover<FImpl>::setup(void)
 {
-    LOG(Message) << "Setting up Wilson clover fermion matrix with m= " << par().mass
+    //unsigned int size;
+
+    // size = 2*env().template lattice4dSize<typename FImpl::DoubledGaugeField>();
+    // env().registerObject(getName(), size);
+
+
+    LOG(Message) << "Setting up TWilsonClover fermion matrix with m= " << par().mass
                  << " using gauge field '" << par().gauge << "'" << std::endl;
     LOG(Message) << "Fermion boundary conditions: " << par().boundary 
                  << std::endl;
@@ -123,12 +128,23 @@ void TWilsonClover<FImpl>::setup(void)
 						  par().csw_t,
 					      par().clover_anisotropy,
 						  implParams); 
+
+
+    //FMat *fMatPt = new WilsonCloverFermion<FImpl>(U, grid, gridRb, par().mass,
+	//					  par().csw_r,
+	//					  par().csw_t,
+	//				      par().clover_anisotropy,
+	//					  implParams);
+    //env().setObject(getName(), fMatPt);
+
 }
 
 // execution ///////////////////////////////////////////////////////////////////
 template <typename FImpl>
 void TWilsonClover<FImpl>::execute()
-{}
+{
+
+}
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MAction/ZMobiusDWF.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MAction/ZMobiusDWF.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MAction/ZMobiusDWF.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MAction;
-
-template class Grid::Hadrons::MAction::TZMobiusDWF<ZFIMPL>;
-

extras/Hadrons/Modules/MAction/ZMobiusDWF.hpp

@@ -1,143 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MAction/ZMobiusDWF.hpp
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#ifndef Hadrons_MAction_ZMobiusDWF_hpp_
-#define Hadrons_MAction_ZMobiusDWF_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                      z-Mobius domain-wall fermion action                   *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MAction)
-
-class ZMobiusDWFPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(ZMobiusDWFPar,
-                                    std::string                      , gauge,
-                                    unsigned int                     , Ls,
-                                    double                           , mass,
-                                    double                           , M5,
-                                    double                           , b,
-                                    double                           , c,
-                                    std::vector<std::complex<double>>, omega,
-                                    std::string                      , boundary);
-};
-
-template <typename FImpl>
-class TZMobiusDWF: public Module<ZMobiusDWFPar>
-{
-public:
-    FG_TYPE_ALIASES(FImpl,);
-public:
-    // constructor
-    TZMobiusDWF(const std::string name);
-    // destructor
-    virtual ~TZMobiusDWF(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(ZMobiusDWF, TZMobiusDWF<ZFIMPL>, MAction);
-
-/******************************************************************************
- *                     TZMobiusDWF implementation                             *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TZMobiusDWF<FImpl>::TZMobiusDWF(const std::string name)
-: Module<ZMobiusDWFPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TZMobiusDWF<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().gauge};
-    
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TZMobiusDWF<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TZMobiusDWF<FImpl>::setup(void)
-{
-    LOG(Message) << "Setting up z-Mobius domain wall fermion matrix with m= "
-                 << par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls 
-                 << ", b= " << par().b << ", c= " << par().c
-                 << " using gauge field '" << par().gauge << "'"
-                 << std::endl;
-    LOG(Message) << "Omegas: " << std::endl;
-    for (unsigned int i = 0; i < par().omega.size(); ++i)
-    {
-        LOG(Message) << "  omega[" << i << "]= " << par().omega[i] << std::endl;
-    }
-    LOG(Message) << "Fermion boundary conditions: " << par().boundary
-                 << std::endl;
-
-    env().createGrid(par().Ls);
-    auto &U    = envGet(LatticeGaugeField, par().gauge);
-    auto &g4   = *env().getGrid();
-    auto &grb4 = *env().getRbGrid();
-    auto &g5   = *env().getGrid(par().Ls);
-    auto &grb5 = *env().getRbGrid(par().Ls);
-    auto omega = par().omega;
-    std::vector<Complex> boundary = strToVec<Complex>(par().boundary);
-    typename ZMobiusFermion<FImpl>::ImplParams implParams(boundary);
-    envCreateDerived(FMat, ZMobiusFermion<FImpl>, getName(), par().Ls, U, g5,
-                     grb5, g4, grb4, par().mass, par().M5, omega,
-                     par().b, par().c, implParams);
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TZMobiusDWF<FImpl>::execute(void)
-{}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MAction_ZMobiusDWF_hpp_

extras/Hadrons/Modules/MContraction/A2AMeson.cc

@@ -1,8 +0,0 @@
-#include <Grid/Hadrons/Modules/MContraction/A2AMeson.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TA2AMeson<FIMPL>;
-template class Grid::Hadrons::MContraction::TA2AMeson<ZFIMPL>;

extras/Hadrons/Modules/MContraction/A2AMeson.hpp

@@ -1,207 +0,0 @@
-#ifndef Hadrons_MContraction_A2AMeson_hpp_
-#define Hadrons_MContraction_A2AMeson_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/AllToAllVectors.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         A2AMeson                                 *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MContraction)
-
-typedef std::pair<Gamma::Algebra, Gamma::Algebra> GammaPair;
-
-class A2AMesonPar : Serializable
-{
-  public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(A2AMesonPar,
-                                    int, Nl,
-                                    int, N,
-                                    std::string, A2A1,
-                                    std::string, A2A2,
-                                    std::string, gammas,
-                                    std::string, output);
-};
-
-template <typename FImpl>
-class TA2AMeson : public Module<A2AMesonPar>
-{
-  public:
-    FERM_TYPE_ALIASES(FImpl, );
-    SOLVER_TYPE_ALIASES(FImpl, );
-
-    typedef A2AModesSchurDiagTwo<typename FImpl::FermionField, FMat, Solver> A2ABase;
-
-    class Result : Serializable
-    {
-      public:
-        GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
-                                        Gamma::Algebra, gamma_snk,
-                                        Gamma::Algebra, gamma_src,
-                                        std::vector<Complex>, corr);
-    };
-
-  public:
-    // constructor
-    TA2AMeson(const std::string name);
-    // destructor
-    virtual ~TA2AMeson(void){};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    virtual void parseGammaString(std::vector<GammaPair> &gammaList);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER(A2AMeson, ARG(TA2AMeson<FIMPL>), MContraction);
-MODULE_REGISTER(ZA2AMeson, ARG(TA2AMeson<ZFIMPL>), MContraction);
-
-/******************************************************************************
-*                  TA2AMeson implementation                             *
-******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TA2AMeson<FImpl>::TA2AMeson(const std::string name)
-    : Module<A2AMesonPar>(name)
-{
-}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TA2AMeson<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().A2A1 + "_class", par().A2A2 + "_class"};
-    in.push_back(par().A2A1 + "_w_high_4d");
-    in.push_back(par().A2A2 + "_v_high_4d");
-
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TA2AMeson<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {};
-
-    return out;
-}
-
-template <typename FImpl>
-void TA2AMeson<FImpl>::parseGammaString(std::vector<GammaPair> &gammaList)
-{
-    gammaList.clear();
-    // Parse individual contractions from input string.
-    gammaList = strToVec<GammaPair>(par().gammas);
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2AMeson<FImpl>::setup(void)
-{
-    int nt = env().getDim(Tp);
-    int N = par().N;
-
-    int Ls_ = env().getObjectLs(par().A2A1 + "_class");
-
-    envTmp(std::vector<FermionField>, "w1", 1, N, FermionField(env().getGrid(1)));
-    envTmp(std::vector<FermionField>, "v1", 1, N, FermionField(env().getGrid(1)));
-    envTmpLat(FermionField, "tmpv_5d", Ls_);
-    envTmpLat(FermionField, "tmpw_5d", Ls_);
-
-    envTmp(std::vector<ComplexD>, "MF_x", 1, nt);
-    envTmp(std::vector<ComplexD>, "MF_y", 1, nt);
-    envTmp(std::vector<ComplexD>, "tmp", 1, nt);
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2AMeson<FImpl>::execute(void)
-{
-    LOG(Message) << "Computing A2A meson contractions" << std::endl;
-
-    Result result;
-    Gamma g5(Gamma::Algebra::Gamma5);
-    std::vector<GammaPair> gammaList;
-    int nt = env().getDim(Tp);
-
-    parseGammaString(gammaList);
-
-    result.gamma_snk = gammaList[0].first;
-    result.gamma_src = gammaList[0].second;
-    result.corr.resize(nt);
-
-    int Nl = par().Nl;
-    int N  = par().N;
-    LOG(Message) << "N for A2A cont: " << N << std::endl;
-
-    envGetTmp(std::vector<ComplexD>, MF_x);
-    envGetTmp(std::vector<ComplexD>, MF_y);
-    envGetTmp(std::vector<ComplexD>, tmp);
-
-    for (unsigned int t = 0; t < nt; ++t)
-    {
-        tmp[t] = TensorRemove(MF_x[t] * MF_y[t] * 0.0);
-    }
-
-    Gamma gSnk(gammaList[0].first);
-    Gamma gSrc(gammaList[0].second);
-
-    auto &a2a1_fn = envGet(A2ABase, par().A2A1 + "_class");
-
-    envGetTmp(std::vector<FermionField>, w1);
-    envGetTmp(std::vector<FermionField>, v1);
-    envGetTmp(FermionField, tmpv_5d);
-    envGetTmp(FermionField, tmpw_5d);
-
-    LOG(Message) << "Finding v and w vectors for N =  " << N << std::endl;
-    for (int i = 0; i < N; i++)
-    {
-        a2a1_fn.return_v(i, tmpv_5d, v1[i]);
-        a2a1_fn.return_w(i, tmpw_5d, w1[i]);
-    }
-    LOG(Message) << "Found v and w vectors for N =  " << N << std::endl;
-    for (unsigned int i = 0; i < N; i++)
-    {
-        v1[i] = gSnk * v1[i];
-    }
-    int ty;
-    for (unsigned int i = 0; i < N; i++)
-    {
-        for (unsigned int j = 0; j < N; j++)
-        {
-            mySliceInnerProductVector(MF_x, w1[i], v1[j], Tp);
-            mySliceInnerProductVector(MF_y, w1[j], v1[i], Tp);
-            for (unsigned int t = 0; t < nt; ++t)
-            {
-                for (unsigned int tx = 0; tx < nt; tx++)
-                {
-                    ty = (tx + t) % nt;
-                    tmp[t] += TensorRemove((MF_x[tx]) * (MF_y[ty]));
-                }
-            }
-        }
-        if (i % 10 == 0)
-        {
-            LOG(Message) << "MF for i = " << i << " of " << N << std::endl;
-        }
-    }
-    double NTinv = 1.0 / static_cast<double>(nt);
-    for (unsigned int t = 0; t < nt; ++t)
-    {
-        result.corr[t] = NTinv * tmp[t];
-    }
-
-    saveResult(par().output, "meson", result);
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MContraction_A2AMeson_hpp_

extras/Hadrons/Modules/MContraction/A2AMesonField.cc

@@ -1,8 +0,0 @@
-#include <Grid/Hadrons/Modules/MContraction/A2AMesonField.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TA2AMesonField<FIMPL>;
-template class Grid::Hadrons::MContraction::TA2AMesonField<ZFIMPL>;

extras/Hadrons/Modules/MContraction/A2AMesonField.hpp

@@ -1,279 +0,0 @@
-#ifndef Hadrons_MContraction_A2AMesonField_hpp_
-#define Hadrons_MContraction_A2AMesonField_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/AllToAllVectors.hpp>
-
-#include <Grid/Hadrons/Modules/MContraction/A2Autils.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         A2AMesonField                                 *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MContraction)
-
-typedef std::pair<Gamma::Algebra, Gamma::Algebra> GammaPair;
-
-
-class A2AMesonFieldPar : Serializable
-{
-  public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(A2AMesonFieldPar,
-				    int, cacheBlock,
-				    int, schurBlock,
-				    int, Nmom,
-				    int, N,
-				    int, Nl,
-                                    std::string, A2A,
-                                    std::string, output);
-};
-
-template <typename FImpl>
-class TA2AMesonField : public Module<A2AMesonFieldPar>
-{
-  public:
-    FERM_TYPE_ALIASES(FImpl, );
-    SOLVER_TYPE_ALIASES(FImpl, );
-
-    typedef A2AModesSchurDiagTwo<typename FImpl::FermionField, FMat, Solver> A2ABase;
-
-  public:
-    // constructor
-    TA2AMesonField(const std::string name);
-    // destructor
-    virtual ~TA2AMesonField(void){};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-
-};
-
-MODULE_REGISTER(A2AMesonField, ARG(TA2AMesonField<FIMPL>), MContraction);
-MODULE_REGISTER(ZA2AMesonField, ARG(TA2AMesonField<ZFIMPL>), MContraction);
-
-/******************************************************************************
-*                  TA2AMesonField implementation                             *
-******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TA2AMesonField<FImpl>::TA2AMesonField(const std::string name)
-    : Module<A2AMesonFieldPar>(name)
-{
-}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TA2AMesonField<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().A2A + "_class"};
-    in.push_back(par().A2A + "_w_high_4d");
-    in.push_back(par().A2A + "_v_high_4d");
-
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TA2AMesonField<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {};
-
-    return out;
-}
-
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2AMesonField<FImpl>::setup(void)
-{
-    auto &a2a = envGet(A2ABase, par().A2A + "_class");
-    int nt = env().getDim(Tp);
-    int Nl = par().Nl;
-    int N  = par().N;
-    int Ls_ = env().getObjectLs(par().A2A + "_class");
-
-    // Four D fields
-    envTmp(std::vector<FermionField>, "w", 1, par().schurBlock, FermionField(env().getGrid(1)));
-    envTmp(std::vector<FermionField>, "v", 1, par().schurBlock, FermionField(env().getGrid(1)));
-
-    // 5D tmp
-    envTmpLat(FermionField, "tmp_5d", Ls_);
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2AMesonField<FImpl>::execute(void)
-{
-    LOG(Message) << "Computing A2A meson field" << std::endl;
-
-    auto &a2a = envGet(A2ABase, par().A2A + "_class");
-    
-    // 2+6+4+4 = 16 gammas
-    // Ordering defined here
-    std::vector<Gamma::Algebra> gammas ( {
-          Gamma::Algebra::Gamma5,
-	  Gamma::Algebra::Identity,    
-	  Gamma::Algebra::GammaX,
-	  Gamma::Algebra::GammaY,
-	  Gamma::Algebra::GammaZ,
-	  Gamma::Algebra::GammaT,
-	  Gamma::Algebra::GammaXGamma5,
-	  Gamma::Algebra::GammaYGamma5,
-	  Gamma::Algebra::GammaZGamma5,
-	  Gamma::Algebra::GammaTGamma5,
-	  Gamma::Algebra::SigmaXY,
-	  Gamma::Algebra::SigmaXZ,
-	  Gamma::Algebra::SigmaXT,
-	  Gamma::Algebra::SigmaYZ,
-	  Gamma::Algebra::SigmaYT,
-	  Gamma::Algebra::SigmaZT
-    });
-
-    ///////////////////////////////////////////////
-    // Square assumption for now Nl = Nr = N
-    ///////////////////////////////////////////////
-    int nt = env().getDim(Tp);
-    int nx = env().getDim(Xp);
-    int ny = env().getDim(Yp);
-    int nz = env().getDim(Zp);
-    int N  = par().N;
-    int Nl = par().Nl;
-    int ngamma = gammas.size();
-
-    int schurBlock = par().schurBlock;
-    int cacheBlock = par().cacheBlock;
-    int nmom       = par().Nmom;
-
-    ///////////////////////////////////////////////
-    // Momentum setup
-    ///////////////////////////////////////////////
-    GridBase *grid = env().getGrid(1);
-    std::vector<LatticeComplex> phases(nmom,grid);
-    for(int m=0;m<nmom;m++){
-      phases[m] = Complex(1.0);    // All zero momentum for now
-    }
-
-    Eigen::Tensor<ComplexD,5> mesonField       (nmom,ngamma,nt,N,N);    
-    LOG(Message) << "N = Nh+Nl for A2A MesonField is " << N << std::endl;
-
-    envGetTmp(std::vector<FermionField>, w);
-    envGetTmp(std::vector<FermionField>, v);
-    envGetTmp(FermionField, tmp_5d);
-
-    LOG(Message) << "Finding v and w vectors for N =  " << N << std::endl;
-
-    //////////////////////////////////////////////////////////////////////////
-    // i,j   is first  loop over SchurBlock factors reusing 5D matrices
-    // ii,jj is second loop over cacheBlock factors for high perf contractoin
-    // iii,jjj are loops within cacheBlock
-    // Total index is sum of these  i+ii+iii etc...
-    //////////////////////////////////////////////////////////////////////////
-    
-    double flops = 0.0;
-    double bytes = 0.0;
-    double vol   = nx*ny*nz*nt;
-    double t_schur=0;
-    double t_contr=0;
-    double t_int_0=0;
-    double t_int_1=0;
-    double t_int_2=0;
-    double t_int_3=0;
-
-    double t0 = usecond();
-    int N_i = N;
-    int N_j = N;
-    for(int i=0;i<N_i;i+=schurBlock){ //loop over SchurBlocking to suppress 5D matrix overhead
-    for(int j=0;j<N_j;j+=schurBlock){
-      
-
-      ///////////////////////////////////////////////////////////////
-      // Get the W and V vectors for this schurBlock^2 set of terms
-      ///////////////////////////////////////////////////////////////
-      int N_ii = MIN(N_i-i,schurBlock);
-      int N_jj = MIN(N_j-j,schurBlock);
-
-      t_schur-=usecond();
-      for(int ii =0;ii < N_ii;ii++) a2a.return_w(i+ii, tmp_5d, w[ii]);
-      for(int jj =0;jj < N_jj;jj++) a2a.return_v(j+jj, tmp_5d, v[jj]);
-      t_schur+=usecond();
-
-      LOG(Message) << "Found w vectors " << i <<" .. " << i+N_ii-1 << std::endl;
-      LOG(Message) << "Found v vectors " << j <<" .. " << j+N_jj-1 << std::endl;
-
-      ///////////////////////////////////////////////////////////////
-      // Series of cache blocked chunks of the contractions within this SchurBlock
-      /////////////////////////////////////////////////////////////// 
-      for(int ii=0;ii<N_ii;ii+=cacheBlock){
-      for(int jj=0;jj<N_jj;jj+=cacheBlock){
-
-	int N_iii = MIN(N_ii-ii,cacheBlock);
-	int N_jjj = MIN(N_jj-jj,cacheBlock);
-
-	Eigen::Tensor<ComplexD,5> mesonFieldBlocked(nmom,ngamma,nt,N_iii,N_jjj);    
-
-	t_contr-=usecond();
-	A2Autils<FImpl>::MesonField(mesonFieldBlocked, 
-				    &w[ii], 
-				    &v[jj], gammas, phases,Tp);
-	t_contr+=usecond();
-	flops += vol * ( 2 * 8.0 + 6.0 + 8.0*nmom) * N_iii*N_jjj*ngamma;
-
-	bytes  += vol * (12.0 * sizeof(Complex) ) * N_iii*N_jjj
-               +  vol * ( 2.0 * sizeof(Complex) *nmom ) * N_iii*N_jjj* ngamma;
-
-	///////////////////////////////////////////////////////////////
-	// Copy back to full meson field tensor
-	/////////////////////////////////////////////////////////////// 
-	parallel_for_nest2(int iii=0;iii< N_iii;iii++) {
-        for(int jjj=0;jjj< N_jjj;jjj++) {
-	  for(int m =0;m< nmom;m++) {
-	  for(int g =0;g< ngamma;g++) {
-          for(int t =0;t< nt;t++) {
-	    mesonField(m,g,t,i+ii+iii,j+jj+jjj) = mesonFieldBlocked(m,g,t,iii,jjj);
-	  }}}
-
-	}}
-      }}
-    }}
-
-
-    double nodes=grid->NodeCount();
-    double t1 = usecond();
-    LOG(Message) << " Contraction of MesonFields took "<<(t1-t0)/1.0e6<< " seconds "  << std::endl;
-    LOG(Message) << " Schur "<<(t_schur)/1.0e6<< " seconds "  << std::endl;
-    LOG(Message) << " Contr "<<(t_contr)/1.0e6<< " seconds "  << std::endl;
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build the pion correlator (two end)
-    // < PI_ij(t0) PI_ji (t0+t) >
-    /////////////////////////////////////////////////////////////////////////
-    std::vector<ComplexD> corr(nt,ComplexD(0.0));
-
-    for(int i=0;i<N;i++){
-    for(int j=0;j<N;j++){
-      int m=0; // first momentum
-      int g=0; // first gamma in above ordering is gamma5 for pion
-      for(int t0=0;t0<nt;t0++){
-      for(int t=0;t<nt;t++){
-	int tt = (t0+t)%nt;
-	corr[t] += mesonField(m,g,t0,i,j)* mesonField(m,g,tt,j,i);
-      }}
-    }}    
-    for(int t=0;t<nt;t++) corr[t] = corr[t]/ (double)nt;
-
-    for(int t=0;t<nt;t++) LOG(Message) << " " << t << " " << corr[t]<<std::endl;
-
-    //    saveResult(par().output, "meson", result);
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MContraction_A2AMesonField_hpp_

extras/Hadrons/Modules/MContraction/A2APionField.cc

@@ -1,8 +0,0 @@
-#include <Grid/Hadrons/Modules/MContraction/A2APionField.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TA2APionField<FIMPL>;
-template class Grid::Hadrons::MContraction::TA2APionField<ZFIMPL>;

extras/Hadrons/Modules/MContraction/A2APionField.hpp

@@ -1,502 +0,0 @@
-#ifndef Hadrons_MContraction_A2APionField_hpp_
-#define Hadrons_MContraction_A2APionField_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/AllToAllVectors.hpp>
-#include <Grid/Hadrons/Modules/MContraction/A2Autils.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         A2APionField                                       *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MContraction)
-
-typedef std::pair<Gamma::Algebra, Gamma::Algebra> GammaPair;
-
-
-class A2APionFieldPar : Serializable
-{
-  public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(A2APionFieldPar,
-				    int, cacheBlock,
-				    int, schurBlock,
-				    int, Nmom,
-                                    std::string, A2A_i,
-                                    std::string, A2A_j,
-                                    std::string, output);
-};
-
-template <typename FImpl>
-class TA2APionField : public Module<A2APionFieldPar>
-{
-public:
-  FERM_TYPE_ALIASES(FImpl, );
-  SOLVER_TYPE_ALIASES(FImpl, );
-
-  typedef typename FImpl::SiteSpinor vobj;
-
-  typedef typename vobj::scalar_object sobj;
-  typedef typename vobj::scalar_type scalar_type;
-  typedef typename vobj::vector_type vector_type;
-  
-  typedef iSpinMatrix<vector_type> SpinMatrix_v;
-  typedef iSpinMatrix<scalar_type> SpinMatrix_s;
-  typedef iSinglet<vector_type> Scalar_v;
-  typedef iSinglet<scalar_type> Scalar_s;
-
-  typedef A2AModesSchurDiagTwo<typename FImpl::FermionField, FMat, Solver> A2ABase;
-
-  public:
-    // constructor
-    TA2APionField(const std::string name);
-    // destructor
-    virtual ~TA2APionField(void){};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-
-};
-
-MODULE_REGISTER(A2APionField, ARG(TA2APionField<FIMPL>), MContraction);
-MODULE_REGISTER(ZA2APionField, ARG(TA2APionField<ZFIMPL>), MContraction);
-
-/******************************************************************************
-*                  TA2APionField implementation                             *
-******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TA2APionField<FImpl>::TA2APionField(const std::string name)
-    : Module<A2APionFieldPar>(name)
-{
-}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TA2APionField<FImpl>::getInput(void)
-{
-  std::vector<std::string> in;
-  in.push_back(par().A2A_i + "_class");
-  in.push_back(par().A2A_i + "_w_high_4d");
-  in.push_back(par().A2A_i + "_v_high_4d");
-  in.push_back(par().A2A_j + "_class");
-  in.push_back(par().A2A_j + "_w_high_4d");
-  in.push_back(par().A2A_j + "_v_high_4d");
-  
-  return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TA2APionField<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {};
-
-    return out;
-}
-
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2APionField<FImpl>::setup(void)
-{
-
-  // Four D fields
-  envTmp(std::vector<FermionField>, "wi", 1, par().schurBlock, FermionField(env().getGrid(1)));
-  envTmp(std::vector<FermionField>, "vi", 1, par().schurBlock, FermionField(env().getGrid(1)));
-  envTmp(std::vector<FermionField>, "wj", 1, par().schurBlock, FermionField(env().getGrid(1)));
-  envTmp(std::vector<FermionField>, "vj", 1, par().schurBlock, FermionField(env().getGrid(1)));
-
-  // 5D tmp
-  int Ls_i = env().getObjectLs(par().A2A_i + "_class");
-  envTmpLat(FermionField, "tmp_5d", Ls_i);
-  
-  int Ls_j= env().getObjectLs(par().A2A_j + "_class");
-  assert ( Ls_i == Ls_j ); 
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TA2APionField<FImpl>::execute(void)
-{
-    LOG(Message) << "Computing A2A Pion fields" << std::endl;
-
-    auto &a2a_i = envGet(A2ABase, par().A2A_i + "_class");
-    auto &a2a_j = envGet(A2ABase, par().A2A_j + "_class");
-
-    ///////////////////////////////////////////////
-    // Square assumption for now Nl = Nr = N
-    ///////////////////////////////////////////////
-    int nt = env().getDim(Tp);
-    int nx = env().getDim(Xp);
-    int ny = env().getDim(Yp);
-    int nz = env().getDim(Zp);
-
-    //    int N_i  = a2a_i.par().N;
-    //    int N_j  = a2a_j.par().N;
-    int N_i  = a2a_i.getN();
-    int N_j  = a2a_j.getN();
-
-    int nmom=par().Nmom;
-
-    int schurBlock = par().schurBlock;
-    int cacheBlock = par().cacheBlock;
-
-
-    ///////////////////////////////////////////////
-    // Momentum setup
-    ///////////////////////////////////////////////
-    GridBase *grid = env().getGrid(1);
-    std::vector<LatticeComplex> phases(nmom,grid);
-    for(int m=0;m<nmom;m++){
-      phases[m] = Complex(1.0);    // All zero momentum for now
-    }
-
-    ///////////////////////////////////////////////////////////////////////
-    // i and j represent different flavours, hits, with different ranks.
-    // in general non-square case.
-    ///////////////////////////////////////////////////////////////////////
-    Eigen::Tensor<ComplexD,4> pionFieldWVmom_ij     (nmom,nt,N_i,N_j);    
-    Eigen::Tensor<ComplexD,3> pionFieldWV_ij        (nt,N_i,N_j);    
-
-    Eigen::Tensor<ComplexD,4> pionFieldWVmom_ji     (nmom,nt,N_j,N_i);    
-    Eigen::Tensor<ComplexD,3> pionFieldWV_ji        (nt,N_j,N_i);    
-
-
-    LOG(Message) << "Rank for A2A PionField is " << N_i << " x "<<N_j << std::endl;
-
-    envGetTmp(std::vector<FermionField>, wi);
-    envGetTmp(std::vector<FermionField>, vi);
-
-    envGetTmp(std::vector<FermionField>, wj);
-    envGetTmp(std::vector<FermionField>, vj);
-    envGetTmp(FermionField, tmp_5d);
-
-    LOG(Message) << "Finding v and w vectors " << std::endl;
-
-    //////////////////////////////////////////////////////////////////////////
-    // i,j   is first  loop over SchurBlock factors reusing 5D matrices
-    // ii,jj is second loop over cacheBlock factors for high perf contractoin
-    // iii,jjj are loops within cacheBlock
-    // Total index is sum of these  i+ii+iii etc...
-    //////////////////////////////////////////////////////////////////////////
-    
-    double flops = 0.0;
-    double bytes = 0.0;
-    double vol   = nx*ny*nz*nt;
-    double vol3  = nx*ny*nz;
-    double t_schur=0;
-    double t_contr_vwm=0;
-    double t_contr_vw=0;
-    double t_contr_ww=0;
-    double t_contr_vv=0;
-
-    double tt0 = usecond();
-    for(int i=0;i<N_i;i+=schurBlock){ //loop over SchurBlocking to suppress 5D matrix overhead
-    for(int j=0;j<N_j;j+=schurBlock){
-
-      ///////////////////////////////////////////////////////////////
-      // Get the W and V vectors for this schurBlock^2 set of terms
-      ///////////////////////////////////////////////////////////////
-      int N_ii = MIN(N_i-i,schurBlock);
-      int N_jj = MIN(N_j-j,schurBlock);
-
-      t_schur-=usecond();
-      for(int ii =0;ii < N_ii;ii++) a2a_i.return_w(i+ii, tmp_5d, wi[ii]);
-      for(int jj =0;jj < N_jj;jj++) a2a_j.return_w(j+jj, tmp_5d, wj[jj]);
-
-      for(int ii =0;ii < N_ii;ii++) a2a_i.return_v(i+ii, tmp_5d, vi[ii]);
-      for(int jj =0;jj < N_jj;jj++) a2a_j.return_v(j+jj, tmp_5d, vj[jj]);
-      t_schur+=usecond();
-
-      LOG(Message) << "Found i w&v vectors " << i <<" .. " << i+N_ii-1 << std::endl;
-      LOG(Message) << "Found j w&v vectors " << j <<" .. " << j+N_jj-1 << std::endl;
-
-      ///////////////////////////////////////////////////////////////
-      // Series of cache blocked chunks of the contractions within this SchurBlock
-      /////////////////////////////////////////////////////////////// 
-      for(int ii=0;ii<N_ii;ii+=cacheBlock){
-      for(int jj=0;jj<N_jj;jj+=cacheBlock){
-
-	int N_iii = MIN(N_ii-ii,cacheBlock);
-	int N_jjj = MIN(N_jj-jj,cacheBlock);
-
-	Eigen::Tensor<ComplexD,4> pionFieldWVmomB_ij(nmom,nt,N_iii,N_jjj);    
-	Eigen::Tensor<ComplexD,4> pionFieldWVmomB_ji(nmom,nt,N_jjj,N_iii);    
-
-	Eigen::Tensor<ComplexD,3> pionFieldWVB_ij(nt,N_iii,N_jjj);    
-	Eigen::Tensor<ComplexD,3> pionFieldWVB_ji(nt,N_jjj,N_iii);    
-
-	t_contr_vwm-=usecond();
-	A2Autils<FImpl>::PionFieldWVmom(pionFieldWVmomB_ij, &wi[ii], &vj[jj], phases,Tp);
-	A2Autils<FImpl>::PionFieldWVmom(pionFieldWVmomB_ji, &wj[jj], &vi[ii], phases,Tp);
-	t_contr_vwm+=usecond();
-
-	t_contr_vw-=usecond();
-	A2Autils<FImpl>::PionFieldWV(pionFieldWVB_ij, &wi[ii], &vj[jj],Tp);
-	A2Autils<FImpl>::PionFieldWV(pionFieldWVB_ji, &wj[jj], &vi[ii],Tp);
-	t_contr_vw+=usecond();
-
-
-	flops += vol * ( 2 * 8.0 + 6.0 + 8.0*nmom) * N_iii*N_jjj;
-
-	bytes  += vol * (12.0 * sizeof(Complex) ) * N_iii*N_jjj
-	       +  vol * ( 2.0 * sizeof(Complex) *nmom ) * N_iii*N_jjj;
-
-	///////////////////////////////////////////////////////////////
-	// Copy back to full meson field tensor
-	/////////////////////////////////////////////////////////////// 
-	parallel_for_nest2(int iii=0;iii< N_iii;iii++) {
-        for(int jjj=0;jjj< N_jjj;jjj++) {
-
-	  for(int m =0;m< nmom;m++) {
-          for(int t =0;t< nt;t++) {
-	    pionFieldWVmom_ij(m,t,i+ii+iii,j+jj+jjj) = pionFieldWVmomB_ij(m,t,iii,jjj);
-	    pionFieldWVmom_ji(m,t,j+jj+jjj,i+ii+iii) = pionFieldWVmomB_ji(m,t,jjj,iii);
-	  }}
-
-          for(int t =0;t< nt;t++) {
-	    pionFieldWV_ij(t,i+ii+iii,j+jj+jjj) = pionFieldWVB_ij(t,iii,jjj);
-	    pionFieldWV_ji(t,j+jj+jjj,i+ii+iii) = pionFieldWVB_ji(t,jjj,iii);
-	  }
-
-	}}
-      }}
-    }}
-
-    double nodes=grid->NodeCount();
-    double tt1 = usecond();
-    LOG(Message) << " Contraction of PionFields took "<<(tt1-tt0)/1.0e6<< " seconds "  << std::endl;
-    LOG(Message) << " Schur "<<(t_schur)/1.0e6<< " seconds "  << std::endl;
-    LOG(Message) << " Contr WVmom "<<(t_contr_vwm)/1.0e6<< " seconds "  << std::endl;
-    LOG(Message) << " Contr WV    "<<(t_contr_vw)/1.0e6<< " seconds "  << std::endl;
-
-    double t_kernel = t_contr_vwm;
-    LOG(Message) << " Arith "<<flops/(t_kernel)/1.0e3/nodes<< " Gflop/s / node "  << std::endl;
-    LOG(Message) << " Arith "<<bytes/(t_kernel)/1.0e3/nodes<< " GB/s /node "  << std::endl;
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build the pion correlator (two end)
-    // < PI_ij(t0) PI_ji (t0+t) >
-    /////////////////////////////////////////////////////////////////////////
-    std::vector<ComplexD> corrMom(nt,ComplexD(0.0));
-
-    for(int i=0;i<N_i;i++){
-    for(int j=0;j<N_j;j++){
-      int m=0; // first momentum
-      for(int t0=0;t0<nt;t0++){
-      for(int t=0;t<nt;t++){
-	int tt = (t0+t)%nt;
-	corrMom[t] += pionFieldWVmom_ij(m,t0,i,j)* pionFieldWVmom_ji(m,tt,j,i);
-      }}
-    }}    
-    for(int t=0;t<nt;t++) corrMom[t] = corrMom[t]/ (double)nt;
-
-    for(int t=0;t<nt;t++) LOG(Message) << " C_vwm " << t << " " << corrMom[t]<<std::endl;
-
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build the pion correlator (two end) from zero mom contraction
-    // < PI_ij(t0) PI_ji (t0+t) >
-    /////////////////////////////////////////////////////////////////////////
-    std::vector<ComplexD> corr(nt,ComplexD(0.0));
-
-    for(int i=0;i<N_i;i++){
-    for(int j=0;j<N_j;j++){
-      for(int t0=0;t0<nt;t0++){
-      for(int t=0;t<nt;t++){
-	int tt = (t0+t)%nt;
-	corr[t] += pionFieldWV_ij(t0,i,j)* pionFieldWV_ji(tt,j,i);
-      }}
-    }}    
-    for(int t=0;t<nt;t++) corr[t] = corr[t]/ (double)nt;
-
-    for(int t=0;t<nt;t++) LOG(Message) << " C_vw " << t << " " << corr[t]<<std::endl;
-
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build the pion correlator from zero mom contraction with revers 
-    // charge flow
-    /////////////////////////////////////////////////////////////////////////
-    std::vector<ComplexD> corr_wwvv(nt,ComplexD(0.0));
-
-    wi.resize(N_i,grid);
-    vi.resize(N_i,grid);
-    wj.resize(N_j,grid);
-    vj.resize(N_j,grid);
-
-    for(int i =0;i < N_i;i++) a2a_i.return_v(i, tmp_5d, vi[i]);
-    for(int i =0;i < N_i;i++) a2a_i.return_w(i, tmp_5d, wi[i]);
-    for(int j =0;j < N_j;j++) a2a_j.return_v(j, tmp_5d, vj[j]);
-    for(int j =0;j < N_j;j++) a2a_j.return_w(j, tmp_5d, wj[j]);
-
-    Eigen::Tensor<ComplexD,3> pionFieldWW_ij        (nt,N_i,N_j);    
-    Eigen::Tensor<ComplexD,3> pionFieldVV_ji        (nt,N_j,N_i);    
-    Eigen::Tensor<ComplexD,3> pionFieldWW_ji        (nt,N_j,N_i);    
-    Eigen::Tensor<ComplexD,3> pionFieldVV_ij        (nt,N_i,N_j);    
-
-    A2Autils<FImpl>::PionFieldWW(pionFieldWW_ij, &wi[0], &wj[0],Tp);
-    A2Autils<FImpl>::PionFieldVV(pionFieldVV_ji, &vj[0], &vi[0],Tp);
-    A2Autils<FImpl>::PionFieldWW(pionFieldWW_ji, &wj[0], &wi[0],Tp);
-    A2Autils<FImpl>::PionFieldVV(pionFieldVV_ij, &vi[0], &vj[0],Tp);
-
-
-    for(int i=0;i<N_i;i++){
-    for(int j=0;j<N_j;j++){
-      for(int t0=0;t0<nt;t0++){
-      for(int t=0;t<nt;t++){
-	int tt = (t0+t)%nt;
-	corr_wwvv[t] += pionFieldWW_ij(t0,i,j)* pionFieldVV_ji(tt,j,i);
-	corr_wwvv[t] += pionFieldWW_ji(t0,j,i)* pionFieldVV_ij(tt,i,j);
-      }}
-    }}    
-    for(int t=0;t<nt;t++) corr_wwvv[t] = corr_wwvv[t] / vol /2.0 ; // (ij+ji noise contribs if i!=j ).
-
-    for(int t=0;t<nt;t++) LOG(Message) << " C_wwvv " << t << " " << corr_wwvv[t]<<std::endl;
-
-
-    /////////////////////////////////////////////////////////////////////////
-    // This is only correct if there are NO low modes
-    // Use the "ii" case to construct possible Z wall source one end trick
-    /////////////////////////////////////////////////////////////////////////
-    std::vector<ComplexD> corr_z2(nt,ComplexD(0.0));
-    Eigen::Tensor<ComplexD,3> pionFieldWW        (nt,N_i,N_i);    
-    Eigen::Tensor<ComplexD,3> pionFieldVV        (nt,N_i,N_i);    
-
-
-    A2Autils<FImpl>::PionFieldWW(pionFieldWW, &wi[0], &wi[0],Tp);
-    A2Autils<FImpl>::PionFieldVV(pionFieldVV, &vi[0], &vi[0],Tp);
-    for(int i=0;i<N_i;i++){
-      for(int t0=0;t0<nt;t0++){
-      for(int t=0;t<nt;t++){
-	int tt = (t0+t)%nt;
-	corr_z2[t] += pionFieldWW(t0,i,i) * pionFieldVV(tt,i,i) /vol ;
-      }}
-    }
-
-    LOG(Message) << " C_z2 WARNING only correct if Nl == 0 "<<std::endl;
-    for(int t=0;t<nt;t++) LOG(Message) << " C_z2 " << t << " " << corr_z2[t]<<std::endl;
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build a bag contraction
-    /////////////////////////////////////////////////////////////////////////
-    Eigen::Tensor<ComplexD,2> DeltaF2_fig8  (nt,16);
-    Eigen::Tensor<ComplexD,2> DeltaF2_trtr  (nt,16);
-    Eigen::Tensor<ComplexD,1> denom0 (nt);
-    Eigen::Tensor<ComplexD,1> denom1 (nt);
-    
-    const int dT=16;
-
-    A2Autils<FImpl>::DeltaFeq2  (dT,dT,DeltaF2_fig8,DeltaF2_trtr,
-				 denom0,denom1,
-				 pionFieldWW_ij,&vi[0],&vj[0],Tp);
-    
-    { 
-      int g=0; // O_{VV+AA}
-      for(int t=0;t<nt;t++)
-	LOG(Message) << " Bag [" << t << ","<<g<<"]  " 
-		     << (DeltaF2_fig8(t,g)+DeltaF2_trtr(t,g)) 
-	  /             ( 8.0/3.0 * denom0[t]*denom1[t])
-		     <<std::endl;
-    }
-
-    /////////////////////////////////////////////////////////////////////////
-    // Test: Build a bag contraction the Z2 way
-    // Build a wall bag comparison assuming no low modes
-    /////////////////////////////////////////////////////////////////////////
-    LOG(Message) << " Bag_z2 WARNING only correct if Nl == 0 "<<std::endl;
-
-    int t0=0;
-    int t1=dT;
-    int Nl=0;
-    LatticePropagator Qd0(grid);
-    LatticePropagator Qd1(grid);
-    LatticePropagator Qs0(grid);
-    LatticePropagator Qs1(grid);
-    for(int s=0;s<4;s++){
-      for(int c=0;c<3;c++){
-	int idx0 = Nl+t0*12+s*3+c;
-	int idx1 = Nl+t1*12+s*3+c;
-	FermToProp<FImpl>(Qd0, vi[idx0], s, c);
-	FermToProp<FImpl>(Qd1, vi[idx1], s, c);
-	FermToProp<FImpl>(Qs0, vj[idx0], s, c);
-	FermToProp<FImpl>(Qs1, vj[idx1], s, c);
-      }
-    }
-
-    std::vector<Gamma::Algebra> gammas ( {
-	  Gamma::Algebra::GammaX,
-	  Gamma::Algebra::GammaY,
-	  Gamma::Algebra::GammaZ,
-	  Gamma::Algebra::GammaT,
-	  Gamma::Algebra::GammaXGamma5,
-	  Gamma::Algebra::GammaYGamma5,
-	  Gamma::Algebra::GammaZGamma5,
-	  Gamma::Algebra::GammaTGamma5,
-	  Gamma::Algebra::Identity,    
-          Gamma::Algebra::Gamma5,
-	  Gamma::Algebra::SigmaXY,
-	  Gamma::Algebra::SigmaXZ,
-	  Gamma::Algebra::SigmaXT,
-	  Gamma::Algebra::SigmaYZ,
-	  Gamma::Algebra::SigmaYT,
-	  Gamma::Algebra::SigmaZT
-    });
-
-    auto G5 = Gamma::Algebra::Gamma5;
-    LatticePropagator anti_d0 =  adj( Gamma(G5) * Qd0 * Gamma(G5));
-    LatticePropagator anti_d1 =  adj( Gamma(G5) * Qd1 * Gamma(G5));
-    LatticeComplex TR1(grid);
-    LatticeComplex TR2(grid);
-    LatticeComplex Wick1(grid);
-    LatticeComplex Wick2(grid);
-
-    LatticePropagator PR1(grid);
-    LatticePropagator PR2(grid);
-    PR1 = Qs0 * Gamma(G5) * anti_d0;
-    PR2 = Qs1 * Gamma(G5) * anti_d1;
-
-    for(int g=0;g<Nd*Nd;g++){
-      auto g1 = gammas[g];
-      Gamma G1 (g1);
-      TR1 = trace( PR1 * G1 );
-      TR2 = trace( PR2 * G1 );
-      Wick1 = TR1*TR2;
-      Wick2 = trace( PR1* G1 * PR2 * G1 );
-      
-      std::vector<TComplex>  C1;
-      std::vector<TComplex>  C2;
-      std::vector<TComplex>  C3;
-      sliceSum(Wick1,C1, Tp);
-      sliceSum(Wick2,C2, Tp);
-      sliceSum(TR1  ,C3, Tp);
-      
-      /*
-      if(g<5){
-	for(int t=0;t<C1.size();t++){
-	  LOG(Message) << " Wick1["<<g<<","<<t<< "] "<< C1[t]<<std::endl; 
-	}
-	for(int t=0;t<C2.size();t++){
-	  LOG(Message) << " Wick2["<<g<<","<<t<< "] "<< C2[t]<<std::endl; 
-	}
-      }
-      if( (g==9) || (g==7) ){ // P and At in above ordering
-	for(int t=0;t<C3.size();t++){
-	  LOG(Message) << " <G|P>["<<g<<","<<t<< "] "<< C3[t]<<std::endl; 
-	}
-      } 
-      */
-    }
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MContraction_A2APionField_hpp_
-  

extras/Hadrons/Modules/MContraction/Baryon.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MContraction/Baryon.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MContraction/Baryon.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TBaryon<FIMPL,FIMPL,FIMPL>;
-

extras/Hadrons/Modules/MContraction/Baryon.hpp

@@ -68,7 +68,7 @@ public:
     // constructor
     TBaryon(const std::string name);
     // destructor
-    virtual ~TBaryon(void) {};
+    virtual ~TBaryon(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -79,7 +79,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(Baryon, ARG(TBaryon<FIMPL, FIMPL, FIMPL>), MContraction);
+MODULE_REGISTER_NS(Baryon, ARG(TBaryon<FIMPL, FIMPL, FIMPL>), MContraction);
 
 /******************************************************************************
  *                         TBaryon implementation                             *
@@ -122,6 +122,7 @@ void TBaryon<FImpl1, FImpl2, FImpl3>::execute(void)
                  << " quarks '" << par().q1 << "', '" << par().q2 << "', and '"
                  << par().q3 << "'" << std::endl;
     
+    ResultWriter writer(RESULT_FILE_NAME(par().output));
     auto       &q1 = envGet(PropagatorField1, par().q1);
     auto       &q2 = envGet(PropagatorField2, par().q2);
     auto       &q3 = envGet(PropagatorField3, par().q2);
@@ -130,7 +131,7 @@ void TBaryon<FImpl1, FImpl2, FImpl3>::execute(void)
     
     // FIXME: do contractions
     
-    // saveResult(par().output, "meson", result);
+    // write(writer, "meson", result);
 }
 
 END_MODULE_NAMESPACE

extras/Hadrons/Modules/MContraction/DiscLoop.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MContraction/DiscLoop.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MContraction/DiscLoop.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TDiscLoop<FIMPL>;
-

extras/Hadrons/Modules/MContraction/DiscLoop.hpp

@@ -65,7 +65,7 @@ public:
     // constructor
     TDiscLoop(const std::string name);
     // destructor
-    virtual ~TDiscLoop(void) {};
+    virtual ~TDiscLoop(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -76,7 +76,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(DiscLoop, TDiscLoop<FIMPL>, MContraction);
+MODULE_REGISTER_NS(DiscLoop, TDiscLoop<FIMPL>, MContraction);
 
 /******************************************************************************
  *                       TDiscLoop implementation                             *
@@ -119,6 +119,7 @@ void TDiscLoop<FImpl>::execute(void)
                  << "' using '" << par().q_loop << "' with " << par().gamma 
                  << " insertion." << std::endl;
 
+    ResultWriter          writer(RESULT_FILE_NAME(par().output));
     auto                  &q_loop = envGet(PropagatorField, par().q_loop);
     Gamma                 gamma(par().gamma);
     std::vector<TComplex> buf;
@@ -127,13 +128,15 @@ void TDiscLoop<FImpl>::execute(void)
     envGetTmp(LatticeComplex, c);
     c = trace(gamma*q_loop);
     sliceSum(c, buf, Tp);
+
     result.gamma = par().gamma;
     result.corr.resize(buf.size());
     for (unsigned int t = 0; t < buf.size(); ++t)
     {
         result.corr[t] = TensorRemove(buf[t]);
     }
-    saveResult(par().output, "disc", result);
+
+    write(writer, "disc", result);
 }
 
 END_MODULE_NAMESPACE

extras/Hadrons/Modules/MContraction/Gamma3pt.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MContraction/Gamma3pt.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MContraction/Gamma3pt.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TGamma3pt<FIMPL,FIMPL,FIMPL>;
-

extras/Hadrons/Modules/MContraction/Gamma3pt.hpp

@@ -96,7 +96,7 @@ public:
     // constructor
     TGamma3pt(const std::string name);
     // destructor
-    virtual ~TGamma3pt(void) {};
+    virtual ~TGamma3pt(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -107,7 +107,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(Gamma3pt, ARG(TGamma3pt<FIMPL, FIMPL, FIMPL>), MContraction);
+MODULE_REGISTER_NS(Gamma3pt, ARG(TGamma3pt<FIMPL, FIMPL, FIMPL>), MContraction);
 
 /******************************************************************************
  *                       TGamma3pt implementation                             *
@@ -153,6 +153,7 @@ void TGamma3pt<FImpl1, FImpl2, FImpl3>::execute(void)
 
     // Initialise variables. q2 and q3 are normal propagators, q1 may be 
     // sink smeared.
+    ResultWriter          writer(RESULT_FILE_NAME(par().output));
     auto                  &q1 = envGet(SlicedPropagator1, par().q1);
     auto                  &q2 = envGet(PropagatorField2, par().q2);
     auto                  &q3 = envGet(PropagatorField2, par().q3);
@@ -174,7 +175,8 @@ void TGamma3pt<FImpl1, FImpl2, FImpl3>::execute(void)
     {
         result.corr[t] = TensorRemove(buf[t]);
     }
-    saveResult(par().output, "gamma3pt", result);
+
+    write(writer, "gamma3pt", result);
 }
 
 END_MODULE_NAMESPACE

extras/Hadrons/Modules/MContraction/Meson.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MContraction/Meson.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MContraction/Meson.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TMeson<FIMPL,FIMPL>;
-

extras/Hadrons/Modules/MContraction/Meson.hpp

@@ -45,8 +45,8 @@ BEGIN_HADRONS_NAMESPACE
  - q1: input propagator 1 (string)
  - q2: input propagator 2 (string)
  - gammas: gamma products to insert at sink & source, pairs of gamma matrices 
-           (space-separated strings) in round brackets (i.e. (g_sink g_src)),
-           in a sequence (e.g. "(Gamma5 Gamma5)(Gamma5 GammaT)").
+           (space-separated strings) in angled brackets (i.e. <g_sink g_src>),
+           in a sequence (e.g. "<Gamma5 Gamma5><Gamma5 GammaT>").
 
            Special values: "all" - perform all possible contractions.
  - sink: module to compute the sink to use in contraction (string).
@@ -90,7 +90,7 @@ public:
     // constructor
     TMeson(const std::string name);
     // destructor
-    virtual ~TMeson(void) {};
+    virtual ~TMeson(void) = default;
     // dependencies/products
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -102,7 +102,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(Meson, ARG(TMeson<FIMPL, FIMPL>), MContraction);
+MODULE_REGISTER_NS(Meson, ARG(TMeson<FIMPL, FIMPL>), MContraction);
 
 /******************************************************************************
  *                           TMeson implementation                            *
@@ -172,6 +172,7 @@ void TMeson<FImpl1, FImpl2>::execute(void)
                  << " quarks '" << par().q1 << "' and '" << par().q2 << "'"
                  << std::endl;
 
+    ResultWriter           writer(RESULT_FILE_NAME(par().output));
     std::vector<TComplex>  buf;
     std::vector<Result>    result;
     Gamma                  g5(Gamma::Algebra::Gamma5);
@@ -238,7 +239,7 @@ void TMeson<FImpl1, FImpl2>::execute(void)
             }
         }
     }
-    saveResult(par().output, "meson", result);
+    write(writer, "meson", result);
 }
 
 END_MODULE_NAMESPACE

extras/Hadrons/Modules/MContraction/MesonFieldGamma.cc

@@ -1,8 +0,0 @@
-#include <Grid/Hadrons/Modules/MContraction/MesonFieldGamma.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TMesonFieldGamma<FIMPL>;
-template class Grid::Hadrons::MContraction::TMesonFieldGamma<ZFIMPL>;

extras/Hadrons/Modules/MContraction/MesonFieldGamma.hpp

@@ -1,269 +0,0 @@
-#ifndef Hadrons_MContraction_MesonFieldGamma_hpp_
-#define Hadrons_MContraction_MesonFieldGamma_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/AllToAllVectors.hpp>
-#include <Grid/Hadrons/AllToAllReduction.hpp>
-#include <Grid/Grid_Eigen_Dense.h>
-#include <fstream>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         MesonFieldGamma                                 *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MContraction)
-
-class MesonFieldPar : Serializable
-{
-  public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(MesonFieldPar,
-                                    int, Nl,
-                                    int, N,
-                                    int, Nblock,
-                                    std::string, A2A1,
-                                    std::string, A2A2,
-                                    std::string, gammas,
-                                    std::string, output);
-};
-
-template <typename FImpl>
-class TMesonFieldGamma : public Module<MesonFieldPar>
-{
-  public:
-    FERM_TYPE_ALIASES(FImpl, );
-    SOLVER_TYPE_ALIASES(FImpl, );
-
-    typedef A2AModesSchurDiagTwo<typename FImpl::FermionField, FMat, Solver> A2ABase;
-
-    class Result : Serializable
-    {
-      public:
-        GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
-                                        Gamma::Algebra, gamma,
-                                        std::vector<std::vector<std::vector<ComplexD>>>, MesonField);
-    };
-
-  public:
-    // constructor
-    TMesonFieldGamma(const std::string name);
-    // destructor
-    virtual ~TMesonFieldGamma(void){};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    virtual void parseGammaString(std::vector<Gamma::Algebra> &gammaList);
-    virtual void vectorOfWs(std::vector<FermionField> &w, int i, int Nblock, FermionField &tmpw_5d, std::vector<FermionField> &vec_w);
-    virtual void vectorOfVs(std::vector<FermionField> &v, int j, int Nblock, FermionField &tmpv_5d, std::vector<FermionField> &vec_v);
-    virtual void gammaMult(std::vector<FermionField> &v, Gamma gamma);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER(MesonFieldGamma, ARG(TMesonFieldGamma<FIMPL>), MContraction);
-MODULE_REGISTER(ZMesonFieldGamma, ARG(TMesonFieldGamma<ZFIMPL>), MContraction);
-
-/******************************************************************************
-*                  TMesonFieldGamma implementation                             *
-******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TMesonFieldGamma<FImpl>::TMesonFieldGamma(const std::string name)
-    : Module<MesonFieldPar>(name)
-{
-}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TMesonFieldGamma<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().A2A1 + "_class", par().A2A2 + "_class"};
-    in.push_back(par().A2A1 + "_w_high_4d");
-    in.push_back(par().A2A2 + "_v_high_4d");
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TMesonFieldGamma<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {};
-
-    return out;
-}
-
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::parseGammaString(std::vector<Gamma::Algebra> &gammaList)
-{
-    gammaList.clear();
-    // Determine gamma matrices to insert at source/sink.
-    if (par().gammas.compare("all") == 0)
-    {
-        // Do all contractions.
-        for (unsigned int i = 1; i < Gamma::nGamma; i += 2)
-        {
-            gammaList.push_back(((Gamma::Algebra)i));
-        }
-    }
-    else
-    {
-        // Parse individual contractions from input string.
-        gammaList = strToVec<Gamma::Algebra>(par().gammas);
-    }
-}
-
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::vectorOfWs(std::vector<FermionField> &w, int i, int Nblock, FermionField &tmpw_5d, std::vector<FermionField> &vec_w)
-{
-    for (unsigned int ni = 0; ni < Nblock; ni++)
-    {
-        vec_w[ni] = w[i + ni];
-    }
-}
-
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::vectorOfVs(std::vector<FermionField> &v, int j, int Nblock, FermionField &tmpv_5d, std::vector<FermionField> &vec_v)
-{
-    for (unsigned int nj = 0; nj < Nblock; nj++)
-    {
-        vec_v[nj] = v[j+nj];
-    }
-}
-
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::gammaMult(std::vector<FermionField> &v, Gamma gamma)
-{
-    int Nblock = v.size();
-    for (unsigned int nj = 0; nj < Nblock; nj++)
-    {
-        v[nj] = gamma * v[nj];
-    }
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::setup(void)
-{
-    int nt = env().getDim(Tp);
-    int N = par().N;
-    int Nblock = par().Nblock;
-
-    int Ls_ = env().getObjectLs(par().A2A1 + "_class");
-
-    envTmpLat(FermionField, "tmpv_5d", Ls_);
-    envTmpLat(FermionField, "tmpw_5d", Ls_);
-
-    envTmp(std::vector<FermionField>, "w", 1, N, FermionField(env().getGrid(1)));
-    envTmp(std::vector<FermionField>, "v", 1, N, FermionField(env().getGrid(1)));
-
-    envTmp(Eigen::MatrixXcd, "MF", 1, Eigen::MatrixXcd::Zero(nt, N * N));
-
-    envTmp(std::vector<FermionField>, "w_block", 1, Nblock, FermionField(env().getGrid(1)));
-    envTmp(std::vector<FermionField>, "v_block", 1, Nblock, FermionField(env().getGrid(1)));
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TMesonFieldGamma<FImpl>::execute(void)
-{
-    LOG(Message) << "Computing A2A meson field for gamma = " << par().gammas << ", taking w from " << par().A2A1 << " and v from " << par().A2A2 << std::endl;
-
-    int N = par().N;
-    int nt = env().getDim(Tp);
-    int Nblock = par().Nblock;
-
-    std::vector<Result> result;
-    std::vector<Gamma::Algebra> gammaResultList;
-    std::vector<Gamma> gammaList;
-
-    parseGammaString(gammaResultList);
-    result.resize(gammaResultList.size());
-
-    Gamma g5(Gamma::Algebra::Gamma5);
-    gammaList.resize(gammaResultList.size(), g5);
-
-    for (unsigned int i = 0; i < result.size(); ++i)
-    {
-        result[i].gamma = gammaResultList[i];
-        result[i].MesonField.resize(N, std::vector<std::vector<ComplexD>>(N, std::vector<ComplexD>(nt)));
-
-        Gamma gamma(gammaResultList[i]);
-        gammaList[i] = gamma;
-    }
-
-    auto &a2a1 = envGet(A2ABase, par().A2A1 + "_class");
-    auto &a2a2 = envGet(A2ABase, par().A2A2 + "_class");
-
-    envGetTmp(FermionField, tmpv_5d);
-    envGetTmp(FermionField, tmpw_5d);
-
-    envGetTmp(std::vector<FermionField>, v);
-    envGetTmp(std::vector<FermionField>, w);
-    LOG(Message) << "Finding v and w vectors for N =  " << N << std::endl;
-    for (int i = 0; i < N; i++)
-    {
-        a2a2.return_v(i, tmpv_5d, v[i]);
-        a2a1.return_w(i, tmpw_5d, w[i]);
-    }
-    LOG(Message) << "Found v and w vectors for N =  " << N << std::endl;
-
-    std::vector<std::vector<ComplexD>> MesonField_ij;
-    LOG(Message) << "Before blocked MFs, Nblock = " << Nblock << std::endl;
-    envGetTmp(std::vector<FermionField>, v_block);
-    envGetTmp(std::vector<FermionField>, w_block);
-    MesonField_ij.resize(Nblock * Nblock, std::vector<ComplexD>(nt));
-
-    envGetTmp(Eigen::MatrixXcd, MF);
-
-    LOG(Message) << "Before blocked MFs, Nblock = " << Nblock << std::endl;
-    for (unsigned int i = 0; i < N; i += Nblock)
-    {
-        vectorOfWs(w, i, Nblock, tmpw_5d, w_block);
-        for (unsigned int j = 0; j < N; j += Nblock)
-        {
-            vectorOfVs(v, j, Nblock, tmpv_5d, v_block);
-            for (unsigned int k = 0; k < result.size(); k++)
-            {
-                gammaMult(v_block, gammaList[k]);
-                sliceInnerProductMesonField(MesonField_ij, w_block, v_block, Tp);
-                for (unsigned int nj = 0; nj < Nblock; nj++)
-                {
-                    for (unsigned int ni = 0; ni < Nblock; ni++)
-                    {
-                        MF.col((i + ni) + (j + nj) * N) = Eigen::VectorXcd::Map(&MesonField_ij[nj * Nblock + ni][0], MesonField_ij[nj * Nblock + ni].size());
-                    }
-                }
-            }
-        }
-        if (i % 10 == 0)
-        {
-            LOG(Message) << "MF for i = " << i << " of " << N << std::endl;
-        }
-    }
-    LOG(Message) << "Before Global sum, Nblock = " << Nblock << std::endl;
-    v_block[0]._grid->GlobalSumVector(MF.data(), MF.size());
-    LOG(Message) << "After Global sum, Nblock = " << Nblock << std::endl;
-    for (unsigned int i = 0; i < N; i++)
-    {
-        for (unsigned int j = 0; j < N; j++)
-        {
-            for (unsigned int k = 0; k < result.size(); k++)
-            {
-                for (unsigned int t = 0; t < nt; t++)
-                {
-                    result[k].MesonField[i][j][t] = MF.col(i + N * j)[t];
-                }
-            }
-        }
-    }
-    saveResult(par().output, "meson", result);
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MContraction_MesonFieldGm_hpp_

extras/Hadrons/Modules/MContraction/WardIdentity.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MContraction/WardIdentity.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MContraction/WardIdentity.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MContraction;
-
-template class Grid::Hadrons::MContraction::TWardIdentity<FIMPL>;
-

extras/Hadrons/Modules/MContraction/WardIdentity.hpp

@@ -71,7 +71,7 @@ public:
     // constructor
     TWardIdentity(const std::string name);
     // destructor
-    virtual ~TWardIdentity(void) {};
+    virtual ~TWardIdentity(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -84,7 +84,7 @@ private:
     unsigned int Ls_;
 };
 
-MODULE_REGISTER_TMP(WardIdentity, TWardIdentity<FIMPL>, MContraction);
+MODULE_REGISTER_NS(WardIdentity, TWardIdentity<FIMPL>, MContraction);
 
 /******************************************************************************
  *                     TWardIdentity implementation                           *
@@ -119,7 +119,7 @@ void TWardIdentity<FImpl>::setup(void)
     Ls_ = env().getObjectLs(par().q);
     if (Ls_ != env().getObjectLs(par().action))
     {
-        HADRONS_ERROR(Size, "Ls mismatch between quark action and propagator");
+        HADRON_ERROR(Size, "Ls mismatch between quark action and propagator");
     }
     envTmpLat(PropagatorField, "tmp");
     envTmpLat(PropagatorField, "vector_WI");

extras/Hadrons/Modules/MContraction/WeakHamiltonian.hpp

@@ -97,7 +97,7 @@ public:\
     /* constructor */ \
     T##modname(const std::string name);\
     /* destructor */ \
-    virtual ~T##modname(void) {};\
+    virtual ~T##modname(void) = default;\
     /* dependency relation */ \
     virtual std::vector<std::string> getInput(void);\
     virtual std::vector<std::string> getOutput(void);\
@@ -109,7 +109,7 @@ protected:\
     /* execution */ \
     virtual void execute(void);\
 };\
-MODULE_REGISTER(modname, T##modname, MContraction);
+MODULE_REGISTER_NS(modname, T##modname, MContraction);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MContraction/WeakHamiltonianEye.cc

@@ -104,6 +104,7 @@ void TWeakHamiltonianEye::execute(void)
                  << par().q2 << ", '" << par().q3 << "' and '" << par().q4 
                  << "'." << std::endl;
 
+    ResultWriter           writer(RESULT_FILE_NAME(par().output));
     auto                   &q1 = envGet(SlicedPropagator, par().q1);
     auto                   &q2 = envGet(PropagatorField, par().q2);
     auto                   &q3 = envGet(PropagatorField, par().q3);
@@ -146,6 +147,5 @@ void TWeakHamiltonianEye::execute(void)
     SUM_MU(expbuf, E_body[mu]*E_loop[mu])
     MAKE_DIAG(expbuf, corrbuf, result[E_diag], "HW_E")
 
-    // IO
-    saveResult(par().output, "HW_Eye", result);
+    write(writer, "HW_Eye", result);
 }

extras/Hadrons/Modules/MContraction/WeakHamiltonianNonEye.cc

@@ -104,6 +104,7 @@ void TWeakHamiltonianNonEye::execute(void)
                  << par().q2 << ", '" << par().q3 << "' and '" << par().q4 
                  << "'." << std::endl;
     
+    ResultWriter          writer(RESULT_FILE_NAME(par().output));
     auto                  &q1 = envGet(PropagatorField, par().q1);
     auto                  &q2 = envGet(PropagatorField, par().q2);
     auto                  &q3 = envGet(PropagatorField, par().q3);
@@ -143,6 +144,5 @@ void TWeakHamiltonianNonEye::execute(void)
     SUM_MU(expbuf, W_i_side_loop[mu]*W_f_side_loop[mu])
     MAKE_DIAG(expbuf, corrbuf, result[W_diag], "HW_W")
 
-    // IO
-    saveResult(par().output, "HW_NonEye", result);
+    write(writer, "HW_NonEye", result);
 }

extras/Hadrons/Modules/MContraction/WeakNeutral4ptDisc.cc

@@ -104,6 +104,7 @@ void TWeakNeutral4ptDisc::execute(void)
                  << par().q2 << ", '" << par().q3 << "' and '" << par().q4 
                  << "'." << std::endl;
 
+    ResultWriter          writer(RESULT_FILE_NAME(par().output));
     auto                  &q1 = envGet(PropagatorField, par().q1);
     auto                  &q2 = envGet(PropagatorField, par().q2);
     auto                  &q3 = envGet(PropagatorField, par().q3);
@@ -137,6 +138,5 @@ void TWeakNeutral4ptDisc::execute(void)
     expbuf *= curr;
     MAKE_DIAG(expbuf, corrbuf, result[neut_disc_2_diag], "HW_disc0_2")
 
-    // IO
-    saveResult(par().output, "HW_disc0", result);
+    write(writer, "HW_disc0", result);
 }

extras/Hadrons/Modules/MFermion/FreeProp.cc

@@ -1,36 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MFermion/FreeProp.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-Author: Vera Guelpers <V.M.Guelpers@soton.ac.uk>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MFermion/FreeProp.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MFermion;
-
-template class Grid::Hadrons::MFermion::TFreeProp<FIMPL>;
-

extras/Hadrons/Modules/MFermion/FreeProp.hpp

@@ -1,187 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MFermion/FreeProp.hpp
-
-Copyright (C) 2015-2018
-
-Author: Vera Guelpers <V.M.Guelpers@soton.ac.uk>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-
-
-#ifndef Hadrons_MFermion_FreeProp_hpp_
-#define Hadrons_MFermion_FreeProp_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         FreeProp                                 *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MFermion)
-
-class FreePropPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(FreePropPar,
-                                    std::string, source,
-				    std::string,  action,
-				    double, mass,
-				    std::string,  twist);
-};
-
-template <typename FImpl>
-class TFreeProp: public Module<FreePropPar>
-{
-public:
-    FG_TYPE_ALIASES(FImpl,);
-public:
-    // constructor
-    TFreeProp(const std::string name);
-    // destructor
-    virtual ~TFreeProp(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-protected:
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-private:
-    unsigned int Ls_;
-};
-
-MODULE_REGISTER_TMP(FreeProp, TFreeProp<FIMPL>, MFermion);
-
-/******************************************************************************
- *                 TFreeProp implementation                             *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename FImpl>
-TFreeProp<FImpl>::TFreeProp(const std::string name)
-: Module<FreePropPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename FImpl>
-std::vector<std::string> TFreeProp<FImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().source, par().action};
-    
-    return in;
-}
-
-template <typename FImpl>
-std::vector<std::string> TFreeProp<FImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {getName(), getName() + "_5d"};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TFreeProp<FImpl>::setup(void)
-{
-    Ls_ = env().getObjectLs(par().action);
-    envCreateLat(PropagatorField, getName());
-    envTmpLat(FermionField, "source", Ls_);
-    envTmpLat(FermionField, "sol", Ls_);
-    envTmpLat(FermionField, "tmp");
-    if (Ls_ > 1)
-    {
-        envCreateLat(PropagatorField, getName() + "_5d", Ls_);
-    }    
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename FImpl>
-void TFreeProp<FImpl>::execute(void)
-{
-    LOG(Message) << "Computing free fermion propagator '" << getName() << "'"
-                 << std::endl;
-    
-    std::string propName = (Ls_ == 1) ? getName() : (getName() + "_5d");
-    auto        &prop    = envGet(PropagatorField, propName);
-    auto        &fullSrc = envGet(PropagatorField, par().source);
-    auto        &mat = envGet(FMat, par().action);
-    RealD mass = par().mass;
-    
-    envGetTmp(FermionField, source);
-    envGetTmp(FermionField, sol);
-    envGetTmp(FermionField, tmp);
-    LOG(Message) << "Calculating a free Propagator with mass " << mass 
-		 << " using the action '" << par().action
-                 << "' on source '" << par().source << "'" << std::endl;
-    for (unsigned int s = 0; s < Ns; ++s)
-      for (unsigned int c = 0; c < FImpl::Dimension; ++c)
-    {
-        LOG(Message) << "Calculation for spin= " << s << ", color= " << c
-                     << std::endl;
-        // source conversion for 4D sources
-        if (!env().isObject5d(par().source))
-        {
-            if (Ls_ == 1)
-            {
-               PropToFerm<FImpl>(source, fullSrc, s, c);
-            }
-            else
-            {
-                PropToFerm<FImpl>(tmp, fullSrc, s, c);
-                mat.ImportPhysicalFermionSource(tmp, source);
-            }
-        }
-        // source conversion for 5D sources
-        else
-        {
-            if (Ls_ != env().getObjectLs(par().source))
-            {
-                HADRONS_ERROR(Size, "Ls mismatch between quark action and source");
-            }
-            else
-            {
-                PropToFerm<FImpl>(source, fullSrc, s, c);
-            }
-        }
-        sol = zero;
-	std::vector<Real> twist = strToVec<Real>(par().twist);
-	if(twist.size() != Nd) HADRONS_ERROR(Size, "number of twist angles does not match number of dimensions");
-	mat.FreePropagator(source,sol,mass,twist);
-        FermToProp<FImpl>(prop, sol, s, c);
-        // create 4D propagators from 5D one if necessary
-        if (Ls_ > 1)
-        {
-            PropagatorField &p4d = envGet(PropagatorField, getName());
-            mat.ExportPhysicalFermionSolution(sol, tmp);
-            FermToProp<FImpl>(p4d, tmp, s, c);
-        }
-    }
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MFermion_FreeProp_hpp_

extras/Hadrons/Modules/MFermion/GaugeProp.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MFermion/GaugeProp.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MFermion/GaugeProp.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MFermion;
-
-template class Grid::Hadrons::MFermion::TGaugeProp<FIMPL>;
-template class Grid::Hadrons::MFermion::TGaugeProp<ZFIMPL>;

extras/Hadrons/Modules/MFermion/GaugeProp.hpp

@@ -7,9 +7,7 @@ Source file: extras/Hadrons/Modules/MFermion/GaugeProp.hpp
 Copyright (C) 2015-2018
 
 Author: Antonin Portelli <antonin.portelli@me.com>
-Author: Guido Cossu <guido.cossu@ed.ac.uk>
 Author: Lanny91 <andrew.lawson@gmail.com>
-Author: pretidav <david.preti@csic.es>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -35,10 +33,30 @@ See the full license in the file "LICENSE" in the top level distribution directo
 #include <Grid/Hadrons/Global.hpp>
 #include <Grid/Hadrons/Module.hpp>
 #include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/Solver.hpp>
 
 BEGIN_HADRONS_NAMESPACE
 
+/******************************************************************************
+ * 5D -> 4D and 4D -> 5D conversions.                                         *
+ ******************************************************************************/
+template<class vobj> // Note that 5D object is modified.
+inline void make_4D(Lattice<vobj> &in_5d, Lattice<vobj> &out_4d, int Ls)
+{
+    axpby_ssp_pminus(in_5d, 0., in_5d, 1., in_5d, 0, 0);
+    axpby_ssp_pplus(in_5d, 1., in_5d, 1., in_5d, 0, Ls-1);
+    ExtractSlice(out_4d, in_5d, 0, 0);
+}
+
+template<class vobj>
+inline void make_5D(Lattice<vobj> &in_4d, Lattice<vobj> &out_5d, int Ls)
+{
+    out_5d = zero;
+    InsertSlice(in_4d, out_5d, 0, 0);
+    InsertSlice(in_4d, out_5d, Ls-1, 0);
+    axpby_ssp_pplus(out_5d, 0., out_5d, 1., out_5d, 0, 0);
+    axpby_ssp_pminus(out_5d, 0., out_5d, 1., out_5d, Ls-1, Ls-1);
+}
+
 /******************************************************************************
  *                                GaugeProp                                   *
  ******************************************************************************/
@@ -56,13 +74,12 @@ template <typename FImpl>
 class TGaugeProp: public Module<GaugePropPar>
 {
 public:
-    FG_TYPE_ALIASES(FImpl,);
-    SOLVER_TYPE_ALIASES(FImpl,);
+    FGS_TYPE_ALIASES(FImpl,);
 public:
     // constructor
     TGaugeProp(const std::string name);
     // destructor
-    virtual ~TGaugeProp(void) {};
+    virtual ~TGaugeProp(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -73,12 +90,10 @@ protected:
     virtual void execute(void);
 private:
     unsigned int Ls_;
-    Solver       *solver_{nullptr};
+    SolverFn     *solver_{nullptr};
 };
 
-MODULE_REGISTER_TMP(GaugeProp, TGaugeProp<FIMPL>, MFermion);
-MODULE_REGISTER_TMP(ZGaugeProp, TGaugeProp<ZFIMPL>, MFermion);
-
+MODULE_REGISTER_NS(GaugeProp, TGaugeProp<FIMPL>, MFermion);
 /******************************************************************************
  *                      TGaugeProp implementation                             *
  ******************************************************************************/
@@ -130,8 +145,7 @@ void TGaugeProp<FImpl>::execute(void)
     std::string propName = (Ls_ == 1) ? getName() : (getName() + "_5d");
     auto        &prop    = envGet(PropagatorField, propName);
     auto        &fullSrc = envGet(PropagatorField, par().source);
-    auto        &solver  = envGet(Solver, par().solver);
-    auto        &mat     = solver.getFMat();
+    auto        &solver  = envGet(SolverFn, par().solver);
     
     envGetTmp(FermionField, source);
     envGetTmp(FermionField, sol);
@@ -144,7 +158,6 @@ void TGaugeProp<FImpl>::execute(void)
         LOG(Message) << "Inversion for spin= " << s << ", color= " << c
                      << std::endl;
         // source conversion for 4D sources
-        LOG(Message) << "Import source" << std::endl;
         if (!env().isObject5d(par().source))
         {
             if (Ls_ == 1)
@@ -154,7 +167,7 @@ void TGaugeProp<FImpl>::execute(void)
             else
             {
                 PropToFerm<FImpl>(tmp, fullSrc, s, c);
-                mat.ImportPhysicalFermionSource(tmp, source);
+                make_5D(tmp, source, Ls_);
             }
         }
         // source conversion for 5D sources
@@ -162,23 +175,21 @@ void TGaugeProp<FImpl>::execute(void)
         {
             if (Ls_ != env().getObjectLs(par().source))
             {
-                HADRONS_ERROR(Size, "Ls mismatch between quark action and source");
+                HADRON_ERROR(Size, "Ls mismatch between quark action and source");
             }
             else
             {
                 PropToFerm<FImpl>(source, fullSrc, s, c);
             }
         }
-        LOG(Message) << "Solve" << std::endl;
         sol = zero;
         solver(sol, source);
-        LOG(Message) << "Export solution" << std::endl;
         FermToProp<FImpl>(prop, sol, s, c);
         // create 4D propagators from 5D one if necessary
         if (Ls_ > 1)
         {
             PropagatorField &p4d = envGet(PropagatorField, getName());
-            mat.ExportPhysicalFermionSolution(sol, tmp);
+            make_4D(sol, tmp, Ls_);
             FermToProp<FImpl>(p4d, tmp, s, c);
         }
     }

extras/Hadrons/Modules/MGauge/FundtoHirep.cc

@@ -4,11 +4,9 @@ Grid physics library, www.github.com/paboyle/Grid
 
 Source file: extras/Hadrons/Modules/MGauge/FundtoHirep.cc
 
-Copyright (C) 2015-2018
+Copyright (C) 2015
+Copyright (C) 2016
 
-Author: Antonin Portelli <antonin.portelli@me.com>
-Author: Guido Cossu <guido.cossu@ed.ac.uk>
-Author: pretidav <david.preti@csic.es>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -44,8 +42,7 @@ TFundtoHirep<Rep>::TFundtoHirep(const std::string name)
 template <class Rep>
 std::vector<std::string> TFundtoHirep<Rep>::getInput(void)
 {
-    std::vector<std::string> in = {par().gaugeconf};
-
+    std::vector<std::string> in;
     return in;
 }
 
@@ -53,7 +50,6 @@ template <class Rep>
 std::vector<std::string> TFundtoHirep<Rep>::getOutput(void)
 {
     std::vector<std::string> out = {getName()};
-
     return out;
 }
 
@@ -61,19 +57,19 @@ std::vector<std::string> TFundtoHirep<Rep>::getOutput(void)
 template <typename Rep>
 void TFundtoHirep<Rep>::setup(void)
 {
-    envCreateLat(Rep::LatticeField, getName());
+    env().template registerLattice<typename Rep::LatticeField>(getName());
 }
 
 // execution ///////////////////////////////////////////////////////////////////
 template <class Rep>
 void TFundtoHirep<Rep>::execute(void)
 {
+    auto &U      = *env().template getObject<LatticeGaugeField>(par().gaugeconf);
     LOG(Message) << "Transforming Representation" << std::endl;
 
-    auto &U    = envGet(LatticeGaugeField, par().gaugeconf);
-    auto &URep = envGet(Rep::LatticeField, getName());
-
     Rep TargetRepresentation(U._grid);
     TargetRepresentation.update_representation(U);
+
+   typename Rep::LatticeField &URep = *env().template createLattice<typename Rep::LatticeField>(getName());
     URep = TargetRepresentation.U;
 }

extras/Hadrons/Modules/MGauge/FundtoHirep.hpp

@@ -4,10 +4,11 @@ Grid physics library, www.github.com/paboyle/Grid
 
 Source file: extras/Hadrons/Modules/MGauge/FundtoHirep.hpp
 
-Copyright (C) 2015-2018
+Copyright (C) 2015
+Copyright (C) 2016
 
-Author: Antonin Portelli <antonin.portelli@me.com>
-Author: pretidav <david.preti@csic.es>
+Author: David Preti <david.preti@to.infn.it>
+	Guido Cossu <guido.cossu@ed.ac.uk>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -55,7 +56,7 @@ public:
     // constructor
     TFundtoHirep(const std::string name);
     // destructor
-    virtual ~TFundtoHirep(void) {};
+    virtual ~TFundtoHirep(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -65,9 +66,9 @@ public:
     void execute(void);
 };
 
-//MODULE_REGISTER_TMP(FundtoAdjoint,   TFundtoHirep<AdjointRepresentation>, MGauge);
-//MODULE_REGISTER_TMP(FundtoTwoIndexSym, TFundtoHirep<TwoIndexSymmetricRepresentation>, MGauge);
-//MODULE_REGISTER_TMP(FundtoTwoIndexAsym, TFundtoHirep<TwoIndexAntiSymmetricRepresentation>, MGauge);
+//MODULE_REGISTER_NS(FundtoAdjoint,   TFundtoHirep<AdjointRepresentation>, MGauge);
+//MODULE_REGISTER_NS(FundtoTwoIndexSym, TFundtoHirep<TwoIndexSymmetricRepresentation>, MGauge);
+//MODULE_REGISTER_NS(FundtoTwoIndexAsym, TFundtoHirep<TwoIndexAntiSymmetricRepresentation>, MGauge);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MGauge/Random.hpp

@@ -46,7 +46,7 @@ public:
     // constructor
     TRandom(const std::string name);
     // destructor
-    virtual ~TRandom(void) {};
+    virtual ~TRandom(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -57,7 +57,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER(Random, TRandom, MGauge);
+MODULE_REGISTER_NS(Random, TRandom, MGauge);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MGauge/StochEm.cc

@@ -7,8 +7,6 @@ Source file: extras/Hadrons/Modules/MGauge/StochEm.cc
 Copyright (C) 2015-2018
 
 Author: Antonin Portelli <antonin.portelli@me.com>
-Author: James Harrison <j.harrison@soton.ac.uk>
-Author: Vera Guelpers <vmg1n14@soton.ac.uk>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -59,24 +57,25 @@ std::vector<std::string> TStochEm::getOutput(void)
 // setup ///////////////////////////////////////////////////////////////////////
 void TStochEm::setup(void)
 {
-    weightDone_ = env().hasCreatedObject("_" + getName() + "_weight");
+    if (!env().hasCreatedObject("_" + getName() + "_weight"))
+    {
         envCacheLat(EmComp, "_" + getName() + "_weight");
+    }
     envCreateLat(EmField, getName());
 }
 
 // execution ///////////////////////////////////////////////////////////////////
 void TStochEm::execute(void)
 {
-    LOG(Message) << "Generating stochastic EM potential..." << std::endl;
+    LOG(Message) << "Generating stochatic EM potential..." << std::endl;
 
-    std::vector<Real> improvements = strToVec<Real>(par().improvement);
-    PhotonR photon(par().gauge, par().zmScheme, improvements, par().G0_qedInf);
+    PhotonR photon(par().gauge, par().zmScheme);
     auto    &a = envGet(EmField, getName());
     auto    &w = envGet(EmComp, "_" + getName() + "_weight");
     
-    if (!weightDone_)
+    if (!env().hasCreatedObject("_" + getName() + "_weight"))
     {
-        LOG(Message) << "Caching stochastic EM potential weight (gauge: "
+        LOG(Message) << "Caching stochatic EM potential weight (gauge: "
                      << par().gauge << ", zero-mode scheme: "
                      << par().zmScheme << ")..." << std::endl;
         photon.StochasticWeight(w);

extras/Hadrons/Modules/MGauge/StochEm.hpp

@@ -7,8 +7,6 @@ Source file: extras/Hadrons/Modules/MGauge/StochEm.hpp
 Copyright (C) 2015-2018
 
 Author: Antonin Portelli <antonin.portelli@me.com>
-Author: James Harrison <j.harrison@soton.ac.uk>
-Author: Vera Guelpers <vmg1n14@soton.ac.uk>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -46,9 +44,7 @@ class StochEmPar: Serializable
 public:
     GRID_SERIALIZABLE_CLASS_MEMBERS(StochEmPar,
                                     PhotonR::Gauge,    gauge,
-                                    PhotonR::ZmScheme, zmScheme,
-                                    std::string,       improvement,
-                                    Real,              G0_qedInf);
+                                    PhotonR::ZmScheme, zmScheme);
 };
 
 class TStochEm: public Module<StochEmPar>
@@ -60,7 +56,7 @@ public:
     // constructor
     TStochEm(const std::string name);
     // destructor
-    virtual ~TStochEm(void) {};
+    virtual ~TStochEm(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -69,11 +65,9 @@ protected:
     virtual void setup(void);
     // execution
     virtual void execute(void);
-private:
-    bool    weightDone_;
 };
 
-MODULE_REGISTER(StochEm, TStochEm, MGauge);
+MODULE_REGISTER_NS(StochEm, TStochEm, MGauge);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MGauge/StoutSmearing.cc

@@ -1,7 +0,0 @@
-#include <Grid/Hadrons/Modules/MGauge/StoutSmearing.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MGauge;
-
-template class Grid::Hadrons::MGauge::TStoutSmearing<GIMPL>;

extras/Hadrons/Modules/MGauge/StoutSmearing.hpp

@@ -1,104 +0,0 @@
-#ifndef Hadrons_MGauge_StoutSmearing_hpp_
-#define Hadrons_MGauge_StoutSmearing_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                            Stout smearing                                  *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MGauge)
-
-class StoutSmearingPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(StoutSmearingPar,
-                                    std::string, gauge,
-                                    unsigned int, steps,
-                                    double, rho);
-};
-
-template <typename GImpl>
-class TStoutSmearing: public Module<StoutSmearingPar>
-{
-public:
-    typedef typename GImpl::Field GaugeField;
-public:
-    // constructor
-    TStoutSmearing(const std::string name);
-    // destructor
-    virtual ~TStoutSmearing(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(StoutSmearing, TStoutSmearing<GIMPL>, MGauge);
-
-/******************************************************************************
- *                     TStoutSmearing implementation                          *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename GImpl>
-TStoutSmearing<GImpl>::TStoutSmearing(const std::string name)
-: Module<StoutSmearingPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename GImpl>
-std::vector<std::string> TStoutSmearing<GImpl>::getInput(void)
-{
-    std::vector<std::string> in = {par().gauge};
-    
-    return in;
-}
-
-template <typename GImpl>
-std::vector<std::string> TStoutSmearing<GImpl>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename GImpl>
-void TStoutSmearing<GImpl>::setup(void)
-{
-    envCreateLat(GaugeField, getName());
-    envTmpLat(GaugeField, "buf");
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename GImpl>
-void TStoutSmearing<GImpl>::execute(void)
-{
-    LOG(Message) << "Smearing '" << par().gauge << "' with " << par().steps
-                 << " step" << ((par().steps > 1) ? "s" : "") 
-                 << " of stout smearing and rho= " << par().rho << std::endl;
-
-    Smear_Stout<GImpl> smearer(par().rho);
-    auto               &U    = envGet(GaugeField, par().gauge);
-    auto               &Usmr = envGet(GaugeField, getName());
-
-    envGetTmp(GaugeField, buf);
-    buf = U;
-    for (unsigned int n = 0; n < par().steps; ++n)
-    {
-        smearer.smear(Usmr, buf);
-        buf = Usmr;
-    }
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MGauge_StoutSmearing_hpp_

extras/Hadrons/Modules/MGauge/Unit.hpp

@@ -46,7 +46,7 @@ public:
     // constructor
     TUnit(const std::string name);
     // destructor
-    virtual ~TUnit(void) {};
+    virtual ~TUnit(void) = default;
     // dependencies/products
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -57,7 +57,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER(Unit, TUnit, MGauge);
+MODULE_REGISTER_NS(Unit, TUnit, MGauge);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MGauge/UnitEm.cc

@@ -1,69 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MGauge/StochEm.cc
-
-Copyright (C) 2015
-Copyright (C) 2016
-
-Author: James Harrison <j.harrison@soton.ac.uk>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MGauge/UnitEm.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MGauge;
-
-/******************************************************************************
-*                  TStochEm implementation                             *
-******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-TUnitEm::TUnitEm(const std::string name)
-: Module<NoPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-std::vector<std::string> TUnitEm::getInput(void)
-{
-    return std::vector<std::string>();
-}
-
-std::vector<std::string> TUnitEm::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-void TUnitEm::setup(void)
-{
-    envCreateLat(EmField, getName());
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-void TUnitEm::execute(void)
-{
-    PhotonR photon(0, 0); // Just chose arbitrary input values here
-    auto    &a = envGet(EmField, getName());
-    LOG(Message) << "Generating unit EM potential..." << std::endl;
-    photon.UnitField(a);
-}

extras/Hadrons/Modules/MGauge/UnitEm.hpp

@@ -1,69 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MGauge/StochEm.hpp
-
-Copyright (C) 2015
-Copyright (C) 2016
-
-Author: James Harrison <j.harrison@soton.ac.uk>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#ifndef Hadrons_MGauge_UnitEm_hpp_
-#define Hadrons_MGauge_UnitEm_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                         StochEm                                 *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MGauge)
-
-class TUnitEm: public Module<NoPar>
-{
-public:
-    typedef PhotonR::GaugeField     EmField;
-    typedef PhotonR::GaugeLinkField EmComp;
-public:
-    // constructor
-    TUnitEm(const std::string name);
-    // destructor
-    virtual ~TUnitEm(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-protected:
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER(UnitEm, TUnitEm, MGauge);
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MGauge_UnitEm_hpp_

extras/Hadrons/Modules/MIO/LoadBinary.cc

@@ -1,40 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MIO/LoadBinary.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MIO/LoadBinary.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MIO;
-
-template class Grid::Hadrons::MIO::TLoadBinary<GIMPL>;
-template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<2>>;
-template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<3>>;
-template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<4>>;
-template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<5>>;
-template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<6>>;
-

extras/Hadrons/Modules/MIO/LoadBinary.hpp

@@ -61,7 +61,7 @@ public:
     // constructor
     TLoadBinary(const std::string name);
     // destructor
-    virtual ~TLoadBinary(void) {};
+    virtual ~TLoadBinary(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -71,12 +71,12 @@ public:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(LoadBinary, TLoadBinary<GIMPL>, MIO);
-MODULE_REGISTER_TMP(LoadBinaryScalarSU2, TLoadBinary<ScalarNxNAdjImplR<2>>, MIO);
-MODULE_REGISTER_TMP(LoadBinaryScalarSU3, TLoadBinary<ScalarNxNAdjImplR<3>>, MIO);
-MODULE_REGISTER_TMP(LoadBinaryScalarSU4, TLoadBinary<ScalarNxNAdjImplR<4>>, MIO);
-MODULE_REGISTER_TMP(LoadBinaryScalarSU5, TLoadBinary<ScalarNxNAdjImplR<5>>, MIO);
-MODULE_REGISTER_TMP(LoadBinaryScalarSU6, TLoadBinary<ScalarNxNAdjImplR<6>>, MIO);
+MODULE_REGISTER_NS(LoadBinary, TLoadBinary<GIMPL>, MIO);
+MODULE_REGISTER_NS(LoadBinaryScalarSU2, TLoadBinary<ScalarNxNAdjImplR<2>>, MIO);
+MODULE_REGISTER_NS(LoadBinaryScalarSU3, TLoadBinary<ScalarNxNAdjImplR<3>>, MIO);
+MODULE_REGISTER_NS(LoadBinaryScalarSU4, TLoadBinary<ScalarNxNAdjImplR<4>>, MIO);
+MODULE_REGISTER_NS(LoadBinaryScalarSU5, TLoadBinary<ScalarNxNAdjImplR<5>>, MIO);
+MODULE_REGISTER_NS(LoadBinaryScalarSU6, TLoadBinary<ScalarNxNAdjImplR<6>>, MIO);
 
 /******************************************************************************
  *                         TLoadBinary implementation                         *

extras/Hadrons/Modules/MIO/LoadCoarseEigenPack.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MIO/LoadCoarseEigenPack.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MIO;
-
-template class Grid::Hadrons::MIO::TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL,HADRONS_DEFAULT_LANCZOS_NBASIS>>;
-

extras/Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp

@@ -1,135 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#ifndef Hadrons_MIO_LoadCoarseEigenPack_hpp_
-#define Hadrons_MIO_LoadCoarseEigenPack_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/EigenPack.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *              Load local coherence eigen vectors/values package             *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MIO)
-
-class LoadCoarseEigenPackPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(LoadCoarseEigenPackPar,
-                                    std::string, filestem,
-                                    bool,         multiFile,
-                                    unsigned int, sizeFine,
-                                    unsigned int, sizeCoarse,
-                                    unsigned int, Ls,
-                                    std::vector<int>, blockSize);
-};
-
-template <typename Pack>
-class TLoadCoarseEigenPack: public Module<LoadCoarseEigenPackPar>
-{
-public:
-    typedef CoarseEigenPack<typename Pack::Field, typename Pack::CoarseField> BasePack;
-    template <typename vtype> 
-    using iImplScalar = iScalar<iScalar<iScalar<vtype>>>;
-    typedef iImplScalar<typename Pack::Field::vector_type> SiteComplex;
-public:
-    // constructor
-    TLoadCoarseEigenPack(const std::string name);
-    // destructor
-    virtual ~TLoadCoarseEigenPack(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(LoadCoarseFermionEigenPack, ARG(TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL, HADRONS_DEFAULT_LANCZOS_NBASIS>>), MIO);
-
-/******************************************************************************
- *                 TLoadCoarseEigenPack implementation                             *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename Pack>
-TLoadCoarseEigenPack<Pack>::TLoadCoarseEigenPack(const std::string name)
-: Module<LoadCoarseEigenPackPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename Pack>
-std::vector<std::string> TLoadCoarseEigenPack<Pack>::getInput(void)
-{
-    std::vector<std::string> in;
-    
-    return in;
-}
-
-template <typename Pack>
-std::vector<std::string> TLoadCoarseEigenPack<Pack>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename Pack>
-void TLoadCoarseEigenPack<Pack>::setup(void)
-{
-    env().createGrid(par().Ls);
-    env().createCoarseGrid(par().blockSize, par().Ls);
-    envCreateDerived(BasePack, Pack, getName(), par().Ls, par().sizeFine,
-                     par().sizeCoarse, env().getRbGrid(par().Ls), 
-                     env().getCoarseGrid(par().blockSize, par().Ls));
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename Pack>
-void TLoadCoarseEigenPack<Pack>::execute(void)
-{
-    auto                 cg     = env().getCoarseGrid(par().blockSize, par().Ls);
-    auto                 &epack = envGetDerived(BasePack, Pack, getName());
-    Lattice<SiteComplex> dummy(cg);
-
-    epack.read(par().filestem, par().multiFile, vm().getTrajectory());
-    LOG(Message) << "Block Gramm-Schmidt pass 1"<< std::endl;
-    blockOrthogonalise(dummy, epack.evec);
-    LOG(Message) << "Block Gramm-Schmidt pass 2"<< std::endl;
-    blockOrthogonalise(dummy, epack.evec);
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MIO_LoadCoarseEigenPack_hpp_

extras/Hadrons/Modules/MIO/LoadEigenPack.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MIO/LoadEigenPack.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MIO/LoadEigenPack.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MIO;
-
-template class Grid::Hadrons::MIO::TLoadEigenPack<FermionEigenPack<FIMPL>>;
-

extras/Hadrons/Modules/MIO/LoadEigenPack.hpp

@@ -1,123 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MIO/LoadEigenPack.hpp
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#ifndef Hadrons_MIO_LoadEigenPack_hpp_
-#define Hadrons_MIO_LoadEigenPack_hpp_
-
-#include <Grid/Hadrons/Global.hpp>
-#include <Grid/Hadrons/Module.hpp>
-#include <Grid/Hadrons/ModuleFactory.hpp>
-#include <Grid/Hadrons/EigenPack.hpp>
-
-BEGIN_HADRONS_NAMESPACE
-
-/******************************************************************************
- *                   Load eigen vectors/values package                        *
- ******************************************************************************/
-BEGIN_MODULE_NAMESPACE(MIO)
-
-class LoadEigenPackPar: Serializable
-{
-public:
-    GRID_SERIALIZABLE_CLASS_MEMBERS(LoadEigenPackPar,
-                                    std::string, filestem,
-                                    bool, multiFile,
-                                    unsigned int, size,
-                                    unsigned int, Ls);
-};
-
-template <typename Pack>
-class TLoadEigenPack: public Module<LoadEigenPackPar>
-{
-public:
-    typedef EigenPack<typename Pack::Field> BasePack;
-public:
-    // constructor
-    TLoadEigenPack(const std::string name);
-    // destructor
-    virtual ~TLoadEigenPack(void) {};
-    // dependency relation
-    virtual std::vector<std::string> getInput(void);
-    virtual std::vector<std::string> getOutput(void);
-    // setup
-    virtual void setup(void);
-    // execution
-    virtual void execute(void);
-};
-
-MODULE_REGISTER_TMP(LoadFermionEigenPack, TLoadEigenPack<FermionEigenPack<FIMPL>>, MIO);
-
-/******************************************************************************
- *                    TLoadEigenPack implementation                           *
- ******************************************************************************/
-// constructor /////////////////////////////////////////////////////////////////
-template <typename Pack>
-TLoadEigenPack<Pack>::TLoadEigenPack(const std::string name)
-: Module<LoadEigenPackPar>(name)
-{}
-
-// dependencies/products ///////////////////////////////////////////////////////
-template <typename Pack>
-std::vector<std::string> TLoadEigenPack<Pack>::getInput(void)
-{
-    std::vector<std::string> in;
-    
-    return in;
-}
-
-template <typename Pack>
-std::vector<std::string> TLoadEigenPack<Pack>::getOutput(void)
-{
-    std::vector<std::string> out = {getName()};
-    
-    return out;
-}
-
-// setup ///////////////////////////////////////////////////////////////////////
-template <typename Pack>
-void TLoadEigenPack<Pack>::setup(void)
-{
-    env().createGrid(par().Ls);
-    envCreateDerived(BasePack, Pack, getName(), par().Ls, par().size, 
-                     env().getRbGrid(par().Ls));
-}
-
-// execution ///////////////////////////////////////////////////////////////////
-template <typename Pack>
-void TLoadEigenPack<Pack>::execute(void)
-{
-    auto &epack = envGetDerived(BasePack, Pack, getName());
-
-    epack.read(par().filestem, par().multiFile, vm().getTrajectory());
-    epack.eval.resize(par().size);
-}
-
-END_MODULE_NAMESPACE
-
-END_HADRONS_NAMESPACE
-
-#endif // Hadrons_MIO_LoadEigenPack_hpp_

extras/Hadrons/Modules/MIO/LoadNersc.cc

@@ -71,4 +71,6 @@ void TLoadNersc::execute(void)
 
     auto &U = envGet(LatticeGaugeField, getName());
     NerscIO::readConfiguration(U, header, fileName);
+    LOG(Message) << "NERSC header:" << std::endl;
+    dump_meta_data(header, LOG(Message));
 }

extras/Hadrons/Modules/MIO/LoadNersc.hpp

@@ -52,7 +52,7 @@ public:
     // constructor
     TLoadNersc(const std::string name);
     // destructor
-    virtual ~TLoadNersc(void) {};
+    virtual ~TLoadNersc(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -62,7 +62,7 @@ public:
     virtual void execute(void);
 };
 
-MODULE_REGISTER(LoadNersc, TLoadNersc, MIO);
+MODULE_REGISTER_NS(LoadNersc, TLoadNersc, MIO);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MLoop/NoiseLoop.cc

@@ -1,35 +0,0 @@
-/*************************************************************************************
-
-Grid physics library, www.github.com/paboyle/Grid 
-
-Source file: extras/Hadrons/Modules/MLoop/NoiseLoop.cc
-
-Copyright (C) 2015-2018
-
-Author: Antonin Portelli <antonin.portelli@me.com>
-
-This program is free software; you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation; either version 2 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License along
-with this program; if not, write to the Free Software Foundation, Inc.,
-51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
-
-See the full license in the file "LICENSE" in the top level distribution directory
-*************************************************************************************/
-/*  END LEGAL */
-#include <Grid/Hadrons/Modules/MLoop/NoiseLoop.hpp>
-
-using namespace Grid;
-using namespace Hadrons;
-using namespace MLoop;
-
-template class Grid::Hadrons::MLoop::TNoiseLoop<FIMPL>;
-

extras/Hadrons/Modules/MLoop/NoiseLoop.hpp

@@ -71,7 +71,7 @@ public:
     // constructor
     TNoiseLoop(const std::string name);
     // destructor
-    virtual ~TNoiseLoop(void) {};
+    virtual ~TNoiseLoop(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -82,7 +82,7 @@ protected:
     virtual void execute(void);
 };
 
-MODULE_REGISTER_TMP(NoiseLoop, TNoiseLoop<FIMPL>, MLoop);
+MODULE_REGISTER_NS(NoiseLoop, TNoiseLoop<FIMPL>, MLoop);
 
 /******************************************************************************
  *                 TNoiseLoop implementation                                  *

extras/Hadrons/Modules/MScalar/ChargedProp.cc

@@ -51,8 +51,7 @@ std::vector<std::string> TChargedProp::getInput(void)
 
 std::vector<std::string> TChargedProp::getOutput(void)
 {
-    std::vector<std::string> out = {getName(), getName()+"_0", getName()+"_Q",
-                                    getName()+"_Sun", getName()+"_Tad"};
+    std::vector<std::string> out = {getName()};
     
     return out;
 }
@@ -67,27 +66,18 @@ void TChargedProp::setup(void)
         phaseName_.push_back("_shiftphase_" + std::to_string(mu));
     }
     GFSrcName_ = getName() + "_DinvSrc";
-	prop0Name_ = getName() + "_0";
-    propQName_ = getName() + "_Q";
-    propSunName_ = getName() + "_Sun";
-    propTadName_ = getName() + "_Tad";
     fftName_   = getName() + "_fft";
 
     freeMomPropDone_ = env().hasCreatedObject(freeMomPropName_);
     GFSrcDone_       = env().hasCreatedObject(GFSrcName_);
     phasesDone_      = env().hasCreatedObject(phaseName_[0]);
-	prop0Done_		 = env().hasCreatedObject(prop0Name_);
     envCacheLat(ScalarField, freeMomPropName_);
     for (unsigned int mu = 0; mu < env().getNd(); ++mu)
     {
         envCacheLat(ScalarField, phaseName_[mu]);
     }
     envCacheLat(ScalarField, GFSrcName_);
-	envCacheLat(ScalarField, prop0Name_);
     envCreateLat(ScalarField, getName());
-    envCreateLat(ScalarField, propQName_);
-    envCreateLat(ScalarField, propSunName_);
-    envCreateLat(ScalarField, propTadName_);
     envTmpLat(ScalarField, "buf");
     envTmpLat(ScalarField, "result");
     envTmpLat(ScalarField, "Amu");
@@ -106,124 +96,79 @@ void TChargedProp::execute(void)
                  << ", charge= " << par().charge << ")..." << std::endl;
     
     auto   &prop  = envGet(ScalarField, getName());
-	auto   &prop0   = envGet(ScalarField, prop0Name_);
-	auto   &propQ   = envGet(ScalarField, propQName_);
-	auto   &propSun = envGet(ScalarField, propSunName_);
-	auto   &propTad = envGet(ScalarField, propTadName_);
     auto   &GFSrc = envGet(ScalarField, GFSrcName_);
     auto   &G     = envGet(ScalarField, freeMomPropName_);
     auto   &fft   = envGet(FFT, fftName_);
     double q      = par().charge;
+    envGetTmp(ScalarField, result); 
     envGetTmp(ScalarField, buf); 
 
-    // -G*momD1*G*F*Src (momD1 = F*D1*Finv)
-    propQ = GFSrc;
-    momD1(propQ, fft);
-    propQ = -G*propQ;
-    propSun = -propQ;
-    fft.FFT_dim(propQ, propQ, env().getNd()-1, FFT::backward);
+    // G*F*Src
+    prop = GFSrc;
 
-    // G*momD1*G*momD1*G*F*Src (here buf = G*momD1*G*F*Src)
-    momD1(propSun, fft);
-    propSun = G*propSun;
-    fft.FFT_dim(propSun, propSun, env().getNd()-1, FFT::backward);
+    // - q*G*momD1*G*F*Src (momD1 = F*D1*Finv)
+    buf = GFSrc;
+    momD1(buf, fft);
+    buf = G*buf;
+    prop = prop - q*buf;
 
-    // -G*momD2*G*F*Src (momD2 = F*D2*Finv)
-    propTad = GFSrc;
-    momD2(propTad, fft);
-    propTad = -G*propTad;
-    fft.FFT_dim(propTad, propTad, env().getNd()-1, FFT::backward);
+    // + q^2*G*momD1*G*momD1*G*F*Src (here buf = G*momD1*G*F*Src)
+    momD1(buf, fft);
+    prop = prop + q*q*G*buf;
 
-    // full charged scalar propagator
-    fft.FFT_dim(buf, GFSrc, env().getNd()-1, FFT::backward);
-    prop = buf + q*propQ + q*q*propSun + q*q*propTad;
+    // - q^2*G*momD2*G*F*Src (momD2 = F*D2*Finv)
+    buf = GFSrc;
+    momD2(buf, fft);
+    prop = prop - q*q*G*buf;
+
+    // final FT
+    fft.FFT_all_dim(prop, prop, FFT::backward);
     
     // OUTPUT IF NECESSARY
     if (!par().output.empty())
     {
-        Result result;
-        TComplex            site;
-        std::vector<int>    siteCoor;
+        std::string           filename = par().output + "." +
+                                         std::to_string(vm().getTrajectory());
         
-        LOG(Message) << "Saving momentum-projected propagator to '"
-                     << RESULT_FILE_NAME(par().output) << "'..."
-                     << std::endl;
-        result.projection.resize(par().outputMom.size());
-        result.lattice_size = env().getGrid()->_fdimensions;
-        result.mass = par().mass;
-        result.charge = q;
-        siteCoor.resize(env().getNd());
-        for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
+        LOG(Message) << "Saving zero-momentum projection to '"
+                     << filename << "'..." << std::endl;
+        
+        ResultWriter          writer(RESULT_FILE_NAME(par().output));
+        std::vector<TComplex> vecBuf;
+        std::vector<Complex>  result;
+        
+        sliceSum(prop, vecBuf, Tp);
+        result.resize(vecBuf.size());
+        for (unsigned int t = 0; t < vecBuf.size(); ++t)
         {
-            result.projection[i_p].momentum = strToVec<int>(par().outputMom[i_p]);
-
-            LOG(Message) << "Calculating (" << par().outputMom[i_p]
-                         << ") momentum projection" << std::endl;
-
-            result.projection[i_p].corr_0.resize(env().getGrid()->_fdimensions[env().getNd()-1]);
-            result.projection[i_p].corr.resize(env().getGrid()->_fdimensions[env().getNd()-1]);
-            result.projection[i_p].corr_Q.resize(env().getGrid()->_fdimensions[env().getNd()-1]);
-            result.projection[i_p].corr_Sun.resize(env().getGrid()->_fdimensions[env().getNd()-1]);
-            result.projection[i_p].corr_Tad.resize(env().getGrid()->_fdimensions[env().getNd()-1]);
-
-            for (unsigned int j = 0; j < env().getNd()-1; ++j)
-            {
-                siteCoor[j] = result.projection[i_p].momentum[j];
+            result[t] = TensorRemove(vecBuf[t]);
         }
-
-            for (unsigned int t = 0; t < result.projection[i_p].corr.size(); ++t)
-            {
-                siteCoor[env().getNd()-1] = t;
-                peekSite(site, prop, siteCoor);
-                result.projection[i_p].corr[t]=TensorRemove(site);
-                peekSite(site, buf, siteCoor);
-                result.projection[i_p].corr_0[t]=TensorRemove(site);
-                peekSite(site, propQ, siteCoor);
-                result.projection[i_p].corr_Q[t]=TensorRemove(site);
-                peekSite(site, propSun, siteCoor);
-                result.projection[i_p].corr_Sun[t]=TensorRemove(site);
-                peekSite(site, propTad, siteCoor);
-                result.projection[i_p].corr_Tad[t]=TensorRemove(site);
+        write(writer, "charge", q);
+        write(writer, "prop", result);
     }
-        }
-        saveResult(par().output, "prop", result);
-    }
-
-    std::vector<int> mask(env().getNd(),1);
-    mask[env().getNd()-1] = 0;
-    fft.FFT_dim_mask(prop, prop, mask, FFT::backward);
-    fft.FFT_dim_mask(propQ, propQ, mask, FFT::backward);
-    fft.FFT_dim_mask(propSun, propSun, mask, FFT::backward);
-    fft.FFT_dim_mask(propTad, propTad, mask, FFT::backward);
 }
 
 void TChargedProp::makeCaches(void)
 {
     auto &freeMomProp = envGet(ScalarField, freeMomPropName_);
     auto &GFSrc       = envGet(ScalarField, GFSrcName_);
-	auto &prop0		  = envGet(ScalarField, prop0Name_);
     auto &fft         = envGet(FFT, fftName_);
 
     if (!freeMomPropDone_)
     {
-        LOG(Message) << "Caching momentum-space free scalar propagator"
+        LOG(Message) << "Caching momentum space free scalar propagator"
                      << " (mass= " << par().mass << ")..." << std::endl;
         SIMPL::MomentumSpacePropagator(freeMomProp, par().mass);
     }
     if (!GFSrcDone_)
     {   
+        FFT  fft(env().getGrid());
         auto &source = envGet(ScalarField, par().source);
 
         LOG(Message) << "Caching G*F*src..." << std::endl;
         fft.FFT_all_dim(GFSrc, source, FFT::forward);
         GFSrc = freeMomProp*GFSrc;
     }
-	if (!prop0Done_)
-	{
-		LOG(Message) << "Caching position-space free scalar propagator..."
-                     << std::endl;
-		fft.FFT_all_dim(prop0, GFSrc, FFT::backward);
-	}
     if (!phasesDone_)
     {
         std::vector<int> &l = env().getGrid()->_fdimensions;
@@ -240,14 +185,6 @@ void TChargedProp::makeCaches(void)
             phase_.push_back(&phmu);
         }
     }
-    else
-    {
-        phase_.clear();
-        for (unsigned int mu = 0; mu < env().getNd(); ++mu)
-        {
-            phase_.push_back(env().getObject<ScalarField>(phaseName_[mu]));
-        }
-    }
 }
 
 void TChargedProp::momD1(ScalarField &s, FFT &fft)

extras/Hadrons/Modules/MScalar/ChargedProp.hpp

@@ -7,7 +7,6 @@ Source file: extras/Hadrons/Modules/MScalar/ChargedProp.hpp
 Copyright (C) 2015-2018
 
 Author: Antonin Portelli <antonin.portelli@me.com>
-Author: James Harrison <j.harrison@soton.ac.uk>
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
@@ -48,8 +47,7 @@ public:
                                     std::string, source,
                                     double,      mass,
                                     double,      charge,
-                                    std::string, output,
-                                    std::vector<std::string>, outputMom);
+                                    std::string, output);
 };
 
 class TChargedProp: public Module<ChargedPropPar>
@@ -58,31 +56,11 @@ public:
     SCALAR_TYPE_ALIASES(SIMPL,);
     typedef PhotonR::GaugeField     EmField;
     typedef PhotonR::GaugeLinkField EmComp;
-    class Result: Serializable
-    {
-    public:
-        class Projection: Serializable
-        {
-        public:
-            GRID_SERIALIZABLE_CLASS_MEMBERS(Projection,
-                                            std::vector<int>,     momentum,
-                                            std::vector<Complex>, corr,
-                                            std::vector<Complex>, corr_0,
-                                            std::vector<Complex>, corr_Q,
-                                            std::vector<Complex>, corr_Sun,
-                                            std::vector<Complex>, corr_Tad);
-        };
-        GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
-                                        std::vector<int>,        lattice_size,
-                                        double,                  mass,
-                                        double,                  charge,
-                                        std::vector<Projection>, projection);
-    };
 public:
     // constructor
     TChargedProp(const std::string name);
     // destructor
-    virtual ~TChargedProp(void) {};
+    virtual ~TChargedProp(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -96,15 +74,13 @@ private:
     void momD1(ScalarField &s, FFT &fft);
     void momD2(ScalarField &s, FFT &fft);
 private:
-    bool                       freeMomPropDone_, GFSrcDone_, prop0Done_,
-                               phasesDone_;
-    std::string                freeMomPropName_, GFSrcName_, prop0Name_,
-                               propQName_, propSunName_, propTadName_, fftName_;
+    bool                       freeMomPropDone_, GFSrcDone_, phasesDone_;
+    std::string                freeMomPropName_, GFSrcName_, fftName_;
     std::vector<std::string>   phaseName_;
     std::vector<ScalarField *> phase_;
 };
 
-MODULE_REGISTER(ChargedProp, TChargedProp, MScalar);
+MODULE_REGISTER_NS(ChargedProp, TChargedProp, MScalar);
 
 END_MODULE_NAMESPACE
 

extras/Hadrons/Modules/MScalar/FreeProp.cc

@@ -83,6 +83,8 @@ void TFreeProp::execute(void)
     
     if (!par().output.empty())
     {
+        TextWriter            writer(par().output + "." +
+                                     std::to_string(vm().getTrajectory()));
         std::vector<TComplex> buf;
         std::vector<Complex>  result;
         
@@ -92,6 +94,6 @@ void TFreeProp::execute(void)
         {
             result[t] = TensorRemove(buf[t]);
         }
-        saveResult(par().output, "freeprop", result);
+        write(writer, "prop", result);
     }
 }

extras/Hadrons/Modules/MScalar/FreeProp.hpp

@@ -56,7 +56,7 @@ public:
     // constructor
     TFreeProp(const std::string name);
     // destructor
-    virtual ~TFreeProp(void) {};
+    virtual ~TFreeProp(void) = default;
     // dependency relation
     virtual std::vector<std::string> getInput(void);
     virtual std::vector<std::string> getOutput(void);
@@ -70,7 +70,7 @@ private:
     bool        freePropDone_;
 };
 
-MODULE_REGISTER(FreeProp, TFreeProp, MScalar);
+MODULE_REGISTER_NS(FreeProp, TFreeProp, MScalar);
 
 END_MODULE_NAMESPACE