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Author SHA1 Message Date
a5645a7efe for dwf_precondition 2018-05-30 09:48:52 +01:00
8b3e738269 for dwf_precondition 2018-05-30 09:47:38 +01:00
660 changed files with 11590 additions and 44780 deletions

27
.gitignore vendored
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@ -83,7 +83,6 @@ ltmain.sh
.Trashes
ehthumbs.db
Thumbs.db
.dirstamp
# build directory #
###################
@ -98,8 +97,11 @@ build.sh
# Eigen source #
################
Grid/Eigen
Eigen/*
lib/Eigen/*
# FFTW source #
################
lib/fftw/*
# libtool macros #
##################
@ -110,8 +112,21 @@ m4/libtool.m4
################
gh-pages/
# Buck files #
##############
.buck*
buck-out
BUCK
make-bin-BUCK.sh
# generated sources #
#####################
Grid/qcd/spin/gamma-gen/*.h
Grid/qcd/spin/gamma-gen/*.cc
Grid/util/Version.h
lib/qcd/spin/gamma-gen/*.h
lib/qcd/spin/gamma-gen/*.cc
lib/version.h
# vs code editor files #
########################
.vscode/
.vscode/settings.json
settings.json

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@ -9,11 +9,6 @@ matrix:
- os: osx
osx_image: xcode8.3
compiler: clang
env: PREC=single
- os: osx
osx_image: xcode8.3
compiler: clang
env: PREC=double
before_install:
- export GRIDDIR=`pwd`
@ -21,7 +16,7 @@ before_install:
- if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export PATH="${GRIDDIR}/clang/bin:${PATH}"; fi
- if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export LD_LIBRARY_PATH="${GRIDDIR}/clang/lib:${LD_LIBRARY_PATH}"; fi
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew update; fi
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc openssl; fi
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc; fi
install:
- export CWD=`pwd`
@ -38,7 +33,6 @@ install:
- which $CXX
- $CXX --version
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export LDFLAGS='-L/usr/local/lib'; fi
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export EXTRACONF='--with-openssl=/usr/local/opt/openssl'; fi
script:
- ./bootstrap.sh
@ -55,7 +49,12 @@ script:
- make -j4
- make install
- cd $CWD/build
- ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF}
- ../configure --enable-precision=single --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install
- make -j4
- ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
- echo make clean
- ../configure --enable-precision=double --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install
- make -j4
- ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
- make check

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@ -1,5 +0,0 @@
Version : 0.8.0
- Clang 3.5 and above, ICPC v16 and above, GCC 6.3 and above recommended
- MPI and MPI3 comms optimisations for KNL and OPA finished
- Half precision comms

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@ -1,244 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/CommunicationAvoidingGeneralisedMinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H
#define GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H
namespace Grid {
template<class Field>
class CommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> {
public:
bool ErrorOnNoConverge; // Throw an assert when CAGMRES fails to converge,
// defaults to true
RealD Tolerance;
Integer MaxIterations;
Integer RestartLength;
Integer MaxNumberOfRestarts;
Integer IterationCount; // Number of iterations the CAGMRES took to finish,
// filled in upon completion
GridStopWatch MatrixTimer;
GridStopWatch LinalgTimer;
GridStopWatch QrTimer;
GridStopWatch CompSolutionTimer;
Eigen::MatrixXcd H;
std::vector<std::complex<double>> y;
std::vector<std::complex<double>> gamma;
std::vector<std::complex<double>> c;
std::vector<std::complex<double>> s;
CommunicationAvoidingGeneralisedMinimalResidual(RealD tol,
Integer maxit,
Integer restart_length,
bool err_on_no_conv = true)
: Tolerance(tol)
, MaxIterations(maxit)
, RestartLength(restart_length)
, MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1))
, ErrorOnNoConverge(err_on_no_conv)
, H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base
, y(RestartLength + 1, 0.)
, gamma(RestartLength + 1, 0.)
, c(RestartLength + 1, 0.)
, s(RestartLength + 1, 0.) {};
void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) {
std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular GMRES" << std::endl;
psi.checkerboard = src.checkerboard;
conformable(psi, src);
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD cp;
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
Field r(src._grid);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl;
std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: src " << ssq << std::endl;
MatrixTimer.Reset();
LinalgTimer.Reset();
QrTimer.Reset();
CompSolutionTimer.Reset();
GridStopWatch SolverTimer;
SolverTimer.Start();
IterationCount = 0;
for (int k=0; k<MaxNumberOfRestarts; k++) {
cp = outerLoopBody(LinOp, src, psi, rsq);
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
LinOp.Op(psi,r);
axpy(r,-1.0,src,r);
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "CommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "CAGMRES Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "CAGMRES Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "CAGMRES Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "CAGMRES Time elapsed: QR " << QrTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "CAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl;
return;
}
}
std::cout << GridLogMessage << "CommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl;
if (ErrorOnNoConverge)
assert(0);
}
RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) {
RealD cp = 0;
Field w(src._grid);
Field r(src._grid);
// this should probably be made a class member so that it is only allocated once, not in every restart
std::vector<Field> v(RestartLength + 1, src._grid); for (auto &elem : v) elem = zero;
MatrixTimer.Start();
LinOp.Op(psi, w);
MatrixTimer.Stop();
LinalgTimer.Start();
r = src - w;
gamma[0] = sqrt(norm2(r));
v[0] = (1. / gamma[0]) * r;
LinalgTimer.Stop();
for (int i=0; i<RestartLength; i++) {
IterationCount++;
arnoldiStep(LinOp, v, w, i);
qrUpdate(i);
cp = std::norm(gamma[i+1]);
std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount
<< " residual " << cp << " target " << rsq << std::endl;
if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) {
computeSolution(v, psi, i);
return cp;
}
}
assert(0); // Never reached
return cp;
}
void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) {
MatrixTimer.Start();
LinOp.Op(v[iter], w);
MatrixTimer.Stop();
LinalgTimer.Start();
for (int i = 0; i <= iter; ++i) {
H(iter, i) = innerProduct(v[i], w);
w = w - H(iter, i) * v[i];
}
H(iter, iter + 1) = sqrt(norm2(w));
v[iter + 1] = (1. / H(iter, iter + 1)) * w;
LinalgTimer.Stop();
}
void qrUpdate(int iter) {
QrTimer.Start();
for (int i = 0; i < iter ; ++i) {
auto tmp = -s[i] * H(iter, i) + c[i] * H(iter, i + 1);
H(iter, i) = std::conj(c[i]) * H(iter, i) + std::conj(s[i]) * H(iter, i + 1);
H(iter, i + 1) = tmp;
}
// Compute new Givens Rotation
ComplexD nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1)));
c[iter] = H(iter, iter) / nu;
s[iter] = H(iter, iter + 1) / nu;
// Apply new Givens rotation
H(iter, iter) = nu;
H(iter, iter + 1) = 0.;
gamma[iter + 1] = -s[iter] * gamma[iter];
gamma[iter] = std::conj(c[iter]) * gamma[iter];
QrTimer.Stop();
}
void computeSolution(std::vector<Field> const &v, Field &psi, int iter) {
CompSolutionTimer.Start();
for (int i = iter; i >= 0; i--) {
y[i] = gamma[i];
for (int k = i + 1; k <= iter; k++)
y[i] = y[i] - H(k, i) * y[k];
y[i] = y[i] / H(i, i);
}
for (int i = 0; i <= iter; i++)
psi = psi + v[i] * y[i];
CompSolutionTimer.Stop();
}
};
}
#endif

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@ -1,256 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/FlexibleCommunicationAvoidingGeneralisedMinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H
#define GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H
namespace Grid {
template<class Field>
class FlexibleCommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> {
public:
bool ErrorOnNoConverge; // Throw an assert when FCAGMRES fails to converge,
// defaults to true
RealD Tolerance;
Integer MaxIterations;
Integer RestartLength;
Integer MaxNumberOfRestarts;
Integer IterationCount; // Number of iterations the FCAGMRES took to finish,
// filled in upon completion
GridStopWatch MatrixTimer;
GridStopWatch PrecTimer;
GridStopWatch LinalgTimer;
GridStopWatch QrTimer;
GridStopWatch CompSolutionTimer;
Eigen::MatrixXcd H;
std::vector<std::complex<double>> y;
std::vector<std::complex<double>> gamma;
std::vector<std::complex<double>> c;
std::vector<std::complex<double>> s;
LinearFunction<Field> &Preconditioner;
FlexibleCommunicationAvoidingGeneralisedMinimalResidual(RealD tol,
Integer maxit,
LinearFunction<Field> &Prec,
Integer restart_length,
bool err_on_no_conv = true)
: Tolerance(tol)
, MaxIterations(maxit)
, RestartLength(restart_length)
, MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1))
, ErrorOnNoConverge(err_on_no_conv)
, H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base
, y(RestartLength + 1, 0.)
, gamma(RestartLength + 1, 0.)
, c(RestartLength + 1, 0.)
, s(RestartLength + 1, 0.)
, Preconditioner(Prec) {};
void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) {
std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular FGMRES" << std::endl;
psi.checkerboard = src.checkerboard;
conformable(psi, src);
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD cp;
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
Field r(src._grid);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl;
std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: src " << ssq << std::endl;
PrecTimer.Reset();
MatrixTimer.Reset();
LinalgTimer.Reset();
QrTimer.Reset();
CompSolutionTimer.Reset();
GridStopWatch SolverTimer;
SolverTimer.Start();
IterationCount = 0;
for (int k=0; k<MaxNumberOfRestarts; k++) {
cp = outerLoopBody(LinOp, src, psi, rsq);
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
LinOp.Op(psi,r);
axpy(r,-1.0,src,r);
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: Precon " << PrecTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: QR " << QrTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FCAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl;
return;
}
}
std::cout << GridLogMessage << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl;
if (ErrorOnNoConverge)
assert(0);
}
RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) {
RealD cp = 0;
Field w(src._grid);
Field r(src._grid);
// these should probably be made class members so that they are only allocated once, not in every restart
std::vector<Field> v(RestartLength + 1, src._grid); for (auto &elem : v) elem = zero;
std::vector<Field> z(RestartLength + 1, src._grid); for (auto &elem : z) elem = zero;
MatrixTimer.Start();
LinOp.Op(psi, w);
MatrixTimer.Stop();
LinalgTimer.Start();
r = src - w;
gamma[0] = sqrt(norm2(r));
v[0] = (1. / gamma[0]) * r;
LinalgTimer.Stop();
for (int i=0; i<RestartLength; i++) {
IterationCount++;
arnoldiStep(LinOp, v, z, w, i);
qrUpdate(i);
cp = std::norm(gamma[i+1]);
std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount
<< " residual " << cp << " target " << rsq << std::endl;
if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) {
computeSolution(z, psi, i);
return cp;
}
}
assert(0); // Never reached
return cp;
}
void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) {
PrecTimer.Start();
Preconditioner(v[iter], z[iter]);
PrecTimer.Stop();
MatrixTimer.Start();
LinOp.Op(z[iter], w);
MatrixTimer.Stop();
LinalgTimer.Start();
for (int i = 0; i <= iter; ++i) {
H(iter, i) = innerProduct(v[i], w);
w = w - H(iter, i) * v[i];
}
H(iter, iter + 1) = sqrt(norm2(w));
v[iter + 1] = (1. / H(iter, iter + 1)) * w;
LinalgTimer.Stop();
}
void qrUpdate(int iter) {
QrTimer.Start();
for (int i = 0; i < iter ; ++i) {
auto tmp = -s[i] * H(iter, i) + c[i] * H(iter, i + 1);
H(iter, i) = std::conj(c[i]) * H(iter, i) + std::conj(s[i]) * H(iter, i + 1);
H(iter, i + 1) = tmp;
}
// Compute new Givens Rotation
ComplexD nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1)));
c[iter] = H(iter, iter) / nu;
s[iter] = H(iter, iter + 1) / nu;
// Apply new Givens rotation
H(iter, iter) = nu;
H(iter, iter + 1) = 0.;
gamma[iter + 1] = -s[iter] * gamma[iter];
gamma[iter] = std::conj(c[iter]) * gamma[iter];
QrTimer.Stop();
}
void computeSolution(std::vector<Field> const &z, Field &psi, int iter) {
CompSolutionTimer.Start();
for (int i = iter; i >= 0; i--) {
y[i] = gamma[i];
for (int k = i + 1; k <= iter; k++)
y[i] = y[i] - H(k, i) * y[k];
y[i] = y[i] / H(i, i);
}
for (int i = 0; i <= iter; i++)
psi = psi + z[i] * y[i];
CompSolutionTimer.Stop();
}
};
}
#endif

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@ -1,254 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H
#define GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H
namespace Grid {
template<class Field>
class FlexibleGeneralisedMinimalResidual : public OperatorFunction<Field> {
public:
bool ErrorOnNoConverge; // Throw an assert when FGMRES fails to converge,
// defaults to true
RealD Tolerance;
Integer MaxIterations;
Integer RestartLength;
Integer MaxNumberOfRestarts;
Integer IterationCount; // Number of iterations the FGMRES took to finish,
// filled in upon completion
GridStopWatch MatrixTimer;
GridStopWatch PrecTimer;
GridStopWatch LinalgTimer;
GridStopWatch QrTimer;
GridStopWatch CompSolutionTimer;
Eigen::MatrixXcd H;
std::vector<std::complex<double>> y;
std::vector<std::complex<double>> gamma;
std::vector<std::complex<double>> c;
std::vector<std::complex<double>> s;
LinearFunction<Field> &Preconditioner;
FlexibleGeneralisedMinimalResidual(RealD tol,
Integer maxit,
LinearFunction<Field> &Prec,
Integer restart_length,
bool err_on_no_conv = true)
: Tolerance(tol)
, MaxIterations(maxit)
, RestartLength(restart_length)
, MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1))
, ErrorOnNoConverge(err_on_no_conv)
, H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base
, y(RestartLength + 1, 0.)
, gamma(RestartLength + 1, 0.)
, c(RestartLength + 1, 0.)
, s(RestartLength + 1, 0.)
, Preconditioner(Prec) {};
void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) {
psi.checkerboard = src.checkerboard;
conformable(psi, src);
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD cp;
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
Field r(src._grid);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: guess " << guess << std::endl;
std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: src " << ssq << std::endl;
PrecTimer.Reset();
MatrixTimer.Reset();
LinalgTimer.Reset();
QrTimer.Reset();
CompSolutionTimer.Reset();
GridStopWatch SolverTimer;
SolverTimer.Start();
IterationCount = 0;
for (int k=0; k<MaxNumberOfRestarts; k++) {
cp = outerLoopBody(LinOp, src, psi, rsq);
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
LinOp.Op(psi,r);
axpy(r,-1.0,src,r);
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "FlexibleGeneralisedMinimalResidual: Converged on iteration " << IterationCount
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: Precon " << PrecTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: QR " << QrTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "FGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl;
return;
}
}
std::cout << GridLogMessage << "FlexibleGeneralisedMinimalResidual did NOT converge" << std::endl;
if (ErrorOnNoConverge)
assert(0);
}
RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) {
RealD cp = 0;
Field w(src._grid);
Field r(src._grid);
// these should probably be made class members so that they are only allocated once, not in every restart
std::vector<Field> v(RestartLength + 1, src._grid); for (auto &elem : v) elem = zero;
std::vector<Field> z(RestartLength + 1, src._grid); for (auto &elem : z) elem = zero;
MatrixTimer.Start();
LinOp.Op(psi, w);
MatrixTimer.Stop();
LinalgTimer.Start();
r = src - w;
gamma[0] = sqrt(norm2(r));
v[0] = (1. / gamma[0]) * r;
LinalgTimer.Stop();
for (int i=0; i<RestartLength; i++) {
IterationCount++;
arnoldiStep(LinOp, v, z, w, i);
qrUpdate(i);
cp = std::norm(gamma[i+1]);
std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: Iteration " << IterationCount
<< " residual " << cp << " target " << rsq << std::endl;
if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) {
computeSolution(z, psi, i);
return cp;
}
}
assert(0); // Never reached
return cp;
}
void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) {
PrecTimer.Start();
Preconditioner(v[iter], z[iter]);
PrecTimer.Stop();
MatrixTimer.Start();
LinOp.Op(z[iter], w);
MatrixTimer.Stop();
LinalgTimer.Start();
for (int i = 0; i <= iter; ++i) {
H(iter, i) = innerProduct(v[i], w);
w = w - H(iter, i) * v[i];
}
H(iter, iter + 1) = sqrt(norm2(w));
v[iter + 1] = (1. / H(iter, iter + 1)) * w;
LinalgTimer.Stop();
}
void qrUpdate(int iter) {
QrTimer.Start();
for (int i = 0; i < iter ; ++i) {
auto tmp = -s[i] * H(iter, i) + c[i] * H(iter, i + 1);
H(iter, i) = std::conj(c[i]) * H(iter, i) + std::conj(s[i]) * H(iter, i + 1);
H(iter, i + 1) = tmp;
}
// Compute new Givens Rotation
ComplexD nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1)));
c[iter] = H(iter, iter) / nu;
s[iter] = H(iter, iter + 1) / nu;
// Apply new Givens rotation
H(iter, iter) = nu;
H(iter, iter + 1) = 0.;
gamma[iter + 1] = -s[iter] * gamma[iter];
gamma[iter] = std::conj(c[iter]) * gamma[iter];
QrTimer.Stop();
}
void computeSolution(std::vector<Field> const &z, Field &psi, int iter) {
CompSolutionTimer.Start();
for (int i = iter; i >= 0; i--) {
y[i] = gamma[i];
for (int k = i + 1; k <= iter; k++)
y[i] = y[i] - H(k, i) * y[k];
y[i] = y[i] / H(i, i);
}
for (int i = 0; i <= iter; i++)
psi = psi + z[i] * y[i];
CompSolutionTimer.Stop();
}
};
}
#endif

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@ -1,242 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/GeneralisedMinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_GENERALISED_MINIMAL_RESIDUAL_H
#define GRID_GENERALISED_MINIMAL_RESIDUAL_H
namespace Grid {
template<class Field>
class GeneralisedMinimalResidual : public OperatorFunction<Field> {
public:
bool ErrorOnNoConverge; // Throw an assert when GMRES fails to converge,
// defaults to true
RealD Tolerance;
Integer MaxIterations;
Integer RestartLength;
Integer MaxNumberOfRestarts;
Integer IterationCount; // Number of iterations the GMRES took to finish,
// filled in upon completion
GridStopWatch MatrixTimer;
GridStopWatch LinalgTimer;
GridStopWatch QrTimer;
GridStopWatch CompSolutionTimer;
Eigen::MatrixXcd H;
std::vector<std::complex<double>> y;
std::vector<std::complex<double>> gamma;
std::vector<std::complex<double>> c;
std::vector<std::complex<double>> s;
GeneralisedMinimalResidual(RealD tol,
Integer maxit,
Integer restart_length,
bool err_on_no_conv = true)
: Tolerance(tol)
, MaxIterations(maxit)
, RestartLength(restart_length)
, MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1))
, ErrorOnNoConverge(err_on_no_conv)
, H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base
, y(RestartLength + 1, 0.)
, gamma(RestartLength + 1, 0.)
, c(RestartLength + 1, 0.)
, s(RestartLength + 1, 0.) {};
void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) {
psi.checkerboard = src.checkerboard;
conformable(psi, src);
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD cp;
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
Field r(src._grid);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "GeneralisedMinimalResidual: guess " << guess << std::endl;
std::cout << GridLogIterative << "GeneralisedMinimalResidual: src " << ssq << std::endl;
MatrixTimer.Reset();
LinalgTimer.Reset();
QrTimer.Reset();
CompSolutionTimer.Reset();
GridStopWatch SolverTimer;
SolverTimer.Start();
IterationCount = 0;
for (int k=0; k<MaxNumberOfRestarts; k++) {
cp = outerLoopBody(LinOp, src, psi, rsq);
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
LinOp.Op(psi,r);
axpy(r,-1.0,src,r);
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "GeneralisedMinimalResidual: Converged on iteration " << IterationCount
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "GMRES Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "GMRES Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "GMRES Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "GMRES Time elapsed: QR " << QrTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "GMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl;
return;
}
}
std::cout << GridLogMessage << "GeneralisedMinimalResidual did NOT converge" << std::endl;
if (ErrorOnNoConverge)
assert(0);
}
RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) {
RealD cp = 0;
Field w(src._grid);
Field r(src._grid);
// this should probably be made a class member so that it is only allocated once, not in every restart
std::vector<Field> v(RestartLength + 1, src._grid); for (auto &elem : v) elem = zero;
MatrixTimer.Start();
LinOp.Op(psi, w);
MatrixTimer.Stop();
LinalgTimer.Start();
r = src - w;
gamma[0] = sqrt(norm2(r));
v[0] = (1. / gamma[0]) * r;
LinalgTimer.Stop();
for (int i=0; i<RestartLength; i++) {
IterationCount++;
arnoldiStep(LinOp, v, w, i);
qrUpdate(i);
cp = std::norm(gamma[i+1]);
std::cout << GridLogIterative << "GeneralisedMinimalResidual: Iteration " << IterationCount
<< " residual " << cp << " target " << rsq << std::endl;
if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) {
computeSolution(v, psi, i);
return cp;
}
}
assert(0); // Never reached
return cp;
}
void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) {
MatrixTimer.Start();
LinOp.Op(v[iter], w);
MatrixTimer.Stop();
LinalgTimer.Start();
for (int i = 0; i <= iter; ++i) {
H(iter, i) = innerProduct(v[i], w);
w = w - H(iter, i) * v[i];
}
H(iter, iter + 1) = sqrt(norm2(w));
v[iter + 1] = (1. / H(iter, iter + 1)) * w;
LinalgTimer.Stop();
}
void qrUpdate(int iter) {
QrTimer.Start();
for (int i = 0; i < iter ; ++i) {
auto tmp = -s[i] * H(iter, i) + c[i] * H(iter, i + 1);
H(iter, i) = std::conj(c[i]) * H(iter, i) + std::conj(s[i]) * H(iter, i + 1);
H(iter, i + 1) = tmp;
}
// Compute new Givens Rotation
ComplexD nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1)));
c[iter] = H(iter, iter) / nu;
s[iter] = H(iter, iter + 1) / nu;
// Apply new Givens rotation
H(iter, iter) = nu;
H(iter, iter + 1) = 0.;
gamma[iter + 1] = -s[iter] * gamma[iter];
gamma[iter] = std::conj(c[iter]) * gamma[iter];
QrTimer.Stop();
}
void computeSolution(std::vector<Field> const &v, Field &psi, int iter) {
CompSolutionTimer.Start();
for (int i = iter; i >= 0; i--) {
y[i] = gamma[i];
for (int k = i + 1; k <= iter; k++)
y[i] = y[i] - H(k, i) * y[k];
y[i] = y[i] / H(i, i);
}
for (int i = 0; i <= iter; i++)
psi = psi + v[i] * y[i];
CompSolutionTimer.Stop();
}
};
}
#endif

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@ -1,156 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/MinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_MINIMAL_RESIDUAL_H
#define GRID_MINIMAL_RESIDUAL_H
namespace Grid {
template<class Field> class MinimalResidual : public OperatorFunction<Field> {
public:
bool ErrorOnNoConverge; // throw an assert when the MR fails to converge.
// Defaults true.
RealD Tolerance;
Integer MaxIterations;
RealD overRelaxParam;
Integer IterationsToComplete; // Number of iterations the MR took to finish.
// Filled in upon completion
MinimalResidual(RealD tol, Integer maxit, Real ovrelparam = 1.0, bool err_on_no_conv = true)
: Tolerance(tol), MaxIterations(maxit), overRelaxParam(ovrelparam), ErrorOnNoConverge(err_on_no_conv){};
void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) {
psi.checkerboard = src.checkerboard;
conformable(psi, src);
Complex a, c;
Real d;
Field Mr(src);
Field r(src);
// Initial residual computation & set up
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
Linop.Op(psi, Mr);
r = src - Mr;
RealD cp = norm2(r);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "MinimalResidual: guess " << guess << std::endl;
std::cout << GridLogIterative << "MinimalResidual: src " << ssq << std::endl;
std::cout << GridLogIterative << "MinimalResidual: mp " << d << std::endl;
std::cout << GridLogIterative << "MinimalResidual: cp,r " << cp << std::endl;
if (cp <= rsq) {
return;
}
std::cout << GridLogIterative << "MinimalResidual: k=0 residual " << cp << " target " << rsq << std::endl;
GridStopWatch LinalgTimer;
GridStopWatch MatrixTimer;
GridStopWatch SolverTimer;
SolverTimer.Start();
int k;
for (k = 1; k <= MaxIterations; k++) {
MatrixTimer.Start();
Linop.Op(r, Mr);
MatrixTimer.Stop();
LinalgTimer.Start();
c = innerProduct(Mr, r);
d = norm2(Mr);
a = c / d;
a = a * overRelaxParam;
psi = psi + r * a;
r = r - Mr * a;
cp = norm2(r);
LinalgTimer.Stop();
std::cout << GridLogIterative << "MinimalResidual: Iteration " << k
<< " residual " << cp << " target " << rsq << std::endl;
std::cout << GridLogDebug << "a = " << a << " c = " << c << " d = " << d << std::endl;
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
Linop.Op(psi, Mr);
r = src - Mr;
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "MinimalResidual Converged on iteration " << k
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "MR Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MR Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MR Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
if (ErrorOnNoConverge)
assert(true_residual / Tolerance < 10000.0);
IterationsToComplete = k;
return;
}
}
std::cout << GridLogMessage << "MinimalResidual did NOT converge"
<< std::endl;
if (ErrorOnNoConverge)
assert(0);
IterationsToComplete = k;
}
};
} // namespace Grid
#endif

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@ -1,273 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/MixedPrecisionFlexibleGeneralisedMinimalResidual.h
Copyright (C) 2015
Author: Daniel Richtmann <daniel.richtmann@ur.de>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H
#define GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H
namespace Grid {
template<class FieldD, class FieldF, typename std::enable_if<getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>
class MixedPrecisionFlexibleGeneralisedMinimalResidual : public OperatorFunction<FieldD> {
public:
bool ErrorOnNoConverge; // Throw an assert when MPFGMRES fails to converge,
// defaults to true
RealD Tolerance;
Integer MaxIterations;
Integer RestartLength;
Integer MaxNumberOfRestarts;
Integer IterationCount; // Number of iterations the MPFGMRES took to finish,
// filled in upon completion
GridStopWatch MatrixTimer;
GridStopWatch PrecTimer;
GridStopWatch LinalgTimer;
GridStopWatch QrTimer;
GridStopWatch CompSolutionTimer;
GridStopWatch ChangePrecTimer;
Eigen::MatrixXcd H;
std::vector<std::complex<double>> y;
std::vector<std::complex<double>> gamma;
std::vector<std::complex<double>> c;
std::vector<std::complex<double>> s;
GridBase* SinglePrecGrid;
LinearFunction<FieldF> &Preconditioner;
MixedPrecisionFlexibleGeneralisedMinimalResidual(RealD tol,
Integer maxit,
GridBase * sp_grid,
LinearFunction<FieldF> &Prec,
Integer restart_length,
bool err_on_no_conv = true)
: Tolerance(tol)
, MaxIterations(maxit)
, RestartLength(restart_length)
, MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1))
, ErrorOnNoConverge(err_on_no_conv)
, H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base
, y(RestartLength + 1, 0.)
, gamma(RestartLength + 1, 0.)
, c(RestartLength + 1, 0.)
, s(RestartLength + 1, 0.)
, SinglePrecGrid(sp_grid)
, Preconditioner(Prec) {};
void operator()(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi) {
psi.checkerboard = src.checkerboard;
conformable(psi, src);
RealD guess = norm2(psi);
assert(std::isnan(guess) == 0);
RealD cp;
RealD ssq = norm2(src);
RealD rsq = Tolerance * Tolerance * ssq;
FieldD r(src._grid);
std::cout << std::setprecision(4) << std::scientific;
std::cout << GridLogIterative << "MPFGMRES: guess " << guess << std::endl;
std::cout << GridLogIterative << "MPFGMRES: src " << ssq << std::endl;
PrecTimer.Reset();
MatrixTimer.Reset();
LinalgTimer.Reset();
QrTimer.Reset();
CompSolutionTimer.Reset();
ChangePrecTimer.Reset();
GridStopWatch SolverTimer;
SolverTimer.Start();
IterationCount = 0;
for (int k=0; k<MaxNumberOfRestarts; k++) {
cp = outerLoopBody(LinOp, src, psi, rsq);
// Stopping condition
if (cp <= rsq) {
SolverTimer.Stop();
LinOp.Op(psi,r);
axpy(r,-1.0,src,r);
RealD srcnorm = sqrt(ssq);
RealD resnorm = sqrt(norm2(r));
RealD true_residual = resnorm / srcnorm;
std::cout << GridLogMessage << "MPFGMRES: Converged on iteration " << IterationCount
<< " computed residual " << sqrt(cp / ssq)
<< " true residual " << true_residual
<< " target " << Tolerance << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: Total " << SolverTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: Precon " << PrecTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: Matrix " << MatrixTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: Linalg " << LinalgTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: QR " << QrTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl;
std::cout << GridLogMessage << "MPFGMRES Time elapsed: PrecChange " << ChangePrecTimer.Elapsed() << std::endl;
return;
}
}
std::cout << GridLogMessage << "MPFGMRES did NOT converge" << std::endl;
if (ErrorOnNoConverge)
assert(0);
}
RealD outerLoopBody(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi, RealD rsq) {
RealD cp = 0;
FieldD w(src._grid);
FieldD r(src._grid);
// these should probably be made class members so that they are only allocated once, not in every restart
std::vector<FieldD> v(RestartLength + 1, src._grid); for (auto &elem : v) elem = zero;
std::vector<FieldD> z(RestartLength + 1, src._grid); for (auto &elem : z) elem = zero;
MatrixTimer.Start();
LinOp.Op(psi, w);
MatrixTimer.Stop();
LinalgTimer.Start();
r = src - w;
gamma[0] = sqrt(norm2(r));
v[0] = (1. / gamma[0]) * r;
LinalgTimer.Stop();
for (int i=0; i<RestartLength; i++) {
IterationCount++;
arnoldiStep(LinOp, v, z, w, i);
qrUpdate(i);
cp = std::norm(gamma[i+1]);
std::cout << GridLogIterative << "MPFGMRES: Iteration " << IterationCount
<< " residual " << cp << " target " << rsq << std::endl;
if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) {
computeSolution(z, psi, i);
return cp;
}
}
assert(0); // Never reached
return cp;
}
void arnoldiStep(LinearOperatorBase<FieldD> &LinOp, std::vector<FieldD> &v, std::vector<FieldD> &z, FieldD &w, int iter) {
FieldF v_f(SinglePrecGrid);
FieldF z_f(SinglePrecGrid);
ChangePrecTimer.Start();
precisionChange(v_f, v[iter]);
precisionChange(z_f, z[iter]);
ChangePrecTimer.Stop();
PrecTimer.Start();
Preconditioner(v_f, z_f);
PrecTimer.Stop();
ChangePrecTimer.Start();
precisionChange(z[iter], z_f);
ChangePrecTimer.Stop();
MatrixTimer.Start();
LinOp.Op(z[iter], w);
MatrixTimer.Stop();
LinalgTimer.Start();
for (int i = 0; i <= iter; ++i) {
H(iter, i) = innerProduct(v[i], w);
w = w - H(iter, i) * v[i];
}
H(iter, iter + 1) = sqrt(norm2(w));
v[iter + 1] = (1. / H(iter, iter + 1)) * w;
LinalgTimer.Stop();
}
void qrUpdate(int iter) {
QrTimer.Start();
for (int i = 0; i < iter ; ++i) {
auto tmp = -s[i] * H(iter, i) + c[i] * H(iter, i + 1);
H(iter, i) = std::conj(c[i]) * H(iter, i) + std::conj(s[i]) * H(iter, i + 1);
H(iter, i + 1) = tmp;
}
// Compute new Givens Rotation
ComplexD nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1)));
c[iter] = H(iter, iter) / nu;
s[iter] = H(iter, iter + 1) / nu;
// Apply new Givens rotation
H(iter, iter) = nu;
H(iter, iter + 1) = 0.;
gamma[iter + 1] = -s[iter] * gamma[iter];
gamma[iter] = std::conj(c[iter]) * gamma[iter];
QrTimer.Stop();
}
void computeSolution(std::vector<FieldD> const &z, FieldD &psi, int iter) {
CompSolutionTimer.Start();
for (int i = iter; i >= 0; i--) {
y[i] = gamma[i];
for (int k = i + 1; k <= iter; k++)
y[i] = y[i] - H(k, i) * y[k];
y[i] = y[i] / H(i, i);
}
for (int i = 0; i <= iter; i++)
psi = psi + z[i] * y[i];
CompSolutionTimer.Stop();
}
};
}
#endif

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@ -1,45 +0,0 @@
#pragma once
namespace Grid {
template<class Field> class PowerMethod
{
public:
template<typename T> static RealD normalise(T& v)
{
RealD nn = norm2(v);
nn = sqrt(nn);
v = v * (1.0/nn);
return nn;
}
RealD operator()(LinearOperatorBase<Field> &HermOp, const Field &src)
{
GridBase *grid = src._grid;
// quickly get an idea of the largest eigenvalue to more properly normalize the residuum
RealD evalMaxApprox = 0.0;
auto src_n = src;
auto tmp = src;
const int _MAX_ITER_EST_ = 50;
for (int i=0;i<_MAX_ITER_EST_;i++) {
normalise(src_n);
HermOp.HermOp(src_n,tmp);
RealD vnum = real(innerProduct(src_n,tmp)); // HermOp.
RealD vden = norm2(src_n);
RealD na = vnum/vden;
if ( (fabs(evalMaxApprox/na - 1.0) < 0.01) || (i==_MAX_ITER_EST_-1) ) {
evalMaxApprox = na;
return evalMaxApprox;
}
evalMaxApprox = na;
std::cout << GridLogMessage << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl;
src_n = tmp;
}
assert(0);
return 0;
}
};
}

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/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/SchurRedBlack.h
Copyright (C) 2015
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_SCHUR_RED_BLACK_H
#define GRID_SCHUR_RED_BLACK_H
/*
* Red black Schur decomposition
*
* M = (Mee Meo) = (1 0 ) (Mee 0 ) (1 Mee^{-1} Meo)
* (Moe Moo) (Moe Mee^-1 1 ) (0 Moo-Moe Mee^-1 Meo) (0 1 )
* = L D U
*
* L^-1 = (1 0 )
* (-MoeMee^{-1} 1 )
* L^{dag} = ( 1 Mee^{-dag} Moe^{dag} )
* ( 0 1 )
* L^{-d} = ( 1 -Mee^{-dag} Moe^{dag} )
* ( 0 1 )
*
* U^-1 = (1 -Mee^{-1} Meo)
* (0 1 )
* U^{dag} = ( 1 0)
* (Meo^dag Mee^{-dag} 1)
* U^{-dag} = ( 1 0)
* (-Meo^dag Mee^{-dag} 1)
***********************
* M psi = eta
***********************
*Odd
* i) D_oo psi_o = L^{-1} eta_o
* eta_o' = (D_oo)^dag (eta_o - Moe Mee^{-1} eta_e)
*
* Wilson:
* (D_oo)^{\dag} D_oo psi_o = (D_oo)^dag L^{-1} eta_o
* Stag:
* D_oo psi_o = L^{-1} eta = (eta_o - Moe Mee^{-1} eta_e)
*
* L^-1 eta_o= (1 0 ) (e
* (-MoeMee^{-1} 1 )
*
*Even
* ii) Mee psi_e + Meo psi_o = src_e
*
* => sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
*
*
* TODO: Other options:
*
* a) change checkerboards for Schur e<->o
*
* Left precon by Moo^-1
* b) Doo^{dag} M_oo^-dag Moo^-1 Doo psi_0 = (D_oo)^dag M_oo^-dag Moo^-1 L^{-1} eta_o
* eta_o' = (D_oo)^dag M_oo^-dag Moo^-1 (eta_o - Moe Mee^{-1} eta_e)
*
* Right precon by Moo^-1
* c) M_oo^-dag Doo^{dag} Doo Moo^-1 phi_0 = M_oo^-dag (D_oo)^dag L^{-1} eta_o
* eta_o' = M_oo^-dag (D_oo)^dag (eta_o - Moe Mee^{-1} eta_e)
* psi_o = M_oo^-1 phi_o
* TODO: Deflation
*/
namespace Grid {
///////////////////////////////////////////////////////////////////////////////////////////////////////
// Use base class to share code
///////////////////////////////////////////////////////////////////////////////////////////////////////
///////////////////////////////////////////////////////////////////////////////////////////////////////
// Take a matrix and form a Red Black solver calling a Herm solver
// Use of RB info prevents making SchurRedBlackSolve conform to standard interface
///////////////////////////////////////////////////////////////////////////////////////////////////////
template<class Field> class SchurRedBlackBase {
protected:
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
OperatorFunction<Field> & _HermitianRBSolver;
int CBfactorise;
bool subGuess;
bool useSolnAsInitGuess; // if true user-supplied solution vector is used as initial guess for solver
public:
SchurRedBlackBase(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false,
const bool _solnAsInitGuess = false) :
_HermitianRBSolver(HermitianRBSolver),
useSolnAsInitGuess(_solnAsInitGuess)
{
CBfactorise = 0;
subtractGuess(initSubGuess);
};
void subtractGuess(const bool initSubGuess)
{
subGuess = initSubGuess;
}
bool isSubtractGuess(void)
{
return subGuess;
}
/////////////////////////////////////////////////////////////
// Shared code
/////////////////////////////////////////////////////////////
void operator() (Matrix & _Matrix,const Field &in, Field &out){
ZeroGuesser<Field> guess;
(*this)(_Matrix,in,out,guess);
}
void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out)
{
ZeroGuesser<Field> guess;
(*this)(_Matrix,in,out,guess);
}
template<class Guesser>
void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out,Guesser &guess)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
int nblock = in.size();
std::vector<Field> src_o(nblock,grid);
std::vector<Field> sol_o(nblock,grid);
std::vector<Field> guess_save;
Field resid(fgrid);
Field tmp(grid);
////////////////////////////////////////////////
// Prepare RedBlack source
////////////////////////////////////////////////
for(int b=0;b<nblock;b++){
RedBlackSource(_Matrix,in[b],tmp,src_o[b]);
}
////////////////////////////////////////////////
// Make the guesses
////////////////////////////////////////////////
if ( subGuess ) guess_save.resize(nblock,grid);
for(int b=0;b<nblock;b++){
if(useSolnAsInitGuess) {
pickCheckerboard(Odd, sol_o[b], out[b]);
} else {
guess(src_o[b],sol_o[b]);
}
if ( subGuess ) {
guess_save[b] = sol_o[b];
}
}
//////////////////////////////////////////////////////////////
// Call the block solver
//////////////////////////////////////////////////////////////
std::cout<<GridLogMessage << "SchurRedBlackBase calling the solver for "<<nblock<<" RHS" <<std::endl;
RedBlackSolve(_Matrix,src_o,sol_o);
////////////////////////////////////////////////
// A2A boolean behavioural control & reconstruct other checkerboard
////////////////////////////////////////////////
for(int b=0;b<nblock;b++) {
if (subGuess) sol_o[b] = sol_o[b] - guess_save[b];
///////// Needs even source //////////////
pickCheckerboard(Even,tmp,in[b]);
RedBlackSolution(_Matrix,sol_o[b],tmp,out[b]);
/////////////////////////////////////////////////
// Check unprec residual if possible
/////////////////////////////////////////////////
if ( ! subGuess ) {
_Matrix.M(out[b],resid);
resid = resid-in[b];
RealD ns = norm2(in[b]);
RealD nr = norm2(resid);
std::cout<<GridLogMessage<< "SchurRedBlackBase solver true unprec resid["<<b<<"] "<<std::sqrt(nr/ns) << std::endl;
} else {
std::cout<<GridLogMessage<< "SchurRedBlackBase Guess subtracted after solve["<<b<<"] " << std::endl;
}
}
}
template<class Guesser>
void operator() (Matrix & _Matrix,const Field &in, Field &out,Guesser &guess){
// FIXME CGdiagonalMee not implemented virtual function
// FIXME use CBfactorise to control schur decomp
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field resid(fgrid);
Field src_o(grid);
Field src_e(grid);
Field sol_o(grid);
////////////////////////////////////////////////
// RedBlack source
////////////////////////////////////////////////
RedBlackSource(_Matrix,in,src_e,src_o);
////////////////////////////////
// Construct the guess
////////////////////////////////
if(useSolnAsInitGuess) {
pickCheckerboard(Odd, sol_o, out);
} else {
guess(src_o,sol_o);
}
Field guess_save(grid);
guess_save = sol_o;
//////////////////////////////////////////////////////////////
// Call the red-black solver
//////////////////////////////////////////////////////////////
RedBlackSolve(_Matrix,src_o,sol_o);
////////////////////////////////////////////////
// Fionn A2A boolean behavioural control
////////////////////////////////////////////////
if (subGuess) sol_o= sol_o-guess_save;
///////////////////////////////////////////////////
// RedBlack solution needs the even source
///////////////////////////////////////////////////
RedBlackSolution(_Matrix,sol_o,src_e,out);
// Verify the unprec residual
if ( ! subGuess ) {
_Matrix.M(out,resid);
resid = resid-in;
RealD ns = norm2(in);
RealD nr = norm2(resid);
std::cout<<GridLogMessage << "SchurRedBlackBase solver true unprec resid "<< std::sqrt(nr/ns) << std::endl;
} else {
std::cout << GridLogMessage << "SchurRedBlackBase Guess subtracted after solve." << std::endl;
}
}
/////////////////////////////////////////////////////////////
// Override in derived.
/////////////////////////////////////////////////////////////
virtual void RedBlackSource (Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) =0;
virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) =0;
virtual void RedBlackSolve (Matrix & _Matrix,const Field &src_o, Field &sol_o) =0;
virtual void RedBlackSolve (Matrix & _Matrix,const std::vector<Field> &src_o, std::vector<Field> &sol_o)=0;
};
template<class Field> class SchurRedBlackStaggeredSolve : public SchurRedBlackBase<Field> {
public:
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
SchurRedBlackStaggeredSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false,
const bool _solnAsInitGuess = false)
: SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess)
{
}
//////////////////////////////////////////////////////
// Override RedBlack specialisation
//////////////////////////////////////////////////////
virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field tmp(grid);
Field Mtmp(grid);
pickCheckerboard(Even,src_e,src);
pickCheckerboard(Odd ,src_o,src);
/////////////////////////////////////////////////////
// src_o = (source_o - Moe MeeInv source_e)
/////////////////////////////////////////////////////
_Matrix.MooeeInv(src_e,tmp); assert( tmp.checkerboard ==Even);
_Matrix.Meooe (tmp,Mtmp); assert( Mtmp.checkerboard ==Odd);
tmp=src_o-Mtmp; assert( tmp.checkerboard ==Odd);
_Matrix.Mooee(tmp,src_o); // Extra factor of "m" in source from dumb choice of matrix norm.
}
virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e_c,Field &sol)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field tmp(grid);
Field sol_e(grid);
Field src_e(grid);
src_e = src_e_c; // Const correctness
///////////////////////////////////////////////////
// sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
///////////////////////////////////////////////////
_Matrix.Meooe(sol_o,tmp); assert( tmp.checkerboard ==Even);
src_e = src_e-tmp; assert( src_e.checkerboard ==Even);
_Matrix.MooeeInv(src_e,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_o); assert( sol_o.checkerboard ==Odd );
}
virtual void RedBlackSolve (Matrix & _Matrix,const Field &src_o, Field &sol_o)
{
SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o); assert(sol_o.checkerboard==Odd);
};
virtual void RedBlackSolve (Matrix & _Matrix,const std::vector<Field> &src_o, std::vector<Field> &sol_o)
{
SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);
}
};
template<class Field> using SchurRedBlackStagSolve = SchurRedBlackStaggeredSolve<Field>;
///////////////////////////////////////////////////////////////////////////////////////////////////////
// Site diagonal has Mooee on it.
///////////////////////////////////////////////////////////////////////////////////////////////////////
template<class Field> class SchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field> {
public:
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
SchurRedBlackDiagMooeeSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false,
const bool _solnAsInitGuess = false)
: SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess) {};
//////////////////////////////////////////////////////
// Override RedBlack specialisation
//////////////////////////////////////////////////////
virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field tmp(grid);
Field Mtmp(grid);
pickCheckerboard(Even,src_e,src);
pickCheckerboard(Odd ,src_o,src);
/////////////////////////////////////////////////////
// src_o = Mdag * (source_o - Moe MeeInv source_e)
/////////////////////////////////////////////////////
_Matrix.MooeeInv(src_e,tmp); assert( tmp.checkerboard ==Even);
_Matrix.Meooe (tmp,Mtmp); assert( Mtmp.checkerboard ==Odd);
tmp=src_o-Mtmp; assert( tmp.checkerboard ==Odd);
// get the right MpcDag
SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix);
_HermOpEO.MpcDag(tmp,src_o); assert(src_o.checkerboard ==Odd);
}
virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field tmp(grid);
Field sol_e(grid);
Field src_e_i(grid);
///////////////////////////////////////////////////
// sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
///////////////////////////////////////////////////
_Matrix.Meooe(sol_o,tmp); assert( tmp.checkerboard ==Even);
src_e_i = src_e-tmp; assert( src_e_i.checkerboard ==Even);
_Matrix.MooeeInv(src_e_i,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_o); assert( sol_o.checkerboard ==Odd );
}
virtual void RedBlackSolve (Matrix & _Matrix,const Field &src_o, Field &sol_o)
{
SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o); assert(sol_o.checkerboard==Odd);
};
virtual void RedBlackSolve (Matrix & _Matrix,const std::vector<Field> &src_o, std::vector<Field> &sol_o)
{
SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);
}
};
///////////////////////////////////////////////////////////////////////////////////////////////////////
// Site diagonal is identity, right preconditioned by Mee^inv
// ( 1 - Meo Moo^inv Moe Mee^inv ) phi =( 1 - Meo Moo^inv Moe Mee^inv ) Mee psi = = eta = eta
//=> psi = MeeInv phi
///////////////////////////////////////////////////////////////////////////////////////////////////////
template<class Field> class SchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field> {
public:
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
/////////////////////////////////////////////////////
// Wrap the usual normal equations Schur trick
/////////////////////////////////////////////////////
SchurRedBlackDiagTwoSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false,
const bool _solnAsInitGuess = false)
: SchurRedBlackBase<Field>(HermitianRBSolver,initSubGuess,_solnAsInitGuess) {};
virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix);
Field tmp(grid);
Field Mtmp(grid);
pickCheckerboard(Even,src_e,src);
pickCheckerboard(Odd ,src_o,src);
/////////////////////////////////////////////////////
// src_o = Mdag * (source_o - Moe MeeInv source_e)
/////////////////////////////////////////////////////
_Matrix.MooeeInv(src_e,tmp); assert( tmp.checkerboard ==Even);
_Matrix.Meooe (tmp,Mtmp); assert( Mtmp.checkerboard ==Odd);
tmp=src_o-Mtmp; assert( tmp.checkerboard ==Odd);
// get the right MpcDag
_HermOpEO.MpcDag(tmp,src_o); assert(src_o.checkerboard ==Odd);
}
virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol)
{
GridBase *grid = _Matrix.RedBlackGrid();
GridBase *fgrid= _Matrix.Grid();
Field sol_o_i(grid);
Field tmp(grid);
Field sol_e(grid);
////////////////////////////////////////////////
// MooeeInv due to pecond
////////////////////////////////////////////////
_Matrix.MooeeInv(sol_o,tmp);
sol_o_i = tmp;
///////////////////////////////////////////////////
// sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
///////////////////////////////////////////////////
_Matrix.Meooe(sol_o_i,tmp); assert( tmp.checkerboard ==Even);
tmp = src_e-tmp; assert( src_e.checkerboard ==Even);
_Matrix.MooeeInv(tmp,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_e); assert( sol_e.checkerboard ==Even);
setCheckerboard(sol,sol_o_i); assert( sol_o_i.checkerboard ==Odd );
};
virtual void RedBlackSolve (Matrix & _Matrix,const Field &src_o, Field &sol_o)
{
SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);
};
virtual void RedBlackSolve (Matrix & _Matrix,const std::vector<Field> &src_o, std::vector<Field> &sol_o)
{
SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix);
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);
}
};
}
#endif

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@ -1,3 +0,0 @@
#include <Grid/GridCore.h>
int Grid::BinaryIO::latticeWriteMaxRetry = -1;

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@ -1,142 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/qcd/action/fermion/DomainWallFermion.h
Copyright (C) 2015
Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
Author: Vera Guelpers <V.M.Guelpers@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_QCD_DOMAIN_WALL_FERMION_H
#define GRID_QCD_DOMAIN_WALL_FERMION_H
#include <Grid/qcd/action/fermion/FermionCore.h>
namespace Grid {
namespace QCD {
template<class Impl>
class DomainWallFermion : public CayleyFermion5D<Impl>
{
public:
INHERIT_IMPL_TYPES(Impl);
public:
void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary, std::vector<double> twist, bool fiveD) {
FermionField in_k(in._grid);
FermionField prop_k(in._grid);
FFT theFFT((GridCartesian *) in._grid);
//phase for boundary condition
ComplexField coor(in._grid);
ComplexField ph(in._grid); ph = zero;
FermionField in_buf(in._grid); in_buf = zero;
Scalar ci(0.0,1.0);
assert(twist.size() == Nd);//check that twist is Nd
assert(boundary.size() == Nd);//check that boundary conditions is Nd
int shift = 0;
if(fiveD) shift = 1;
for(unsigned int nu = 0; nu < Nd; nu++)
{
// Shift coordinate lattice index by 1 to account for 5th dimension.
LatticeCoordinate(coor, nu + shift);
double boundary_phase = ::acos(real(boundary[nu]));
ph = ph + boundary_phase*coor*((1./(in._grid->_fdimensions[nu+shift])));
//momenta for propagator shifted by twist+boundary
twist[nu] = twist[nu] + boundary_phase/((2.0*M_PI));
}
in_buf = exp(ci*ph*(-1.0))*in;
if(fiveD){//FFT only on temporal and spatial dimensions
std::vector<int> mask(Nd+1,1); mask[0] = 0;
theFFT.FFT_dim_mask(in_k,in_buf,mask,FFT::forward);
this->MomentumSpacePropagatorHt_5d(prop_k,in_k,mass,twist);
theFFT.FFT_dim_mask(out,prop_k,mask,FFT::backward);
}
else{
theFFT.FFT_all_dim(in_k,in,FFT::forward);
this->MomentumSpacePropagatorHt(prop_k,in_k,mass,twist);
theFFT.FFT_all_dim(out,prop_k,FFT::backward);
}
//phase for boundary condition
out = out * exp(ci*ph);
};
virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist) {
bool fiveD = true; //5d propagator by default
FreePropagator(in,out,mass,boundary,twist,fiveD);
};
virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass, bool fiveD) {
std::vector<double> twist(Nd,0.0); //default: periodic boundarys in all directions
std::vector<Complex> boundary;
for(int i=0;i<Nd;i++) boundary.push_back(1);//default: periodic boundary conditions
FreePropagator(in,out,mass,boundary,twist,fiveD);
};
virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass) {
bool fiveD = true; //5d propagator by default
std::vector<double> twist(Nd,0.0); //default: twist angle 0
std::vector<Complex> boundary;
for(int i=0;i<Nd;i++) boundary.push_back(1); //default: periodic boundary conditions
FreePropagator(in,out,mass,boundary,twist,fiveD);
};
virtual void Instantiatable(void) {};
// Constructors
DomainWallFermion(GaugeField &_Umu,
GridCartesian &FiveDimGrid,
GridRedBlackCartesian &FiveDimRedBlackGrid,
GridCartesian &FourDimGrid,
GridRedBlackCartesian &FourDimRedBlackGrid,
RealD _mass,RealD _M5,const ImplParams &p= ImplParams()) :
CayleyFermion5D<Impl>(_Umu,
FiveDimGrid,
FiveDimRedBlackGrid,
FourDimGrid,
FourDimRedBlackGrid,_mass,_M5,p)
{
RealD eps = 1.0;
Approx::zolotarev_data *zdata = Approx::higham(eps,this->Ls);// eps is ignored for higham
assert(zdata->n==this->Ls);
std::cout<<GridLogMessage << "DomainWallFermion with Ls="<<this->Ls<<std::endl;
// Call base setter
this->SetCoefficientsTanh(zdata,1.0,0.0);
Approx::zolotarev_free(zdata);
}
};
}
}
#endif

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@ -1,237 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/qcd/action/fermion/FourierAcceleratedPV.h
Copyright (C) 2015
Author: Christoph Lehner (lifted with permission by Peter Boyle, brought back to Grid)
Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#pragma once
namespace Grid {
namespace QCD {
template<typename M>
void get_real_const_bc(M& m, RealD& _b, RealD& _c) {
ComplexD b,c;
b=m.bs[0];
c=m.cs[0];
std::cout << GridLogMessage << "b=" << b << ", c=" << c << std::endl;
for (size_t i=1;i<m.bs.size();i++) {
assert(m.bs[i] == b);
assert(m.cs[i] == c);
}
assert(b.imag() == 0.0);
assert(c.imag() == 0.0);
_b = b.real();
_c = c.real();
}
template<typename Vi, typename M, typename G>
class FourierAcceleratedPV {
public:
ConjugateGradient<Vi> &cg;
M& dwfPV;
G& Umu;
GridCartesian* grid5D;
GridRedBlackCartesian* gridRB5D;
int group_in_s;
FourierAcceleratedPV(M& _dwfPV, G& _Umu, ConjugateGradient<Vi> &_cg, int _group_in_s = 2)
: dwfPV(_dwfPV), Umu(_Umu), cg(_cg), group_in_s(_group_in_s)
{
assert( dwfPV.FermionGrid()->_fdimensions[0] % (2*group_in_s) == 0);
grid5D = QCD::SpaceTimeGrid::makeFiveDimGrid(2*group_in_s, (GridCartesian*)Umu._grid);
gridRB5D = QCD::SpaceTimeGrid::makeFiveDimRedBlackGrid(2*group_in_s, (GridCartesian*)Umu._grid);
}
void rotatePV(const Vi& _src, Vi& dst, bool forward) const {
GridStopWatch gsw1, gsw2;
typedef typename Vi::scalar_type Coeff_t;
int Ls = dst._grid->_fdimensions[0];
Vi _tmp(dst._grid);
double phase = M_PI / (double)Ls;
Coeff_t bzero(0.0,0.0);
FFT theFFT((GridCartesian*)dst._grid);
if (!forward) {
gsw1.Start();
for (int s=0;s<Ls;s++) {
Coeff_t a(::cos(phase*s),-::sin(phase*s));
axpby_ssp(_tmp,a,_src,bzero,_src,s,s);
}
gsw1.Stop();
gsw2.Start();
theFFT.FFT_dim(dst,_tmp,0,FFT::forward);
gsw2.Stop();
} else {
gsw2.Start();
theFFT.FFT_dim(_tmp,_src,0,FFT::backward);
gsw2.Stop();
gsw1.Start();
for (int s=0;s<Ls;s++) {
Coeff_t a(::cos(phase*s),::sin(phase*s));
axpby_ssp(dst,a,_tmp,bzero,_tmp,s,s);
}
gsw1.Stop();
}
std::cout << GridLogMessage << "Timing rotatePV: " << gsw1.Elapsed() << ", " << gsw2.Elapsed() << std::endl;
}
void pvInv(const Vi& _src, Vi& _dst) const {
std::cout << GridLogMessage << "Fourier-Accelerated Outer Pauli Villars"<<std::endl;
typedef typename Vi::scalar_type Coeff_t;
int Ls = _dst._grid->_fdimensions[0];
GridStopWatch gswT;
gswT.Start();
RealD b,c;
get_real_const_bc(dwfPV,b,c);
RealD M5 = dwfPV.M5;
// U(true) Rightinv TMinv U(false) = Minv
Vi _src_diag(_dst._grid);
Vi _src_diag_slice(dwfPV.GaugeGrid());
Vi _dst_diag_slice(dwfPV.GaugeGrid());
Vi _src_diag_slices(grid5D);
Vi _dst_diag_slices(grid5D);
Vi _dst_diag(_dst._grid);
rotatePV(_src,_src_diag,false);
// now do TM solves
Gamma G5(Gamma::Algebra::Gamma5);
GridStopWatch gswA, gswB;
gswA.Start();
typedef typename M::Impl_t Impl;
//WilsonTMFermion<Impl> tm(x.Umu,*x.UGridF,*x.UrbGridF,0.0,0.0,solver_outer.parent.par.wparams_f);
std::vector<RealD> vmass(grid5D->_fdimensions[0],0.0);
std::vector<RealD> vmu(grid5D->_fdimensions[0],0.0);
WilsonTMFermion5D<Impl> tm(Umu,*grid5D,*gridRB5D,
*(GridCartesian*)dwfPV.GaugeGrid(),
*(GridRedBlackCartesian*)dwfPV.GaugeRedBlackGrid(),
vmass,vmu);
//SchurRedBlackDiagTwoSolve<Vi> sol(cg);
SchurRedBlackDiagMooeeSolve<Vi> sol(cg); // same performance as DiagTwo
gswA.Stop();
gswB.Start();
for (int sgroup=0;sgroup<Ls/2/group_in_s;sgroup++) {
for (int sidx=0;sidx<group_in_s;sidx++) {
int s = sgroup*group_in_s + sidx;
int sprime = Ls-s-1;
RealD phase = M_PI / (RealD)Ls * (2.0 * s + 1.0);
RealD cosp = ::cos(phase);
RealD sinp = ::sin(phase);
RealD denom = b*b + c*c + 2.0*b*c*cosp;
RealD mass = -(b*b*M5 + c*(1.0 - cosp + c*M5) + b*(-1.0 + cosp + 2.0*c*cosp*M5))/denom;
RealD mu = (b+c)*sinp/denom;
vmass[2*sidx + 0] = mass;
vmass[2*sidx + 1] = mass;
vmu[2*sidx + 0] = mu;
vmu[2*sidx + 1] = -mu;
}
tm.update(vmass,vmu);
for (int sidx=0;sidx<group_in_s;sidx++) {
int s = sgroup*group_in_s + sidx;
int sprime = Ls-s-1;
ExtractSlice(_src_diag_slice,_src_diag,s,0);
InsertSlice(_src_diag_slice,_src_diag_slices,2*sidx + 0,0);
ExtractSlice(_src_diag_slice,_src_diag,sprime,0);
InsertSlice(_src_diag_slice,_src_diag_slices,2*sidx + 1,0);
}
GridStopWatch gsw;
gsw.Start();
_dst_diag_slices = zero; // zero guess
sol(tm,_src_diag_slices,_dst_diag_slices);
gsw.Stop();
std::cout << GridLogMessage << "Solve[sgroup=" << sgroup << "] completed in " << gsw.Elapsed() << ", " << gswA.Elapsed() << std::endl;
for (int sidx=0;sidx<group_in_s;sidx++) {
int s = sgroup*group_in_s + sidx;
int sprime = Ls-s-1;
RealD phase = M_PI / (RealD)Ls * (2.0 * s + 1.0);
RealD cosp = ::cos(phase);
RealD sinp = ::sin(phase);
// now rotate with inverse of
Coeff_t pA = b + c*cosp;
Coeff_t pB = - Coeff_t(0.0,1.0)*c*sinp;
Coeff_t pABden = pA*pA - pB*pB;
// (pA + pB * G5) * (pA - pB*G5) = (pA^2 - pB^2)
ExtractSlice(_dst_diag_slice,_dst_diag_slices,2*sidx + 0,0);
_dst_diag_slice = (pA/pABden) * _dst_diag_slice - (pB/pABden) * (G5 * _dst_diag_slice);
InsertSlice(_dst_diag_slice,_dst_diag,s,0);
ExtractSlice(_dst_diag_slice,_dst_diag_slices,2*sidx + 1,0);
_dst_diag_slice = (pA/pABden) * _dst_diag_slice + (pB/pABden) * (G5 * _dst_diag_slice);
InsertSlice(_dst_diag_slice,_dst_diag,sprime,0);
}
}
gswB.Stop();
rotatePV(_dst_diag,_dst,true);
gswT.Stop();
std::cout << GridLogMessage << "PV completed in " << gswT.Elapsed() << " (Setup: " << gswA.Elapsed() << ", s-loop: " << gswB.Elapsed() << ")" << std::endl;
}
};
}}

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@ -1,193 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/MADWF.h
Copyright (C) 2015
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#pragma once
namespace Grid {
namespace QCD {
template <class Fieldi, class Fieldo,IfNotSame<Fieldi,Fieldo> X=0>
inline void convert(const Fieldi &from,Fieldo &to)
{
precisionChange(to,from);
}
template <class Fieldi, class Fieldo,IfSame<Fieldi,Fieldo> X=0>
inline void convert(const Fieldi &from,Fieldo &to)
{
to=from;
}
template<class Matrixo,class Matrixi,class PVinverter,class SchurSolver, class Guesser>
class MADWF
{
private:
typedef typename Matrixo::FermionField FermionFieldo;
typedef typename Matrixi::FermionField FermionFieldi;
PVinverter & PauliVillarsSolvero;// For the outer field
SchurSolver & SchurSolveri; // For the inner approx field
Guesser & Guesseri; // To deflate the inner approx solves
Matrixo & Mato; // Action object for outer
Matrixi & Mati; // Action object for inner
RealD target_resid;
int maxiter;
public:
MADWF(Matrixo &_Mato,
Matrixi &_Mati,
PVinverter &_PauliVillarsSolvero,
SchurSolver &_SchurSolveri,
Guesser & _Guesseri,
RealD resid,
int _maxiter) :
Mato(_Mato),Mati(_Mati),
SchurSolveri(_SchurSolveri),
PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri)
{
target_resid=resid;
maxiter =_maxiter;
};
void operator() (const FermionFieldo &src4,FermionFieldo &sol5)
{
std::cout << GridLogMessage<< " ************************************************" << std::endl;
std::cout << GridLogMessage<< " MADWF-like algorithm " << std::endl;
std::cout << GridLogMessage<< " ************************************************" << std::endl;
FermionFieldi c0i(Mati.GaugeGrid()); // 4d
FermionFieldi y0i(Mati.GaugeGrid()); // 4d
FermionFieldo c0 (Mato.GaugeGrid()); // 4d
FermionFieldo y0 (Mato.GaugeGrid()); // 4d
FermionFieldo A(Mato.FermionGrid()); // Temporary outer
FermionFieldo B(Mato.FermionGrid()); // Temporary outer
FermionFieldo b(Mato.FermionGrid()); // 5d source
FermionFieldo c(Mato.FermionGrid()); // PVinv source; reused so store
FermionFieldo defect(Mato.FermionGrid()); // 5d source
FermionFieldi ci(Mati.FermionGrid());
FermionFieldi yi(Mati.FermionGrid());
FermionFieldi xi(Mati.FermionGrid());
FermionFieldi srci(Mati.FermionGrid());
FermionFieldi Ai(Mati.FermionGrid());
RealD m=Mati.Mass();
///////////////////////////////////////
//Import source, include Dminus factors
///////////////////////////////////////
Mato.ImportPhysicalFermionSource(src4,b);
std::cout << GridLogMessage << " src4 " <<norm2(src4)<<std::endl;
std::cout << GridLogMessage << " b " <<norm2(b)<<std::endl;
defect = b;
sol5=zero;
for (int i=0;i<maxiter;i++) {
///////////////////////////////////////
// Set up c0 from current defect
///////////////////////////////////////
PauliVillarsSolvero(Mato,defect,A);
Mato.Pdag(A,c);
ExtractSlice(c0, c, 0 , 0);
////////////////////////////////////////////////
// Solve the inner system with surface term c0
////////////////////////////////////////////////
ci = zero;
convert(c0,c0i); // Possible precison change
InsertSlice(c0i,ci,0, 0);
// Dwm P y = Dwm x = D(1) P (c0,0,0,0)^T
Mati.P(ci,Ai);
Mati.SetMass(1.0); Mati.M(Ai,srci); Mati.SetMass(m);
SchurSolveri(Mati,srci,xi,Guesseri);
Mati.Pdag(xi,yi);
ExtractSlice(y0i, yi, 0 , 0);
convert(y0i,y0); // Possible precision change
//////////////////////////////////////
// Propagate solution back to outer system
// Build Pdag PV^-1 Dm P [-sol4,c2,c3... cL]
//////////////////////////////////////
c0 = - y0;
InsertSlice(c0, c, 0 , 0);
/////////////////////////////
// Reconstruct the bulk solution Pdag PV^-1 Dm P
/////////////////////////////
Mato.P(c,B);
Mato.M(B,A);
PauliVillarsSolvero(Mato,A,B);
Mato.Pdag(B,A);
//////////////////////////////
// Reinsert surface prop
//////////////////////////////
InsertSlice(y0,A,0,0);
//////////////////////////////
// Convert from y back to x
//////////////////////////////
Mato.P(A,B);
// sol5' = sol5 + M^-1 defect
// = sol5 + M^-1 src - M^-1 M sol5 ...
sol5 = sol5 + B;
std::cout << GridLogMessage << "***************************************" <<std::endl;
std::cout << GridLogMessage << " Sol5 update "<<std::endl;
std::cout << GridLogMessage << "***************************************" <<std::endl;
std::cout << GridLogMessage << " Sol5 now "<<norm2(sol5)<<std::endl;
std::cout << GridLogMessage << " delta "<<norm2(B)<<std::endl;
// New defect = b - M sol5
Mato.M(sol5,A);
defect = b - A;
std::cout << GridLogMessage << " defect "<<norm2(defect)<<std::endl;
double resid = ::sqrt(norm2(defect) / norm2(b));
std::cout << GridLogMessage << "Residual " << i << ": " << resid << std::endl;
std::cout << GridLogMessage << "***************************************" <<std::endl;
if (resid < target_resid) {
return;
}
}
std::cout << GridLogMessage << "MADWF : Exceeded maxiter "<<std::endl;
assert(0);
}
};
}}

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@ -1,95 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/SchurRedBlack.h
Copyright (C) 2015
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#pragma once
namespace Grid {
namespace QCD {
template<class Field>
class PauliVillarsSolverUnprec
{
public:
ConjugateGradient<Field> & CG;
PauliVillarsSolverUnprec( ConjugateGradient<Field> &_CG) : CG(_CG){};
template<class Matrix>
void operator() (Matrix &_Matrix,const Field &src,Field &sol)
{
RealD m = _Matrix.Mass();
Field A (_Matrix.FermionGrid());
MdagMLinearOperator<Matrix,Field> HermOp(_Matrix);
_Matrix.SetMass(1.0);
_Matrix.Mdag(src,A);
CG(HermOp,A,sol);
_Matrix.SetMass(m);
};
};
template<class Field,class SchurSolverType>
class PauliVillarsSolverRBprec
{
public:
SchurSolverType & SchurSolver;
PauliVillarsSolverRBprec( SchurSolverType &_SchurSolver) : SchurSolver(_SchurSolver){};
template<class Matrix>
void operator() (Matrix &_Matrix,const Field &src,Field &sol)
{
RealD m = _Matrix.Mass();
Field A (_Matrix.FermionGrid());
_Matrix.SetMass(1.0);
SchurSolver(_Matrix,src,sol);
_Matrix.SetMass(m);
};
};
template<class Field,class GaugeField>
class PauliVillarsSolverFourierAccel
{
public:
GaugeField & Umu;
ConjugateGradient<Field> & CG;
PauliVillarsSolverFourierAccel(GaugeField &_Umu,ConjugateGradient<Field> &_CG) : Umu(_Umu), CG(_CG)
{
};
template<class Matrix>
void operator() (Matrix &_Matrix,const Field &src,Field &sol)
{
FourierAcceleratedPV<Field, Matrix, typename Matrix::GaugeField > faPV(_Matrix,Umu,CG) ;
faPV.pvInv(src,sol);
};
};
}
}

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@ -1,135 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/algorithms/iterative/SchurRedBlack.h
Copyright (C) 2015
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#pragma once
namespace Grid {
namespace QCD {
template<class Field,class PVinverter> class Reconstruct5DfromPhysical {
private:
PVinverter & PauliVillarsSolver;
public:
/////////////////////////////////////////////////////
// First cut works, 10 Oct 2018.
//
// Must form a plan to get this into production for Zmobius acceleration
// of the Mobius exact AMA corrections.
//
// TODO : understand absence of contact term in eqns in Hantao's thesis
// sol4 is contact term subtracted, but thesis & Brower's paper suggests not.
//
// Step 1: Localise PV inverse in a routine. [DONE]
// Step 2: Schur based PV inverse [DONE]
// Step 3: Fourier accelerated PV inverse [DONE]
//
/////////////////////////////////////////////////////
Reconstruct5DfromPhysical(PVinverter &_PauliVillarsSolver)
: PauliVillarsSolver(_PauliVillarsSolver)
{
};
template<class Matrix>
void PV(Matrix &_Matrix,const Field &src,Field &sol)
{
RealD m = _Matrix.Mass();
_Matrix.SetMass(1.0);
_Matrix.M(src,sol);
_Matrix.SetMass(m);
}
template<class Matrix>
void PVdag(Matrix &_Matrix,const Field &src,Field &sol)
{
RealD m = _Matrix.Mass();
_Matrix.SetMass(1.0);
_Matrix.Mdag(src,sol);
_Matrix.SetMass(m);
}
template<class Matrix>
void operator() (Matrix & _Matrix,const Field &sol4,const Field &src4, Field &sol5){
int Ls = _Matrix.Ls;
Field psi4(_Matrix.GaugeGrid());
Field psi(_Matrix.FermionGrid());
Field A (_Matrix.FermionGrid());
Field B (_Matrix.FermionGrid());
Field c (_Matrix.FermionGrid());
typedef typename Matrix::Coeff_t Coeff_t;
std::cout << GridLogMessage<< " ************************************************" << std::endl;
std::cout << GridLogMessage<< " Reconstruct5Dprop: c.f. MADWF algorithm " << std::endl;
std::cout << GridLogMessage<< " ************************************************" << std::endl;
///////////////////////////////////////
//Import source, include Dminus factors
///////////////////////////////////////
_Matrix.ImportPhysicalFermionSource(src4,B);
///////////////////////////////////////
// Set up c from src4
///////////////////////////////////////
PauliVillarsSolver(_Matrix,B,A);
_Matrix.Pdag(A,c);
//////////////////////////////////////
// Build Pdag PV^-1 Dm P [-sol4,c2,c3... cL]
//////////////////////////////////////
psi4 = - sol4;
InsertSlice(psi4, psi, 0 , 0);
for (int s=1;s<Ls;s++) {
ExtractSlice(psi4,c,s,0);
InsertSlice(psi4,psi,s,0);
}
/////////////////////////////
// Pdag PV^-1 Dm P
/////////////////////////////
_Matrix.P(psi,B);
_Matrix.M(B,A);
PauliVillarsSolver(_Matrix,A,B);
_Matrix.Pdag(B,A);
//////////////////////////////
// Reinsert surface prop
//////////////////////////////
InsertSlice(sol4,A,0,0);
//////////////////////////////
// Convert from y back to x
//////////////////////////////
_Matrix.P(A,sol5);
}
};
}
}

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@ -1,155 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/qcd/action/fermion/WilsonTMFermion5D.h
Copyright (C) 2015
Author: paboyle <paboyle@ph.ed.ac.uk> ; NB Christoph did similar in GPT
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#pragma once
#include <Grid/qcd/action/fermion/FermionCore.h>
#include <Grid/qcd/action/fermion/WilsonFermion.h>
namespace Grid {
namespace QCD {
template<class Impl>
class WilsonTMFermion5D : public WilsonFermion5D<Impl>
{
public:
INHERIT_IMPL_TYPES(Impl);
public:
virtual void Instantiatable(void) {};
// Constructors
WilsonTMFermion5D(GaugeField &_Umu,
GridCartesian &Fgrid,
GridRedBlackCartesian &Frbgrid,
GridCartesian &Ugrid,
GridRedBlackCartesian &Urbgrid,
const std::vector<RealD> _mass,
const std::vector<RealD> _mu,
const ImplParams &p= ImplParams()
) :
WilsonFermion5D<Impl>(_Umu,
Fgrid,
Frbgrid,
Ugrid,
Urbgrid,
4.0,p)
{
update(_mass,_mu);
}
virtual void Meooe(const FermionField &in, FermionField &out) {
if (in.checkerboard == Odd) {
this->DhopEO(in, out, DaggerNo);
} else {
this->DhopOE(in, out, DaggerNo);
}
}
virtual void MeooeDag(const FermionField &in, FermionField &out) {
if (in.checkerboard == Odd) {
this->DhopEO(in, out, DaggerYes);
} else {
this->DhopOE(in, out, DaggerYes);
}
}
// allow override for twisted mass and clover
virtual void Mooee(const FermionField &in, FermionField &out) {
out.checkerboard = in.checkerboard;
//axpibg5x(out,in,a,b); // out = a*in + b*i*G5*in
for (int s=0;s<(int)this->mass.size();s++) {
ComplexD a = 4.0+this->mass[s];
ComplexD b(0.0,this->mu[s]);
axpbg5y_ssp(out,a,in,b,in,s,s);
}
}
virtual void MooeeDag(const FermionField &in, FermionField &out) {
out.checkerboard = in.checkerboard;
for (int s=0;s<(int)this->mass.size();s++) {
ComplexD a = 4.0+this->mass[s];
ComplexD b(0.0,-this->mu[s]);
axpbg5y_ssp(out,a,in,b,in,s,s);
}
}
virtual void MooeeInv(const FermionField &in, FermionField &out) {
for (int s=0;s<(int)this->mass.size();s++) {
RealD m = this->mass[s];
RealD tm = this->mu[s];
RealD mtil = 4.0+this->mass[s];
RealD sq = mtil*mtil+tm*tm;
ComplexD a = mtil/sq;
ComplexD b(0.0, -tm /sq);
axpbg5y_ssp(out,a,in,b,in,s,s);
}
}
virtual void MooeeInvDag(const FermionField &in, FermionField &out) {
for (int s=0;s<(int)this->mass.size();s++) {
RealD m = this->mass[s];
RealD tm = this->mu[s];
RealD mtil = 4.0+this->mass[s];
RealD sq = mtil*mtil+tm*tm;
ComplexD a = mtil/sq;
ComplexD b(0.0,tm /sq);
axpbg5y_ssp(out,a,in,b,in,s,s);
}
}
virtual RealD M(const FermionField &in, FermionField &out) {
out.checkerboard = in.checkerboard;
this->Dhop(in, out, DaggerNo);
FermionField tmp(out._grid);
for (int s=0;s<(int)this->mass.size();s++) {
ComplexD a = 4.0+this->mass[s];
ComplexD b(0.0,this->mu[s]);
axpbg5y_ssp(tmp,a,in,b,in,s,s);
}
return axpy_norm(out, 1.0, tmp, out);
}
// needed for fast PV
void update(const std::vector<RealD>& _mass, const std::vector<RealD>& _mu) {
assert(_mass.size() == _mu.size());
assert(_mass.size() == this->FermionGrid()->_fdimensions[0]);
this->mass = _mass;
this->mu = _mu;
}
private:
std::vector<RealD> mu;
std::vector<RealD> mass;
};
typedef WilsonTMFermion5D<WilsonImplF> WilsonTMFermion5DF;
typedef WilsonTMFermion5D<WilsonImplD> WilsonTMFermion5DD;
}}

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@ -1,331 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/qcd/action/gauge/Photon.h
Copyright (C) 2015-2018
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
Author: Antonin Portelli <antonin.portelli@me.com>
Author: James Harrison <J.Harrison@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef QCD_PHOTON_ACTION_H
#define QCD_PHOTON_ACTION_H
namespace Grid{
namespace QCD{
template <class S>
class QedGImpl
{
public:
typedef S Simd;
typedef typename Simd::scalar_type Scalar;
template <typename vtype>
using iImplGaugeLink = iScalar<iScalar<iScalar<vtype>>>;
template <typename vtype>
using iImplGaugeField = iVector<iScalar<iScalar<vtype>>, Nd>;
typedef iImplGaugeLink<Simd> SiteLink;
typedef iImplGaugeField<Simd> SiteField;
typedef SiteLink SiteComplex;
typedef Lattice<SiteLink> LinkField;
typedef Lattice<SiteField> Field;
typedef Field ComplexField;
};
typedef QedGImpl<vComplex> QedGImplR;
template <class GImpl>
class Photon
{
public:
INHERIT_GIMPL_TYPES(GImpl);
typedef typename SiteGaugeLink::scalar_object ScalarSite;
typedef typename ScalarSite::scalar_type ScalarComplex;
GRID_SERIALIZABLE_ENUM(Gauge, undef, feynman, 1, coulomb, 2, landau, 3);
GRID_SERIALIZABLE_ENUM(ZmScheme, undef, qedL, 1, qedTL, 2);
public:
Photon(GridBase *grid, Gauge gauge, ZmScheme zmScheme, std::vector<Real> improvement);
Photon(GridBase *grid, Gauge gauge, ZmScheme zmScheme);
virtual ~Photon(void) = default;
void FreePropagator(const GaugeField &in, GaugeField &out);
void MomentumSpacePropagator(const GaugeField &in, GaugeField &out);
void StochasticWeight(GaugeLinkField &weight);
void StochasticField(GaugeField &out, GridParallelRNG &rng);
void StochasticField(GaugeField &out, GridParallelRNG &rng,
const GaugeLinkField &weight);
void UnitField(GaugeField &out);
private:
void makeSpatialNorm(LatticeInteger &spNrm);
void makeKHat(std::vector<GaugeLinkField> &khat);
void makeInvKHatSquared(GaugeLinkField &out);
void zmSub(GaugeLinkField &out);
void transverseProjectSpatial(GaugeField &out);
void gaugeTransform(GaugeField &out);
private:
GridBase *grid_;
Gauge gauge_;
ZmScheme zmScheme_;
std::vector<Real> improvement_;
};
typedef Photon<QedGImplR> PhotonR;
template<class GImpl>
Photon<GImpl>::Photon(GridBase *grid, Gauge gauge, ZmScheme zmScheme,
std::vector<Real> improvements)
: grid_(grid), gauge_(gauge), zmScheme_(zmScheme), improvement_(improvements)
{}
template<class GImpl>
Photon<GImpl>::Photon(GridBase *grid, Gauge gauge, ZmScheme zmScheme)
: Photon(grid, gauge, zmScheme, std::vector<Real>())
{}
template<class GImpl>
void Photon<GImpl>::FreePropagator(const GaugeField &in, GaugeField &out)
{
FFT theFFT(dynamic_cast<GridCartesian *>(grid_));
GaugeField in_k(grid_);
GaugeField prop_k(grid_);
theFFT.FFT_all_dim(in_k, in, FFT::forward);
MomentumSpacePropagator(prop_k, in_k);
theFFT.FFT_all_dim(out, prop_k, FFT::backward);
}
template<class GImpl>
void Photon<GImpl>::makeSpatialNorm(LatticeInteger &spNrm)
{
LatticeInteger coor(grid_);
std::vector<int> l = grid_->FullDimensions();
spNrm = zero;
for(int mu = 0; mu < grid_->Nd() - 1; mu++)
{
LatticeCoordinate(coor, mu);
coor = where(coor < Integer(l[mu]/2), coor, coor - Integer(l[mu]));
spNrm = spNrm + coor*coor;
}
}
template<class GImpl>
void Photon<GImpl>::makeKHat(std::vector<GaugeLinkField> &khat)
{
const unsigned int nd = grid_->Nd();
std::vector<int> l = grid_->FullDimensions();
Complex ci(0., 1.);
khat.resize(nd, grid_);
for (unsigned int mu = 0; mu < nd; ++mu)
{
Real piL = M_PI/l[mu];
LatticeCoordinate(khat[mu], mu);
khat[mu] = exp(piL*ci*khat[mu])*2.*sin(piL*khat[mu]);
}
}
template<class GImpl>
void Photon<GImpl>::makeInvKHatSquared(GaugeLinkField &out)
{
std::vector<GaugeLinkField> khat;
GaugeLinkField lone(grid_);
const unsigned int nd = grid_->Nd();
std::vector<int> zm(nd, 0);
ScalarSite one = ScalarComplex(1., 0.), z = ScalarComplex(0., 0.);
out = zero;
makeKHat(khat);
for(int mu = 0; mu < nd; mu++)
{
out = out + khat[mu]*conjugate(khat[mu]);
}
lone = ScalarComplex(1., 0.);
pokeSite(one, out, zm);
out = lone/out;
pokeSite(z, out, zm);
}
template<class GImpl>
void Photon<GImpl>::zmSub(GaugeLinkField &out)
{
switch (zmScheme_)
{
case ZmScheme::qedTL:
{
std::vector<int> zm(grid_->Nd(), 0);
ScalarSite z = ScalarComplex(0., 0.);
pokeSite(z, out, zm);
break;
}
case ZmScheme::qedL:
{
LatticeInteger spNrm(grid_);
makeSpatialNorm(spNrm);
out = where(spNrm == Integer(0), 0.*out, out);
for(int i = 0; i < improvement_.size(); i++)
{
Real f = sqrt(improvement_[i] + 1);
out = where(spNrm == Integer(i + 1), f*out, out);
}
break;
}
default:
assert(0);
break;
}
}
template<class GImpl>
void Photon<GImpl>::transverseProjectSpatial(GaugeField &out)
{
const unsigned int nd = grid_->Nd();
GaugeLinkField invKHat(grid_), cst(grid_), spdiv(grid_);
LatticeInteger spNrm(grid_);
std::vector<GaugeLinkField> khat, a(nd, grid_), aProj(nd, grid_);
invKHat = zero;
makeSpatialNorm(spNrm);
makeKHat(khat);
for (unsigned int mu = 0; mu < nd; ++mu)
{
a[mu] = peekLorentz(out, mu);
if (mu < nd - 1)
{
invKHat += khat[mu]*conjugate(khat[mu]);
}
}
cst = ScalarComplex(1., 0.);
invKHat = where(spNrm == Integer(0), cst, invKHat);
invKHat = cst/invKHat;
cst = zero;
invKHat = where(spNrm == Integer(0), cst, invKHat);
spdiv = zero;
for (unsigned int nu = 0; nu < nd - 1; ++nu)
{
spdiv += conjugate(khat[nu])*a[nu];
}
spdiv *= invKHat;
for (unsigned int mu = 0; mu < nd; ++mu)
{
aProj[mu] = a[mu] - khat[mu]*spdiv;
pokeLorentz(out, aProj[mu], mu);
}
}
template<class GImpl>
void Photon<GImpl>::gaugeTransform(GaugeField &out)
{
switch (gauge_)
{
case Gauge::feynman:
break;
case Gauge::coulomb:
transverseProjectSpatial(out);
break;
case Gauge::landau:
assert(0);
break;
default:
assert(0);
break;
}
}
template<class GImpl>
void Photon<GImpl>::MomentumSpacePropagator(const GaugeField &in,
GaugeField &out)
{
LatticeComplex momProp(grid_);
makeInvKHatSquared(momProp);
zmSub(momProp);
out = in*momProp;
}
template<class GImpl>
void Photon<GImpl>::StochasticWeight(GaugeLinkField &weight)
{
const unsigned int nd = grid_->Nd();
std::vector<int> l = grid_->FullDimensions();
Integer vol = 1;
for(unsigned int mu = 0; mu < nd; mu++)
{
vol = vol*l[mu];
}
makeInvKHatSquared(weight);
weight = sqrt(vol)*sqrt(weight);
zmSub(weight);
}
template<class GImpl>
void Photon<GImpl>::StochasticField(GaugeField &out, GridParallelRNG &rng)
{
GaugeLinkField weight(grid_);
StochasticWeight(weight);
StochasticField(out, rng, weight);
}
template<class GImpl>
void Photon<GImpl>::StochasticField(GaugeField &out, GridParallelRNG &rng,
const GaugeLinkField &weight)
{
const unsigned int nd = grid_->Nd();
GaugeLinkField r(grid_);
GaugeField aTilde(grid_);
FFT fft(dynamic_cast<GridCartesian *>(grid_));
for(unsigned int mu = 0; mu < nd; mu++)
{
gaussian(rng, r);
r = weight*r;
pokeLorentz(aTilde, r, mu);
}
gaugeTransform(aTilde);
fft.FFT_all_dim(out, aTilde, FFT::backward);
out = real(out);
}
template<class GImpl>
void Photon<GImpl>::UnitField(GaugeField &out)
{
const unsigned int nd = grid_->Nd();
GaugeLinkField r(grid_);
r = ScalarComplex(1., 0.);
for(unsigned int mu = 0; mu < nd; mu++)
{
pokeLorentz(out, r, mu);
}
out = real(out);
}
}}
#endif

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@ -1,53 +0,0 @@
#pragma once
namespace Grid{
namespace QCD{
template<class Field>
void HighBoundCheck(LinearOperatorBase<Field> &HermOp,
Field &Phi,
RealD hi)
{
// Eigenvalue bound check at high end
PowerMethod<Field> power_method;
auto lambda_max = power_method(HermOp,Phi);
std::cout << GridLogMessage << "Pseudofermion action lamda_max "<<lambda_max<<"( bound "<<hi<<")"<<std::endl;
assert( (lambda_max < hi) && " High Bounds Check on operator failed" );
}
template<class Field> void InverseSqrtBoundsCheck(int MaxIter,double tol,
LinearOperatorBase<Field> &HermOp,
Field &GaussNoise,
MultiShiftFunction &PowerNegHalf)
{
GridBase *FermionGrid = GaussNoise._grid;
Field X(FermionGrid);
Field Y(FermionGrid);
Field Z(FermionGrid);
X=GaussNoise;
RealD Nx = norm2(X);
ConjugateGradientMultiShift<Field> msCG(MaxIter,PowerNegHalf);
msCG(HermOp,X,Y);
msCG(HermOp,Y,Z);
RealD Nz = norm2(Z);
HermOp.HermOp(Z,Y);
RealD Ny = norm2(Y);
X=X-Y;
RealD Nd = norm2(X);
std::cout << "************************* "<<std::endl;
std::cout << " noise = "<<Nx<<std::endl;
std::cout << " (MdagM^-1/2)^2 noise = "<<Nz<<std::endl;
std::cout << " MdagM (MdagM^-1/2)^2 noise = "<<Ny<<std::endl;
std::cout << " noise - MdagM (MdagM^-1/2)^2 noise = "<<Nd<<std::endl;
std::cout << "************************* "<<std::endl;
assert( (std::sqrt(Nd/Nx)<tol) && " InverseSqrtBoundsCheck ");
}
}
}

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@ -1,87 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/qcd/action/scalar/CovariantLaplacian.h
Copyright (C) 2016
Author: Azusa Yamaguchi
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
#pragma once
namespace Grid {
namespace QCD {
template <class Gimpl> class CovariantSmearing : public Gimpl
{
public:
INHERIT_GIMPL_TYPES(Gimpl);
typedef typename Gimpl::GaugeLinkField GaugeMat;
typedef typename Gimpl::GaugeField GaugeLorentz;
template<typename T>
static void GaussianSmear(const std::vector<LatticeColourMatrix>& U,
T& chi,
const Real& width, int Iterations, int orthog)
{
GridBase *grid = chi._grid;
T psi(grid);
////////////////////////////////////////////////////////////////////////////////////
// Follow Chroma conventions for width to keep compatibility with previous data
// Free field iterates
// chi = (1 - w^2/4N p^2)^N chi
//
// ~ (e^(-w^2/4N p^2)^N chi
// ~ (e^(-w^2/4 p^2) chi
// ~ (e^(-w'^2/2 p^2) chi [ w' = w/sqrt(2) ]
//
// Which in coordinate space is proportional to
//
// e^(-x^2/w^2) = e^(-x^2/2w'^2)
//
// The 4 is a bit unconventional from Gaussian width perspective, but... it's Chroma convention.
// 2nd derivative approx d^2/dx^2 = x+mu + x-mu - 2x
//
// d^2/dx^2 = - p^2
//
// chi = ( 1 + w^2/4N d^2/dx^2 )^N chi
//
////////////////////////////////////////////////////////////////////////////////////
Real coeff = (width*width) / Real(4*Iterations);
int dims = Nd;
if( orthog < Nd ) dims=Nd-1;
for(int n = 0; n < Iterations; ++n) {
psi = (-2.0*dims)*chi;
for(int mu=0;mu<Nd;mu++) {
if ( mu != orthog ) {
psi = psi + Gimpl::CovShiftForward(U[mu],mu,chi);
psi = psi + Gimpl::CovShiftBackward(U[mu],mu,chi);
}
}
chi = chi + coeff*psi;
}
}
};
}}

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@ -1,660 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/serialisation/BaseIO.h
Copyright (C) 2015
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
Author: Guido Cossu <guido.cossu@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef GRID_SERIALISATION_ABSTRACT_READER_H
#define GRID_SERIALISATION_ABSTRACT_READER_H
#include <type_traits>
#include <Grid/tensors/Tensors.h>
#include <Grid/serialisation/VectorUtils.h>
#include <Grid/Eigen/unsupported/CXX11/Tensor>
namespace Grid {
namespace EigenIO {
// EigenIO works for scalars that are not just Grid supported scalars
template<typename T, typename V = void> struct is_complex : public std::false_type {};
// Support all complex types (not just Grid complex types) - even if the definitions overlap (!)
template<typename T> struct is_complex< T , typename
std::enable_if< ::Grid::is_complex< T >::value>::type> : public std::true_type {};
template<typename T> struct is_complex<std::complex<T>, typename
std::enable_if<!::Grid::is_complex<std::complex<T>>::value>::type> : public std::true_type {};
// Helpers to support I/O for Eigen tensors of arithmetic scalars, complex types, or Grid tensors
template<typename T, typename V = void> struct is_scalar : public std::false_type {};
template<typename T> struct is_scalar<T, typename std::enable_if<std::is_arithmetic<T>::value || is_complex<T>::value>::type> : public std::true_type {};
// Is this an Eigen tensor
template<typename T> struct is_tensor : std::integral_constant<bool,
std::is_base_of<Eigen::TensorBase<T, Eigen::ReadOnlyAccessors>, T>::value> {};
// Is this an Eigen tensor of a supported scalar
template<typename T, typename V = void> struct is_tensor_of_scalar : public std::false_type {};
template<typename T> struct is_tensor_of_scalar<T, typename std::enable_if<is_tensor<T>::value && is_scalar<typename T::Scalar>::value>::type> : public std::true_type {};
// Is this an Eigen tensor of a supported container
template<typename T, typename V = void> struct is_tensor_of_container : public std::false_type {};
template<typename T> struct is_tensor_of_container<T, typename std::enable_if<is_tensor<T>::value && isGridTensor<typename T::Scalar>::value>::type> : public std::true_type {};
// These traits describe the scalars inside Eigen tensors
// I wish I could define these in reference to the scalar type (so there would be fewer traits defined)
// but I'm unable to find a syntax to make this work
template<typename T, typename V = void> struct Traits {};
// Traits are the default for scalars, or come from GridTypeMapper for GridTensors
template<typename T> struct Traits<T, typename std::enable_if<is_tensor_of_scalar<T>::value>::type>
: public GridTypeMapper_Base {
using scalar_type = typename T::Scalar; // ultimate base scalar
static constexpr bool is_complex = ::Grid::EigenIO::is_complex<scalar_type>::value;
};
// Traits are the default for scalars, or come from GridTypeMapper for GridTensors
template<typename T> struct Traits<T, typename std::enable_if<is_tensor_of_container<T>::value>::type> {
using BaseTraits = GridTypeMapper<typename T::Scalar>;
using scalar_type = typename BaseTraits::scalar_type; // ultimate base scalar
static constexpr bool is_complex = ::Grid::EigenIO::is_complex<scalar_type>::value;
static constexpr int TensorLevel = BaseTraits::TensorLevel;
static constexpr int Rank = BaseTraits::Rank;
static constexpr std::size_t count = BaseTraits::count;
static constexpr int Dimension(int dim) { return BaseTraits::Dimension(dim); }
};
// Is this a fixed-size Eigen tensor
template<typename T> struct is_tensor_fixed : public std::false_type {};
template<typename Scalar_, typename Dimensions_, int Options_, typename IndexType>
struct is_tensor_fixed<Eigen::TensorFixedSize<Scalar_, Dimensions_, Options_, IndexType>>
: public std::true_type {};
template<typename Scalar_, typename Dimensions_, int Options_, typename IndexType,
int MapOptions_, template <class> class MapPointer_>
struct is_tensor_fixed<Eigen::TensorMap<Eigen::TensorFixedSize<Scalar_, Dimensions_,
Options_, IndexType>, MapOptions_, MapPointer_>>
: public std::true_type {};
// Is this a variable-size Eigen tensor
template<typename T, typename V = void> struct is_tensor_variable : public std::false_type {};
template<typename T> struct is_tensor_variable<T, typename std::enable_if<is_tensor<T>::value
&& !is_tensor_fixed<T>::value>::type> : public std::true_type {};
}
// Abstract writer/reader classes ////////////////////////////////////////////
// static polymorphism implemented using CRTP idiom
class Serializable;
// Static abstract writer
template <typename T>
class Writer
{
public:
Writer(void);
virtual ~Writer(void) = default;
void push(const std::string &s);
void pop(void);
template <typename U>
typename std::enable_if<std::is_base_of<Serializable, U>::value>::type
write(const std::string& s, const U &output);
template <typename U>
typename std::enable_if<!std::is_base_of<Serializable, U>::value && !EigenIO::is_tensor<U>::value>::type
write(const std::string& s, const U &output);
template <typename U>
void write(const std::string &s, const iScalar<U> &output);
template <typename U, int N>
void write(const std::string &s, const iVector<U, N> &output);
template <typename U, int N>
void write(const std::string &s, const iMatrix<U, N> &output);
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor<ETensor>::value>::type
write(const std::string &s, const ETensor &output);
// Helper functions for Scalar vs Container specialisations
template <typename ETensor>
inline typename std::enable_if<EigenIO::is_tensor_of_scalar<ETensor>::value,
const typename ETensor::Scalar *>::type
getFirstScalar(const ETensor &output)
{
return output.data();
}
template <typename ETensor>
inline typename std::enable_if<EigenIO::is_tensor_of_container<ETensor>::value,
const typename EigenIO::Traits<ETensor>::scalar_type *>::type
getFirstScalar(const ETensor &output)
{
return output.data()->begin();
}
template <typename S>
inline typename std::enable_if<EigenIO::is_scalar<S>::value, void>::type
copyScalars(S * &pCopy, const S &Source)
{
* pCopy ++ = Source;
}
template <typename S>
inline typename std::enable_if<isGridTensor<S>::value, void>::type
copyScalars(typename GridTypeMapper<S>::scalar_type * &pCopy, const S &Source)
{
for( const typename GridTypeMapper<S>::scalar_type &item : Source )
* pCopy ++ = item;
}
void scientificFormat(const bool set);
bool isScientific(void);
void setPrecision(const unsigned int prec);
unsigned int getPrecision(void);
private:
T *upcast;
bool scientific_{false};
unsigned int prec_{0};
};
// Static abstract reader
template <typename T>
class Reader
{
public:
Reader(void);
virtual ~Reader(void) = default;
bool push(const std::string &s);
void pop(void);
template <typename U>
typename std::enable_if<std::is_base_of<Serializable, U>::value, void>::type
read(const std::string& s, U &output);
template <typename U>
typename std::enable_if<!std::is_base_of<Serializable, U>::value
&& !EigenIO::is_tensor<U>::value, void>::type
read(const std::string& s, U &output);
template <typename U>
void read(const std::string &s, iScalar<U> &output);
template <typename U, int N>
void read(const std::string &s, iVector<U, N> &output);
template <typename U, int N>
void read(const std::string &s, iMatrix<U, N> &output);
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor<ETensor>::value, void>::type
read(const std::string &s, ETensor &output);
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor_fixed<ETensor>::value, void>::type
Reshape(ETensor &t, const std::array<typename ETensor::Index, ETensor::NumDimensions> &dims );
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor_variable<ETensor>::value, void>::type
Reshape(ETensor &t, const std::array<typename ETensor::Index, ETensor::NumDimensions> &dims );
// Helper functions for Scalar vs Container specialisations
template <typename S>
inline typename std::enable_if<EigenIO::is_scalar<S>::value, void>::type
copyScalars(S &Dest, const S * &pSource)
{
Dest = * pSource ++;
}
template <typename S>
inline typename std::enable_if<isGridTensor<S>::value, void>::type
copyScalars(S &Dest, const typename GridTypeMapper<S>::scalar_type * &pSource)
{
for( typename GridTypeMapper<S>::scalar_type &item : Dest )
item = * pSource ++;
}
protected:
template <typename U>
void fromString(U &output, const std::string &s);
private:
T *upcast;
};
// What is the vtype
template<typename T> struct isReader {
static const bool value = false;
};
template<typename T> struct isWriter {
static const bool value = false;
};
// Writer template implementation
template <typename T>
Writer<T>::Writer(void)
{
upcast = static_cast<T *>(this);
}
template <typename T>
void Writer<T>::push(const std::string &s)
{
upcast->push(s);
}
template <typename T>
void Writer<T>::pop(void)
{
upcast->pop();
}
template <typename T>
template <typename U>
typename std::enable_if<std::is_base_of<Serializable, U>::value, void>::type
Writer<T>::write(const std::string &s, const U &output)
{
U::write(*this, s, output);
}
template <typename T>
template <typename U>
typename std::enable_if<!std::is_base_of<Serializable, U>::value
&& !EigenIO::is_tensor<U>::value, void>::type
Writer<T>::write(const std::string &s, const U &output)
{
upcast->writeDefault(s, output);
}
template <typename T>
template <typename U>
void Writer<T>::write(const std::string &s, const iScalar<U> &output)
{
upcast->writeDefault(s, tensorToVec(output));
}
template <typename T>
template <typename U, int N>
void Writer<T>::write(const std::string &s, const iVector<U, N> &output)
{
upcast->writeDefault(s, tensorToVec(output));
}
template <typename T>
template <typename U, int N>
void Writer<T>::write(const std::string &s, const iMatrix<U, N> &output)
{
upcast->writeDefault(s, tensorToVec(output));
}
// Eigen::Tensors of Grid tensors (iScalar, iVector, iMatrix)
template <typename T>
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor<ETensor>::value, void>::type
Writer<T>::write(const std::string &s, const ETensor &output)
{
using Index = typename ETensor::Index;
using Container = typename ETensor::Scalar; // NB: could be same as scalar
using Traits = EigenIO::Traits<ETensor>;
using Scalar = typename Traits::scalar_type; // type of the underlying scalar
constexpr unsigned int TensorRank{ETensor::NumIndices};
constexpr unsigned int ContainerRank{Traits::Rank}; // Only non-zero for containers
constexpr unsigned int TotalRank{TensorRank + ContainerRank};
const Index NumElements{output.size()};
assert( NumElements > 0 );
// Get the dimensionality of the tensor
std::vector<std::size_t> TotalDims(TotalRank);
for(auto i = 0; i < TensorRank; i++ ) {
auto dim = output.dimension(i);
TotalDims[i] = static_cast<size_t>(dim);
assert( TotalDims[i] == dim ); // check we didn't lose anything in the conversion
}
for(auto i = 0; i < ContainerRank; i++ )
TotalDims[TensorRank + i] = Traits::Dimension(i);
// If the Tensor isn't in Row-Major order, then we'll need to copy it's data
const bool CopyData{NumElements > 1 && ETensor::Layout != Eigen::StorageOptions::RowMajor};
const Scalar * pWriteBuffer;
std::vector<Scalar> CopyBuffer;
const Index TotalNumElements = NumElements * Traits::count;
if( !CopyData ) {
pWriteBuffer = getFirstScalar( output );
} else {
// Regardless of the Eigen::Tensor storage order, the copy will be Row Major
CopyBuffer.resize( TotalNumElements );
Scalar * pCopy = &CopyBuffer[0];
pWriteBuffer = pCopy;
std::array<Index, TensorRank> MyIndex;
for( auto &idx : MyIndex ) idx = 0;
for( auto n = 0; n < NumElements; n++ ) {
const Container & c = output( MyIndex );
copyScalars( pCopy, c );
// Now increment the index
for( int i = output.NumDimensions - 1; i >= 0 && ++MyIndex[i] == output.dimension(i); i-- )
MyIndex[i] = 0;
}
}
upcast->template writeMultiDim<Scalar>(s, TotalDims, pWriteBuffer, TotalNumElements);
}
template <typename T>
void Writer<T>::scientificFormat(const bool set)
{
scientific_ = set;
}
template <typename T>
bool Writer<T>::isScientific(void)
{
return scientific_;
}
template <typename T>
void Writer<T>::setPrecision(const unsigned int prec)
{
prec_ = prec;
}
template <typename T>
unsigned int Writer<T>::getPrecision(void)
{
return prec_;
}
// Reader template implementation
template <typename T>
Reader<T>::Reader(void)
{
upcast = static_cast<T *>(this);
}
template <typename T>
bool Reader<T>::push(const std::string &s)
{
return upcast->push(s);
}
template <typename T>
void Reader<T>::pop(void)
{
upcast->pop();
}
template <typename T>
template <typename U>
typename std::enable_if<std::is_base_of<Serializable, U>::value, void>::type
Reader<T>::read(const std::string &s, U &output)
{
U::read(*this, s, output);
}
template <typename T>
template <typename U>
typename std::enable_if<!std::is_base_of<Serializable, U>::value
&& !EigenIO::is_tensor<U>::value, void>::type
Reader<T>::read(const std::string &s, U &output)
{
upcast->readDefault(s, output);
}
template <typename T>
template <typename U>
void Reader<T>::read(const std::string &s, iScalar<U> &output)
{
typename TensorToVec<iScalar<U>>::type v;
upcast->readDefault(s, v);
vecToTensor(output, v);
}
template <typename T>
template <typename U, int N>
void Reader<T>::read(const std::string &s, iVector<U, N> &output)
{
typename TensorToVec<iVector<U, N>>::type v;
upcast->readDefault(s, v);
vecToTensor(output, v);
}
template <typename T>
template <typename U, int N>
void Reader<T>::read(const std::string &s, iMatrix<U, N> &output)
{
typename TensorToVec<iMatrix<U, N>>::type v;
upcast->readDefault(s, v);
vecToTensor(output, v);
}
template <typename T>
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor<ETensor>::value, void>::type
Reader<T>::read(const std::string &s, ETensor &output)
{
using Index = typename ETensor::Index;
using Container = typename ETensor::Scalar; // NB: could be same as scalar
using Traits = EigenIO::Traits<ETensor>;
using Scalar = typename Traits::scalar_type; // type of the underlying scalar
constexpr unsigned int TensorRank{ETensor::NumIndices};
constexpr unsigned int ContainerRank{Traits::Rank}; // Only non-zero for containers
constexpr unsigned int TotalRank{TensorRank + ContainerRank};
using ETDims = std::array<Index, TensorRank>; // Dimensions of the tensor
// read the (flat) data and dimensionality
std::vector<std::size_t> dimData;
std::vector<Scalar> buf;
upcast->readMultiDim( s, buf, dimData );
assert(dimData.size() == TotalRank && "EigenIO: Tensor rank mismatch" );
// Make sure that the number of elements read matches dimensions read
std::size_t NumContainers = 1;
for( auto i = 0 ; i < TensorRank ; i++ )
NumContainers *= dimData[i];
// If our scalar object is a Container, make sure it's dimensions match what we read back
std::size_t ElementsPerContainer = 1;
for( auto i = 0 ; i < ContainerRank ; i++ ) {
assert( dimData[TensorRank+i] == Traits::Dimension(i) && "Tensor Container dimensions don't match data" );
ElementsPerContainer *= dimData[TensorRank+i];
}
assert( NumContainers * ElementsPerContainer == buf.size() && "EigenIO: Number of elements != product of dimensions" );
// Now see whether the tensor is the right shape, or can be made to be
const auto & dims = output.dimensions();
bool bShapeOK = (output.data() != nullptr);
for( auto i = 0; bShapeOK && i < TensorRank ; i++ )
if( dims[i] != dimData[i] )
bShapeOK = false;
// Make the tensor the same size as the data read
ETDims MyIndex;
if( !bShapeOK ) {
for( auto i = 0 ; i < TensorRank ; i++ )
MyIndex[i] = dimData[i];
Reshape(output, MyIndex);
}
// Copy the data into the tensor
for( auto &d : MyIndex ) d = 0;
const Scalar * pSource = &buf[0];
for( std::size_t n = 0 ; n < NumContainers ; n++ ) {
Container & c = output( MyIndex );
copyScalars( c, pSource );
// Now increment the index
for( int i = TensorRank - 1; i != -1 && ++MyIndex[i] == dims[i]; i-- )
MyIndex[i] = 0;
}
assert( pSource == &buf[NumContainers * ElementsPerContainer] );
}
template <typename T>
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor_fixed<ETensor>::value, void>::type
Reader<T>::Reshape(ETensor &t, const std::array<typename ETensor::Index, ETensor::NumDimensions> &dims )
{
assert( 0 && "EigenIO: Fixed tensor dimensions can't be changed" );
}
template <typename T>
template <typename ETensor>
typename std::enable_if<EigenIO::is_tensor_variable<ETensor>::value, void>::type
Reader<T>::Reshape(ETensor &t, const std::array<typename ETensor::Index, ETensor::NumDimensions> &dims )
{
//t.reshape( dims );
t.resize( dims );
}
template <typename T>
template <typename U>
void Reader<T>::fromString(U &output, const std::string &s)
{
std::istringstream is(s);
is.exceptions(std::ios::failbit);
try
{
is >> std::boolalpha >> output;
}
catch(std::ios_base::failure &e)
{
std::cerr << "numerical conversion failure on '" << s << "' ";
std::cerr << "(typeid: " << typeid(U).name() << ")" << std::endl;
abort();
}
}
// serializable base class ///////////////////////////////////////////////////
class Serializable
{
public:
template <typename T>
static inline void write(Writer<T> &WR,const std::string &s,
const Serializable &obj)
{}
template <typename T>
static inline void read(Reader<T> &RD,const std::string &s,
Serializable &obj)
{}
friend inline std::ostream & operator<<(std::ostream &os,
const Serializable &obj)
{
return os;
}
template <typename T1, typename T2>
static inline typename std::enable_if<!EigenIO::is_tensor<T1>::value || !EigenIO::is_tensor<T2>::value, bool>::type
CompareMember(const T1 &lhs, const T2 &rhs) {
return lhs == rhs;
}
template <typename T1, typename T2>
static inline typename std::enable_if<EigenIO::is_tensor<T1>::value && EigenIO::is_tensor<T2>::value, bool>::type
CompareMember(const T1 &lhs, const T2 &rhs) {
// First check whether dimensions match (Eigen tensor library will assert if they don't match)
bool bReturnValue = (T1::NumIndices == T2::NumIndices);
for( auto i = 0 ; bReturnValue && i < T1::NumIndices ; i++ )
bReturnValue = ( lhs.dimension(i) == rhs.dimension(i) );
if( bReturnValue ) {
Eigen::Tensor<bool, 0, T1::Options> bResult = (lhs == rhs).all();
bReturnValue = bResult(0);
}
return bReturnValue;
}
template <typename T>
static inline typename std::enable_if<EigenIO::is_tensor<T>::value, bool>::type
CompareMember(const std::vector<T> &lhs, const std::vector<T> &rhs) {
const auto NumElements = lhs.size();
bool bResult = ( NumElements == rhs.size() );
for( auto i = 0 ; i < NumElements && bResult ; i++ )
bResult = CompareMember(lhs[i], rhs[i]);
return bResult;
}
template <typename T>
static inline typename std::enable_if<!EigenIO::is_tensor<T>::value, void>::type
WriteMember(std::ostream &os, const T &object) {
os << object;
}
template <typename T>
static inline typename std::enable_if<EigenIO::is_tensor<T>::value, void>::type
WriteMember(std::ostream &os, const T &object) {
using Index = typename T::Index;
const Index NumElements{object.size()};
assert( NumElements > 0 );
Index count = 1;
os << "T<";
for( int i = 0; i < T::NumIndices; i++ ) {
Index dim = object.dimension(i);
count *= dim;
if( i )
os << ",";
os << dim;
}
assert( count == NumElements && "Number of elements doesn't match tensor dimensions" );
os << ">{";
const typename T::Scalar * p = object.data();
for( Index i = 0; i < count; i++ ) {
if( i )
os << ",";
os << *p++;
}
os << "}";
}
};
// Generic writer interface //////////////////////////////////////////////////
template <typename T>
inline void push(Writer<T> &w, const std::string &s) {
w.push(s);
}
template <typename T>
inline void push(Writer<T> &w, const char *s)
{
w.push(std::string(s));
}
template <typename T>
inline void pop(Writer<T> &w)
{
w.pop();
}
template <typename T, typename U>
inline void write(Writer<T> &w, const std::string& s, const U &output)
{
w.write(s, output);
}
// Generic reader interface //////////////////////////////////////////////////
template <typename T>
inline bool push(Reader<T> &r, const std::string &s)
{
return r.push(s);
}
template <typename T>
inline bool push(Reader<T> &r, const char *s)
{
return r.push(std::string(s));
}
template <typename T>
inline void pop(Reader<T> &r)
{
r.pop();
}
template <typename T, typename U>
inline void read(Reader<T> &r, const std::string &s, U &output)
{
r.read(s, output);
}
}
#endif

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@ -1,99 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./lib/util/Sha.h
Copyright (C) 2018
Author: Peter Boyle
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
extern "C" {
#include <openssl/sha.h>
}
#ifdef USE_IPP
#include "ipp.h"
#endif
#pragma once
class GridChecksum
{
public:
static inline uint32_t crc32(const void *data, size_t bytes)
{
return ::crc32(0L,(unsigned char *)data,bytes);
}
#ifdef USE_IPP
static inline uint32_t crc32c(const void* data, size_t bytes)
{
uint32_t crc32c = ~(uint32_t)0;
ippsCRC32C_8u(reinterpret_cast<const unsigned char *>(data), bytes, &crc32c);
ippsSwapBytes_32u_I(&crc32c, 1);
return ~crc32c;
}
#endif
template <typename T>
static inline std::string sha256_string(const std::vector<T> &hash)
{
std::stringstream sha;
std::string s;
for(unsigned int i = 0; i < hash.size(); i++)
{
sha << std::hex << static_cast<unsigned int>(hash[i]);
}
s = sha.str();
return s;
}
static inline std::vector<unsigned char> sha256(const void *data,size_t bytes)
{
std::vector<unsigned char> hash(SHA256_DIGEST_LENGTH);
SHA256_CTX sha256;
SHA256_Init (&sha256);
SHA256_Update(&sha256, data,bytes);
SHA256_Final (&hash[0], &sha256);
return hash;
}
static inline std::vector<int> sha256_seeds(const std::string &s)
{
std::vector<int> seeds;
std::vector<unsigned char> uchars = sha256((void *)s.c_str(),s.size());
for(int i=0;i<uchars.size();i++) seeds.push_back(uchars[i]);
return seeds;
}
};
/*
int main(int argc,char **argv)
{
std::string s("The quick brown fox jumps over the lazy dog");
auto csum = GridChecksum::sha256_seeds(s);
std::cout << "SHA256 sum is 0x";
for(int i=0;i<csum.size;i++) {
std::cout << std::hex << csum[i];
}
std::cout << std::endl;
}
*/

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@ -1,6 +0,0 @@
SUBDIRS = .
include Make.inc

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@ -1,198 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./tests/Test_hmc_EODWFRatio.cc
Copyright (C) 2015-2016
Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
Author: Guido Cossu <guido.cossu@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
int main(int argc, char **argv) {
using namespace Grid;
using namespace Grid::QCD;
Grid_init(&argc, &argv);
int threads = GridThread::GetThreads();
// here make a routine to print all the relevant information on the run
std::cout << GridLogMessage << "Grid is setup to use " << threads << " threads" << std::endl;
// Typedefs to simplify notation
typedef WilsonImplR FermionImplPolicy;
typedef MobiusFermionR FermionAction;
typedef typename FermionAction::FermionField FermionField;
typedef Grid::XmlReader Serialiser;
//::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
IntegratorParameters MD;
// typedef GenericHMCRunner<LeapFrog> HMCWrapper;
// MD.name = std::string("Leap Frog");
// typedef GenericHMCRunner<ForceGradient> HMCWrapper;
// MD.name = std::string("Force Gradient");
typedef GenericHMCRunner<MinimumNorm2> HMCWrapper;
MD.name = std::string("MinimumNorm2");
MD.MDsteps = 20;
MD.trajL = 1.0;
HMCparameters HMCparams;
HMCparams.StartTrajectory = 0;
HMCparams.Trajectories = 200;
HMCparams.NoMetropolisUntil= 20;
// "[HotStart, ColdStart, TepidStart, CheckpointStart]\n";
HMCparams.StartingType =std::string("ColdStart");
HMCparams.MD = MD;
HMCWrapper TheHMC(HMCparams);
// Grid from the command line arguments --grid and --mpi
TheHMC.Resources.AddFourDimGrid("gauge"); // use default simd lanes decomposition
CheckpointerParameters CPparams;
CPparams.config_prefix = "ckpoint_EODWF_lat";
CPparams.rng_prefix = "ckpoint_EODWF_rng";
CPparams.saveInterval = 10;
CPparams.format = "IEEE64BIG";
TheHMC.Resources.LoadNerscCheckpointer(CPparams);
RNGModuleParameters RNGpar;
RNGpar.serial_seeds = "1 2 3 4 5";
RNGpar.parallel_seeds = "6 7 8 9 10";
TheHMC.Resources.SetRNGSeeds(RNGpar);
// Construct observables
// here there is too much indirection
typedef PlaquetteMod<HMCWrapper::ImplPolicy> PlaqObs;
TheHMC.Resources.AddObservable<PlaqObs>();
//////////////////////////////////////////////
const int Ls = 16;
Real beta = 2.13;
Real light_mass = 0.01;
Real strange_mass = 0.04;
Real pv_mass = 1.0;
RealD M5 = 1.8;
RealD b = 1.0; // Scale factor two
RealD c = 0.0;
OneFlavourRationalParams OFRp;
OFRp.lo = 1.0e-2;
OFRp.hi = 64;
OFRp.MaxIter = 10000;
OFRp.tolerance= 1.0e-10;
OFRp.degree = 14;
OFRp.precision= 40;
std::vector<Real> hasenbusch({ 0.1 });
auto GridPtr = TheHMC.Resources.GetCartesian();
auto GridRBPtr = TheHMC.Resources.GetRBCartesian();
auto FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtr);
auto FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtr);
IwasakiGaugeActionR GaugeAction(beta);
// temporarily need a gauge field
LatticeGaugeField U(GridPtr);
// These lines are unecessary if BC are all periodic
std::vector<Complex> boundary = {1,1,1,-1};
FermionAction::ImplParams Params(boundary);
double StoppingCondition = 1e-10;
double MaxCGIterations = 30000;
ConjugateGradient<FermionField> CG(StoppingCondition,MaxCGIterations);
////////////////////////////////////
// Collect actions
////////////////////////////////////
ActionLevel<HMCWrapper::Field> Level1(1);
ActionLevel<HMCWrapper::Field> Level2(4);
////////////////////////////////////
// Strange action
////////////////////////////////////
// FermionAction StrangeOp(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_mass,M5,b,c, Params);
// DomainWallEOFAFermionR Strange_Op_L(Umu, *FGrid, *FrbGrid, *UGrid, *UrbGrid, mf, mf, mb, shift_L, pm, M5);
// DomainWallEOFAFermionR Strange_Op_R(Umu, *FGrid, *FrbGrid, *UGrid, *UrbGrid, mb, mf, mb, shift_R, pm, M5);
// ExactOneFlavourRatioPseudoFermionAction EOFA(Strange_Op_L,Strange_Op_R,CG,ofp, false);
FermionAction StrangeOp (U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,strange_mass,M5,b,c, Params);
FermionAction StrangePauliVillarsOp(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,pv_mass, M5,b,c, Params);
// OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermion(StrangePauliVillarsOp,StrangeOp,OFRp);
OneFlavourRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermion(StrangePauliVillarsOp,StrangeOp,OFRp);
// TwoFlavourRationalTesterPseudoFermionAction<FermionImplPolicy> StrangePseudoFermion1F(StrangeOp,OFRp);
// TwoFlavourPseudoFermionAction<FermionImplPolicy> StrangePseudoFermion2F(StrangeOp,CG,CG);
// Level1.push_back(&StrangePseudoFermion2F);
// Level1.push_back(&StrangePseudoFermion);
////////////////////////////////////
// up down action
////////////////////////////////////
std::vector<Real> light_den;
std::vector<Real> light_num;
int n_hasenbusch = hasenbusch.size();
light_den.push_back(light_mass);
for(int h=0;h<n_hasenbusch;h++){
light_den.push_back(hasenbusch[h]);
light_num.push_back(hasenbusch[h]);
}
light_num.push_back(pv_mass);
std::vector<FermionAction *> Numerators;
std::vector<FermionAction *> Denominators;
std::vector<TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy> *> Quotients;
for(int h=0;h<n_hasenbusch+1;h++){
std::cout << GridLogMessage << " 2f quotient Action "<< light_num[h] << " / " << light_den[h]<< std::endl;
Numerators.push_back (new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_num[h],M5,b,c, Params));
Denominators.push_back(new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_den[h],M5,b,c, Params));
Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],CG,CG));
}
for(int h=0;h<n_hasenbusch+1;h++){
Level1.push_back(Quotients[h]);
}
/////////////////////////////////////////////////////////////
// Gauge action
/////////////////////////////////////////////////////////////
Level2.push_back(&GaugeAction);
TheHMC.TheAction.push_back(Level1);
TheHMC.TheAction.push_back(Level2);
std::cout << GridLogMessage << " Action complete "<< std::endl;
/////////////////////////////////////////////////////////////
// HMC parameters are serialisable
std::cout << GridLogMessage << " Running the HMC "<< std::endl;
TheHMC.Run(); // no smearing
Grid_finalize();
} // main

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@ -1,452 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file:
Copyright (C) 2015-2016
Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
Author: Guido Cossu
Author: David Murphy
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
#define MIXED_PRECISION
#endif
namespace Grid{
namespace QCD{
/*
* Need a plan for gauge field update for mixed precision in HMC (2x speed up)
* -- Store the single prec action operator.
* -- Clone the gauge field from the operator function argument.
* -- Build the mixed precision operator dynamically from the passed operator and single prec clone.
*/
template<class FermionOperatorD, class FermionOperatorF, class SchurOperatorD, class SchurOperatorF>
class MixedPrecisionConjugateGradientOperatorFunction : public OperatorFunction<typename FermionOperatorD::FermionField> {
public:
typedef typename FermionOperatorD::FermionField FieldD;
typedef typename FermionOperatorF::FermionField FieldF;
RealD Tolerance;
RealD InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed
Integer MaxInnerIterations;
Integer MaxOuterIterations;
GridBase* SinglePrecGrid4; //Grid for single-precision fields
GridBase* SinglePrecGrid5; //Grid for single-precision fields
RealD OuterLoopNormMult; //Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance
FermionOperatorF &FermOpF;
FermionOperatorD &FermOpD;;
SchurOperatorF &LinOpF;
SchurOperatorD &LinOpD;
Integer TotalInnerIterations; //Number of inner CG iterations
Integer TotalOuterIterations; //Number of restarts
Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step
MixedPrecisionConjugateGradientOperatorFunction(RealD tol,
Integer maxinnerit,
Integer maxouterit,
GridBase* _sp_grid4,
GridBase* _sp_grid5,
FermionOperatorF &_FermOpF,
FermionOperatorD &_FermOpD,
SchurOperatorF &_LinOpF,
SchurOperatorD &_LinOpD):
LinOpF(_LinOpF),
LinOpD(_LinOpD),
FermOpF(_FermOpF),
FermOpD(_FermOpD),
Tolerance(tol),
InnerTolerance(tol),
MaxInnerIterations(maxinnerit),
MaxOuterIterations(maxouterit),
SinglePrecGrid4(_sp_grid4),
SinglePrecGrid5(_sp_grid5),
OuterLoopNormMult(100.)
{
/* Debugging instances of objects; references are stored
std::cout << GridLogMessage << " Mixed precision CG wrapper LinOpF " <<std::hex<< &LinOpF<<std::dec <<std::endl;
std::cout << GridLogMessage << " Mixed precision CG wrapper LinOpD " <<std::hex<< &LinOpD<<std::dec <<std::endl;
std::cout << GridLogMessage << " Mixed precision CG wrapper FermOpF " <<std::hex<< &FermOpF<<std::dec <<std::endl;
std::cout << GridLogMessage << " Mixed precision CG wrapper FermOpD " <<std::hex<< &FermOpD<<std::dec <<std::endl;
*/
};
void operator()(LinearOperatorBase<FieldD> &LinOpU, const FieldD &src, FieldD &psi) {
std::cout << GridLogMessage << " Mixed precision CG wrapper operator() "<<std::endl;
SchurOperatorD * SchurOpU = static_cast<SchurOperatorD *>(&LinOpU);
// std::cout << GridLogMessage << " Mixed precision CG wrapper operator() FermOpU " <<std::hex<< &(SchurOpU->_Mat)<<std::dec <<std::endl;
// std::cout << GridLogMessage << " Mixed precision CG wrapper operator() FermOpD " <<std::hex<< &(LinOpD._Mat) <<std::dec <<std::endl;
// Assumption made in code to extract gauge field
// We could avoid storing LinopD reference alltogether ?
assert(&(SchurOpU->_Mat)==&(LinOpD._Mat));
////////////////////////////////////////////////////////////////////////////////////
// Must snarf a single precision copy of the gauge field in Linop_d argument
////////////////////////////////////////////////////////////////////////////////////
typedef typename FermionOperatorF::GaugeField GaugeFieldF;
typedef typename FermionOperatorF::GaugeLinkField GaugeLinkFieldF;
typedef typename FermionOperatorD::GaugeField GaugeFieldD;
typedef typename FermionOperatorD::GaugeLinkField GaugeLinkFieldD;
GridBase * GridPtrF = SinglePrecGrid4;
GridBase * GridPtrD = FermOpD.Umu._grid;
GaugeFieldF U_f (GridPtrF);
GaugeLinkFieldF Umu_f(GridPtrF);
// std::cout << " Dim gauge field "<<GridPtrF->Nd()<<std::endl; // 4d
// std::cout << " Dim gauge field "<<GridPtrD->Nd()<<std::endl; // 4d
////////////////////////////////////////////////////////////////////////////////////
// Moving this to a Clone method of fermion operator would allow to duplicate the
// physics parameters and decrease gauge field copies
////////////////////////////////////////////////////////////////////////////////////
GaugeLinkFieldD Umu_d(GridPtrD);
for(int mu=0;mu<Nd*2;mu++){
Umu_d = PeekIndex<LorentzIndex>(FermOpD.Umu, mu);
precisionChange(Umu_f,Umu_d);
PokeIndex<LorentzIndex>(FermOpF.Umu, Umu_f, mu);
}
pickCheckerboard(Even,FermOpF.UmuEven,FermOpF.Umu);
pickCheckerboard(Odd ,FermOpF.UmuOdd ,FermOpF.Umu);
////////////////////////////////////////////////////////////////////////////////////
// Could test to make sure that LinOpF and LinOpD agree to single prec?
////////////////////////////////////////////////////////////////////////////////////
/*
GridBase *Fgrid = psi._grid;
FieldD tmp2(Fgrid);
FieldD tmp1(Fgrid);
LinOpU.Op(src,tmp1);
LinOpD.Op(src,tmp2);
std::cout << " Double gauge field "<< norm2(FermOpD.Umu)<<std::endl;
std::cout << " Single gauge field "<< norm2(FermOpF.Umu)<<std::endl;
std::cout << " Test of operators "<<norm2(tmp1)<<std::endl;
std::cout << " Test of operators "<<norm2(tmp2)<<std::endl;
tmp1=tmp1-tmp2;
std::cout << " Test of operators diff "<<norm2(tmp1)<<std::endl;
*/
////////////////////////////////////////////////////////////////////////////////////
// Make a mixed precision conjugate gradient
////////////////////////////////////////////////////////////////////////////////////
MixedPrecisionConjugateGradient<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations,MaxOuterIterations,SinglePrecGrid5,LinOpF,LinOpD);
std::cout << GridLogMessage << "Calling mixed precision Conjugate Gradient" <<std::endl;
MPCG(src,psi);
}
};
}};
int main(int argc, char **argv) {
using namespace Grid;
using namespace Grid::QCD;
Grid_init(&argc, &argv);
int threads = GridThread::GetThreads();
// here make a routine to print all the relevant information on the run
std::cout << GridLogMessage << "Grid is setup to use " << threads << " threads" << std::endl;
// Typedefs to simplify notation
typedef WilsonImplR FermionImplPolicy;
typedef MobiusFermionR FermionAction;
typedef MobiusFermionF FermionActionF;
typedef MobiusEOFAFermionR FermionEOFAAction;
typedef MobiusEOFAFermionF FermionEOFAActionF;
typedef typename FermionAction::FermionField FermionField;
typedef typename FermionActionF::FermionField FermionFieldF;
typedef Grid::XmlReader Serialiser;
//::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
IntegratorParameters MD;
// typedef GenericHMCRunner<LeapFrog> HMCWrapper;
// MD.name = std::string("Leap Frog");
typedef GenericHMCRunner<ForceGradient> HMCWrapper;
MD.name = std::string("Force Gradient");
// typedef GenericHMCRunner<MinimumNorm2> HMCWrapper;
// MD.name = std::string("MinimumNorm2");
MD.MDsteps = 6;
MD.trajL = 1.0;
HMCparameters HMCparams;
HMCparams.StartTrajectory = 590;
HMCparams.Trajectories = 1000;
HMCparams.NoMetropolisUntil= 0;
// "[HotStart, ColdStart, TepidStart, CheckpointStart]\n";
// HMCparams.StartingType =std::string("ColdStart");
HMCparams.StartingType =std::string("CheckpointStart");
HMCparams.MD = MD;
HMCWrapper TheHMC(HMCparams);
// Grid from the command line arguments --grid and --mpi
TheHMC.Resources.AddFourDimGrid("gauge"); // use default simd lanes decomposition
CheckpointerParameters CPparams;
CPparams.config_prefix = "ckpoint_EODWF_lat";
CPparams.rng_prefix = "ckpoint_EODWF_rng";
CPparams.saveInterval = 10;
CPparams.format = "IEEE64BIG";
TheHMC.Resources.LoadNerscCheckpointer(CPparams);
RNGModuleParameters RNGpar;
RNGpar.serial_seeds = "1 2 3 4 5";
RNGpar.parallel_seeds = "6 7 8 9 10";
TheHMC.Resources.SetRNGSeeds(RNGpar);
// Construct observables
// here there is too much indirection
typedef PlaquetteMod<HMCWrapper::ImplPolicy> PlaqObs;
TheHMC.Resources.AddObservable<PlaqObs>();
//////////////////////////////////////////////
const int Ls = 16;
Real beta = 2.13;
Real light_mass = 0.01;
Real strange_mass = 0.04;
Real pv_mass = 1.0;
RealD M5 = 1.8;
RealD b = 1.0;
RealD c = 0.0;
std::vector<Real> hasenbusch({ 0.1, 0.3, 0.6 });
auto GridPtr = TheHMC.Resources.GetCartesian();
auto GridRBPtr = TheHMC.Resources.GetRBCartesian();
auto FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtr);
auto FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtr);
std::vector<int> latt = GridDefaultLatt();
std::vector<int> mpi = GridDefaultMpi();
std::vector<int> simdF = GridDefaultSimd(Nd,vComplexF::Nsimd());
std::vector<int> simdD = GridDefaultSimd(Nd,vComplexD::Nsimd());
auto GridPtrF = SpaceTimeGrid::makeFourDimGrid(latt,simdF,mpi);
auto GridRBPtrF = SpaceTimeGrid::makeFourDimRedBlackGrid(GridPtrF);
auto FGridF = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtrF);
auto FrbGridF = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtrF);
IwasakiGaugeActionR GaugeAction(beta);
// temporarily need a gauge field
LatticeGaugeField U(GridPtr);
LatticeGaugeFieldF UF(GridPtrF);
// These lines are unecessary if BC are all periodic
std::vector<Complex> boundary = {1,1,1,-1};
FermionAction::ImplParams Params(boundary);
FermionActionF::ImplParams ParamsF(boundary);
double ActionStoppingCondition = 1e-10;
double DerivativeStoppingCondition = 1e-6;
double MaxCGIterations = 30000;
////////////////////////////////////
// Collect actions
////////////////////////////////////
ActionLevel<HMCWrapper::Field> Level1(1);
ActionLevel<HMCWrapper::Field> Level2(8);
////////////////////////////////////
// Strange action
////////////////////////////////////
typedef SchurDiagMooeeOperator<FermionActionF,FermionFieldF> LinearOperatorF;
typedef SchurDiagMooeeOperator<FermionAction ,FermionField > LinearOperatorD;
typedef SchurDiagMooeeOperator<FermionEOFAActionF,FermionFieldF> LinearOperatorEOFAF;
typedef SchurDiagMooeeOperator<FermionEOFAAction ,FermionField > LinearOperatorEOFAD;
typedef MixedPrecisionConjugateGradientOperatorFunction<MobiusFermionD,MobiusFermionF,LinearOperatorD,LinearOperatorF> MxPCG;
typedef MixedPrecisionConjugateGradientOperatorFunction<MobiusEOFAFermionD,MobiusEOFAFermionF,LinearOperatorEOFAD,LinearOperatorEOFAF> MxPCG_EOFA;
// DJM: setup for EOFA ratio (Mobius)
OneFlavourRationalParams OFRp;
OFRp.lo = 0.1;
OFRp.hi = 25.0;
OFRp.MaxIter = 10000;
OFRp.tolerance= 1.0e-9;
OFRp.degree = 14;
OFRp.precision= 50;
MobiusEOFAFermionR Strange_Op_L (U , *FGrid , *FrbGrid , *GridPtr , *GridRBPtr , strange_mass, strange_mass, pv_mass, 0.0, -1, M5, b, c);
MobiusEOFAFermionF Strange_Op_LF(UF, *FGridF, *FrbGridF, *GridPtrF, *GridRBPtrF, strange_mass, strange_mass, pv_mass, 0.0, -1, M5, b, c);
MobiusEOFAFermionR Strange_Op_R (U , *FGrid , *FrbGrid , *GridPtr , *GridRBPtr , pv_mass, strange_mass, pv_mass, -1.0, 1, M5, b, c);
MobiusEOFAFermionF Strange_Op_RF(UF, *FGridF, *FrbGridF, *GridPtrF, *GridRBPtrF, pv_mass, strange_mass, pv_mass, -1.0, 1, M5, b, c);
ConjugateGradient<FermionField> ActionCG(ActionStoppingCondition,MaxCGIterations);
ConjugateGradient<FermionField> DerivativeCG(DerivativeStoppingCondition,MaxCGIterations);
#ifdef MIXED_PRECISION
const int MX_inner = 1000;
// Mixed precision EOFA
LinearOperatorEOFAD Strange_LinOp_L (Strange_Op_L);
LinearOperatorEOFAD Strange_LinOp_R (Strange_Op_R);
LinearOperatorEOFAF Strange_LinOp_LF(Strange_Op_LF);
LinearOperatorEOFAF Strange_LinOp_RF(Strange_Op_RF);
MxPCG_EOFA ActionCGL(ActionStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
Strange_Op_LF,Strange_Op_L,
Strange_LinOp_LF,Strange_LinOp_L);
MxPCG_EOFA DerivativeCGL(DerivativeStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
Strange_Op_LF,Strange_Op_L,
Strange_LinOp_LF,Strange_LinOp_L);
MxPCG_EOFA ActionCGR(ActionStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
Strange_Op_RF,Strange_Op_R,
Strange_LinOp_RF,Strange_LinOp_R);
MxPCG_EOFA DerivativeCGR(DerivativeStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
Strange_Op_RF,Strange_Op_R,
Strange_LinOp_RF,Strange_LinOp_R);
ExactOneFlavourRatioPseudoFermionAction<FermionImplPolicy>
EOFA(Strange_Op_L, Strange_Op_R,
ActionCG,
ActionCGL, ActionCGR,
DerivativeCGL, DerivativeCGR,
OFRp, true);
#else
ExactOneFlavourRatioPseudoFermionAction<FermionImplPolicy>
EOFA(Strange_Op_L, Strange_Op_R,
ActionCG,
ActionCG, ActionCG,
DerivativeCG, DerivativeCG,
OFRp, true);
#endif
Level1.push_back(&EOFA);
////////////////////////////////////
// up down action
////////////////////////////////////
std::vector<Real> light_den;
std::vector<Real> light_num;
int n_hasenbusch = hasenbusch.size();
light_den.push_back(light_mass);
for(int h=0;h<n_hasenbusch;h++){
light_den.push_back(hasenbusch[h]);
light_num.push_back(hasenbusch[h]);
}
light_num.push_back(pv_mass);
//////////////////////////////////////////////////////////////
// Forced to replicate the MxPCG and DenominatorsF etc.. because
// there is no convenient way to "Clone" physics params from double op
// into single op for any operator pair.
// Same issue prevents using MxPCG in the Heatbath step
//////////////////////////////////////////////////////////////
std::vector<FermionAction *> Numerators;
std::vector<FermionAction *> Denominators;
std::vector<TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy> *> Quotients;
std::vector<MxPCG *> ActionMPCG;
std::vector<MxPCG *> MPCG;
std::vector<FermionActionF *> DenominatorsF;
std::vector<LinearOperatorD *> LinOpD;
std::vector<LinearOperatorF *> LinOpF;
for(int h=0;h<n_hasenbusch+1;h++){
std::cout << GridLogMessage << " 2f quotient Action "<< light_num[h] << " / " << light_den[h]<< std::endl;
Numerators.push_back (new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_num[h],M5,b,c, Params));
Denominators.push_back(new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_den[h],M5,b,c, Params));
#ifdef MIXED_PRECISION
////////////////////////////////////////////////////////////////////////////
// Mixed precision CG for 2f force
////////////////////////////////////////////////////////////////////////////
DenominatorsF.push_back(new FermionActionF(UF,*FGridF,*FrbGridF,*GridPtrF,*GridRBPtrF,light_den[h],M5,b,c, ParamsF));
LinOpD.push_back(new LinearOperatorD(*Denominators[h]));
LinOpF.push_back(new LinearOperatorF(*DenominatorsF[h]));
MPCG.push_back(new MxPCG(DerivativeStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
*DenominatorsF[h],*Denominators[h],
*LinOpF[h], *LinOpD[h]) );
ActionMPCG.push_back(new MxPCG(ActionStoppingCondition,
MX_inner,
MaxCGIterations,
GridPtrF,
FrbGridF,
*DenominatorsF[h],*Denominators[h],
*LinOpF[h], *LinOpD[h]) );
// Heatbath not mixed yet. As inverts numerators not so important as raised mass.
Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],*MPCG[h],*ActionMPCG[h],ActionCG));
#else
////////////////////////////////////////////////////////////////////////////
// Standard CG for 2f force
////////////////////////////////////////////////////////////////////////////
Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],DerivativeCG,ActionCG));
#endif
}
for(int h=0;h<n_hasenbusch+1;h++){
Level1.push_back(Quotients[h]);
}
/////////////////////////////////////////////////////////////
// Gauge action
/////////////////////////////////////////////////////////////
Level2.push_back(&GaugeAction);
TheHMC.TheAction.push_back(Level1);
TheHMC.TheAction.push_back(Level2);
std::cout << GridLogMessage << " Action complete "<< std::endl;
/////////////////////////////////////////////////////////////
// HMC parameters are serialisable
std::cout << GridLogMessage << " Running the HMC "<< std::endl;
TheHMC.Run(); // no smearing
Grid_finalize();
} // main

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@ -1,198 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: ./tests/Test_hmc_EODWFRatio.cc
Copyright (C) 2015-2016
Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
Author: Guido Cossu <guido.cossu@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution
directory
*************************************************************************************/
/* END LEGAL */
#include <Grid/Grid.h>
int main(int argc, char **argv) {
using namespace Grid;
using namespace Grid::QCD;
Grid_init(&argc, &argv);
int threads = GridThread::GetThreads();
// here make a routine to print all the relevant information on the run
std::cout << GridLogMessage << "Grid is setup to use " << threads << " threads" << std::endl;
// Typedefs to simplify notation
typedef WilsonImplR FermionImplPolicy;
typedef MobiusFermionR FermionAction;
typedef typename FermionAction::FermionField FermionField;
typedef Grid::XmlReader Serialiser;
//::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
IntegratorParameters MD;
// typedef GenericHMCRunner<LeapFrog> HMCWrapper;
// MD.name = std::string("Leap Frog");
// typedef GenericHMCRunner<ForceGradient> HMCWrapper;
// MD.name = std::string("Force Gradient");
typedef GenericHMCRunner<MinimumNorm2> HMCWrapper;
MD.name = std::string("MinimumNorm2");
MD.MDsteps = 20;
MD.trajL = 1.0;
HMCparameters HMCparams;
HMCparams.StartTrajectory = 30;
HMCparams.Trajectories = 200;
HMCparams.NoMetropolisUntil= 0;
// "[HotStart, ColdStart, TepidStart, CheckpointStart]\n";
// HMCparams.StartingType =std::string("ColdStart");
HMCparams.StartingType =std::string("CheckpointStart");
HMCparams.MD = MD;
HMCWrapper TheHMC(HMCparams);
// Grid from the command line arguments --grid and --mpi
TheHMC.Resources.AddFourDimGrid("gauge"); // use default simd lanes decomposition
CheckpointerParameters CPparams;
CPparams.config_prefix = "ckpoint_EODWF_lat";
CPparams.rng_prefix = "ckpoint_EODWF_rng";
CPparams.saveInterval = 10;
CPparams.format = "IEEE64BIG";
TheHMC.Resources.LoadNerscCheckpointer(CPparams);
RNGModuleParameters RNGpar;
RNGpar.serial_seeds = "1 2 3 4 5";
RNGpar.parallel_seeds = "6 7 8 9 10";
TheHMC.Resources.SetRNGSeeds(RNGpar);
// Construct observables
// here there is too much indirection
typedef PlaquetteMod<HMCWrapper::ImplPolicy> PlaqObs;
TheHMC.Resources.AddObservable<PlaqObs>();
//////////////////////////////////////////////
const int Ls = 16;
Real beta = 2.13;
Real light_mass = 0.01;
Real strange_mass = 0.04;
Real pv_mass = 1.0;
RealD M5 = 1.8;
RealD b = 1.0;
RealD c = 0.0;
// FIXME:
// Same in MC and MD
// Need to mix precision too
OneFlavourRationalParams OFRp;
OFRp.lo = 4.0e-3;
OFRp.hi = 30.0;
OFRp.MaxIter = 10000;
OFRp.tolerance= 1.0e-10;
OFRp.degree = 16;
OFRp.precision= 50;
std::vector<Real> hasenbusch({ 0.1 });
auto GridPtr = TheHMC.Resources.GetCartesian();
auto GridRBPtr = TheHMC.Resources.GetRBCartesian();
auto FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtr);
auto FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtr);
IwasakiGaugeActionR GaugeAction(beta);
// temporarily need a gauge field
LatticeGaugeField U(GridPtr);
// These lines are unecessary if BC are all periodic
std::vector<Complex> boundary = {1,1,1,-1};
FermionAction::ImplParams Params(boundary);
double StoppingCondition = 1e-10;
double MaxCGIterations = 30000;
ConjugateGradient<FermionField> CG(StoppingCondition,MaxCGIterations);
////////////////////////////////////
// Collect actions
////////////////////////////////////
ActionLevel<HMCWrapper::Field> Level1(1);
ActionLevel<HMCWrapper::Field> Level2(4);
////////////////////////////////////
// Strange action
////////////////////////////////////
// FermionAction StrangeOp(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_mass,M5,b,c, Params);
// DomainWallEOFAFermionR Strange_Op_L(Umu, *FGrid, *FrbGrid, *UGrid, *UrbGrid, mf, mf, mb, shift_L, pm, M5);
// DomainWallEOFAFermionR Strange_Op_R(Umu, *FGrid, *FrbGrid, *UGrid, *UrbGrid, mb, mf, mb, shift_R, pm, M5);
// ExactOneFlavourRatioPseudoFermionAction EOFA(Strange_Op_L,Strange_Op_R,CG,ofp, false);
FermionAction StrangeOp (U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,strange_mass,M5,b,c, Params);
FermionAction StrangePauliVillarsOp(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,pv_mass, M5,b,c, Params);
OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermion(StrangePauliVillarsOp,StrangeOp,OFRp);
Level1.push_back(&StrangePseudoFermion);
////////////////////////////////////
// up down action
////////////////////////////////////
std::vector<Real> light_den;
std::vector<Real> light_num;
int n_hasenbusch = hasenbusch.size();
light_den.push_back(light_mass);
for(int h=0;h<n_hasenbusch;h++){
light_den.push_back(hasenbusch[h]);
light_num.push_back(hasenbusch[h]);
}
light_num.push_back(pv_mass);
std::vector<FermionAction *> Numerators;
std::vector<FermionAction *> Denominators;
std::vector<TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy> *> Quotients;
for(int h=0;h<n_hasenbusch+1;h++){
std::cout << GridLogMessage << " 2f quotient Action "<< light_num[h] << " / " << light_den[h]<< std::endl;
Numerators.push_back (new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_num[h],M5,b,c, Params));
Denominators.push_back(new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_den[h],M5,b,c, Params));
Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],CG,CG));
}
for(int h=0;h<n_hasenbusch+1;h++){
Level1.push_back(Quotients[h]);
}
/////////////////////////////////////////////////////////////
// Gauge action
/////////////////////////////////////////////////////////////
Level2.push_back(&GaugeAction);
TheHMC.TheAction.push_back(Level1);
TheHMC.TheAction.push_back(Level2);
std::cout << GridLogMessage << " Action complete "<< std::endl;
/////////////////////////////////////////////////////////////
// HMC parameters are serialisable
std::cout << GridLogMessage << " Running the HMC "<< std::endl;
TheHMC.Run(); // no smearing
Grid_finalize();
} // main

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@ -1,109 +0,0 @@
********************************************************************
TODO:
********************************************************************
i) Got mixed precision in 2f and EOFA force and action solves.
But need mixed precision in the heatbath solve. Best for Fermop to have a "clone" method, to
reduce the number of solver and action objects. Needed ideally for the EOFA heatbath.
15% perhaps
Combine with 2x trajectory length?
ii) Rational on EOFA HB -- relax order
-- Test the approx as per David email
Resume / roll.sh
----------------------------------------------------------------
- 16^3 Currently 10 traj per hour
- EOFA use a different derivative solver from action solver
- EOFA fix Davids hack to the SchurRedBlack guessing
*** Reduce precision/tolerance in EOFA with second CG param. (10% speed up)
*** Force gradient - reduced precision solve for the gradient (4/3x speedup)
*** Need a plan for gauge field update for mixed precision in HMC (2x speed up)
-- Store the single prec action operator.
-- Clone the gauge field from the operator function argument.
-- Build the mixed precision operator dynamically from the passed operator and single prec clone.
*** Mixed precision CG into EOFA portion
*** Further reduce precision in forces to 10^-6 ?
*** Overall: a 3x or so is still possible => 500s -> 160s and 20 traj per hour on 16^3.
- Use mixed precision CG in HMC
- SchurRedBlack.h: stop use of operator function; use LinearOperator or similar instead.
- Or make an OperatorFunction for mixed precision as a wrapper
********************************************************************
* Signed off 2+1f HMC with Hasenbush and strange RHMC 16^3 x 32 DWF Ls=16 Plaquette 0.5883 ish
* Signed off 2+1f HMC with Hasenbush and strange EOFA 16^3 x 32 DWF Ls=16 Plaquette 0.5883 ish
* Wilson plaquette cross checked against CPS and literature GwilsonFnone
********************************************************************
********************************************************************
* RHMC: Timesteps & eigenranges matched from previous CPS 16^3 x 32 runs:
********************************************************************
****
Strange (m=0.04) has eigenspan
****
16^3 done as 1+1+1 with separate PV's.
/dirac1/archive/QCDOC/host/QCDDWF/DWF/2+1f/16nt32/IWASAKI/b2.13/ls16/M1_8/ms0.04/mu0.01/rhmc_multitimescale/evol5/work
****
2+1f 16^3 - [ 4e^-4, 2.42 ] for strange
****
24^3 done as 1+1+1 at strange, and single quotient https://arxiv.org/pdf/0804.0473.pdf Eq 83,
****
double lambda_low = 4.0000000000000002e-04 <- strange
double lambda_low = 1.0000000000000000e-02 <- pauli villars
And high = 2.5
Array bsn_mass[3] = {
double bsn_mass[0] = 1.0000000000000000e+00
double bsn_mass[1] = 1.0000000000000000e+00
double bsn_mass[2] = 1.0000000000000000e+00
}
Array frm_mass[3] = {
double frm_mass[0] = 4.0000000000000001e-02
double frm_mass[1] = 4.0000000000000001e-02
double frm_mass[2] = 4.0000000000000001e-02
}
***
32^3
/dirac1/archive/QCDOC/host/QCDDWF/DWF/2+1f/32nt64/IWASAKI/b2.25/ls16/M1_8/ms0.03/mu0.004/evol6/work
***
Similar det scheme
double lambda_low = 4.0000000000000002e-04
double lambda_low = 1.0000000000000000e-02
Array bsn_mass[3] = {
double bsn_mass[0] = 1.0000000000000000e+00
double bsn_mass[1] = 1.0000000000000000e+00
double bsn_mass[2] = 1.0000000000000000e+00
}
Array frm_mass[3] = {
double frm_mass[0] = 3.0000000000000002e-02
double frm_mass[1] = 3.0000000000000002e-02
double frm_mass[2] = 3.0000000000000002e-02
}
********************************************************************
* Grid: Power method bounds check
********************************************************************
- Finding largest eigenvalue approx 25 not 2.5
- Conventions:
Grid MpcDagMpc based on:
(Moo-Moe Mee^-1 Meo)^dag(Moo-Moe Mee^-1 Meo)
- with Moo = 5-M5 = 3.2
- CPS use(d) Moo = 1
- Eigenrange in Grid is 3.2^2 rescaled so factor of 10 accounted for

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@ -1,746 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/A2AMatrix.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef A2A_Matrix_hpp_
#define A2A_Matrix_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/TimerArray.hpp>
#include <Grid/Eigen/unsupported/CXX11/Tensor>
#ifdef USE_MKL
#include "mkl.h"
#include "mkl_cblas.h"
#endif
#ifndef HADRONS_A2AM_NAME
#define HADRONS_A2AM_NAME "a2aMatrix"
#endif
#ifndef HADRONS_A2AM_IO_TYPE
#define HADRONS_A2AM_IO_TYPE ComplexF
#endif
#define HADRONS_A2AM_PARALLEL_IO
BEGIN_HADRONS_NAMESPACE
// general A2A matrix set based on Eigen tensors and Grid-allocated memory
// Dimensions:
// 0 - ext - external field (momentum, EM field, ...)
// 1 - str - spin-color structure
// 2 - t - timeslice
// 3 - i - left A2A mode index
// 4 - j - right A2A mode index
template <typename T>
using A2AMatrixSet = Eigen::TensorMap<Eigen::Tensor<T, 5, Eigen::RowMajor>>;
template <typename T>
using A2AMatrix = Eigen::Matrix<T, -1, -1, Eigen::RowMajor>;
template <typename T>
using A2AMatrixTr = Eigen::Matrix<T, -1, -1, Eigen::ColMajor>;
/******************************************************************************
* Abstract class for A2A kernels *
******************************************************************************/
template <typename T, typename Field>
class A2AKernel
{
public:
A2AKernel(void) = default;
virtual ~A2AKernel(void) = default;
virtual void operator()(A2AMatrixSet<T> &m, const Field *left, const Field *right,
const unsigned int orthogDim, double &time) = 0;
virtual double flops(const unsigned int blockSizei, const unsigned int blockSizej) = 0;
virtual double bytes(const unsigned int blockSizei, const unsigned int blockSizej) = 0;
};
/******************************************************************************
* Class to handle A2A matrix block HDF5 I/O *
******************************************************************************/
template <typename T>
class A2AMatrixIo
{
public:
// constructors
A2AMatrixIo(void) = default;
A2AMatrixIo(std::string filename, std::string dataname,
const unsigned int nt, const unsigned int ni = 0,
const unsigned int nj = 0);
// destructor
~A2AMatrixIo(void) = default;
// access
unsigned int getNi(void) const;
unsigned int getNj(void) const;
unsigned int getNt(void) const;
size_t getSize(void) const;
// file allocation
template <typename MetadataType>
void initFile(const MetadataType &d, const unsigned int chunkSize);
// block I/O
void saveBlock(const T *data, const unsigned int i, const unsigned int j,
const unsigned int blockSizei, const unsigned int blockSizej);
void saveBlock(const A2AMatrixSet<T> &m, const unsigned int ext, const unsigned int str,
const unsigned int i, const unsigned int j);
template <template <class> class Vec, typename VecT>
void load(Vec<VecT> &v, double *tRead = nullptr);
private:
std::string filename_{""}, dataname_{""};
unsigned int nt_{0}, ni_{0}, nj_{0};
};
/******************************************************************************
* Wrapper for A2A matrix block computation *
******************************************************************************/
template <typename T, typename Field, typename MetadataType, typename TIo = T>
class A2AMatrixBlockComputation
{
private:
struct IoHelper
{
A2AMatrixIo<TIo> io;
MetadataType md;
unsigned int e, s, i, j;
};
typedef std::function<std::string(const unsigned int, const unsigned int)> FilenameFn;
typedef std::function<MetadataType(const unsigned int, const unsigned int)> MetadataFn;
public:
// constructor
A2AMatrixBlockComputation(GridBase *grid,
const unsigned int orthogDim,
const unsigned int next,
const unsigned int nstr,
const unsigned int blockSize,
const unsigned int cacheBlockSize,
TimerArray *tArray = nullptr);
// execution
void execute(const std::vector<Field> &left,
const std::vector<Field> &right,
A2AKernel<T, Field> &kernel,
const FilenameFn &ionameFn,
const FilenameFn &filenameFn,
const MetadataFn &metadataFn);
private:
// I/O handler
void saveBlock(const A2AMatrixSet<TIo> &m, IoHelper &h);
private:
TimerArray *tArray_;
GridBase *grid_;
unsigned int orthogDim_, nt_, next_, nstr_, blockSize_, cacheBlockSize_;
Vector<T> mCache_;
Vector<TIo> mBuf_;
std::vector<IoHelper> nodeIo_;
};
/******************************************************************************
* A2A matrix contraction kernels *
******************************************************************************/
class A2AContraction
{
public:
// accTrMul(acc, a, b): acc += tr(a*b)
template <typename C, typename MatLeft, typename MatRight>
static inline void accTrMul(C &acc, const MatLeft &a, const MatRight &b)
{
if ((MatLeft::Options == Eigen::RowMajor) and
(MatRight::Options == Eigen::ColMajor))
{
parallel_for (unsigned int r = 0; r < a.rows(); ++r)
{
C tmp;
#ifdef USE_MKL
dotuRow(tmp, r, a, b);
#else
tmp = a.row(r).conjugate().dot(b.col(r));
#endif
parallel_critical
{
acc += tmp;
}
}
}
else
{
parallel_for (unsigned int c = 0; c < a.cols(); ++c)
{
C tmp;
#ifdef USE_MKL
dotuCol(tmp, c, a, b);
#else
tmp = a.col(c).conjugate().dot(b.row(c));
#endif
parallel_critical
{
acc += tmp;
}
}
}
}
template <typename MatLeft, typename MatRight>
static inline double accTrMulFlops(const MatLeft &a, const MatRight &b)
{
double n = a.rows()*a.cols();
return 8.*n;
}
// mul(res, a, b): res = a*b
#ifdef USE_MKL
template <template <class, int...> class Mat, int... Opts>
static inline void mul(Mat<ComplexD, Opts...> &res,
const Mat<ComplexD, Opts...> &a,
const Mat<ComplexD, Opts...> &b)
{
static const ComplexD one(1., 0.), zero(0., 0.);
if ((res.rows() != a.rows()) or (res.cols() != b.cols()))
{
res.resize(a.rows(), b.cols());
}
if (Mat<ComplexD, Opts...>::Options == Eigen::RowMajor)
{
cblas_zgemm(CblasRowMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
a.cols(), &one, a.data(), a.cols(), b.data(), b.cols(), &zero,
res.data(), res.cols());
}
else if (Mat<ComplexD, Opts...>::Options == Eigen::ColMajor)
{
cblas_zgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
a.cols(), &one, a.data(), a.rows(), b.data(), b.rows(), &zero,
res.data(), res.rows());
}
}
template <template <class, int...> class Mat, int... Opts>
static inline void mul(Mat<ComplexF, Opts...> &res,
const Mat<ComplexF, Opts...> &a,
const Mat<ComplexF, Opts...> &b)
{
static const ComplexF one(1., 0.), zero(0., 0.);
if ((res.rows() != a.rows()) or (res.cols() != b.cols()))
{
res.resize(a.rows(), b.cols());
}
if (Mat<ComplexF, Opts...>::Options == Eigen::RowMajor)
{
cblas_cgemm(CblasRowMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
a.cols(), &one, a.data(), a.cols(), b.data(), b.cols(), &zero,
res.data(), res.cols());
}
else if (Mat<ComplexF, Opts...>::Options == Eigen::ColMajor)
{
cblas_cgemm(CblasColMajor, CblasNoTrans, CblasNoTrans, a.rows(), b.cols(),
a.cols(), &one, a.data(), a.rows(), b.data(), b.rows(), &zero,
res.data(), res.rows());
}
}
#else
template <typename Mat>
static inline void mul(Mat &res, const Mat &a, const Mat &b)
{
res = a*b;
}
#endif
template <typename Mat>
static inline double mulFlops(const Mat &a, const Mat &b)
{
double nr = a.rows(), nc = a.cols();
return nr*nr*(6.*nc + 2.*(nc - 1.));
}
private:
template <typename C, typename MatLeft, typename MatRight>
static inline void makeDotRowPt(C * &aPt, unsigned int &aInc, C * &bPt,
unsigned int &bInc, const unsigned int aRow,
const MatLeft &a, const MatRight &b)
{
if (MatLeft::Options == Eigen::RowMajor)
{
aPt = a.data() + aRow*a.cols();
aInc = 1;
}
else if (MatLeft::Options == Eigen::ColMajor)
{
aPt = a.data() + aRow;
aInc = a.rows();
}
if (MatRight::Options == Eigen::RowMajor)
{
bPt = b.data() + aRow;
bInc = b.cols();
}
else if (MatRight::Options == Eigen::ColMajor)
{
bPt = b.data() + aRow*b.rows();
bInc = 1;
}
}
#ifdef USE_MKL
template <typename C, typename MatLeft, typename MatRight>
static inline void makeDotColPt(C * &aPt, unsigned int &aInc, C * &bPt,
unsigned int &bInc, const unsigned int aCol,
const MatLeft &a, const MatRight &b)
{
if (MatLeft::Options == Eigen::RowMajor)
{
aPt = a.data() + aCol;
aInc = a.cols();
}
else if (MatLeft::Options == Eigen::ColMajor)
{
aPt = a.data() + aCol*a.rows();
aInc = 1;
}
if (MatRight::Options == Eigen::RowMajor)
{
bPt = b.data() + aCol*b.cols();
bInc = 1;
}
else if (MatRight::Options == Eigen::ColMajor)
{
bPt = b.data() + aCol;
bInc = b.rows();
}
}
template <typename MatLeft, typename MatRight>
static inline void dotuRow(ComplexF &res, const unsigned int aRow,
const MatLeft &a, const MatRight &b)
{
const ComplexF *aPt, *bPt;
unsigned int aInc, bInc;
makeDotRowPt(aPt, aInc, bPt, bInc, aRow, a, b);
cblas_cdotu_sub(a.cols(), aPt, aInc, bPt, bInc, &res);
}
template <typename MatLeft, typename MatRight>
static inline void dotuCol(ComplexF &res, const unsigned int aCol,
const MatLeft &a, const MatRight &b)
{
const ComplexF *aPt, *bPt;
unsigned int aInc, bInc;
makeDotColPt(aPt, aInc, bPt, bInc, aCol, a, b);
cblas_cdotu_sub(a.rows(), aPt, aInc, bPt, bInc, &res);
}
template <typename MatLeft, typename MatRight>
static inline void dotuRow(ComplexD &res, const unsigned int aRow,
const MatLeft &a, const MatRight &b)
{
const ComplexD *aPt, *bPt;
unsigned int aInc, bInc;
makeDotRowPt(aPt, aInc, bPt, bInc, aRow, a, b);
cblas_zdotu_sub(a.cols(), aPt, aInc, bPt, bInc, &res);
}
template <typename MatLeft, typename MatRight>
static inline void dotuCol(ComplexD &res, const unsigned int aCol,
const MatLeft &a, const MatRight &b)
{
const ComplexD *aPt, *bPt;
unsigned int aInc, bInc;
makeDotColPt(aPt, aInc, bPt, bInc, aCol, a, b);
cblas_zdotu_sub(a.rows(), aPt, aInc, bPt, bInc, &res);
}
#endif
};
/******************************************************************************
* A2AMatrixIo template implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename T>
A2AMatrixIo<T>::A2AMatrixIo(std::string filename, std::string dataname,
const unsigned int nt, const unsigned int ni,
const unsigned int nj)
: filename_(filename), dataname_(dataname)
, nt_(nt), ni_(ni), nj_(nj)
{}
// access //////////////////////////////////////////////////////////////////////
template <typename T>
unsigned int A2AMatrixIo<T>::getNt(void) const
{
return nt_;
}
template <typename T>
unsigned int A2AMatrixIo<T>::getNi(void) const
{
return ni_;
}
template <typename T>
unsigned int A2AMatrixIo<T>::getNj(void) const
{
return nj_;
}
template <typename T>
size_t A2AMatrixIo<T>::getSize(void) const
{
return nt_*ni_*nj_*sizeof(T);
}
// file allocation /////////////////////////////////////////////////////////////
template <typename T>
template <typename MetadataType>
void A2AMatrixIo<T>::initFile(const MetadataType &d, const unsigned int chunkSize)
{
#ifdef HAVE_HDF5
std::vector<hsize_t> dim = {static_cast<hsize_t>(nt_),
static_cast<hsize_t>(ni_),
static_cast<hsize_t>(nj_)},
chunk = {static_cast<hsize_t>(nt_),
static_cast<hsize_t>(chunkSize),
static_cast<hsize_t>(chunkSize)};
H5NS::DataSpace dataspace(dim.size(), dim.data());
H5NS::DataSet dataset;
H5NS::DSetCreatPropList plist;
// create empty file just with metadata
{
Hdf5Writer writer(filename_);
write(writer, dataname_, d);
}
// create the dataset
Hdf5Reader reader(filename_, false);
push(reader, dataname_);
auto &group = reader.getGroup();
plist.setChunk(chunk.size(), chunk.data());
plist.setFletcher32();
dataset = group.createDataSet(HADRONS_A2AM_NAME, Hdf5Type<T>::type(), dataspace, plist);
#else
HADRONS_ERROR(Implementation, "all-to-all matrix I/O needs HDF5 library");
#endif
}
// block I/O ///////////////////////////////////////////////////////////////////
template <typename T>
void A2AMatrixIo<T>::saveBlock(const T *data,
const unsigned int i,
const unsigned int j,
const unsigned int blockSizei,
const unsigned int blockSizej)
{
#ifdef HAVE_HDF5
Hdf5Reader reader(filename_, false);
std::vector<hsize_t> count = {nt_, blockSizei, blockSizej},
offset = {0, static_cast<hsize_t>(i),
static_cast<hsize_t>(j)},
stride = {1, 1, 1},
block = {1, 1, 1};
H5NS::DataSpace memspace(count.size(), count.data()), dataspace;
H5NS::DataSet dataset;
size_t shift;
push(reader, dataname_);
auto &group = reader.getGroup();
dataset = group.openDataSet(HADRONS_A2AM_NAME);
dataspace = dataset.getSpace();
dataspace.selectHyperslab(H5S_SELECT_SET, count.data(), offset.data(),
stride.data(), block.data());
dataset.write(data, Hdf5Type<T>::type(), memspace, dataspace);
#else
HADRONS_ERROR(Implementation, "all-to-all matrix I/O needs HDF5 library");
#endif
}
template <typename T>
void A2AMatrixIo<T>::saveBlock(const A2AMatrixSet<T> &m,
const unsigned int ext, const unsigned int str,
const unsigned int i, const unsigned int j)
{
unsigned int blockSizei = m.dimension(3);
unsigned int blockSizej = m.dimension(4);
unsigned int nstr = m.dimension(1);
size_t offset = (ext*nstr + str)*nt_*blockSizei*blockSizej;
saveBlock(m.data() + offset, i, j, blockSizei, blockSizej);
}
template <typename T>
template <template <class> class Vec, typename VecT>
void A2AMatrixIo<T>::load(Vec<VecT> &v, double *tRead)
{
#ifdef HAVE_HDF5
Hdf5Reader reader(filename_);
std::vector<hsize_t> hdim;
H5NS::DataSet dataset;
H5NS::DataSpace dataspace;
H5NS::CompType datatype;
push(reader, dataname_);
auto &group = reader.getGroup();
dataset = group.openDataSet(HADRONS_A2AM_NAME);
datatype = dataset.getCompType();
dataspace = dataset.getSpace();
hdim.resize(dataspace.getSimpleExtentNdims());
dataspace.getSimpleExtentDims(hdim.data());
if ((nt_*ni_*nj_ != 0) and
((hdim[0] != nt_) or (hdim[1] != ni_) or (hdim[2] != nj_)))
{
HADRONS_ERROR(Size, "all-to-all matrix size mismatch (got "
+ std::to_string(hdim[0]) + "x" + std::to_string(hdim[1]) + "x"
+ std::to_string(hdim[2]) + ", expected "
+ std::to_string(nt_) + "x" + std::to_string(ni_) + "x"
+ std::to_string(nj_));
}
else if (ni_*nj_ == 0)
{
if (hdim[0] != nt_)
{
HADRONS_ERROR(Size, "all-to-all time size mismatch (got "
+ std::to_string(hdim[0]) + ", expected "
+ std::to_string(nt_) + ")");
}
ni_ = hdim[1];
nj_ = hdim[2];
}
A2AMatrix<T> buf(ni_, nj_);
std::vector<hsize_t> count = {1, static_cast<hsize_t>(ni_),
static_cast<hsize_t>(nj_)},
stride = {1, 1, 1},
block = {1, 1, 1},
memCount = {static_cast<hsize_t>(ni_),
static_cast<hsize_t>(nj_)};
H5NS::DataSpace memspace(memCount.size(), memCount.data());
std::cout << "Loading timeslice";
std::cout.flush();
*tRead = 0.;
for (unsigned int tp1 = nt_; tp1 > 0; --tp1)
{
unsigned int t = tp1 - 1;
std::vector<hsize_t> offset = {static_cast<hsize_t>(t), 0, 0};
if (t % 10 == 0)
{
std::cout << " " << t;
std::cout.flush();
}
dataspace.selectHyperslab(H5S_SELECT_SET, count.data(), offset.data(),
stride.data(), block.data());
if (tRead) *tRead -= usecond();
dataset.read(buf.data(), datatype, memspace, dataspace);
if (tRead) *tRead += usecond();
v[t] = buf.template cast<VecT>();
}
std::cout << std::endl;
#else
HADRONS_ERROR(Implementation, "all-to-all matrix I/O needs HDF5 library");
#endif
}
/******************************************************************************
* A2AMatrixBlockComputation template implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename T, typename Field, typename MetadataType, typename TIo>
A2AMatrixBlockComputation<T, Field, MetadataType, TIo>
::A2AMatrixBlockComputation(GridBase *grid,
const unsigned int orthogDim,
const unsigned int next,
const unsigned int nstr,
const unsigned int blockSize,
const unsigned int cacheBlockSize,
TimerArray *tArray)
: grid_(grid), nt_(grid->GlobalDimensions()[orthogDim]), orthogDim_(orthogDim)
, next_(next), nstr_(nstr), blockSize_(blockSize), cacheBlockSize_(cacheBlockSize)
, tArray_(tArray)
{
mCache_.resize(nt_*next_*nstr_*cacheBlockSize_*cacheBlockSize_);
mBuf_.resize(nt_*next_*nstr_*blockSize_*blockSize_);
}
#define START_TIMER(name) if (tArray_) tArray_->startTimer(name)
#define STOP_TIMER(name) if (tArray_) tArray_->stopTimer(name)
#define GET_TIMER(name) ((tArray_ != nullptr) ? tArray_->getDTimer(name) : 0.)
// execution ///////////////////////////////////////////////////////////////////
template <typename T, typename Field, typename MetadataType, typename TIo>
void A2AMatrixBlockComputation<T, Field, MetadataType, TIo>
::execute(const std::vector<Field> &left, const std::vector<Field> &right,
A2AKernel<T, Field> &kernel, const FilenameFn &ionameFn,
const FilenameFn &filenameFn, const MetadataFn &metadataFn)
{
//////////////////////////////////////////////////////////////////////////
// i,j is first loop over blockSize_ factors
// ii,jj is second loop over cacheBlockSize_ factors for high perf contractions
// iii,jjj are loops within cacheBlock
// Total index is sum of these i+ii+iii etc...
//////////////////////////////////////////////////////////////////////////
int N_i = left.size();
int N_j = right.size();
double flops, bytes, t_kernel;
double nodes = grid_->NodeCount();
int NBlock_i = N_i/blockSize_ + (((N_i % blockSize_) != 0) ? 1 : 0);
int NBlock_j = N_j/blockSize_ + (((N_j % blockSize_) != 0) ? 1 : 0);
for(int i=0;i<N_i;i+=blockSize_)
for(int j=0;j<N_j;j+=blockSize_)
{
// Get the W and V vectors for this block^2 set of terms
int N_ii = MIN(N_i-i,blockSize_);
int N_jj = MIN(N_j-j,blockSize_);
A2AMatrixSet<TIo> mBlock(mBuf_.data(), next_, nstr_, nt_, N_ii, N_jj);
LOG(Message) << "All-to-all matrix block "
<< j/blockSize_ + NBlock_j*i/blockSize_ + 1
<< "/" << NBlock_i*NBlock_j << " [" << i <<" .. "
<< i+N_ii-1 << ", " << j <<" .. " << j+N_jj-1 << "]"
<< std::endl;
// Series of cache blocked chunks of the contractions within this block
flops = 0.0;
bytes = 0.0;
t_kernel = 0.0;
for(int ii=0;ii<N_ii;ii+=cacheBlockSize_)
for(int jj=0;jj<N_jj;jj+=cacheBlockSize_)
{
double t;
int N_iii = MIN(N_ii-ii,cacheBlockSize_);
int N_jjj = MIN(N_jj-jj,cacheBlockSize_);
A2AMatrixSet<T> mCacheBlock(mCache_.data(), next_, nstr_, nt_, N_iii, N_jjj);
START_TIMER("kernel");
kernel(mCacheBlock, &left[i+ii], &right[j+jj], orthogDim_, t);
STOP_TIMER("kernel");
t_kernel += t;
flops += kernel.flops(N_iii, N_jjj);
bytes += kernel.bytes(N_iii, N_jjj);
START_TIMER("cache copy");
parallel_for_nest5(int e =0;e<next_;e++)
for(int s =0;s< nstr_;s++)
for(int t =0;t< nt_;t++)
for(int iii=0;iii< N_iii;iii++)
for(int jjj=0;jjj< N_jjj;jjj++)
{
mBlock(e,s,t,ii+iii,jj+jjj) = mCacheBlock(e,s,t,iii,jjj);
}
STOP_TIMER("cache copy");
}
// perf
LOG(Message) << "Kernel perf " << flops/t_kernel/1.0e3/nodes
<< " Gflop/s/node " << std::endl;
LOG(Message) << "Kernel perf " << bytes/t_kernel*1.0e6/1024/1024/1024/nodes
<< " GB/s/node " << std::endl;
// IO
double blockSize, ioTime;
unsigned int myRank = grid_->ThisRank(), nRank = grid_->RankCount();
LOG(Message) << "Writing block to disk" << std::endl;
ioTime = -GET_TIMER("IO: write block");
START_TIMER("IO: total");
makeFileDir(filenameFn(0, 0), grid_);
#ifdef HADRONS_A2AM_PARALLEL_IO
grid_->Barrier();
// make task list for current node
nodeIo_.clear();
for(int f = myRank; f < next_*nstr_; f += nRank)
{
IoHelper h;
h.i = i;
h.j = j;
h.e = f/nstr_;
h.s = f % nstr_;
h.io = A2AMatrixIo<TIo>(filenameFn(h.e, h.s),
ionameFn(h.e, h.s), nt_, N_i, N_j);
h.md = metadataFn(h.e, h.s);
nodeIo_.push_back(h);
}
// parallel IO
for (auto &h: nodeIo_)
{
saveBlock(mBlock, h);
}
grid_->Barrier();
#else
// serial IO, for testing purposes only
for(int e = 0; e < next_; e++)
for(int s = 0; s < nstr_; s++)
{
IoHelper h;
h.i = i;
h.j = j;
h.e = e;
h.s = s;
h.io = A2AMatrixIo<TIo>(filenameFn(h.e, h.s),
ionameFn(h.e, h.s), nt_, N_i, N_j);
h.md = metadataFn(h.e, h.s);
saveBlock(mfBlock, h);
}
#endif
STOP_TIMER("IO: total");
blockSize = static_cast<double>(next_*nstr_*nt_*N_ii*N_jj*sizeof(TIo));
ioTime += GET_TIMER("IO: write block");
LOG(Message) << "HDF5 IO done " << sizeString(blockSize) << " in "
<< ioTime << " us ("
<< blockSize/ioTime*1.0e6/1024/1024
<< " MB/s)" << std::endl;
}
}
// I/O handler /////////////////////////////////////////////////////////////////
template <typename T, typename Field, typename MetadataType, typename TIo>
void A2AMatrixBlockComputation<T, Field, MetadataType, TIo>
::saveBlock(const A2AMatrixSet<TIo> &m, IoHelper &h)
{
if ((h.i == 0) and (h.j == 0))
{
START_TIMER("IO: file creation");
h.io.initFile(h.md, blockSize_);
STOP_TIMER("IO: file creation");
}
START_TIMER("IO: write block");
h.io.saveBlock(m, h.e, h.s, h.i, h.j);
STOP_TIMER("IO: write block");
}
#undef START_TIMER
#undef STOP_TIMER
#undef GET_TIMER
END_HADRONS_NAMESPACE
#endif // A2A_Matrix_hpp_

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@ -1,342 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/A2AVectors.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: fionnoh <fionnoh@gmail.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef A2A_Vectors_hpp_
#define A2A_Vectors_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Environment.hpp>
#include <Hadrons/Solver.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Class to generate V & W all-to-all vectors *
******************************************************************************/
template <typename FImpl>
class A2AVectorsSchurDiagTwo
{
public:
FERM_TYPE_ALIASES(FImpl,);
SOLVER_TYPE_ALIASES(FImpl,);
public:
A2AVectorsSchurDiagTwo(FMat &action, Solver &solver);
virtual ~A2AVectorsSchurDiagTwo(void) = default;
void makeLowModeV(FermionField &vout,
const FermionField &evec, const Real &eval);
void makeLowModeV5D(FermionField &vout_4d, FermionField &vout_5d,
const FermionField &evec, const Real &eval);
void makeLowModeW(FermionField &wout,
const FermionField &evec, const Real &eval);
void makeLowModeW5D(FermionField &wout_4d, FermionField &wout_5d,
const FermionField &evec, const Real &eval);
void makeHighModeV(FermionField &vout, const FermionField &noise);
void makeHighModeV5D(FermionField &vout_4d, FermionField &vout_5d,
const FermionField &noise_5d);
void makeHighModeW(FermionField &wout, const FermionField &noise);
void makeHighModeW5D(FermionField &vout_5d, FermionField &wout_5d,
const FermionField &noise_5d);
private:
FMat &action_;
Solver &solver_;
GridBase *fGrid_, *frbGrid_, *gGrid_;
bool is5d_;
FermionField src_o_, sol_e_, sol_o_, tmp_, tmp5_;
SchurDiagTwoOperator<FMat, FermionField> op_;
};
/******************************************************************************
* Methods for V & W all-to-all vectors I/O *
******************************************************************************/
class A2AVectorsIo
{
public:
struct Record: Serializable
{
GRID_SERIALIZABLE_CLASS_MEMBERS(Record,
unsigned int, index);
Record(void): index(0) {}
};
public:
template <typename Field>
static void write(const std::string fileStem, std::vector<Field> &vec,
const bool multiFile, const int trajectory = -1);
template <typename Field>
static void read(std::vector<Field> &vec, const std::string fileStem,
const bool multiFile, const int trajectory = -1);
private:
static inline std::string vecFilename(const std::string stem, const int traj,
const bool multiFile)
{
std::string t = (traj < 0) ? "" : ("." + std::to_string(traj));
if (multiFile)
{
return stem + t;
}
else
{
return stem + t + ".bin";
}
}
};
/******************************************************************************
* A2AVectorsSchurDiagTwo template implementation *
******************************************************************************/
template <typename FImpl>
A2AVectorsSchurDiagTwo<FImpl>::A2AVectorsSchurDiagTwo(FMat &action, Solver &solver)
: action_(action)
, solver_(solver)
, fGrid_(action_.FermionGrid())
, frbGrid_(action_.FermionRedBlackGrid())
, gGrid_(action_.GaugeGrid())
, src_o_(frbGrid_)
, sol_e_(frbGrid_)
, sol_o_(frbGrid_)
, tmp_(frbGrid_)
, tmp5_(fGrid_)
, op_(action_)
{}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeLowModeV(FermionField &vout, const FermionField &evec, const Real &eval)
{
src_o_ = evec;
src_o_.checkerboard = Odd;
pickCheckerboard(Even, sol_e_, vout);
pickCheckerboard(Odd, sol_o_, vout);
/////////////////////////////////////////////////////
// v_ie = -(1/eval_i) * MeeInv Meo MooInv evec_i
/////////////////////////////////////////////////////
action_.MooeeInv(src_o_, tmp_);
assert(tmp_.checkerboard == Odd);
action_.Meooe(tmp_, sol_e_);
assert(sol_e_.checkerboard == Even);
action_.MooeeInv(sol_e_, tmp_);
assert(tmp_.checkerboard == Even);
sol_e_ = (-1.0 / eval) * tmp_;
assert(sol_e_.checkerboard == Even);
/////////////////////////////////////////////////////
// v_io = (1/eval_i) * MooInv evec_i
/////////////////////////////////////////////////////
action_.MooeeInv(src_o_, tmp_);
assert(tmp_.checkerboard == Odd);
sol_o_ = (1.0 / eval) * tmp_;
assert(sol_o_.checkerboard == Odd);
setCheckerboard(vout, sol_e_);
assert(sol_e_.checkerboard == Even);
setCheckerboard(vout, sol_o_);
assert(sol_o_.checkerboard == Odd);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeLowModeV5D(FermionField &vout_4d, FermionField &vout_5d, const FermionField &evec, const Real &eval)
{
makeLowModeV(vout_5d, evec, eval);
action_.ExportPhysicalFermionSolution(vout_5d, vout_4d);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeLowModeW(FermionField &wout, const FermionField &evec, const Real &eval)
{
src_o_ = evec;
src_o_.checkerboard = Odd;
pickCheckerboard(Even, sol_e_, wout);
pickCheckerboard(Odd, sol_o_, wout);
/////////////////////////////////////////////////////
// w_ie = - MeeInvDag MoeDag Doo evec_i
/////////////////////////////////////////////////////
op_.Mpc(src_o_, tmp_);
assert(tmp_.checkerboard == Odd);
action_.MeooeDag(tmp_, sol_e_);
assert(sol_e_.checkerboard == Even);
action_.MooeeInvDag(sol_e_, tmp_);
assert(tmp_.checkerboard == Even);
sol_e_ = (-1.0) * tmp_;
/////////////////////////////////////////////////////
// w_io = Doo evec_i
/////////////////////////////////////////////////////
op_.Mpc(src_o_, sol_o_);
assert(sol_o_.checkerboard == Odd);
setCheckerboard(wout, sol_e_);
assert(sol_e_.checkerboard == Even);
setCheckerboard(wout, sol_o_);
assert(sol_o_.checkerboard == Odd);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeLowModeW5D(FermionField &wout_4d,
FermionField &wout_5d,
const FermionField &evec,
const Real &eval)
{
makeLowModeW(tmp5_, evec, eval);
action_.DminusDag(tmp5_, wout_5d);
action_.ExportPhysicalFermionSource(wout_5d, wout_4d);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeHighModeV(FermionField &vout,
const FermionField &noise)
{
solver_(vout, noise);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeHighModeV5D(FermionField &vout_4d,
FermionField &vout_5d,
const FermionField &noise)
{
if (noise._grid->Dimensions() == fGrid_->Dimensions() - 1)
{
action_.ImportPhysicalFermionSource(noise, tmp5_);
}
else
{
tmp5_ = noise;
}
makeHighModeV(vout_5d, tmp5_);
action_.ExportPhysicalFermionSolution(vout_5d, vout_4d);
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeHighModeW(FermionField &wout,
const FermionField &noise)
{
wout = noise;
}
template <typename FImpl>
void A2AVectorsSchurDiagTwo<FImpl>::makeHighModeW5D(FermionField &wout_4d,
FermionField &wout_5d,
const FermionField &noise)
{
if (noise._grid->Dimensions() == fGrid_->Dimensions() - 1)
{
action_.ImportUnphysicalFermion(noise, wout_5d);
wout_4d = noise;
}
else
{
wout_5d = noise;
action_.ExportPhysicalFermionSource(wout_5d, wout_4d);
}
}
/******************************************************************************
* all-to-all vectors I/O template implementation *
******************************************************************************/
template <typename Field>
void A2AVectorsIo::write(const std::string fileStem, std::vector<Field> &vec,
const bool multiFile, const int trajectory)
{
Record record;
GridBase *grid = vec[0]._grid;
ScidacWriter binWriter(grid->IsBoss());
std::string filename = vecFilename(fileStem, trajectory, multiFile);
if (multiFile)
{
std::string fullFilename;
for (unsigned int i = 0; i < vec.size(); ++i)
{
fullFilename = filename + "/elem" + std::to_string(i) + ".bin";
LOG(Message) << "Writing vector " << i << std::endl;
makeFileDir(fullFilename, grid);
binWriter.open(fullFilename);
record.index = i;
binWriter.writeScidacFieldRecord(vec[i], record);
binWriter.close();
}
}
else
{
makeFileDir(filename, grid);
binWriter.open(filename);
for (unsigned int i = 0; i < vec.size(); ++i)
{
LOG(Message) << "Writing vector " << i << std::endl;
record.index = i;
binWriter.writeScidacFieldRecord(vec[i], record);
}
binWriter.close();
}
}
template <typename Field>
void A2AVectorsIo::read(std::vector<Field> &vec, const std::string fileStem,
const bool multiFile, const int trajectory)
{
Record record;
ScidacReader binReader;
std::string filename = vecFilename(fileStem, trajectory, multiFile);
if (multiFile)
{
std::string fullFilename;
for (unsigned int i = 0; i < vec.size(); ++i)
{
fullFilename = filename + "/elem" + std::to_string(i) + ".bin";
LOG(Message) << "Reading vector " << i << std::endl;
binReader.open(fullFilename);
binReader.readScidacFieldRecord(vec[i], record);
binReader.close();
if (record.index != i)
{
HADRONS_ERROR(Io, "vector index mismatch");
}
}
}
else
{
binReader.open(filename);
for (unsigned int i = 0; i < vec.size(); ++i)
{
LOG(Message) << "Reading vector " << i << std::endl;
binReader.readScidacFieldRecord(vec[i], record);
if (record.index != i)
{
HADRONS_ERROR(Io, "vector index mismatch");
}
}
binReader.close();
}
}
END_HADRONS_NAMESPACE
#endif // A2A_Vectors_hpp_

View File

@ -1,564 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/ScalarVP.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: James Harrison <jch1g10@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MScalar/ChargedProp.hpp>
#include <Hadrons/Modules/MScalar/ScalarVP.hpp>
#include <Hadrons/Modules/MScalar/Scalar.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MScalar;
/*
* Scalar QED vacuum polarisation up to O(alpha)
*
* Conserved vector 2-point function diagram notation:
* _______
* / \
* U_nu * * U_mu
* \_______/
*
* ( adj(S(a\hat{nu}|x)) U_mu(x) S(0|x+a\hat{mu}) U_nu(0) )
* = 2 Re( - )
* ( adj(S(a\hat{nu}|x+a\hat{mu})) adj(U_mu(x)) S(0|x) U_nu(0) )
*
*
* _______
* / \
* free = 1 * * 1
* \_______/
*
*
*
* _______
* / \
* S = iA_nu * * iA_mu
* \_______/
*
*
* Delta_1
* ___*___
* / \
* X = 1 * * 1
* \___*___/
* Delta_1
*
* Delta_1 Delta_1
* ___*___ ___*___
* / \ / \
* 1 * * iA_mu + iA_nu * * 1
* \_______/ \_______/
* 4C = _______ _______
* / \ / \
* + 1 * * iA_mu + iA_nu * * 1
* \___*___/ \___*___/
* Delta_1 Delta_1
*
* Delta_1 Delta_1
* _*___*_ _______
* / \ / \
* 2E = 1 * * 1 + 1 * * 1
* \_______/ \_*___*_/
* Delta_1 Delta_1
*
* Delta_2
* ___*___ _______
* / \ / \
* 2T = 1 * * 1 + 1 * * 1
* \_______/ \___*___/
* Delta_2
*
*
* _______
* / \
* srcT = -A_nu^2/2 * * 1
* \_______/
*
*
*
* _______
* / \
* snkT = 1 * * -A_mu^2/2
* \_______/
*
* Full VP to O(alpha) = free + q^2*(S+X+4C+2E+2T+srcT+snkT)
*/
/******************************************************************************
* TScalarVP implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
TScalarVP::TScalarVP(const std::string name)
: Module<ScalarVPPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
std::vector<std::string> TScalarVP::getInput(void)
{
prop0Name_ = par().scalarProp + "_0";
propQName_ = par().scalarProp + "_Q";
propSunName_ = par().scalarProp + "_Sun";
propTadName_ = par().scalarProp + "_Tad";
std::vector<std::string> in = {par().emField, prop0Name_, propQName_,
propSunName_, propTadName_};
return in;
}
std::vector<std::string> TScalarVP::getOutput(void)
{
std::vector<std::string> out;
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
// out.push_back(getName() + "_propQ_" + std::to_string(mu));
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
out.push_back(getName() + "_" + std::to_string(mu)
+ "_" + std::to_string(nu));
}
}
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
void TScalarVP::setup(void)
{
freeMomPropName_ = FREEMOMPROP(static_cast<TChargedProp *>(vm().getModule(par().scalarProp))->par().mass);
GFSrcName_ = par().scalarProp + "_DinvSrc";
fftName_ = par().scalarProp + "_fft";
phaseName_.clear();
muPropQName_.clear();
vpTensorName_.clear();
momPhaseName_.clear();
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
phaseName_.push_back("_shiftphase_" + std::to_string(mu));
muPropQName_.push_back(getName() + "_propQ_" + std::to_string(mu));
std::vector<std::string> vpTensorName_mu;
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
vpTensorName_mu.push_back(getName() + "_" + std::to_string(mu)
+ "_" + std::to_string(nu));
}
vpTensorName_.push_back(vpTensorName_mu);
}
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
momPhaseName_.push_back("_momentumphase_" + std::to_string(i_p));
}
}
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
envCreateLat(ScalarField, muPropQName_[mu]);
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
envCreateLat(ScalarField, vpTensorName_[mu][nu]);
}
}
if (!par().output.empty())
{
momPhasesDone_ = env().hasCreatedObject(momPhaseName_[0]);
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
envCacheLat(ScalarField, momPhaseName_[i_p]);
}
}
envTmpLat(ScalarField, "buf");
envTmpLat(ScalarField, "result");
envTmpLat(ScalarField, "Amu");
envTmpLat(ScalarField, "Usnk");
envTmpLat(ScalarField, "tmpProp");
}
// execution ///////////////////////////////////////////////////////////////////
void TScalarVP::execute(void)
{
// CACHING ANALYTIC EXPRESSIONS
makeCaches();
Complex ci(0.0,1.0);
Real q = static_cast<TChargedProp *>(vm().getModule(par().scalarProp))->par().charge;
auto &prop0 = envGet(ScalarField, prop0Name_);
auto &propQ = envGet(ScalarField, propQName_);
auto &propSun = envGet(ScalarField, propSunName_);
auto &propTad = envGet(ScalarField, propTadName_);
auto &GFSrc = envGet(ScalarField, GFSrcName_);
auto &G = envGet(ScalarField, freeMomPropName_);
auto &fft = envGet(FFT, fftName_);
phase_.clear();
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
auto &phmu = envGet(ScalarField, phaseName_[mu]);
phase_.push_back(&phmu);
}
// PROPAGATORS FROM SHIFTED SOURCES
LOG(Message) << "Computing O(q) charged scalar propagators..."
<< std::endl;
std::vector<ScalarField *> muPropQ;
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
auto &propmu = envGet(ScalarField, muPropQName_[mu]);
// -G*momD1*G*F*tau_mu*Src (momD1 = F*D1*Finv)
propmu = adj(*phase_[mu])*GFSrc;
momD1(propmu, fft);
propmu = -G*propmu;
fft.FFT_all_dim(propmu, propmu, FFT::backward);
muPropQ.push_back(&propmu);
}
// CONTRACTIONS
auto &A = envGet(EmField, par().emField);
envGetTmp(ScalarField, buf);
envGetTmp(ScalarField, result);
envGetTmp(ScalarField, Amu);
envGetTmp(ScalarField, Usnk);
envGetTmp(ScalarField, tmpProp);
TComplex Anu0, Usrc;
std::vector<int> coor0 = {0, 0, 0, 0};
std::vector<std::vector<ScalarField *> > vpTensor;
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
std::vector<ScalarField *> vpTensor_mu;
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
auto &vpmunu = envGet(ScalarField, vpTensorName_[mu][nu]);
vpTensor_mu.push_back(&vpmunu);
}
vpTensor.push_back(vpTensor_mu);
}
// Prepare output data structure if necessary
Result outputData;
if (!par().output.empty())
{
outputData.projection.resize(par().outputMom.size());
outputData.lattice_size = env().getGrid()->_fdimensions;
outputData.mass = static_cast<TChargedProp *>(vm().getModule(par().scalarProp))->par().mass;
outputData.charge = q;
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
outputData.projection[i_p].momentum = strToVec<int>(par().outputMom[i_p]);
outputData.projection[i_p].pi.resize(env().getNd());
outputData.projection[i_p].pi_free.resize(env().getNd());
outputData.projection[i_p].pi_2E.resize(env().getNd());
outputData.projection[i_p].pi_2T.resize(env().getNd());
outputData.projection[i_p].pi_S.resize(env().getNd());
outputData.projection[i_p].pi_4C.resize(env().getNd());
outputData.projection[i_p].pi_X.resize(env().getNd());
outputData.projection[i_p].pi_srcT.resize(env().getNd());
outputData.projection[i_p].pi_snkT.resize(env().getNd());
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
outputData.projection[i_p].pi[nu].resize(env().getNd());
outputData.projection[i_p].pi_free[nu].resize(env().getNd());
outputData.projection[i_p].pi_2E[nu].resize(env().getNd());
outputData.projection[i_p].pi_2T[nu].resize(env().getNd());
outputData.projection[i_p].pi_S[nu].resize(env().getNd());
outputData.projection[i_p].pi_4C[nu].resize(env().getNd());
outputData.projection[i_p].pi_X[nu].resize(env().getNd());
outputData.projection[i_p].pi_srcT[nu].resize(env().getNd());
outputData.projection[i_p].pi_snkT[nu].resize(env().getNd());
}
}
}
// Do contractions
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
peekSite(Anu0, peekLorentz(A, nu), coor0);
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
LOG(Message) << "Computing Pi[" << mu << "][" << nu << "]..."
<< std::endl;
Amu = peekLorentz(A, mu);
// free
tmpProp = Cshift(prop0, nu, -1); // S_0(0|x-a\hat{\nu})
// = S_0(a\hat{\nu}|x)
Usrc = Complex(1.0,0.0);
vpContraction(result, prop0, tmpProp, Usrc, mu);
*vpTensor[mu][nu] = result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_free[mu][nu], result,
i_p);
}
}
tmpProp = result; // Just using tmpProp as a temporary ScalarField
// here (buf is modified by calls to writeVP())
// srcT
result = tmpProp * (-0.5)*Anu0*Anu0;
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_srcT[mu][nu], result,
i_p);
}
}
// snkT
result = tmpProp * (-0.5)*Amu*Amu;
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_snkT[mu][nu], result,
i_p);
}
}
// S
tmpProp = Cshift(prop0, nu, -1); // S_0(a\hat{\nu}|x)
Usrc = ci*Anu0;
Usnk = ci*Amu;
vpContraction(result, prop0, tmpProp, Usrc, Usnk, mu);
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_S[mu][nu], result,
i_p);
}
}
// 4C
tmpProp = Cshift(prop0, nu, -1); // S_0(a\hat{\nu}|x)
Usrc = Complex(1.0,0.0);
Usnk = ci*Amu;
vpContraction(result, propQ, tmpProp, Usrc, Usnk, mu);
Usrc = ci*Anu0;
vpContraction(buf, propQ, tmpProp, Usrc, mu);
result += buf;
vpContraction(buf, prop0, *muPropQ[nu], Usrc, mu);
result += buf;
Usrc = Complex(1.0,0.0);
Usnk = ci*Amu;
vpContraction(buf, prop0, *muPropQ[nu], Usrc, Usnk, mu);
result += buf;
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_4C[mu][nu], result,
i_p);
}
}
// X
Usrc = Complex(1.0,0.0);
vpContraction(result, propQ, *muPropQ[nu], Usrc, mu);
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_X[mu][nu], result,
i_p);
}
}
// 2E
tmpProp = Cshift(prop0, nu, -1); // S_0(a\hat{\nu}|x)
Usrc = Complex(1.0,0.0);
vpContraction(result, propSun, tmpProp, Usrc, mu);
tmpProp = Cshift(propSun, nu, -1); // S_\Sigma(0|x-a\hat{\nu})
//(Note: <S(0|x-a\hat{\nu})> = <S(a\hat{\nu}|x)>)
vpContraction(buf, prop0, tmpProp, Usrc, mu);
result += buf;
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_2E[mu][nu], result,
i_p);
}
}
// 2T
tmpProp = Cshift(prop0, nu, -1); // S_0(a\hat{\nu}|x)
Usrc = Complex(1.0,0.0);
vpContraction(result, propTad, tmpProp, Usrc, mu);
tmpProp = Cshift(propTad, nu, -1); // S_T(0|x-a\hat{\nu})
vpContraction(buf, prop0, tmpProp, Usrc, mu);
result += buf;
*vpTensor[mu][nu] += q*q*result;
// Do momentum projections if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi_2T[mu][nu], result,
i_p);
}
}
// Do momentum projections of full VP if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pi[mu][nu],
*vpTensor[mu][nu], i_p);
}
}
}
}
// OUTPUT IF NECESSARY
if (!par().output.empty())
{
LOG(Message) << "Saving momentum-projected HVP to '"
<< RESULT_FILE_NAME(par().output, vm().getTrajectory()) << "'..."
<< std::endl;
saveResult(par().output, "HVP", outputData);
}
}
void TScalarVP::makeCaches(void)
{
envGetTmp(ScalarField, buf);
if ( (!par().output.empty()) && (!momPhasesDone_) )
{
LOG(Message) << "Caching phases for momentum projections..."
<< std::endl;
std::vector<int> &l = env().getGrid()->_fdimensions;
Complex ci(0.0,1.0);
// Calculate phase factors
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
std::vector<int> mom = strToVec<int>(par().outputMom[i_p]);
auto &momph_ip = envGet(ScalarField, momPhaseName_[i_p]);
momph_ip = zero;
for (unsigned int j = 0; j < env().getNd()-1; ++j)
{
Real twoPiL = M_PI*2./l[j];
LatticeCoordinate(buf, j);
buf = mom[j]*twoPiL*buf;
momph_ip = momph_ip + buf;
}
momph_ip = exp(-ci*momph_ip);
momPhase_.push_back(&momph_ip);
}
}
}
void TScalarVP::vpContraction(ScalarField &vp,
ScalarField &prop_0_x, ScalarField &prop_nu_x,
TComplex u_src, ScalarField &u_snk, int mu)
{
// Note: this function assumes a point source is used.
vp = adj(prop_nu_x) * u_snk * Cshift(prop_0_x, mu, 1) * u_src;
vp -= Cshift(adj(prop_nu_x), mu, 1) * adj(u_snk) * prop_0_x * u_src;
vp = 2.0*real(vp);
}
void TScalarVP::vpContraction(ScalarField &vp,
ScalarField &prop_0_x, ScalarField &prop_nu_x,
TComplex u_src, int mu)
{
// Note: this function assumes a point source is used.
vp = adj(prop_nu_x) * Cshift(prop_0_x, mu, 1) * u_src;
vp -= Cshift(adj(prop_nu_x), mu, 1) * prop_0_x * u_src;
vp = 2.0*real(vp);
}
void TScalarVP::project(std::vector<Complex> &projection, const ScalarField &vp, int i_p)
{
std::vector<TComplex> vecBuf;
envGetTmp(ScalarField, buf);
buf = vp*(*momPhase_[i_p]);
sliceSum(buf, vecBuf, Tp);
projection.resize(vecBuf.size());
for (unsigned int t = 0; t < vecBuf.size(); ++t)
{
projection[t] = TensorRemove(vecBuf[t]);
}
}
void TScalarVP::momD1(ScalarField &s, FFT &fft)
{
auto &A = envGet(EmField, par().emField);
Complex ci(0.0,1.0);
envGetTmp(ScalarField, buf);
envGetTmp(ScalarField, result);
envGetTmp(ScalarField, Amu);
result = zero;
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
Amu = peekLorentz(A, mu);
buf = (*phase_[mu])*s;
fft.FFT_all_dim(buf, buf, FFT::backward);
buf = Amu*buf;
fft.FFT_all_dim(buf, buf, FFT::forward);
result = result - ci*buf;
}
fft.FFT_all_dim(s, s, FFT::backward);
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
Amu = peekLorentz(A, mu);
buf = Amu*s;
fft.FFT_all_dim(buf, buf, FFT::forward);
result = result + ci*adj(*phase_[mu])*buf;
}
s = result;
}

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@ -1,129 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/ScalarVP.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: James Harrison <jch1g10@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MScalar_ScalarVP_hpp_
#define Hadrons_MScalar_ScalarVP_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Scalar vacuum polarisation *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MScalar)
class ScalarVPPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(ScalarVPPar,
std::string, emField,
std::string, scalarProp,
std::string, output,
std::vector<std::string>, outputMom);
};
class TScalarVP: public Module<ScalarVPPar>
{
public:
BASIC_TYPE_ALIASES(SIMPL,);
typedef PhotonR::GaugeField EmField;
typedef PhotonR::GaugeLinkField EmComp;
class Result: Serializable
{
public:
class Projection: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Projection,
std::vector<int>, momentum,
std::vector<std::vector<std::vector<Complex>>>, pi,
std::vector<std::vector<std::vector<Complex>>>, pi_free,
std::vector<std::vector<std::vector<Complex>>>, pi_2E,
std::vector<std::vector<std::vector<Complex>>>, pi_2T,
std::vector<std::vector<std::vector<Complex>>>, pi_S,
std::vector<std::vector<std::vector<Complex>>>, pi_4C,
std::vector<std::vector<std::vector<Complex>>>, pi_X,
std::vector<std::vector<std::vector<Complex>>>, pi_srcT,
std::vector<std::vector<std::vector<Complex>>>, pi_snkT);
};
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<int>, lattice_size,
double, mass,
double, charge,
std::vector<Projection>, projection);
};
public:
// constructor
TScalarVP(const std::string name);
// destructor
virtual ~TScalarVP(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// setup
virtual void setup(void);
// execution
virtual void execute(void);
private:
void makeCaches(void);
// conserved vector two-point contraction
void vpContraction(ScalarField &vp,
ScalarField &prop_0_x, ScalarField &prop_nu_x,
TComplex u_src, ScalarField &u_snk, int mu);
// conserved vector two-point contraction with unit gauge link at sink
void vpContraction(ScalarField &vp,
ScalarField &prop_0_x, ScalarField &prop_nu_x,
TComplex u_src, int mu);
// write momentum-projected vacuum polarisation to file(s)
void project(std::vector<Complex> &projection, const ScalarField &vp,
int i_p);
// momentum-space Delta_1 insertion
void momD1(ScalarField &s, FFT &fft);
private:
bool momPhasesDone_;
std::string freeMomPropName_, GFSrcName_,
prop0Name_, propQName_,
propSunName_, propTadName_,
fftName_;
std::vector<std::string> phaseName_, muPropQName_,
momPhaseName_;
std::vector<std::vector<std::string> > vpTensorName_;
std::vector<ScalarField *> phase_, momPhase_;
};
MODULE_REGISTER(ScalarVP, TScalarVP, MScalar);
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MScalar_ScalarVP_hpp_

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/TestSeqConserved.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MUtilities/TestSeqConserved.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MUtilities;
template class Grid::Hadrons::MUtilities::TTestSeqConserved<FIMPL>;

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/TestSeqGamma.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MUtilities/TestSeqGamma.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MUtilities;
template class Grid::Hadrons::MUtilities::TTestSeqGamma<FIMPL>;

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@ -1,260 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/VPCounterTerms.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: James Harrison <jch1g10@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MScalar/VPCounterTerms.hpp>
#include <Hadrons/Modules/MScalar/Scalar.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MScalar;
/******************************************************************************
* TVPCounterTerms implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
TVPCounterTerms::TVPCounterTerms(const std::string name)
: Module<VPCounterTermsPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
std::vector<std::string> TVPCounterTerms::getInput(void)
{
std::vector<std::string> in = {par().source};
return in;
}
std::vector<std::string> TVPCounterTerms::getOutput(void)
{
std::vector<std::string> out;
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
void TVPCounterTerms::setup(void)
{
freeMomPropName_ = FREEMOMPROP(par().mass);
phaseName_.clear();
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
phaseName_.push_back("_shiftphase_" + std::to_string(mu));
}
GFSrcName_ = getName() + "_DinvSrc";
phatsqName_ = getName() + "_pHatSquared";
prop0Name_ = getName() + "_freeProp";
twoscalarName_ = getName() + "_2scalarProp";
psquaredName_ = getName() + "_psquaredProp";
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
momPhaseName_.push_back("_momentumphase_" + std::to_string(i_p));
}
}
envCreateLat(ScalarField, freeMomPropName_);
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
envCreateLat(ScalarField, phaseName_[mu]);
}
envCreateLat(ScalarField, phatsqName_);
envCreateLat(ScalarField, GFSrcName_);
envCreateLat(ScalarField, prop0Name_);
envCreateLat(ScalarField, twoscalarName_);
envCreateLat(ScalarField, psquaredName_);
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
envCacheLat(ScalarField, momPhaseName_[i_p]);
}
}
envTmpLat(ScalarField, "buf");
envTmpLat(ScalarField, "tmp_vp");
envTmpLat(ScalarField, "vpPhase");
}
// execution ///////////////////////////////////////////////////////////////////
void TVPCounterTerms::execute(void)
{
auto &source = envGet(ScalarField, par().source);
Complex ci(0.0,1.0);
FFT fft(env().getGrid());
envGetTmp(ScalarField, buf);
envGetTmp(ScalarField, tmp_vp);
// Momentum-space free scalar propagator
auto &G = envGet(ScalarField, freeMomPropName_);
SIMPL::MomentumSpacePropagator(G, par().mass);
// Phases and hat{p}^2
auto &phatsq = envGet(ScalarField, phatsqName_);
std::vector<int> &l = env().getGrid()->_fdimensions;
LOG(Message) << "Calculating shift phases..." << std::endl;
phatsq = zero;
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
Real twoPiL = M_PI*2./l[mu];
auto &phmu = envGet(ScalarField, phaseName_[mu]);
LatticeCoordinate(buf, mu);
phmu = exp(ci*twoPiL*buf);
phase_.push_back(&phmu);
buf = 2.*sin(.5*twoPiL*buf);
phatsq = phatsq + buf*buf;
}
// G*F*src
auto &GFSrc = envGet(ScalarField, GFSrcName_);
fft.FFT_all_dim(GFSrc, source, FFT::forward);
GFSrc = G*GFSrc;
// Position-space free scalar propagator
auto &prop0 = envGet(ScalarField, prop0Name_);
prop0 = GFSrc;
fft.FFT_all_dim(prop0, prop0, FFT::backward);
// Propagators for counter-terms
auto &twoscalarProp = envGet(ScalarField, twoscalarName_);
auto &psquaredProp = envGet(ScalarField, psquaredName_);
twoscalarProp = G*GFSrc;
fft.FFT_all_dim(twoscalarProp, twoscalarProp, FFT::backward);
psquaredProp = G*phatsq*GFSrc;
fft.FFT_all_dim(psquaredProp, psquaredProp, FFT::backward);
// Prepare output data structure if necessary
Result outputData;
if (!par().output.empty())
{
outputData.projection.resize(par().outputMom.size());
outputData.lattice_size = env().getGrid()->_fdimensions;
outputData.mass = par().mass;
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
outputData.projection[i_p].momentum = strToVec<int>(par().outputMom[i_p]);
outputData.projection[i_p].twoScalar.resize(env().getNd());
outputData.projection[i_p].threeScalar.resize(env().getNd());
outputData.projection[i_p].pSquaredInsertion.resize(env().getNd());
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
outputData.projection[i_p].twoScalar[nu].resize(env().getNd());
outputData.projection[i_p].threeScalar[nu].resize(env().getNd());
outputData.projection[i_p].pSquaredInsertion[nu].resize(env().getNd());
}
// Calculate phase factors
auto &momph_ip = envGet(ScalarField, momPhaseName_[i_p]);
momph_ip = zero;
for (unsigned int j = 0; j < env().getNd()-1; ++j)
{
Real twoPiL = M_PI*2./l[j];
LatticeCoordinate(buf, j);
buf = outputData.projection[i_p].momentum[j]*twoPiL*buf;
momph_ip = momph_ip + buf;
}
momph_ip = exp(-ci*momph_ip);
momPhase_.push_back(&momph_ip);
}
}
// Contractions
for (unsigned int nu = 0; nu < env().getNd(); ++nu)
{
buf = adj(Cshift(prop0, nu, -1));
for (unsigned int mu = 0; mu < env().getNd(); ++mu)
{
// Two-scalar loop
tmp_vp = buf * Cshift(prop0, mu, 1);
tmp_vp -= Cshift(buf, mu, 1) * prop0;
tmp_vp = 2.0*real(tmp_vp);
// Output if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].twoScalar[mu][nu],
tmp_vp, i_p);
}
}
// Three-scalar loop (no vertex)
tmp_vp = buf * Cshift(twoscalarProp, mu, 1);
tmp_vp -= Cshift(buf, mu, 1) * twoscalarProp;
tmp_vp = 2.0*real(tmp_vp);
// Output if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].threeScalar[mu][nu],
tmp_vp, i_p);
}
}
// Three-scalar loop (hat{p}^2 insertion)
tmp_vp = buf * Cshift(psquaredProp, mu, 1);
tmp_vp -= Cshift(buf, mu, 1) * psquaredProp;
tmp_vp = 2.0*real(tmp_vp);
// Output if necessary
if (!par().output.empty())
{
for (unsigned int i_p = 0; i_p < par().outputMom.size(); ++i_p)
{
project(outputData.projection[i_p].pSquaredInsertion[mu][nu],
tmp_vp, i_p);
}
}
}
}
// OUTPUT IF NECESSARY
if (!par().output.empty())
{
LOG(Message) << "Saving momentum-projected correlators to '"
<< RESULT_FILE_NAME(par().output, vm().getTrajectory()) << "'..."
<< std::endl;
saveResult(par().output, "scalar_loops", outputData);
}
}
void TVPCounterTerms::project(std::vector<Complex> &projection, const ScalarField &vp, int i_p)
{
std::vector<TComplex> vecBuf;
envGetTmp(ScalarField, vpPhase);
vpPhase = vp*(*momPhase_[i_p]);
sliceSum(vpPhase, vecBuf, Tp);
projection.resize(vecBuf.size());
for (unsigned int t = 0; t < vecBuf.size(); ++t)
{
projection[t] = TensorRemove(vecBuf[t]);
}
}

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@ -1,103 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/VPCounterTerms.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: James Harrison <jch1g10@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MScalar_VPCounterTerms_hpp_
#define Hadrons_MScalar_VPCounterTerms_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* VPCounterTerms *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MScalar)
class VPCounterTermsPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(VPCounterTermsPar,
std::string, source,
double, mass,
std::string, output,
std::vector<std::string>, outputMom);
};
class TVPCounterTerms: public Module<VPCounterTermsPar>
{
public:
BASIC_TYPE_ALIASES(SIMPL,);
class Result: Serializable
{
public:
class Projection: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Projection,
std::vector<int>, momentum,
std::vector<std::vector<std::vector<Complex>>>, twoScalar,
std::vector<std::vector<std::vector<Complex>>>, threeScalar,
std::vector<std::vector<std::vector<Complex>>>, pSquaredInsertion);
};
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<int>, lattice_size,
double, mass,
std::vector<Projection>, projection);
};
public:
// constructor
TVPCounterTerms(const std::string name);
// destructor
virtual ~TVPCounterTerms(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// setup
virtual void setup(void);
// execution
virtual void execute(void);
private:
void project(std::vector<Complex> &projection, const ScalarField &vp, int i_p);
private:
std::string freeMomPropName_, GFSrcName_, phatsqName_, prop0Name_,
twoscalarName_, twoscalarVertexName_,
psquaredName_, psquaredVertexName_;
std::vector<std::string> phaseName_, momPhaseName_;
std::vector<ScalarField *> phase_, momPhase_;
};
MODULE_REGISTER(VPCounterTerms, TVPCounterTerms, MScalar);
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MScalar_VPCounterTerms_hpp_

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Archive/Modules/WardIdentity.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/WardIdentity.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TWardIdentity<FIMPL>;

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@ -1,250 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/DilutedNoise.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_DilutedNoise_hpp_
#define Hadrons_DilutedNoise_hpp_
#include <Hadrons/Global.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Abstract container for diluted noise *
******************************************************************************/
template <typename FImpl>
class DilutedNoise
{
public:
typedef typename FImpl::FermionField FermionField;
public:
// constructor/destructor
DilutedNoise(GridCartesian *g);
DilutedNoise(GridCartesian *g, const unsigned int nNoise);
virtual ~DilutedNoise(void) = default;
// access
std::vector<FermionField> & getNoise(void);
const std::vector<FermionField> & getNoise(void) const;
const FermionField & operator[](const unsigned int i) const;
FermionField & operator[](const unsigned int i);
void resize(const unsigned int nNoise);
unsigned int size(void) const;
GridCartesian *getGrid(void) const;
// generate noise (pure virtual)
virtual void generateNoise(GridParallelRNG &rng) = 0;
private:
std::vector<FermionField> noise_;
GridCartesian *grid_;
unsigned int nNoise_;
};
template <typename FImpl>
class TimeDilutedSpinColorDiagonalNoise: public DilutedNoise<FImpl>
{
public:
typedef typename FImpl::FermionField FermionField;
public:
// constructor/destructor
TimeDilutedSpinColorDiagonalNoise(GridCartesian *g);
virtual ~TimeDilutedSpinColorDiagonalNoise(void) = default;
// generate noise
virtual void generateNoise(GridParallelRNG &rng);
private:
unsigned int nt_;
};
template <typename FImpl>
class FullVolumeSpinColorDiagonalNoise: public DilutedNoise<FImpl>
{
public:
typedef typename FImpl::FermionField FermionField;
public:
// constructor/destructor
FullVolumeSpinColorDiagonalNoise(GridCartesian *g, unsigned int n_src);
virtual ~FullVolumeSpinColorDiagonalNoise(void) = default;
// generate noise
virtual void generateNoise(GridParallelRNG &rng);
private:
unsigned int nSrc_;
};
/******************************************************************************
* DilutedNoise template implementation *
******************************************************************************/
template <typename FImpl>
DilutedNoise<FImpl>::DilutedNoise(GridCartesian *g)
: grid_(g)
{}
template <typename FImpl>
DilutedNoise<FImpl>::DilutedNoise(GridCartesian *g,
const unsigned int nNoise)
: DilutedNoise(g)
{
resize(nNoise);
}
template <typename FImpl>
std::vector<typename DilutedNoise<FImpl>::FermionField> & DilutedNoise<FImpl>::
getNoise(void)
{
return noise_;
}
template <typename FImpl>
const std::vector<typename DilutedNoise<FImpl>::FermionField> & DilutedNoise<FImpl>::
getNoise(void) const
{
return noise_;
}
template <typename FImpl>
const typename DilutedNoise<FImpl>::FermionField &
DilutedNoise<FImpl>::operator[](const unsigned int i) const
{
return noise_[i];
}
template <typename FImpl>
typename DilutedNoise<FImpl>::FermionField &
DilutedNoise<FImpl>::operator[](const unsigned int i)
{
return noise_[i];
}
template <typename FImpl>
void DilutedNoise<FImpl>::resize(const unsigned int nNoise)
{
nNoise_ = nNoise;
noise_.resize(nNoise, grid_);
}
template <typename FImpl>
unsigned int DilutedNoise<FImpl>::size(void) const
{
return noise_.size();
}
template <typename FImpl>
GridCartesian * DilutedNoise<FImpl>::getGrid(void) const
{
return grid_;
}
/******************************************************************************
* TimeDilutedSpinColorDiagonalNoise template implementation *
******************************************************************************/
template <typename FImpl>
TimeDilutedSpinColorDiagonalNoise<FImpl>::
TimeDilutedSpinColorDiagonalNoise(GridCartesian *g)
: DilutedNoise<FImpl>(g)
{
nt_ = this->getGrid()->GlobalDimensions().back();
this->resize(nt_*Ns*FImpl::Dimension);
}
template <typename FImpl>
void TimeDilutedSpinColorDiagonalNoise<FImpl>::generateNoise(GridParallelRNG &rng)
{
typedef decltype(peekColour((*this)[0], 0)) SpinField;
auto &noise = *this;
auto g = this->getGrid();
auto nd = g->GlobalDimensions().size();
auto nc = FImpl::Dimension;
Complex shift(1., 1.);
Lattice<iScalar<vInteger>> tLat(g);
LatticeComplex eta(g), etaCut(g);
SpinField etas(g);
unsigned int i = 0;
LatticeCoordinate(tLat, nd - 1);
bernoulli(rng, eta);
eta = (2.*eta - shift)*(1./::sqrt(2.));
for (unsigned int t = 0; t < nt_; ++t)
{
etaCut = where((tLat == t), eta, 0.*eta);
for (unsigned int s = 0; s < Ns; ++s)
{
etas = zero;
pokeSpin(etas, etaCut, s);
for (unsigned int c = 0; c < nc; ++c)
{
noise[i] = zero;
pokeColour(noise[i], etas, c);
i++;
}
}
}
}
/******************************************************************************
* FullVolumeSpinColorDiagonalNoise template implementation *
******************************************************************************/
template <typename FImpl>
FullVolumeSpinColorDiagonalNoise<FImpl>::
FullVolumeSpinColorDiagonalNoise(GridCartesian *g, unsigned int nSrc)
: DilutedNoise<FImpl>(g, nSrc*Ns*FImpl::Dimension), nSrc_(nSrc)
{}
template <typename FImpl>
void FullVolumeSpinColorDiagonalNoise<FImpl>::generateNoise(GridParallelRNG &rng)
{
typedef decltype(peekColour((*this)[0], 0)) SpinField;
auto &noise = *this;
auto g = this->getGrid();
auto nd = g->GlobalDimensions().size();
auto nc = FImpl::Dimension;
Complex shift(1., 1.);
LatticeComplex eta(g);
SpinField etas(g);
unsigned int i = 0;
bernoulli(rng, eta);
eta = (2.*eta - shift)*(1./::sqrt(2.));
for (unsigned int n = 0; n < nSrc_; ++n)
{
for (unsigned int s = 0; s < Ns; ++s)
{
etas = zero;
pokeSpin(etas, eta, s);
for (unsigned int c = 0; c < nc; ++c)
{
noise[i] = zero;
pokeColour(noise[i], etas, c);
i++;
}
}
}
}
END_HADRONS_NAMESPACE
#endif // Hadrons_DilutedNoise_hpp_

View File

@ -1,456 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/DiskVector.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_DiskVector_hpp_
#define Hadrons_DiskVector_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/A2AMatrix.hpp>
#include <deque>
#include <sys/stat.h>
#include <ftw.h>
#include <unistd.h>
#ifdef DV_DEBUG
#define DV_DEBUG_MSG(dv, stream) LOG(Debug) << "diskvector " << (dv) << ": " << stream << std::endl
#else
#define DV_DEBUG_MSG(dv, stream)
#endif
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Abstract base class *
******************************************************************************/
template <typename T>
class DiskVectorBase
{
public:
typedef T ObjectType;
// helper for read/write vector access
class RwAccessHelper
{
public:
RwAccessHelper(DiskVectorBase<T> &master, const unsigned int i)
: master_(master), cmaster_(master), i_(i) {}
// operator=: somebody is trying to store a vector element
// write to cache and tag as modified
T &operator=(const T &obj) const
{
auto &cache = *master_.cachePtr_;
auto &modified = *master_.modifiedPtr_;
auto &index = *master_.indexPtr_;
DV_DEBUG_MSG(&master_, "writing to " << i_);
master_.cacheInsert(i_, obj);
modified[index.at(i_)] = true;
return cache[index.at(i_)];
}
// implicit cast to const object reference and redirection
// to the const operator[] for read-only operations
operator const T&() const
{
return cmaster_[i_];
}
private:
DiskVectorBase<T> &master_;
const DiskVectorBase<T> &cmaster_;
const unsigned int i_;
};
public:
DiskVectorBase(const std::string dirname, const unsigned int size = 0,
const unsigned int cacheSize = 1, const bool clean = true);
DiskVectorBase(DiskVectorBase<T> &&v) = default;
virtual ~DiskVectorBase(void);
const T & operator[](const unsigned int i) const;
RwAccessHelper operator[](const unsigned int i);
double hitRatio(void) const;
void resetStat(void);
private:
virtual void load(T &obj, const std::string filename) const = 0;
virtual void save(const std::string filename, const T &obj) const = 0;
virtual std::string filename(const unsigned int i) const;
void evict(void) const;
void fetch(const unsigned int i) const;
void cacheInsert(const unsigned int i, const T &obj) const;
void clean(void);
private:
std::string dirname_;
unsigned int size_, cacheSize_;
double access_{0.}, hit_{0.};
bool clean_;
// using pointers to allow modifications when class is const
// semantic: const means data unmodified, but cache modification allowed
std::unique_ptr<std::vector<T>> cachePtr_;
std::unique_ptr<std::vector<bool>> modifiedPtr_;
std::unique_ptr<std::map<unsigned int, unsigned int>> indexPtr_;
std::unique_ptr<std::stack<unsigned int>> freePtr_;
std::unique_ptr<std::deque<unsigned int>> loadsPtr_;
};
/******************************************************************************
* Specialisation for serialisable classes *
******************************************************************************/
template <typename T, typename Reader, typename Writer>
class SerializableDiskVector: public DiskVectorBase<T>
{
public:
using DiskVectorBase<T>::DiskVectorBase;
private:
virtual void load(T &obj, const std::string filename) const
{
Reader reader(filename);
read(reader, basename(filename), obj);
}
virtual void save(const std::string filename, const T &obj) const
{
Writer writer(filename);
write(writer, basename(filename), obj);
}
};
/******************************************************************************
* Specialisation for Eigen matrices *
******************************************************************************/
template <typename T>
using EigenDiskVectorMat = A2AMatrix<T>;
template <typename T>
class EigenDiskVector: public DiskVectorBase<EigenDiskVectorMat<T>>
{
public:
using DiskVectorBase<EigenDiskVectorMat<T>>::DiskVectorBase;
typedef EigenDiskVectorMat<T> Matrix;
public:
T operator()(const unsigned int i, const Eigen::Index j,
const Eigen::Index k) const
{
return (*this)[i](j, k);
}
private:
virtual void load(EigenDiskVectorMat<T> &obj, const std::string filename) const
{
std::ifstream f(filename, std::ios::binary);
uint32_t crc, check;
Eigen::Index nRow, nCol;
size_t matSize;
double tRead, tHash;
f.read(reinterpret_cast<char *>(&crc), sizeof(crc));
f.read(reinterpret_cast<char *>(&nRow), sizeof(nRow));
f.read(reinterpret_cast<char *>(&nCol), sizeof(nCol));
obj.resize(nRow, nCol);
matSize = nRow*nCol*sizeof(T);
tRead = -usecond();
f.read(reinterpret_cast<char *>(obj.data()), matSize);
tRead += usecond();
tHash = -usecond();
#ifdef USE_IPP
check = GridChecksum::crc32c(obj.data(), matSize);
#else
check = GridChecksum::crc32(obj.data(), matSize);
#endif
tHash += usecond();
DV_DEBUG_MSG(this, "Eigen read " << tRead/1.0e6 << " sec " << matSize/tRead*1.0e6/1024/1024 << " MB/s");
DV_DEBUG_MSG(this, "Eigen crc32 " << std::hex << check << std::dec
<< " " << tHash/1.0e6 << " sec " << matSize/tHash*1.0e6/1024/1024 << " MB/s");
if (crc != check)
{
HADRONS_ERROR(Io, "checksum failed")
}
}
virtual void save(const std::string filename, const EigenDiskVectorMat<T> &obj) const
{
std::ofstream f(filename, std::ios::binary);
uint32_t crc;
Eigen::Index nRow, nCol;
size_t matSize;
double tWrite, tHash;
nRow = obj.rows();
nCol = obj.cols();
matSize = nRow*nCol*sizeof(T);
tHash = -usecond();
#ifdef USE_IPP
crc = GridChecksum::crc32c(obj.data(), matSize);
#else
crc = GridChecksum::crc32(obj.data(), matSize);
#endif
tHash += usecond();
f.write(reinterpret_cast<char *>(&crc), sizeof(crc));
f.write(reinterpret_cast<char *>(&nRow), sizeof(nRow));
f.write(reinterpret_cast<char *>(&nCol), sizeof(nCol));
tWrite = -usecond();
f.write(reinterpret_cast<const char *>(obj.data()), matSize);
tWrite += usecond();
DV_DEBUG_MSG(this, "Eigen write " << tWrite/1.0e6 << " sec " << matSize/tWrite*1.0e6/1024/1024 << " MB/s");
DV_DEBUG_MSG(this, "Eigen crc32 " << std::hex << crc << std::dec
<< " " << tHash/1.0e6 << " sec " << matSize/tHash*1.0e6/1024/1024 << " MB/s");
}
};
/******************************************************************************
* DiskVectorBase implementation *
******************************************************************************/
template <typename T>
DiskVectorBase<T>::DiskVectorBase(const std::string dirname,
const unsigned int size,
const unsigned int cacheSize,
const bool clean)
: dirname_(dirname), size_(size), cacheSize_(cacheSize), clean_(clean)
, cachePtr_(new std::vector<T>(size))
, modifiedPtr_(new std::vector<bool>(size, false))
, indexPtr_(new std::map<unsigned int, unsigned int>())
, freePtr_(new std::stack<unsigned int>)
, loadsPtr_(new std::deque<unsigned int>())
{
struct stat s;
if(stat(dirname.c_str(), &s) == 0)
{
HADRONS_ERROR(Io, "directory '" + dirname + "' already exists")
}
mkdir(dirname);
for (unsigned int i = 0; i < cacheSize_; ++i)
{
freePtr_->push(i);
}
}
template <typename T>
DiskVectorBase<T>::~DiskVectorBase(void)
{
if (clean_)
{
clean();
}
}
template <typename T>
const T & DiskVectorBase<T>::operator[](const unsigned int i) const
{
auto &cache = *cachePtr_;
auto &index = *indexPtr_;
auto &freeInd = *freePtr_;
auto &loads = *loadsPtr_;
DV_DEBUG_MSG(this, "accessing " << i << " (RO)");
if (i >= size_)
{
HADRONS_ERROR(Size, "index out of range");
}
const_cast<double &>(access_)++;
if (index.find(i) == index.end())
{
// cache miss
DV_DEBUG_MSG(this, "cache miss");
fetch(i);
}
else
{
DV_DEBUG_MSG(this, "cache hit");
auto pos = std::find(loads.begin(), loads.end(), i);
const_cast<double &>(hit_)++;
loads.erase(pos);
loads.push_back(i);
}
#ifdef DV_DEBUG
std::string msg;
for (auto &p: loads)
{
msg += std::to_string(p) + " ";
}
DV_DEBUG_MSG(this, "in cache: " << msg);
#endif
return cache[index.at(i)];
}
template <typename T>
typename DiskVectorBase<T>::RwAccessHelper DiskVectorBase<T>::operator[](const unsigned int i)
{
DV_DEBUG_MSG(this, "accessing " << i << " (RW)");
if (i >= size_)
{
HADRONS_ERROR(Size, "index out of range");
}
return RwAccessHelper(*this, i);
}
template <typename T>
double DiskVectorBase<T>::hitRatio(void) const
{
return hit_/access_;
}
template <typename T>
void DiskVectorBase<T>::resetStat(void)
{
access_ = 0.;
hit_ = 0.;
}
template <typename T>
std::string DiskVectorBase<T>::filename(const unsigned int i) const
{
return dirname_ + "/elem_" + std::to_string(i);
}
template <typename T>
void DiskVectorBase<T>::evict(void) const
{
auto &cache = *cachePtr_;
auto &modified = *modifiedPtr_;
auto &index = *indexPtr_;
auto &freeInd = *freePtr_;
auto &loads = *loadsPtr_;
if (index.size() >= cacheSize_)
{
unsigned int i = loads.front();
DV_DEBUG_MSG(this, "evicting " << i);
if (modified[index.at(i)])
{
DV_DEBUG_MSG(this, "element " << i << " modified, saving to disk");
save(filename(i), cache[index.at(i)]);
}
freeInd.push(index.at(i));
index.erase(i);
loads.pop_front();
}
}
template <typename T>
void DiskVectorBase<T>::fetch(const unsigned int i) const
{
auto &cache = *cachePtr_;
auto &modified = *modifiedPtr_;
auto &index = *indexPtr_;
auto &freeInd = *freePtr_;
auto &loads = *loadsPtr_;
struct stat s;
DV_DEBUG_MSG(this, "loading " << i << " from disk");
evict();
if(stat(filename(i).c_str(), &s) != 0)
{
HADRONS_ERROR(Io, "disk vector element " + std::to_string(i) + " uninitialised");
}
index[i] = freeInd.top();
freeInd.pop();
load(cache[index.at(i)], filename(i));
loads.push_back(i);
modified[index.at(i)] = false;
}
template <typename T>
void DiskVectorBase<T>::cacheInsert(const unsigned int i, const T &obj) const
{
auto &cache = *cachePtr_;
auto &modified = *modifiedPtr_;
auto &index = *indexPtr_;
auto &freeInd = *freePtr_;
auto &loads = *loadsPtr_;
// cache miss, evict and store
if (index.find(i) == index.end())
{
evict();
index[i] = freeInd.top();
freeInd.pop();
cache[index.at(i)] = obj;
loads.push_back(i);
modified[index.at(i)] = false;
}
// cache hit, modify current value
else
{
auto pos = std::find(loads.begin(), loads.end(), i);
cache[index.at(i)] = obj;
modified[index.at(i)] = true;
loads.erase(pos);
loads.push_back(i);
}
#ifdef DV_DEBUG
std::string msg;
for (auto &p: loads)
{
msg += std::to_string(p) + " ";
}
DV_DEBUG_MSG(this, "in cache: " << msg);
#endif
}
#ifdef DV_DEBUG
#undef DV_DEBUG_MSG
#endif
template <typename T>
void DiskVectorBase<T>::clean(void)
{
auto unlink = [](const char *fpath, const struct stat *sb,
int typeflag, struct FTW *ftwbuf)
{
int rv = remove(fpath);
if (rv)
{
HADRONS_ERROR(Io, "cannot remove '" + std::string(fpath) + "': "
+ std::string(std::strerror(errno)));
}
return rv;
};
nftw(dirname_.c_str(), unlink, 64, FTW_DEPTH | FTW_PHYS);
}
END_HADRONS_NAMESPACE
#endif // Hadrons_DiskVector_hpp_

View File

@ -1,416 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/EigenPack.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_EigenPack_hpp_
#define Hadrons_EigenPack_hpp_
#include <Hadrons/Global.hpp>
#include <Grid/algorithms/iterative/Deflation.h>
#include <Grid/algorithms/iterative/LocalCoherenceLanczos.h>
BEGIN_HADRONS_NAMESPACE
// Lanczos type
#ifndef HADRONS_DEFAULT_LANCZOS_NBASIS
#define HADRONS_DEFAULT_LANCZOS_NBASIS 60
#endif
#define HADRONS_DUMP_EP_METADATA(record) \
LOG(Message) << "Eigenpack metadata:" << std::endl;\
LOG(Message) << "* operator" << std::endl;\
LOG(Message) << (record).operatorXml << std::endl;\
LOG(Message) << "* solver" << std::endl;\
LOG(Message) << (record).solverXml << std::endl;
struct PackRecord
{
std::string operatorXml, solverXml;
};
struct VecRecord: Serializable
{
GRID_SERIALIZABLE_CLASS_MEMBERS(VecRecord,
unsigned int, index,
double, eval);
VecRecord(void): index(0), eval(0.) {}
};
namespace EigenPackIo
{
inline void readHeader(PackRecord &record, ScidacReader &binReader)
{
std::string recordXml;
binReader.readLimeObject(recordXml, SCIDAC_FILE_XML);
XmlReader xmlReader(recordXml, true, "eigenPackPar");
xmlReader.push();
xmlReader.readCurrentSubtree(record.operatorXml);
xmlReader.nextElement();
xmlReader.readCurrentSubtree(record.solverXml);
}
template <typename T, typename TIo = T>
void readElement(T &evec, RealD &eval, const unsigned int index,
ScidacReader &binReader, TIo *ioBuf = nullptr)
{
VecRecord vecRecord;
LOG(Message) << "Reading eigenvector " << index << std::endl;
if (ioBuf == nullptr)
{
binReader.readScidacFieldRecord(evec, vecRecord);
}
else
{
binReader.readScidacFieldRecord(*ioBuf, vecRecord);
precisionChange(evec, *ioBuf);
}
if (vecRecord.index != index)
{
HADRONS_ERROR(Io, "Eigenvector " + std::to_string(index) + " has a"
+ " wrong index (expected " + std::to_string(vecRecord.index)
+ ")");
}
eval = vecRecord.eval;
}
template <typename T, typename TIo = T>
static void readPack(std::vector<T> &evec, std::vector<RealD> &eval,
PackRecord &record, const std::string filename,
const unsigned int size, bool multiFile,
GridBase *gridIo = nullptr)
{
std::unique_ptr<TIo> ioBuf{nullptr};
ScidacReader binReader;
if (typeHash<T>() != typeHash<TIo>())
{
if (gridIo == nullptr)
{
HADRONS_ERROR(Definition,
"I/O type different from vector type but null I/O grid passed");
}
ioBuf.reset(new TIo(gridIo));
}
if (multiFile)
{
std::string fullFilename;
for(int k = 0; k < size; ++k)
{
fullFilename = filename + "/v" + std::to_string(k) + ".bin";
binReader.open(fullFilename);
readHeader(record, binReader);
readElement(evec[k], eval[k], k, binReader, ioBuf.get());
binReader.close();
}
}
else
{
binReader.open(filename);
readHeader(record, binReader);
for(int k = 0; k < size; ++k)
{
readElement(evec[k], eval[k], k, binReader, ioBuf.get());
}
binReader.close();
}
}
inline void writeHeader(ScidacWriter &binWriter, PackRecord &record)
{
XmlWriter xmlWriter("", "eigenPackPar");
xmlWriter.pushXmlString(record.operatorXml);
xmlWriter.pushXmlString(record.solverXml);
binWriter.writeLimeObject(1, 1, xmlWriter, "parameters", SCIDAC_FILE_XML);
}
template <typename T, typename TIo = T>
void writeElement(ScidacWriter &binWriter, T &evec, RealD &eval,
const unsigned int index, TIo *ioBuf,
T *testBuf = nullptr)
{
VecRecord vecRecord;
LOG(Message) << "Writing eigenvector " << index << std::endl;
vecRecord.eval = eval;
vecRecord.index = index;
if ((ioBuf == nullptr) || (testBuf == nullptr))
{
binWriter.writeScidacFieldRecord(evec, vecRecord, DEFAULT_ASCII_PREC);
}
else
{
precisionChange(*ioBuf, evec);
precisionChange(*testBuf, *ioBuf);
*testBuf -= evec;
LOG(Message) << "Precision diff norm^2 " << norm2(*testBuf) << std::endl;
binWriter.writeScidacFieldRecord(*ioBuf, vecRecord, DEFAULT_ASCII_PREC);
}
}
template <typename T, typename TIo = T>
static void writePack(const std::string filename, std::vector<T> &evec,
std::vector<RealD> &eval, PackRecord &record,
const unsigned int size, bool multiFile,
GridBase *gridIo = nullptr)
{
GridBase *grid = evec[0]._grid;
std::unique_ptr<TIo> ioBuf{nullptr};
std::unique_ptr<T> testBuf{nullptr};
ScidacWriter binWriter(grid->IsBoss());
if (typeHash<T>() != typeHash<TIo>())
{
if (gridIo == nullptr)
{
HADRONS_ERROR(Definition,
"I/O type different from vector type but null I/O grid passed");
}
ioBuf.reset(new TIo(gridIo));
testBuf.reset(new T(grid));
}
if (multiFile)
{
std::string fullFilename;
for(int k = 0; k < size; ++k)
{
fullFilename = filename + "/v" + std::to_string(k) + ".bin";
makeFileDir(fullFilename, grid);
binWriter.open(fullFilename);
writeHeader(binWriter, record);
writeElement(binWriter, evec[k], eval[k], k, ioBuf.get(), testBuf.get());
binWriter.close();
}
}
else
{
makeFileDir(filename, grid);
binWriter.open(filename);
writeHeader(binWriter, record);
for(int k = 0; k < size; ++k)
{
writeElement(binWriter, evec[k], eval[k], k, ioBuf.get(), testBuf.get());
}
binWriter.close();
}
}
}
template <typename F>
class BaseEigenPack
{
public:
typedef F Field;
public:
std::vector<RealD> eval;
std::vector<F> evec;
PackRecord record;
public:
BaseEigenPack(void) = default;
BaseEigenPack(const size_t size, GridBase *grid)
{
resize(size, grid);
}
virtual ~BaseEigenPack(void) = default;
void resize(const size_t size, GridBase *grid)
{
eval.resize(size);
evec.resize(size, grid);
}
};
template <typename F, typename FIo = F>
class EigenPack: public BaseEigenPack<F>
{
public:
typedef F Field;
typedef FIo FieldIo;
public:
EigenPack(void) = default;
virtual ~EigenPack(void) = default;
EigenPack(const size_t size, GridBase *grid, GridBase *gridIo = nullptr)
: BaseEigenPack<F>(size, grid)
{
if (typeHash<F>() != typeHash<FIo>())
{
if (gridIo == nullptr)
{
HADRONS_ERROR(Definition,
"I/O type different from vector type but null I/O grid passed");
}
}
gridIo_ = gridIo;
}
virtual void read(const std::string fileStem, const bool multiFile, const int traj = -1)
{
EigenPackIo::readPack<F, FIo>(this->evec, this->eval, this->record,
evecFilename(fileStem, traj, multiFile),
this->evec.size(), multiFile, gridIo_);
HADRONS_DUMP_EP_METADATA(this->record);
}
virtual void write(const std::string fileStem, const bool multiFile, const int traj = -1)
{
EigenPackIo::writePack<F, FIo>(evecFilename(fileStem, traj, multiFile),
this->evec, this->eval, this->record,
this->evec.size(), multiFile, gridIo_);
}
protected:
std::string evecFilename(const std::string stem, const int traj, const bool multiFile)
{
std::string t = (traj < 0) ? "" : ("." + std::to_string(traj));
if (multiFile)
{
return stem + t;
}
else
{
return stem + t + ".bin";
}
}
protected:
GridBase *gridIo_;
};
template <typename FineF, typename CoarseF,
typename FineFIo = FineF, typename CoarseFIo = CoarseF>
class CoarseEigenPack: public EigenPack<FineF, FineFIo>
{
public:
typedef CoarseF CoarseField;
typedef CoarseFIo CoarseFieldIo;
public:
std::vector<CoarseF> evecCoarse;
std::vector<RealD> evalCoarse;
public:
CoarseEigenPack(void) = default;
virtual ~CoarseEigenPack(void) = default;
CoarseEigenPack(const size_t sizeFine, const size_t sizeCoarse,
GridBase *gridFine, GridBase *gridCoarse,
GridBase *gridFineIo = nullptr,
GridBase *gridCoarseIo = nullptr)
{
if (typeHash<FineF>() != typeHash<FineFIo>())
{
if (gridFineIo == nullptr)
{
HADRONS_ERROR(Definition,
"Fine I/O type different from vector type but null fine I/O grid passed");
}
}
if (typeHash<CoarseF>() != typeHash<CoarseFIo>())
{
if (gridCoarseIo == nullptr)
{
HADRONS_ERROR(Definition,
"Coarse I/O type different from vector type but null coarse I/O grid passed");
}
}
this->gridIo_ = gridFineIo;
gridCoarseIo_ = gridCoarseIo;
resize(sizeFine, sizeCoarse, gridFine, gridCoarse);
}
void resize(const size_t sizeFine, const size_t sizeCoarse,
GridBase *gridFine, GridBase *gridCoarse)
{
EigenPack<FineF, FineFIo>::resize(sizeFine, gridFine);
evalCoarse.resize(sizeCoarse);
evecCoarse.resize(sizeCoarse, gridCoarse);
}
void readFine(const std::string fileStem, const bool multiFile, const int traj = -1)
{
EigenPack<FineF, FineFIo>::read(fileStem + "_fine", multiFile, traj);
}
void readCoarse(const std::string fileStem, const bool multiFile, const int traj = -1)
{
PackRecord dummy;
EigenPackIo::readPack<CoarseF, CoarseFIo>(evecCoarse, evalCoarse, dummy,
this->evecFilename(fileStem + "_coarse", traj, multiFile),
evecCoarse.size(), multiFile, gridCoarseIo_);
}
virtual void read(const std::string fileStem, const bool multiFile, const int traj = -1)
{
readFine(fileStem, multiFile, traj);
readCoarse(fileStem, multiFile, traj);
}
void writeFine(const std::string fileStem, const bool multiFile, const int traj = -1)
{
EigenPack<FineF, FineFIo>::write(fileStem + "_fine", multiFile, traj);
}
void writeCoarse(const std::string fileStem, const bool multiFile, const int traj = -1)
{
EigenPackIo::writePack<CoarseF, CoarseFIo>(this->evecFilename(fileStem + "_coarse", traj, multiFile),
evecCoarse, evalCoarse, this->record,
evecCoarse.size(), multiFile, gridCoarseIo_);
}
virtual void write(const std::string fileStem, const bool multiFile, const int traj = -1)
{
writeFine(fileStem, multiFile, traj);
writeCoarse(fileStem, multiFile, traj);
}
private:
GridBase *gridCoarseIo_;
};
template <typename FImpl>
using BaseFermionEigenPack = BaseEigenPack<typename FImpl::FermionField>;
template <typename FImpl, typename FImplIo = FImpl>
using FermionEigenPack = EigenPack<typename FImpl::FermionField, typename FImplIo::FermionField>;
template <typename FImpl, int nBasis, typename FImplIo = FImpl>
using CoarseFermionEigenPack = CoarseEigenPack<
typename FImpl::FermionField,
typename LocalCoherenceLanczos<typename FImpl::SiteSpinor,
typename FImpl::SiteComplex,
nBasis>::CoarseField,
typename FImplIo::FermionField,
typename LocalCoherenceLanczos<typename FImplIo::SiteSpinor,
typename FImplIo::SiteComplex,
nBasis>::CoarseField>;
#undef HADRONS_DUMP_EP_METADATA
END_HADRONS_NAMESPACE
#endif // Hadrons_EigenPack_hpp_

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@ -1,585 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Environment.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_Environment_hpp_
#define Hadrons_Environment_hpp_
#include <Hadrons/Global.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Global environment *
******************************************************************************/
class Object
{
public:
Object(void) = default;
virtual ~Object(void) = default;
};
template <typename T>
class Holder: public Object
{
public:
Holder(void) = default;
Holder(T *pt);
virtual ~Holder(void) = default;
T & get(void) const;
T * getPt(void) const;
void reset(T *pt);
private:
std::unique_ptr<T> objPt_{nullptr};
};
#define DEFINE_ENV_ALIAS \
inline Environment & env(void) const\
{\
return Environment::getInstance();\
}
#define DEFINE_ENV_LAMBDA \
auto env = [](void)->Environment &{return Environment::getInstance();}
class Environment
{
SINGLETON(Environment);
public:
typedef SITE_SIZE_TYPE Size;
typedef std::unique_ptr<GridCartesian> GridPt;
typedef std::unique_ptr<GridRedBlackCartesian> GridRbPt;
typedef std::unique_ptr<GridParallelRNG> RngPt;
enum class Storage {object, cache, temporary};
private:
struct ObjInfo
{
Size size{0};
Storage storage{Storage::object};
unsigned int Ls{0};
const std::type_info *type{nullptr}, *derivedType{nullptr};
std::string name;
int module{-1};
std::unique_ptr<Object> data{nullptr};
};
typedef std::pair<size_t, unsigned int> FineGridKey;
typedef std::pair<size_t, std::vector<int>> CoarseGridKey;
public:
// grids
template <typename VType = vComplex>
void createGrid(const unsigned int Ls);
template <typename VType = vComplex>
void createCoarseGrid(const std::vector<int> &blockSize,
const unsigned int Ls);
template <typename VType = vComplex>
GridCartesian * getGrid(void);
template <typename VType = vComplex>
GridRedBlackCartesian * getRbGrid(void);
template <typename VType = vComplex>
GridCartesian * getCoarseGrid(const std::vector<int> &blockSize);
template <typename VType = vComplex>
GridCartesian * getGrid(const unsigned int Ls);
template <typename VType = vComplex>
GridRedBlackCartesian * getRbGrid(const unsigned int Ls);
template <typename VType = vComplex>
GridCartesian * getCoarseGrid(const std::vector<int> &blockSize,
const unsigned int Ls);
std::vector<int> getDim(void) const;
int getDim(const unsigned int mu) const;
unsigned int getNd(void) const;
double getVolume(void) const;
// random number generator
GridParallelRNG * get4dRng(void);
// general memory management
void addObject(const std::string name,
const int moduleAddress = -1);
template <typename B, typename T, typename ... Ts>
void createDerivedObject(const std::string name,
const Environment::Storage storage,
const unsigned int Ls,
Ts && ... args);
template <typename T, typename ... Ts>
void createObject(const std::string name,
const Environment::Storage storage,
const unsigned int Ls,
Ts && ... args);
void setObjectModule(const unsigned int objAddress,
const int modAddress);
template <typename B, typename T>
T * getDerivedObject(const unsigned int address) const;
template <typename B, typename T>
T * getDerivedObject(const std::string name) const;
template <typename T>
T * getObject(const unsigned int address) const;
template <typename T>
T * getObject(const std::string name) const;
unsigned int getMaxAddress(void) const;
unsigned int getObjectAddress(const std::string name) const;
std::string getObjectName(const unsigned int address) const;
std::string getObjectType(const unsigned int address) const;
std::string getObjectType(const std::string name) const;
Size getObjectSize(const unsigned int address) const;
Size getObjectSize(const std::string name) const;
Storage getObjectStorage(const unsigned int address) const;
Storage getObjectStorage(const std::string name) const;
int getObjectModule(const unsigned int address) const;
int getObjectModule(const std::string name) const;
unsigned int getObjectLs(const unsigned int address) const;
unsigned int getObjectLs(const std::string name) const;
bool hasObject(const unsigned int address) const;
bool hasObject(const std::string name) const;
bool hasCreatedObject(const unsigned int address) const;
bool hasCreatedObject(const std::string name) const;
bool isObject5d(const unsigned int address) const;
bool isObject5d(const std::string name) const;
template <typename T>
bool isObjectOfType(const unsigned int address) const;
template <typename T>
bool isObjectOfType(const std::string name) const;
Environment::Size getTotalSize(void) const;
void freeObject(const unsigned int address);
void freeObject(const std::string name);
void freeAll(void);
void protectObjects(const bool protect);
bool objectsProtected(void) const;
// print environment content
void printContent(void) const;
private:
// general
double vol_;
bool protect_{true};
// grids
std::vector<int> dim_;
std::map<FineGridKey, GridPt> grid4d_;
std::map<FineGridKey, GridPt> grid5d_;
std::map<FineGridKey, GridRbPt> gridRb4d_;
std::map<FineGridKey, GridRbPt> gridRb5d_;
std::map<CoarseGridKey, GridPt> gridCoarse4d_;
std::map<CoarseGridKey, GridPt> gridCoarse5d_;
unsigned int nd_;
// random number generator
RngPt rng4d_{nullptr};
// object store
std::vector<ObjInfo> object_;
std::map<std::string, unsigned int> objectAddress_;
};
/******************************************************************************
* Holder template implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename T>
Holder<T>::Holder(T *pt)
: objPt_(pt)
{}
// access //////////////////////////////////////////////////////////////////////
template <typename T>
T & Holder<T>::get(void) const
{
return *objPt_.get();
}
template <typename T>
T * Holder<T>::getPt(void) const
{
return objPt_.get();
}
template <typename T>
void Holder<T>::reset(T *pt)
{
objPt_.reset(pt);
}
/******************************************************************************
* Environment template implementation *
******************************************************************************/
// grids ///////////////////////////////////////////////////////////////////////
#define HADRONS_DUMP_GRID(...)\
LOG(Debug) << "New grid " << (__VA_ARGS__) << std::endl;\
LOG(Debug) << " - cb : " << (__VA_ARGS__)->_isCheckerBoarded << std::endl;\
LOG(Debug) << " - fdim: " << (__VA_ARGS__)->_fdimensions << std::endl;\
LOG(Debug) << " - gdim: " << (__VA_ARGS__)->_gdimensions << std::endl;\
LOG(Debug) << " - ldim: " << (__VA_ARGS__)->_ldimensions << std::endl;\
LOG(Debug) << " - rdim: " << (__VA_ARGS__)->_rdimensions << std::endl;
template <typename VType>
void Environment::createGrid(const unsigned int Ls)
{
size_t hash = typeHash<VType>();
if (grid4d_.find({hash, 1}) == grid4d_.end())
{
grid4d_[{hash, 1}].reset(
SpaceTimeGrid::makeFourDimGrid(getDim(),
GridDefaultSimd(getNd(), VType::Nsimd()),
GridDefaultMpi()));
HADRONS_DUMP_GRID(grid4d_[{hash, 1}].get());
gridRb4d_[{hash, 1}].reset(
SpaceTimeGrid::makeFourDimRedBlackGrid(grid4d_[{hash, 1}].get()));
HADRONS_DUMP_GRID(gridRb4d_[{hash, 1}].get());
}
if (grid5d_.find({hash, Ls}) == grid5d_.end())
{
auto g = grid4d_[{hash, 1}].get();
grid5d_[{hash, Ls}].reset(SpaceTimeGrid::makeFiveDimGrid(Ls, g));
HADRONS_DUMP_GRID(grid5d_[{hash, Ls}].get());
gridRb5d_[{hash, Ls}].reset(SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls, g));
HADRONS_DUMP_GRID(gridRb5d_[{hash, Ls}].get());
}
}
template <typename VType>
void Environment::createCoarseGrid(const std::vector<int> &blockSize,
const unsigned int Ls)
{
int nd = getNd();
std::vector<int> fineDim = getDim(), coarseDim(nd);
unsigned int cLs;
auto key4d = blockSize, key5d = blockSize;
size_t hash = typeHash<VType>();
createGrid(Ls);
for (int d = 0; d < coarseDim.size(); d++)
{
coarseDim[d] = fineDim[d]/blockSize[d];
if (coarseDim[d]*blockSize[d] != fineDim[d])
{
HADRONS_ERROR(Size, "Fine dimension " + std::to_string(d)
+ " (" + std::to_string(fineDim[d])
+ ") not divisible by coarse dimension ("
+ std::to_string(coarseDim[d]) + ")");
}
}
if (blockSize.size() > nd)
{
cLs = Ls/blockSize[nd];
if (cLs*blockSize[nd] != Ls)
{
HADRONS_ERROR(Size, "Fine Ls (" + std::to_string(Ls)
+ ") not divisible by coarse Ls ("
+ std::to_string(cLs) + ")");
}
}
else
{
cLs = Ls;
}
key4d.resize(nd);
key5d.push_back(Ls);
CoarseGridKey hkey4d = {hash, key4d}, hkey5d = {hash, key5d};
if (gridCoarse4d_.find(hkey4d) == gridCoarse4d_.end())
{
gridCoarse4d_[hkey4d].reset(
SpaceTimeGrid::makeFourDimGrid(coarseDim,
GridDefaultSimd(nd, VType::Nsimd()), GridDefaultMpi()));
HADRONS_DUMP_GRID(gridCoarse4d_[hkey4d].get());
}
if (gridCoarse5d_.find(hkey5d) == gridCoarse5d_.end())
{
gridCoarse5d_[hkey5d].reset(
SpaceTimeGrid::makeFiveDimGrid(cLs, gridCoarse4d_[hkey4d].get()));
HADRONS_DUMP_GRID(gridCoarse5d_[hkey5d].get());
}
}
#undef HADRONS_DUMP_GRID
template <typename VType>
GridCartesian * Environment::getGrid(void)
{
FineGridKey key = {typeHash<VType>(), 1};
auto it = grid4d_.find(key);
if (it != grid4d_.end())
{
return it->second.get();
}
else
{
createGrid<VType>(1);
return grid4d_.at(key).get();
}
}
template <typename VType>
GridRedBlackCartesian * Environment::getRbGrid(void)
{
FineGridKey key = {typeHash<VType>(), 1};
auto it = gridRb4d_.find(key);
if (it != gridRb4d_.end())
{
return it->second.get();
}
else
{
createGrid<VType>(1);
return gridRb4d_.at(key).get();
}
}
template <typename VType>
GridCartesian * Environment::getCoarseGrid(const std::vector<int> &blockSize)
{
std::vector<int> s = blockSize;
s.resize(getNd());
CoarseGridKey key = {typeHash<VType>(), s};
auto it = gridCoarse4d_.find(key);
if (it != gridCoarse4d_.end())
{
return it->second.get();
}
else
{
createCoarseGrid<VType>(blockSize, 1);
return gridCoarse4d_.at(key).get();
}
}
template <typename VType>
GridCartesian * Environment::getGrid(const unsigned int Ls)
{
FineGridKey key = {typeHash<VType>(), Ls};
auto it = grid5d_.find(key);
if (it != grid5d_.end())
{
return it->second.get();
}
else
{
createGrid<VType>(Ls);
return grid5d_.at(key).get();
}
}
template <typename VType>
GridRedBlackCartesian * Environment::getRbGrid(const unsigned int Ls)
{
FineGridKey key = {typeHash<VType>(), Ls};
auto it = gridRb5d_.find(key);
if (it != gridRb5d_.end())
{
return it->second.get();
}
else
{
createGrid<VType>(Ls);
return gridRb5d_.at(key).get();
}
}
template <typename VType>
GridCartesian * Environment::getCoarseGrid(const std::vector<int> &blockSize,
const unsigned int Ls)
{
std::vector<int> s = blockSize;
s.push_back(Ls);
CoarseGridKey key = {typeHash<VType>(), s};
auto it = gridCoarse5d_.find(key);
if (it != gridCoarse5d_.end())
{
return it->second.get();
}
else
{
createCoarseGrid<VType>(blockSize, Ls);
return gridCoarse5d_.at(key).get();
}
}
// general memory management ///////////////////////////////////////////////////
template <typename B, typename T, typename ... Ts>
void Environment::createDerivedObject(const std::string name,
const Environment::Storage storage,
const unsigned int Ls,
Ts && ... args)
{
if (!hasObject(name))
{
addObject(name);
}
unsigned int address = getObjectAddress(name);
if (!object_[address].data or !objectsProtected())
{
MemoryStats memStats;
if (!MemoryProfiler::stats)
{
MemoryProfiler::stats = &memStats;
}
size_t initMem = MemoryProfiler::stats->currentlyAllocated;
object_[address].storage = storage;
object_[address].Ls = Ls;
object_[address].data.reset(new Holder<B>(new T(std::forward<Ts>(args)...)));
object_[address].size = MemoryProfiler::stats->maxAllocated - initMem;
object_[address].type = typeIdPt<B>();
object_[address].derivedType = typeIdPt<T>();
if (MemoryProfiler::stats == &memStats)
{
MemoryProfiler::stats = nullptr;
}
}
// object already exists, no error if it is a cache, error otherwise
else if ((object_[address].storage != Storage::cache) or
(object_[address].storage != storage) or
(object_[address].name != name) or
(typeHash(object_[address].type) != typeHash<B>()) or
(typeHash(object_[address].derivedType) != typeHash<T>()))
{
HADRONS_ERROR_REF(ObjectDefinition, "object '" + name + "' already allocated", address);
}
}
template <typename T, typename ... Ts>
void Environment::createObject(const std::string name,
const Environment::Storage storage,
const unsigned int Ls,
Ts && ... args)
{
createDerivedObject<T, T>(name, storage, Ls, std::forward<Ts>(args)...);
}
template <typename B, typename T>
T * Environment::getDerivedObject(const unsigned int address) const
{
if (hasObject(address))
{
if (hasCreatedObject(address))
{
if (auto h = dynamic_cast<Holder<B> *>(object_[address].data.get()))
{
if (&typeid(T) == &typeid(B))
{
return dynamic_cast<T *>(h->getPt());
}
else
{
if (auto hder = dynamic_cast<T *>(h->getPt()))
{
return hder;
}
else
{
HADRONS_ERROR_REF(ObjectType, "object with address " +
std::to_string(address) +
" cannot be casted to '" + typeName(&typeid(T)) +
"' (has type '" + typeName(&typeid(h->get())) + "')", address);
}
}
}
else
{
HADRONS_ERROR_REF(ObjectType, "object with address " +
std::to_string(address) +
" does not have type '" + typeName(&typeid(B)) +
"' (has type '" + getObjectType(address) + "')", address);
}
}
else
{
HADRONS_ERROR_REF(ObjectDefinition, "object with address " +
std::to_string(address) + " is empty", address);
}
}
else
{
HADRONS_ERROR_REF(ObjectDefinition, "no object with address " +
std::to_string(address), address);
}
}
template <typename B, typename T>
T * Environment::getDerivedObject(const std::string name) const
{
return getDerivedObject<B, T>(getObjectAddress(name));
}
template <typename T>
T * Environment::getObject(const unsigned int address) const
{
return getDerivedObject<T, T>(address);
}
template <typename T>
T * Environment::getObject(const std::string name) const
{
return getObject<T>(getObjectAddress(name));
}
template <typename T>
bool Environment::isObjectOfType(const unsigned int address) const
{
if (hasObject(address))
{
if (auto h = dynamic_cast<Holder<T> *>(object_[address].data.get()))
{
return true;
}
else
{
return false;
}
}
else
{
HADRONS_ERROR_REF(ObjectDefinition, "no object with address "
+ std::to_string(address), address);
}
}
template <typename T>
bool Environment::isObjectOfType(const std::string name) const
{
return isObjectOfType<T>(getObjectAddress(name));
}
END_HADRONS_NAMESPACE
#endif // Hadrons_Environment_hpp_

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@ -1,102 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Exceptions.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Exceptions.hpp>
#include <Hadrons/VirtualMachine.hpp>
#include <Hadrons/Module.hpp>
#ifndef ERR_SUFF
#define ERR_SUFF " (" + loc + ")"
#endif
#define CTOR_EXC(name, init) \
name::name(std::string msg, std::string loc)\
:init\
{}
#define CTOR_EXC_REF(name, init) \
name::name(std::string msg, std::string loc, const unsigned int address)\
:init\
{}
using namespace Grid;
using namespace Hadrons;
using namespace Exceptions;
// backtrace cache
std::vector<std::string> Grid::Hadrons::Exceptions::backtraceStr;
// logic errors
CTOR_EXC(Logic, logic_error(msg + ERR_SUFF))
CTOR_EXC(Definition, Logic("definition error: " + msg, loc))
CTOR_EXC(Implementation, Logic("implementation error: " + msg, loc))
CTOR_EXC(Range, Logic("range error: " + msg, loc))
CTOR_EXC(Size, Logic("size error: " + msg, loc))
// runtime errors
CTOR_EXC(Runtime, runtime_error(msg + ERR_SUFF))
CTOR_EXC(Argument, Runtime("argument error: " + msg, loc))
CTOR_EXC(Io, Runtime("IO error: " + msg, loc))
CTOR_EXC(Memory, Runtime("memory error: " + msg, loc))
CTOR_EXC(Parsing, Runtime("parsing error: " + msg, loc))
CTOR_EXC(Program, Runtime("program error: " + msg, loc))
CTOR_EXC(System, Runtime("system error: " + msg, loc))
// virtual machine errors
CTOR_EXC_REF(ObjectDefinition, RuntimeRef("object definition error: " + msg, loc, address));
CTOR_EXC_REF(ObjectType, RuntimeRef("object type error: " + msg, loc, address));
// abort functions
void Grid::Hadrons::Exceptions::abort(const std::exception& e)
{
auto &vm = VirtualMachine::getInstance();
int mod = vm.getCurrentModule();
LOG(Error) << "FATAL ERROR -- Exception " << typeName(&typeid(e))
<< std::endl;
if (mod >= 0)
{
LOG(Error) << "During execution of module '"
<< vm.getModuleName(mod) << "' (address " << mod << ")"
<< std::endl;
}
LOG(Error) << e.what() << std::endl;
if (!backtraceStr.empty())
{
LOG(Error) << "-- BACKTRACE --------------" << std::endl;
for (auto &s: backtraceStr)
{
LOG(Error) << s << std::endl;
}
LOG(Error) << "---------------------------" << std::endl;
}
LOG(Error) << "Aborting program" << std::endl;
Grid_finalize();
exit(EXIT_FAILURE);
}

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@ -1,129 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Exceptions.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_Exceptions_hpp_
#define Hadrons_Exceptions_hpp_
#include <stdexcept>
#include <execinfo.h>
#ifndef Hadrons_Global_hpp_
#include <Hadrons/Global.hpp>
#endif
#define HADRONS_SRC_LOC std::string(__FUNCTION__) + " at " \
+ std::string(__FILE__) + ":" + std::to_string(__LINE__)
#define HADRONS_BACKTRACE_MAX 128
#ifdef HAVE_EXECINFO_H
#define HADRONS_CACHE_BACKTRACE \
{\
void* _callstack[HADRONS_BACKTRACE_MAX];\
int _i, _frames = backtrace(_callstack, HADRONS_BACKTRACE_MAX);\
char** _strs = backtrace_symbols(_callstack, _frames);\
Grid::Hadrons::Exceptions::backtraceStr.clear();\
for (_i = 0; _i < _frames; ++_i)\
{\
Hadrons::Exceptions::backtraceStr.push_back(std::string(_strs[_i]));\
}\
free(_strs);\
}
#else
#define HADRONS_CACHE_BACKTRACE \
Grid::Hadrons::Exceptions::backtraceStr.clear();\
Grid::Hadrons::Exceptions::backtraceStr.push_back("<backtrace not supported>");
#endif
#define HADRONS_ERROR(exc, msg)\
HADRONS_CACHE_BACKTRACE \
throw(Exceptions::exc(msg, HADRONS_SRC_LOC));
#define HADRONS_ERROR_REF(exc, msg, address)\
HADRONS_CACHE_BACKTRACE \
throw(Exceptions::exc(msg, HADRONS_SRC_LOC, address));
#define DECL_EXC(name, base) \
class name: public base\
{\
public:\
name(std::string msg, std::string loc);\
}
#define DECL_EXC_REF(name, base) \
class name: public base\
{\
public:\
name(std::string msg, std::string loc, const unsigned int address);\
}
BEGIN_HADRONS_NAMESPACE
namespace Exceptions
{
// backtrace cache
extern std::vector<std::string> backtraceStr;
// logic errors
DECL_EXC(Logic, std::logic_error);
DECL_EXC(Definition, Logic);
DECL_EXC(Implementation, Logic);
DECL_EXC(Range, Logic);
DECL_EXC(Size, Logic);
// runtime errors
DECL_EXC(Runtime, std::runtime_error);
DECL_EXC(Argument, Runtime);
DECL_EXC(Io, Runtime);
DECL_EXC(Memory, Runtime);
DECL_EXC(Parsing, Runtime);
DECL_EXC(Program, Runtime);
DECL_EXC(System, Runtime);
// virtual machine errors
class RuntimeRef: public Runtime
{
public:
RuntimeRef(std::string msg, std::string loc, const unsigned int address)
: Runtime(msg, loc), address_(address)
{}
unsigned int getAddress(void) const
{
return address_;
}
private:
unsigned int address_;
};
DECL_EXC_REF(ObjectDefinition, RuntimeRef);
DECL_EXC_REF(ObjectType, RuntimeRef);
// abort functions
void abort(const std::exception& e);
}
END_HADRONS_NAMESPACE
#endif // Hadrons_Exceptions_hpp_

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@ -1,214 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Global.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Global.hpp>
using namespace Grid;
using namespace QCD;
using namespace Hadrons;
HadronsLogger Hadrons::HadronsLogError(1,"Error");
HadronsLogger Hadrons::HadronsLogWarning(1,"Warning");
HadronsLogger Hadrons::HadronsLogMessage(1,"Message");
HadronsLogger Hadrons::HadronsLogIterative(1,"Iterative");
HadronsLogger Hadrons::HadronsLogDebug(1,"Debug");
HadronsLogger Hadrons::HadronsLogIRL(1,"IRL");
void Hadrons::initLogger(void)
{
auto w = std::string("Hadrons").length();
int cw = 8;
GridLogError.setTopWidth(w);
GridLogWarning.setTopWidth(w);
GridLogMessage.setTopWidth(w);
GridLogIterative.setTopWidth(w);
GridLogDebug.setTopWidth(w);
GridLogIRL.setTopWidth(w);
GridLogError.setChanWidth(cw);
GridLogWarning.setChanWidth(cw);
GridLogMessage.setChanWidth(cw);
GridLogIterative.setChanWidth(cw);
GridLogDebug.setChanWidth(cw);
GridLogIRL.setChanWidth(cw);
HadronsLogError.Active(true);
HadronsLogWarning.Active(true);
HadronsLogMessage.Active(GridLogMessage.isActive());
HadronsLogIterative.Active(GridLogIterative.isActive());
HadronsLogDebug.Active(GridLogDebug.isActive());
HadronsLogIRL.Active(GridLogIRL.isActive());
HadronsLogError.setChanWidth(cw);
HadronsLogWarning.setChanWidth(cw);
HadronsLogMessage.setChanWidth(cw);
HadronsLogIterative.setChanWidth(cw);
HadronsLogDebug.setChanWidth(cw);
HadronsLogIRL.setChanWidth(cw);
}
// type utilities //////////////////////////////////////////////////////////////
size_t Hadrons::typeHash(const std::type_info *info)
{
return info->hash_code();
}
constexpr unsigned int maxNameSize = 1024u;
std::string Hadrons::typeName(const std::type_info *info)
{
char *buf;
std::string name;
buf = abi::__cxa_demangle(info->name(), nullptr, nullptr, nullptr);
name = buf;
free(buf);
return name;
}
// default writers/readers /////////////////////////////////////////////////////
#ifdef HAVE_HDF5
const std::string Hadrons::resultFileExt = "h5";
#else
const std::string Hadrons::resultFileExt = "xml";
#endif
// recursive mkdir /////////////////////////////////////////////////////////////
int Hadrons::mkdir(const std::string dirName)
{
if (!dirName.empty() and access(dirName.c_str(), R_OK|W_OK|X_OK))
{
mode_t mode755;
char tmp[MAX_PATH_LENGTH];
char *p = NULL;
size_t len;
mode755 = S_IRWXU|S_IRGRP|S_IXGRP|S_IROTH|S_IXOTH;
snprintf(tmp, sizeof(tmp), "%s", dirName.c_str());
len = strlen(tmp);
if(tmp[len - 1] == '/')
{
tmp[len - 1] = 0;
}
for(p = tmp + 1; *p; p++)
{
if(*p == '/')
{
*p = 0;
::mkdir(tmp, mode755);
*p = '/';
}
}
return ::mkdir(tmp, mode755);
}
else
{
return 0;
}
}
std::string Hadrons::basename(const std::string &s)
{
constexpr char sep = '/';
size_t i = s.rfind(sep, s.length());
if (i != std::string::npos)
{
return s.substr(i+1, s.length() - i);
}
else
{
return s;
}
}
std::string Hadrons::dirname(const std::string &s)
{
constexpr char sep = '/';
size_t i = s.rfind(sep, s.length());
if (i != std::string::npos)
{
return s.substr(0, i);
}
else
{
return "";
}
}
void Hadrons::makeFileDir(const std::string filename, GridBase *g)
{
bool doIt = true;
if (g)
{
doIt = g->IsBoss();
}
if (doIt)
{
std::string dir = dirname(filename);
int status = mkdir(dir);
if (status)
{
HADRONS_ERROR(Io, "cannot create directory '" + dir
+ "' ( " + std::strerror(errno) + ")");
}
}
}
void Hadrons::printTimeProfile(const std::map<std::string, GridTime> &timing,
GridTime total)
{
typedef decltype(total.count()) Count;
std::map<Count, std::string, std::greater<Count>> rtiming;
const double dtotal = static_cast<double>(total.count());
auto cf = std::cout.flags();
auto p = std::cout.precision();
unsigned int width = 0;
for (auto &t: timing)
{
width = std::max(width, static_cast<unsigned int>(t.first.length()));
rtiming[t.second.count()] = t.first;
}
for (auto &rt: rtiming)
{
LOG(Message) << std::setw(width) << rt.second << ": "
<< rt.first << " us (" << std::fixed
<< std::setprecision(1)
<< static_cast<double>(rt.first)/dtotal*100 << "%)"
<< std::endl;
}
std::cout.flags(cf);
std::cout.precision(p);
}

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@ -1,283 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Global.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Lanny91 <andrew.lawson@gmail.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_Global_hpp_
#define Hadrons_Global_hpp_
#include <set>
#include <stack>
#include <regex>
#include <Grid/Grid.h>
#include <cxxabi.h>
#ifndef SITE_SIZE_TYPE
#define SITE_SIZE_TYPE size_t
#endif
#ifndef DEFAULT_ASCII_PREC
#define DEFAULT_ASCII_PREC 16
#endif
#define ARG(...) __VA_ARGS__
/* the 'using Grid::operator<<;' statement prevents a very nasty compilation
* error with GCC 5 (clang & GCC 6 compile fine without it).
*/
#define BEGIN_HADRONS_NAMESPACE \
namespace Grid {\
using namespace QCD;\
namespace Hadrons {\
using Grid::operator<<;\
using Grid::operator>>;
#define END_HADRONS_NAMESPACE }}
#define BEGIN_MODULE_NAMESPACE(name)\
namespace name {\
using Grid::operator<<;\
using Grid::operator>>;
#define END_MODULE_NAMESPACE }
#define _HADRONS_IMPL(impl, sub) impl##sub
#define HADRONS_IMPL(impl, sub) _HADRONS_IMPL(impl, sub)
#ifndef FIMPLBASE
#define FIMPLBASE WilsonImpl
#endif
#define FIMPL HADRONS_IMPL(FIMPLBASE, R)
#define FIMPLF HADRONS_IMPL(FIMPLBASE, F)
#define FIMPLD HADRONS_IMPL(FIMPLBASE, D)
#ifndef ZFIMPLBASE
#define ZFIMPLBASE ZWilsonImpl
#endif
#define ZFIMPL HADRONS_IMPL(ZFIMPLBASE, R)
#define ZFIMPLF HADRONS_IMPL(ZFIMPLBASE, F)
#define ZFIMPLD HADRONS_IMPL(ZFIMPLBASE, D)
#ifndef SIMPLBASE
#define SIMPLBASE ScalarImplC
#endif
#define SIMPL HADRONS_IMPL(SIMPLBASE, R)
#define SIMPLF HADRONS_IMPL(SIMPLBASE, F)
#define SIMPLD HADRONS_IMPL(SIMPLBASE, D)
#ifndef GIMPLBASE
#define GIMPLBASE PeriodicGimpl
#endif
#define GIMPL HADRONS_IMPL(GIMPLBASE, R)
#define GIMPLF HADRONS_IMPL(GIMPLBASE, F)
#define GIMPLD HADRONS_IMPL(GIMPLBASE, D)
BEGIN_HADRONS_NAMESPACE
// type aliases
#define BASIC_TYPE_ALIASES(Impl, suffix)\
typedef typename Impl::Field ScalarField##suffix;\
typedef typename Impl::PropagatorField PropagatorField##suffix;\
typedef typename Impl::SitePropagator::scalar_object SitePropagator##suffix;\
typedef typename Impl::ComplexField ComplexField##suffix;\
typedef std::vector<SitePropagator##suffix> SlicedPropagator##suffix;\
typedef std::vector<typename ComplexField##suffix::vector_object::scalar_object> SlicedComplex##suffix;
#define FERM_TYPE_ALIASES(FImpl, suffix)\
BASIC_TYPE_ALIASES(FImpl, suffix);\
typedef FermionOperator<FImpl> FMat##suffix;\
typedef typename FImpl::FermionField FermionField##suffix;\
typedef typename FImpl::GaugeField GaugeField##suffix;\
typedef typename FImpl::DoubledGaugeField DoubledGaugeField##suffix;\
typedef Lattice<iSpinMatrix<typename FImpl::Simd>> SpinMatrixField##suffix;
#define GAUGE_TYPE_ALIASES(GImpl, suffix)\
typedef typename GImpl::GaugeField GaugeField##suffix;
#define SOLVER_TYPE_ALIASES(FImpl, suffix)\
typedef Solver<FImpl> Solver##suffix;
#define SINK_TYPE_ALIASES(suffix)\
typedef std::function<SlicedPropagator##suffix\
(const PropagatorField##suffix &)> SinkFn##suffix;
// logger
class HadronsLogger: public Logger
{
public:
HadronsLogger(int on, std::string nm): Logger("Hadrons", on, nm,
GridLogColours, "BLACK"){};
};
#define LOG(channel) std::cout << HadronsLog##channel
#define HADRONS_DEBUG_VAR(var) LOG(Debug) << #var << "= " << (var) << std::endl;
extern HadronsLogger HadronsLogError;
extern HadronsLogger HadronsLogWarning;
extern HadronsLogger HadronsLogMessage;
extern HadronsLogger HadronsLogIterative;
extern HadronsLogger HadronsLogDebug;
extern HadronsLogger HadronsLogIRL;
void initLogger(void);
// singleton pattern
#define SINGLETON(name)\
public:\
name(const name &e) = delete;\
void operator=(const name &e) = delete;\
static name & getInstance(void)\
{\
static name e;\
return e;\
}\
private:\
name(void);
#define SINGLETON_DEFCTOR(name)\
public:\
name(const name &e) = delete;\
void operator=(const name &e) = delete;\
static name & getInstance(void)\
{\
static name e;\
return e;\
}\
private:\
name(void) = default;
// type utilities
template <typename T>
const std::type_info * typeIdPt(const T &x)
{
return &typeid(x);
}
template <typename T>
const std::type_info * typeIdPt(void)
{
return &typeid(T);
}
size_t typeHash(const std::type_info *info);
template <typename T>
size_t typeHash(const T &x)
{
return typeHash(typeIdPt(x));
}
template <typename T>
size_t typeHash(void)
{
return typeHash(typeIdPt<T>());
}
std::string typeName(const std::type_info *info);
template <typename T>
std::string typeName(const T &x)
{
return typeName(typeIdPt(x));
}
template <typename T>
std::string typeName(void)
{
return typeName(typeIdPt<T>());
}
// default writers/readers
extern const std::string resultFileExt;
#ifdef HAVE_HDF5
typedef Hdf5Reader ResultReader;
typedef Hdf5Writer ResultWriter;
#else
typedef XmlReader ResultReader;
typedef XmlWriter ResultWriter;
#endif
#define RESULT_FILE_NAME(name, traj) \
name + "." + std::to_string(traj) + "." + resultFileExt
// recursive mkdir
#define MAX_PATH_LENGTH 512u
int mkdir(const std::string dirName);
std::string basename(const std::string &s);
std::string dirname(const std::string &s);
void makeFileDir(const std::string filename, GridBase *g = nullptr);
// default Schur convention
#ifndef HADRONS_DEFAULT_SCHUR
#define HADRONS_DEFAULT_SCHUR DiagTwo
#endif
#define _HADRONS_SCHUR_OP_(conv) Schur##conv##Operator
#define HADRONS_SCHUR_OP(conv) _HADRONS_SCHUR_OP_(conv)
#define HADRONS_DEFAULT_SCHUR_OP HADRONS_SCHUR_OP(HADRONS_DEFAULT_SCHUR)
#define _HADRONS_SCHUR_SOLVE_(conv) SchurRedBlack##conv##Solve
#define HADRONS_SCHUR_SOLVE(conv) _HADRONS_SCHUR_SOLVE_(conv)
#define HADRONS_DEFAULT_SCHUR_SOLVE HADRONS_SCHUR_SOLVE(HADRONS_DEFAULT_SCHUR)
#define _HADRONS_SCHUR_A2A_(conv) A2AVectorsSchur##conv
#define HADRONS_SCHUR_A2A(conv) _HADRONS_SCHUR_A2A_(conv)
#define HADRONS_DEFAULT_SCHUR_A2A HADRONS_SCHUR_A2A(HADRONS_DEFAULT_SCHUR)
// stringify macro
#define _HADRONS_STR(x) #x
#define HADRONS_STR(x) _HADRONS_STR(x)
// pretty print time profile
void printTimeProfile(const std::map<std::string, GridTime> &timing, GridTime total);
// token replacement utility
template <typename T>
void tokenReplace(std::string &str, const std::string token,
const T &x, const std::string mark = "@")
{
std::string fullToken = mark + token + mark;
auto pos = str.find(fullToken);
if (pos != std::string::npos)
{
str.replace(pos, fullToken.size(), std::to_string(x));
}
}
// generic correlator class
template <typename Metadata, typename Scalar = Complex>
struct Correlator: Serializable
{
GRID_SERIALIZABLE_CLASS_MEMBERS(ARG(Correlator<Metadata, Scalar>),
Metadata, info,
std::vector<Complex>, corr);
};
END_HADRONS_NAMESPACE
#include <Hadrons/Exceptions.hpp>
#endif // Hadrons_Global_hpp_

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@ -1,71 +0,0 @@
#include <Hadrons/Modules/MSource/Gauss.hpp>
#include <Hadrons/Modules/MSource/Momentum.hpp>
#include <Hadrons/Modules/MSource/SeqAslash.hpp>
#include <Hadrons/Modules/MSource/Z2.hpp>
#include <Hadrons/Modules/MSource/Point.hpp>
#include <Hadrons/Modules/MSource/SeqGamma.hpp>
#include <Hadrons/Modules/MSource/Convolution.hpp>
#include <Hadrons/Modules/MSource/Wall.hpp>
#include <Hadrons/Modules/MSource/SeqConserved.hpp>
#include <Hadrons/Modules/MScalarSUN/Div.hpp>
#include <Hadrons/Modules/MScalarSUN/TrKinetic.hpp>
#include <Hadrons/Modules/MScalarSUN/TrPhi.hpp>
#include <Hadrons/Modules/MScalarSUN/TwoPoint.hpp>
#include <Hadrons/Modules/MScalarSUN/Grad.hpp>
#include <Hadrons/Modules/MScalarSUN/Utils.hpp>
#include <Hadrons/Modules/MScalarSUN/StochFreeField.hpp>
#include <Hadrons/Modules/MScalarSUN/EMT.hpp>
#include <Hadrons/Modules/MScalarSUN/TrMag.hpp>
#include <Hadrons/Modules/MScalarSUN/TwoPointNPR.hpp>
#include <Hadrons/Modules/MScalarSUN/TransProj.hpp>
#include <Hadrons/Modules/MNoise/TimeDilutedSpinColorDiagonal.hpp>
#include <Hadrons/Modules/MNoise/FullVolumeSpinColorDiagonal.hpp>
#include <Hadrons/Modules/MScalar/FreeProp.hpp>
#include <Hadrons/Modules/MScalar/Scalar.hpp>
#include <Hadrons/Modules/MScalar/ChargedProp.hpp>
#include <Hadrons/Modules/MAction/Wilson.hpp>
#include <Hadrons/Modules/MAction/ScaledDWF.hpp>
#include <Hadrons/Modules/MAction/MobiusDWF.hpp>
#include <Hadrons/Modules/MAction/WilsonClover.hpp>
#include <Hadrons/Modules/MAction/ZMobiusDWF.hpp>
#include <Hadrons/Modules/MAction/DWF.hpp>
#include <Hadrons/Modules/MGauge/UnitEm.hpp>
#include <Hadrons/Modules/MGauge/Electrify.hpp>
#include <Hadrons/Modules/MGauge/StoutSmearing.hpp>
#include <Hadrons/Modules/MGauge/Random.hpp>
#include <Hadrons/Modules/MGauge/FundtoHirep.hpp>
#include <Hadrons/Modules/MGauge/GaugeFix.hpp>
#include <Hadrons/Modules/MGauge/Unit.hpp>
#include <Hadrons/Modules/MGauge/StochEm.hpp>
#include <Hadrons/Modules/MUtilities/RandomVectors.hpp>
#include <Hadrons/Modules/MUtilities/PrecisionCast.hpp>
#include <Hadrons/Modules/MIO/LoadCosmHol.hpp>
#include <Hadrons/Modules/MIO/LoadA2AVectors.hpp>
#include <Hadrons/Modules/MIO/LoadEigenPack.hpp>
#include <Hadrons/Modules/MIO/LoadNersc.hpp>
#include <Hadrons/Modules/MIO/LoadBinary.hpp>
#include <Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp>
#include <Hadrons/Modules/MContraction/WeakEye3pt.hpp>
#include <Hadrons/Modules/MContraction/WeakMesonDecayKl2.hpp>
#include <Hadrons/Modules/MContraction/Gamma3pt.hpp>
#include <Hadrons/Modules/MContraction/A2AMesonField.hpp>
#include <Hadrons/Modules/MContraction/A2ALoop.hpp>
#include <Hadrons/Modules/MContraction/WeakNonEye3pt.hpp>
#include <Hadrons/Modules/MContraction/DiscLoop.hpp>
#include <Hadrons/Modules/MContraction/A2AAslashField.hpp>
#include <Hadrons/Modules/MContraction/Baryon.hpp>
#include <Hadrons/Modules/MContraction/Meson.hpp>
#include <Hadrons/Modules/MNPR/FourQuark.hpp>
#include <Hadrons/Modules/MNPR/Bilinear.hpp>
#include <Hadrons/Modules/MNPR/Amputate.hpp>
#include <Hadrons/Modules/MSolver/A2AAslashVectors.hpp>
#include <Hadrons/Modules/MSolver/RBPrecCG.hpp>
#include <Hadrons/Modules/MSolver/Guesser.hpp>
#include <Hadrons/Modules/MSolver/LocalCoherenceLanczos.hpp>
#include <Hadrons/Modules/MSolver/A2AVectors.hpp>
#include <Hadrons/Modules/MSolver/MixedPrecisionRBPrecCG.hpp>
#include <Hadrons/Modules/MFermion/FreeProp.hpp>
#include <Hadrons/Modules/MFermion/GaugeProp.hpp>
#include <Hadrons/Modules/MFermion/EMLepton.hpp>
#include <Hadrons/Modules/MSink/Smear.hpp>
#include <Hadrons/Modules/MSink/Point.hpp>

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/DWF.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/DWF.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TDWF<FIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TDWF<FIMPLF>;
#endif

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/MobiusDWF.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/MobiusDWF.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TMobiusDWF<FIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TMobiusDWF<FIMPLF>;
#endif

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@ -1,156 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/MobiusDWF.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MAction_MobiusDWF_hpp_
#define Hadrons_MAction_MobiusDWF_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Mobius domain-wall fermion action *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MAction)
class MobiusDWFPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(MobiusDWFPar,
std::string , gauge,
unsigned int, Ls,
double , mass,
double , M5,
double , b,
double , c,
std::string , boundary,
std::string , twist);
};
template <typename FImpl>
class TMobiusDWF: public Module<MobiusDWFPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
// constructor
TMobiusDWF(const std::string name);
// destructor
virtual ~TMobiusDWF(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(MobiusDWF, TMobiusDWF<FIMPL>, MAction);
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
MODULE_REGISTER_TMP(MobiusDWFF, TMobiusDWF<FIMPLF>, MAction);
#endif
/******************************************************************************
* TMobiusDWF implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TMobiusDWF<FImpl>::TMobiusDWF(const std::string name)
: Module<MobiusDWFPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TMobiusDWF<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge};
return in;
}
template <typename FImpl>
std::vector<std::string> TMobiusDWF<FImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TMobiusDWF<FImpl>::setup(void)
{
LOG(Message) << "Setting up Mobius domain wall fermion matrix with m= "
<< par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls
<< ", b= " << par().b << ", c= " << par().c
<< " using gauge field '" << par().gauge << "'"
<< std::endl;
auto &U = envGet(GaugeField, par().gauge);
auto &g4 = *envGetGrid(FermionField);
auto &grb4 = *envGetRbGrid(FermionField);
auto &g5 = *envGetGrid(FermionField, par().Ls);
auto &grb5 = *envGetRbGrid(FermionField, par().Ls);
typename MobiusFermion<FImpl>::ImplParams implParams;
if (!par().boundary.empty())
{
implParams.boundary_phases = strToVec<Complex>(par().boundary);
}
if (!par().twist.empty())
{
implParams.twist_n_2pi_L = strToVec<Real>(par().twist);
}
LOG(Message) << "Fermion boundary conditions: " << implParams.boundary_phases
<< std::endl;
LOG(Message) << "Twists: " << implParams.twist_n_2pi_L
<< std::endl;
if (implParams.boundary_phases.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of boundary phase");
}
if (implParams.twist_n_2pi_L.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of twist");
}
envCreateDerived(FMat, MobiusFermion<FImpl>, getName(), par().Ls, U, g5,
grb5, g4, grb4, par().mass, par().M5, par().b, par().c,
implParams);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TMobiusDWF<FImpl>::execute(void)
{}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MAction_MobiusDWF_hpp_

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/ScaledDWF.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/ScaledDWF.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TScaledDWF<FIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TScaledDWF<FIMPLF>;
#endif

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@ -1,155 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/ScaledDWF.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MAction_ScaledDWF_hpp_
#define Hadrons_MAction_ScaledDWF_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Scaled domain wall fermion *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MAction)
class ScaledDWFPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(ScaledDWFPar,
std::string , gauge,
unsigned int, Ls,
double , mass,
double , M5,
double , scale,
std::string , boundary,
std::string , twist);
};
template <typename FImpl>
class TScaledDWF: public Module<ScaledDWFPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
// constructor
TScaledDWF(const std::string name);
// destructor
virtual ~TScaledDWF(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(ScaledDWF, TScaledDWF<FIMPL>, MAction);
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
MODULE_REGISTER_TMP(ScaledDWFF, TScaledDWF<FIMPLF>, MAction);
#endif
/******************************************************************************
* TScaledDWF implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TScaledDWF<FImpl>::TScaledDWF(const std::string name)
: Module<ScaledDWFPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TScaledDWF<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge};
return in;
}
template <typename FImpl>
std::vector<std::string> TScaledDWF<FImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TScaledDWF<FImpl>::setup(void)
{
LOG(Message) << "Setting up scaled domain wall fermion matrix with m= "
<< par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls
<< ", scale= " << par().scale
<< " using gauge field '" << par().gauge << "'"
<< std::endl;
auto &U = envGet(GaugeField, par().gauge);
auto &g4 = *envGetGrid(FermionField);
auto &grb4 = *envGetRbGrid(FermionField);
auto &g5 = *envGetGrid(FermionField, par().Ls);
auto &grb5 = *envGetRbGrid(FermionField, par().Ls);
typename ScaledShamirFermion<FImpl>::ImplParams implParams;
if (!par().boundary.empty())
{
implParams.boundary_phases = strToVec<Complex>(par().boundary);
}
if (!par().twist.empty())
{
implParams.twist_n_2pi_L = strToVec<Real>(par().twist);
}
LOG(Message) << "Fermion boundary conditions: " << implParams.boundary_phases
<< std::endl;
LOG(Message) << "Twists: " << implParams.twist_n_2pi_L
<< std::endl;
if (implParams.boundary_phases.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of boundary phase");
}
if (implParams.twist_n_2pi_L.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of twist");
}
envCreateDerived(FMat, ScaledShamirFermion<FImpl>, getName(), par().Ls, U, g5,
grb5, g4, grb4, par().mass, par().M5, par().scale,
implParams);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TScaledDWF<FImpl>::execute(void)
{}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MAction_ScaledDWF_hpp_

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/Wilson.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/Wilson.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TWilson<FIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TWilson<FIMPLF>;
#endif

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/WilsonClover.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/WilsonClover.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TWilsonClover<FIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TWilsonClover<FIMPLF>;
#endif

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/ZMobiusDWF.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MAction/ZMobiusDWF.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MAction;
template class Grid::Hadrons::MAction::TZMobiusDWF<ZFIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MAction::TZMobiusDWF<ZFIMPLF>;
#endif

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@ -1,163 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MAction/ZMobiusDWF.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MAction_ZMobiusDWF_hpp_
#define Hadrons_MAction_ZMobiusDWF_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* z-Mobius domain-wall fermion action *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MAction)
class ZMobiusDWFPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(ZMobiusDWFPar,
std::string , gauge,
unsigned int , Ls,
double , mass,
double , M5,
double , b,
double , c,
std::vector<std::complex<double>>, omega,
std::string , boundary,
std::string , twist);
};
template <typename FImpl>
class TZMobiusDWF: public Module<ZMobiusDWFPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
// constructor
TZMobiusDWF(const std::string name);
// destructor
virtual ~TZMobiusDWF(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(ZMobiusDWF, TZMobiusDWF<ZFIMPL>, MAction);
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
MODULE_REGISTER_TMP(ZMobiusDWFF, TZMobiusDWF<ZFIMPLF>, MAction);
#endif
/******************************************************************************
* TZMobiusDWF implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TZMobiusDWF<FImpl>::TZMobiusDWF(const std::string name)
: Module<ZMobiusDWFPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TZMobiusDWF<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge};
return in;
}
template <typename FImpl>
std::vector<std::string> TZMobiusDWF<FImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TZMobiusDWF<FImpl>::setup(void)
{
LOG(Message) << "Setting up z-Mobius domain wall fermion matrix with m= "
<< par().mass << ", M5= " << par().M5 << ", Ls= " << par().Ls
<< ", b= " << par().b << ", c= " << par().c
<< " using gauge field '" << par().gauge << "'"
<< std::endl;
LOG(Message) << "Omegas: " << std::endl;
for (unsigned int i = 0; i < par().omega.size(); ++i)
{
LOG(Message) << " omega[" << i << "]= " << par().omega[i] << std::endl;
}
auto &U = envGet(GaugeField, par().gauge);
auto &g4 = *envGetGrid(FermionField);
auto &grb4 = *envGetRbGrid(FermionField);
auto &g5 = *envGetGrid(FermionField, par().Ls);
auto &grb5 = *envGetRbGrid(FermionField, par().Ls);
auto omega = par().omega;
typename ZMobiusFermion<FImpl>::ImplParams implParams;
if (!par().boundary.empty())
{
implParams.boundary_phases = strToVec<Complex>(par().boundary);
}
if (!par().twist.empty())
{
implParams.twist_n_2pi_L = strToVec<Real>(par().twist);
}
LOG(Message) << "Fermion boundary conditions: " << implParams.boundary_phases
<< std::endl;
LOG(Message) << "Twists: " << implParams.twist_n_2pi_L
<< std::endl;
if (implParams.boundary_phases.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of boundary phase");
}
if (implParams.twist_n_2pi_L.size() != env().getNd())
{
HADRONS_ERROR(Size, "Wrong number of twist");
}
envCreateDerived(FMat, ZMobiusFermion<FImpl>, getName(), par().Ls, U, g5,
grb5, g4, grb4, par().mass, par().M5, omega,
par().b, par().c, implParams);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TZMobiusDWF<FImpl>::execute(void)
{}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MAction_ZMobiusDWF_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/A2AAslashField.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/A2AAslashField.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TA2AAslashField<FIMPL, PhotonR>;

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@ -1,246 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/A2AAslashField.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MContraction_A2AAslashField_hpp_
#define Hadrons_MContraction_A2AAslashField_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/A2AMatrix.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* A2AAslashField *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MContraction)
class A2AAslashFieldPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(A2AAslashFieldPar,
int, cacheBlock,
int, block,
std::string, left,
std::string, right,
std::string, output,
std::vector<std::string>, emField);
};
class A2AAslashFieldMetadata: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(A2AAslashFieldMetadata,
std::string, emFieldName);
};
template <typename T, typename FImpl>
class AslashFieldKernel: public A2AKernel<T, typename FImpl::FermionField>
{
public:
typedef typename FImpl::FermionField FermionField;
public:
AslashFieldKernel(const std::vector<LatticeComplex> &emB0,
const std::vector<LatticeComplex> &emB1,
GridBase *grid)
: emB0_(emB0), emB1_(emB1), grid_(grid)
{
vol_ = 1.;
for (auto &d: grid_->GlobalDimensions())
{
vol_ *= d;
}
}
virtual ~AslashFieldKernel(void) = default;
virtual void operator()(A2AMatrixSet<T> &m, const FermionField *left,
const FermionField *right,
const unsigned int orthogDim, double &t)
{
A2Autils<FImpl>::AslashField(m, left, right, emB0_, emB1_, orthogDim, &t);
}
virtual double flops(const unsigned int blockSizei, const unsigned int blockSizej)
{
return 0.;
}
virtual double bytes(const unsigned int blockSizei, const unsigned int blockSizej)
{
return 0.;
}
private:
const std::vector<LatticeComplex> &emB0_, &emB1_;
GridBase *grid_;
double vol_;
};
template <typename FImpl, typename PhotonImpl>
class TA2AAslashField: public Module<A2AAslashFieldPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
typedef typename PhotonImpl::GaugeField EmField;
typedef A2AMatrixBlockComputation<Complex,
FermionField,
A2AAslashFieldMetadata,
HADRONS_A2AM_IO_TYPE> Computation;
typedef AslashFieldKernel<Complex, FImpl> Kernel;
public:
// constructor
TA2AAslashField(const std::string name);
// destructor
virtual ~TA2AAslashField(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(A2AAslashField, ARG(TA2AAslashField<FIMPL, PhotonR>), MContraction);
/******************************************************************************
* TA2AAslashField implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl, typename PhotonImpl>
TA2AAslashField<FImpl, PhotonImpl>::TA2AAslashField(const std::string name)
: Module<A2AAslashFieldPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl, typename PhotonImpl>
std::vector<std::string> TA2AAslashField<FImpl, PhotonImpl>::getInput(void)
{
std::vector<std::string> in = par().emField;
in.push_back(par().left);
in.push_back(par().right);
return in;
}
template <typename FImpl, typename PhotonImpl>
std::vector<std::string> TA2AAslashField<FImpl, PhotonImpl>::getOutput(void)
{
std::vector<std::string> out = {};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl, typename PhotonImpl>
void TA2AAslashField<FImpl, PhotonImpl>::setup(void)
{
envTmp(Computation, "computation", 1, envGetGrid(FermionField),
env().getNd() - 1, par().emField.size(), 1, par().block,
par().cacheBlock, this);
envTmp(std::vector<ComplexField>, "B0", 1,
par().emField.size(), envGetGrid(ComplexField));
envTmp(std::vector<ComplexField>, "B1", 1,
par().emField.size(), envGetGrid(ComplexField));
envTmpLat(ComplexField, "Amu");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl, typename PhotonImpl>
void TA2AAslashField<FImpl, PhotonImpl>::execute(void)
{
auto &left = envGet(std::vector<FermionField>, par().left);
auto &right = envGet(std::vector<FermionField>, par().right);
int nt = env().getDim().back();
int N_i = left.size();
int N_j = right.size();
int nem = par().emField.size();
int block = par().block;
int cacheBlock = par().cacheBlock;
LOG(Message) << "Computing all-to-all A-slash fields" << std::endl;
LOG(Message) << "Left: '" << par().left << "' Right: '" << par().right << "'" << std::endl;
LOG(Message) << "EM fields:" << std::endl;
for (auto &name: par().emField)
{
LOG(Message) << " " << name << std::endl;
}
LOG(Message) << "A-slash field size: " << nt << "*" << N_i << "*" << N_j
<< " (filesize " << sizeString(nt*N_i*N_j*sizeof(HADRONS_A2AM_IO_TYPE))
<< "/EM field)" << std::endl;
// preparing "B" complexified fields
startTimer("Complexify EM fields");
envGetTmp(std::vector<ComplexField>, B0);
envGetTmp(std::vector<ComplexField>, B1);
for (unsigned int i = 0; i < par().emField.size(); ++i)
{
auto &A = envGet(EmField, par().emField[i]);
envGetTmp(ComplexField, Amu);
B0[i] = peekLorentz(A, 0);
B0[i] += timesI(peekLorentz(A, 1));
B1[i] = peekLorentz(A, 2);
B1[i] += timesI(peekLorentz(A, 3));
}
stopTimer("Complexify EM fields");
// I/O name & metadata lambdas
auto ionameFn = [this](const unsigned int em, const unsigned int dummy)
{
return par().emField[em];
};
auto filenameFn = [this, &ionameFn](const unsigned int em, const unsigned int dummy)
{
return par().output + "." + std::to_string(vm().getTrajectory())
+ "/" + ionameFn(em, dummy) + ".h5";
};
auto metadataFn = [this](const unsigned int em, const unsigned int dummy)
{
A2AAslashFieldMetadata md;
md.emFieldName = par().emField[em];
return md;
};
// executing computation
Kernel kernel(B0, B1, envGetGrid(FermionField));
envGetTmp(Computation, computation);
computation.execute(left, right, kernel, ionameFn, filenameFn, metadataFn);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MContraction_A2AAslashField_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/A2ALoop.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/A2ALoop.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TA2ALoop<FIMPL>;

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/A2AMesonField.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: paboyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/A2AMesonField.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TA2AMesonField<FIMPL>;

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@ -1,315 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/A2AMesonField.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
Author: paboyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MContraction_A2AMesonField_hpp_
#define Hadrons_MContraction_A2AMesonField_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/A2AMatrix.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* All-to-all meson field creation *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MContraction)
class A2AMesonFieldPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(A2AMesonFieldPar,
int, cacheBlock,
int, block,
std::string, left,
std::string, right,
std::string, output,
std::string, gammas,
std::vector<std::string>, mom);
};
class A2AMesonFieldMetadata: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(A2AMesonFieldMetadata,
std::vector<RealF>, momentum,
Gamma::Algebra, gamma);
};
template <typename T, typename FImpl>
class MesonFieldKernel: public A2AKernel<T, typename FImpl::FermionField>
{
public:
typedef typename FImpl::FermionField FermionField;
public:
MesonFieldKernel(const std::vector<Gamma::Algebra> &gamma,
const std::vector<LatticeComplex> &mom,
GridBase *grid)
: gamma_(gamma), mom_(mom), grid_(grid)
{
vol_ = 1.;
for (auto &d: grid_->GlobalDimensions())
{
vol_ *= d;
}
}
virtual ~MesonFieldKernel(void) = default;
virtual void operator()(A2AMatrixSet<T> &m, const FermionField *left,
const FermionField *right,
const unsigned int orthogDim, double &t)
{
A2Autils<FImpl>::MesonField(m, left, right, gamma_, mom_, orthogDim, &t);
}
virtual double flops(const unsigned int blockSizei, const unsigned int blockSizej)
{
return vol_*(2*8.0+6.0+8.0*mom_.size())*blockSizei*blockSizej*gamma_.size();
}
virtual double bytes(const unsigned int blockSizei, const unsigned int blockSizej)
{
return vol_*(12.0*sizeof(T))*blockSizei*blockSizej
+ vol_*(2.0*sizeof(T)*mom_.size())*blockSizei*blockSizej*gamma_.size();
}
private:
const std::vector<Gamma::Algebra> &gamma_;
const std::vector<LatticeComplex> &mom_;
GridBase *grid_;
double vol_;
};
template <typename FImpl>
class TA2AMesonField : public Module<A2AMesonFieldPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
typedef A2AMatrixBlockComputation<Complex,
FermionField,
A2AMesonFieldMetadata,
HADRONS_A2AM_IO_TYPE> Computation;
typedef MesonFieldKernel<Complex, FImpl> Kernel;
public:
// constructor
TA2AMesonField(const std::string name);
// destructor
virtual ~TA2AMesonField(void){};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
private:
bool hasPhase_{false};
std::string momphName_;
std::vector<Gamma::Algebra> gamma_;
std::vector<std::vector<Real>> mom_;
};
MODULE_REGISTER(A2AMesonField, ARG(TA2AMesonField<FIMPL>), MContraction);
/******************************************************************************
* TA2AMesonField implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TA2AMesonField<FImpl>::TA2AMesonField(const std::string name)
: Module<A2AMesonFieldPar>(name)
, momphName_(name + "_momph")
{
}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TA2AMesonField<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().left, par().right};
return in;
}
template <typename FImpl>
std::vector<std::string> TA2AMesonField<FImpl>::getOutput(void)
{
std::vector<std::string> out = {};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TA2AMesonField<FImpl>::setup(void)
{
gamma_.clear();
mom_.clear();
if (par().gammas == "all")
{
gamma_ = {
Gamma::Algebra::Gamma5,
Gamma::Algebra::Identity,
Gamma::Algebra::GammaX,
Gamma::Algebra::GammaY,
Gamma::Algebra::GammaZ,
Gamma::Algebra::GammaT,
Gamma::Algebra::GammaXGamma5,
Gamma::Algebra::GammaYGamma5,
Gamma::Algebra::GammaZGamma5,
Gamma::Algebra::GammaTGamma5,
Gamma::Algebra::SigmaXY,
Gamma::Algebra::SigmaXZ,
Gamma::Algebra::SigmaXT,
Gamma::Algebra::SigmaYZ,
Gamma::Algebra::SigmaYT,
Gamma::Algebra::SigmaZT
};
}
else
{
gamma_ = strToVec<Gamma::Algebra>(par().gammas);
}
for (auto &pstr: par().mom)
{
auto p = strToVec<Real>(pstr);
if (p.size() != env().getNd() - 1)
{
HADRONS_ERROR(Size, "Momentum has " + std::to_string(p.size())
+ " components instead of "
+ std::to_string(env().getNd() - 1));
}
mom_.push_back(p);
}
envCache(std::vector<ComplexField>, momphName_, 1,
par().mom.size(), envGetGrid(ComplexField));
envTmpLat(ComplexField, "coor");
envTmp(Computation, "computation", 1, envGetGrid(FermionField),
env().getNd() - 1, mom_.size(), gamma_.size(), par().block,
par().cacheBlock, this);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TA2AMesonField<FImpl>::execute(void)
{
auto &left = envGet(std::vector<FermionField>, par().left);
auto &right = envGet(std::vector<FermionField>, par().right);
int nt = env().getDim().back();
int N_i = left.size();
int N_j = right.size();
int ngamma = gamma_.size();
int nmom = mom_.size();
int block = par().block;
int cacheBlock = par().cacheBlock;
LOG(Message) << "Computing all-to-all meson fields" << std::endl;
LOG(Message) << "Left: '" << par().left << "' Right: '" << par().right << "'" << std::endl;
LOG(Message) << "Momenta:" << std::endl;
for (auto &p: mom_)
{
LOG(Message) << " " << p << std::endl;
}
LOG(Message) << "Spin bilinears:" << std::endl;
for (auto &g: gamma_)
{
LOG(Message) << " " << g << std::endl;
}
LOG(Message) << "Meson field size: " << nt << "*" << N_i << "*" << N_j
<< " (filesize " << sizeString(nt*N_i*N_j*sizeof(HADRONS_A2AM_IO_TYPE))
<< "/momentum/bilinear)" << std::endl;
auto &ph = envGet(std::vector<ComplexField>, momphName_);
if (!hasPhase_)
{
startTimer("Momentum phases");
for (unsigned int j = 0; j < nmom; ++j)
{
Complex i(0.0,1.0);
std::vector<Real> p;
envGetTmp(ComplexField, coor);
ph[j] = zero;
for(unsigned int mu = 0; mu < mom_[j].size(); mu++)
{
LatticeCoordinate(coor, mu);
ph[j] = ph[j] + (mom_[j][mu]/env().getDim(mu))*coor;
}
ph[j] = exp((Real)(2*M_PI)*i*ph[j]);
}
hasPhase_ = true;
stopTimer("Momentum phases");
}
auto ionameFn = [this](const unsigned int m, const unsigned int g)
{
std::stringstream ss;
ss << gamma_[g] << "_";
for (unsigned int mu = 0; mu < mom_[m].size(); ++mu)
{
ss << mom_[m][mu] << ((mu == mom_[m].size() - 1) ? "" : "_");
}
return ss.str();
};
auto filenameFn = [this, &ionameFn](const unsigned int m, const unsigned int g)
{
return par().output + "." + std::to_string(vm().getTrajectory())
+ "/" + ionameFn(m, g) + ".h5";
};
auto metadataFn = [this](const unsigned int m, const unsigned int g)
{
A2AMesonFieldMetadata md;
for (auto pmu: mom_[m])
{
md.momentum.push_back(pmu);
}
md.gamma = gamma_[g];
return md;
};
Kernel kernel(gamma_, ph, envGetGrid(FermionField));
envGetTmp(Computation, computation);
computation.execute(left, right, kernel, ionameFn, filenameFn, metadataFn);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MContraction_A2AMesonField_hpp_

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/Baryon.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/Baryon.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TBaryon<FIMPL,FIMPL,FIMPL>;

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/DiscLoop.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/DiscLoop.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TDiscLoop<FIMPL>;

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/Meson.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/Meson.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TMeson<FIMPL,FIMPL>;

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakEye3pt.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/WeakEye3pt.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TWeakEye3pt<FIMPL>;

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@ -1,200 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakEye3pt.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Lanny91 <andrew.lawson@gmail.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MContraction_WeakEye3pt_hpp_
#define Hadrons_MContraction_WeakEye3pt_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/*
* Weak Hamiltonian meson 3-pt diagrams, eye topologies.
*
* Schematics: loop |
* /-<-¬ |
* / \ | qbl G qbr
* \ / | /----<------*------<----¬
* qbl \ / qbr | / /-*-¬ \
* /-----<-----* *-----<----¬ | / / G \ \
* gIn * G G * gOut | gIn * \ / loop * gOut
* \ / | \ \->-/ /
* \ / | \ /
* \---------->---------/ | \----------->----------/
* qs | qs
* |
* one trace | two traces
*
* one trace : tr(qbr*gOut*qs*adj(gIn)*g5*adj(qbl)*g5*G*loop*G)
* two traces: tr(qbr*gOut*qs*adj(gIn)*g5*adj(qbl)*g5*G)*tr(loop*G)
*
*/
BEGIN_MODULE_NAMESPACE(MContraction)
class WeakEye3ptPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(WeakEye3ptPar,
std::string, qBarLeft,
std::string, qBarRight,
std::string, qSpectator,
std::string, loop,
unsigned int, tOut,
Gamma::Algebra, gammaIn,
Gamma::Algebra, gammaOut,
std::string, output);
};
template <typename FImpl>
class TWeakEye3pt: public Module<WeakEye3ptPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
class Metadata: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Metadata,
Gamma::Algebra, in,
Gamma::Algebra, out,
Gamma::Algebra, op,
unsigned int, trace);
};
typedef Correlator<Metadata> Result;
public:
// constructor
TWeakEye3pt(const std::string name);
// destructor
virtual ~TWeakEye3pt(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(WeakEye3pt, TWeakEye3pt<FIMPL>, MContraction);
/******************************************************************************
* TWeakEye3pt implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TWeakEye3pt<FImpl>::TWeakEye3pt(const std::string name)
: Module<WeakEye3ptPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TWeakEye3pt<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().qBarLeft, par().qBarRight,
par().qSpectator, par().loop};
return in;
}
template <typename FImpl>
std::vector<std::string> TWeakEye3pt<FImpl>::getOutput(void)
{
std::vector<std::string> out = {};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakEye3pt<FImpl>::setup(void)
{
envTmpLat(ComplexField, "corr");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakEye3pt<FImpl>::execute(void)
{
LOG(Message) << "Computing mesonic weak 3pt contractions, eye topologies" << std::endl;
LOG(Message) << "gIn : " << par().gammaIn << std::endl;
LOG(Message) << "gOut: " << par().gammaIn << std::endl;
LOG(Message) << "tOut: " << par().tOut << std::endl;
LOG(Message) << "qbl : " << par().qBarLeft << std::endl;
LOG(Message) << "qbr : " << par().qBarRight << std::endl;
LOG(Message) << "qs : " << par().qSpectator << std::endl;
LOG(Message) << "loop: " << par().loop << std::endl;
std::vector<Result> result;
Result r;
auto &qbl = envGet(PropagatorField, par().qBarLeft);
auto &qbr = envGet(PropagatorField, par().qBarRight);
auto &loop = envGet(PropagatorField, par().loop);
auto &qs = envGet(SlicedPropagator, par().qSpectator);
auto qst = qs[par().tOut];
Gamma gIn(par().gammaIn), gOut(par().gammaOut);
Gamma g5(Gamma::Algebra::Gamma5);
envGetTmp(ComplexField, corr);
r.info.in = par().gammaIn;
r.info.out = par().gammaOut;
for (auto &G: Gamma::gall)
{
SlicedComplex buf;
r.info.op = G.g;
// one trace
corr = trace(qbr*gOut*qst*adj(gIn)*g5*adj(qbl)*g5*G*loop*G);
sliceSum(corr, buf, Tp);
r.corr.clear();
for (unsigned int t = 0; t < buf.size(); ++t)
{
r.corr.push_back(TensorRemove(buf[t]));
}
r.info.trace = 1;
result.push_back(r);
// two traces
corr = trace(qbr*gOut*qst*adj(gIn)*g5*adj(qbl)*g5*G)*trace(loop*G);
sliceSum(corr, buf, Tp);
r.corr.clear();
for (unsigned int t = 0; t < buf.size(); ++t)
{
r.corr.push_back(TensorRemove(buf[t]));
}
r.info.trace = 2;
result.push_back(r);
}
saveResult(par().output, "weakEye3pt", result);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MContraction_WeakEye3pt_hpp_

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakMesonDecayKl2.cc
Copyright (C) 2015-2018
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/WeakMesonDecayKl2.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TWeakMesonDecayKl2<FIMPL>;

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@ -1,185 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakMesonDecayKl2.hpp
Copyright (C) 2015-2018
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MContraction_WeakMesonDecayKl2_hpp_
#define Hadrons_MContraction_WeakMesonDecayKl2_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/*
* Kl2 contraction
* -----------------------------
*
* contraction for Kl2 decay, including the lepton
*
* trace(q1*adj(q2)*g5*gL[mu]) * (gL[mu] * lepton)_{a,b}
*
* with open spinor indices (a,b) for the lepton part
*
* q1 lepton
* /------------\ /------------
* / \ /
* / \H_W/
* g_5 * * *
* \ /
* \ /
* \____________/
* q2
*
* * options:
* - q1: input propagator 1 (string)
* - q2: input propagator 2 (string)
* - lepton: input lepton (string)
*/
/******************************************************************************
* TWeakMesonDecayKl2 *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MContraction)
class WeakMesonDecayKl2Par: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(WeakMesonDecayKl2Par,
std::string, q1,
std::string, q2,
std::string, lepton,
std::string, output);
};
template <typename FImpl>
class TWeakMesonDecayKl2: public Module<WeakMesonDecayKl2Par>
{
public:
FERM_TYPE_ALIASES(FImpl,);
typedef typename SpinMatrixField::vector_object::scalar_object SpinMatrix;
class Result: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<SpinMatrix>, corr);
};
public:
// constructor
TWeakMesonDecayKl2(const std::string name);
// destructor
virtual ~TWeakMesonDecayKl2(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// execution
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(WeakMesonDecayKl2, TWeakMesonDecayKl2<FIMPL>, MContraction);
/******************************************************************************
* TWeakMesonDecayKl2 implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TWeakMesonDecayKl2<FImpl>::TWeakMesonDecayKl2(const std::string name)
: Module<WeakMesonDecayKl2Par>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TWeakMesonDecayKl2<FImpl>::getInput(void)
{
std::vector<std::string> input = {par().q1, par().q2, par().lepton};
return input;
}
template <typename FImpl>
std::vector<std::string> TWeakMesonDecayKl2<FImpl>::getOutput(void)
{
std::vector<std::string> output = {};
return output;
}
// setup ////////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakMesonDecayKl2<FImpl>::setup(void)
{
envTmpLat(ComplexField, "c");
envTmpLat(PropagatorField, "prop_buf");
envCreateLat(PropagatorField, getName());
envTmpLat(SpinMatrixField, "buf");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakMesonDecayKl2<FImpl>::execute(void)
{
LOG(Message) << "Computing QED Kl2 contractions '" << getName() << "' using"
<< " quarks '" << par().q1 << "' and '" << par().q2 << "' and"
<< "lepton '" << par().lepton << "'" << std::endl;
Gamma g5(Gamma::Algebra::Gamma5);
int nt = env().getDim(Tp);
std::vector<SpinMatrix> res_summed;
Result r;
auto &res = envGet(PropagatorField, getName()); res = zero;
auto &q1 = envGet(PropagatorField, par().q1);
auto &q2 = envGet(PropagatorField, par().q2);
auto &lepton = envGet(PropagatorField, par().lepton);
envGetTmp(SpinMatrixField, buf);
envGetTmp(ComplexField, c);
envGetTmp(PropagatorField, prop_buf);
for (unsigned int mu = 0; mu < 4; ++mu)
{
c = zero;
//hadronic part: trace(q1*adj(q2)*g5*gL[mu])
c = trace(q1*adj(q2)*g5*GammaL(Gamma::gmu[mu]));
prop_buf = 1.;
//multiply lepton part
res += c * prop_buf * GammaL(Gamma::gmu[mu]) * lepton;
}
buf = peekColour(res, 0, 0);
sliceSum(buf, r.corr, Tp);
saveResult(par().output, "weakdecay", r);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MContraction_WeakMesonDecayKl2_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakNonEye3pt.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MContraction/WeakNonEye3pt.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MContraction;
template class Grid::Hadrons::MContraction::TWeakNonEye3pt<FIMPL>;

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@ -1,198 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MContraction/WeakNonEye3pt.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Lanny91 <andrew.lawson@gmail.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MContraction_WeakNonEye3pt_hpp_
#define Hadrons_MContraction_WeakNonEye3pt_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/*
* Weak Hamiltonian meson 3-pt diagrams, non-eye topologies.
*
* Schematic:
* qbl qbr | qbl qbr
* /--<--¬ /--<--¬ | /--<--¬ /--<--¬
* / \ / \ | / \ / \
* / \ / \ | / \ / \
* / \ / \ | / \ / \
* gIn * * G * gOut | gIn * G * * G * gOut
* \ * G | | \ / \ /
* \ / \ / | \ / \ /
* \ / \ / | \ / \ /
* \ / \ / | \-->--/ \-->--/
* \-->--/ \-->--/ | ql qr
* ql qr |
* one trace | two traces
*
* one trace : tr(ql*adj(gIn)*g5*adj(qbl)*g5*G*qbr*gOut*g5*adj(qr)*g5*G)
* two traces: tr(ql*adj(gIn)*g5*adj(qbl)*g5*G)*tr(qbr*gOut*g5*adj(qr)*g5*G)
*
*/
BEGIN_MODULE_NAMESPACE(MContraction)
class WeakNonEye3ptPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(WeakNonEye3ptPar,
std::string, qLeft,
std::string, qBarLeft,
std::string, qRight,
std::string, qBarRight,
Gamma::Algebra, gammaIn,
Gamma::Algebra, gammaOut,
std::string, output);
};
template <typename FImpl>
class TWeakNonEye3pt: public Module<WeakNonEye3ptPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
class Metadata: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Metadata,
Gamma::Algebra, in,
Gamma::Algebra, out,
Gamma::Algebra, op,
unsigned int, trace);
};
typedef Correlator<Metadata> Result;
public:
// constructor
TWeakNonEye3pt(const std::string name);
// destructor
virtual ~TWeakNonEye3pt(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(WeakNonEye3pt, TWeakNonEye3pt<FIMPL>, MContraction);
/******************************************************************************
* TWeakNonEye3pt implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TWeakNonEye3pt<FImpl>::TWeakNonEye3pt(const std::string name)
: Module<WeakNonEye3ptPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TWeakNonEye3pt<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().qLeft, par().qBarLeft,
par().qRight, par().qBarRight};
return in;
}
template <typename FImpl>
std::vector<std::string> TWeakNonEye3pt<FImpl>::getOutput(void)
{
std::vector<std::string> out = {};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakNonEye3pt<FImpl>::setup(void)
{
envTmpLat(ComplexField, "corr");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TWeakNonEye3pt<FImpl>::execute(void)
{
LOG(Message) << "Computing mesonic weak 3pt contractions, non-eye topologies" << std::endl;
LOG(Message) << "gIn : " << par().gammaIn << std::endl;
LOG(Message) << "gOut: " << par().gammaIn << std::endl;
LOG(Message) << "ql : " << par().qLeft << std::endl;
LOG(Message) << "qbl : " << par().qBarLeft << std::endl;
LOG(Message) << "qr : " << par().qRight << std::endl;
LOG(Message) << "qbr : " << par().qBarRight << std::endl;
std::vector<Result> result;
Result r;
auto &ql = envGet(PropagatorField, par().qLeft);
auto &qbl = envGet(PropagatorField, par().qBarLeft);
auto &qr = envGet(PropagatorField, par().qRight);
auto &qbr = envGet(PropagatorField, par().qBarRight);
Gamma gIn(par().gammaIn), gOut(par().gammaOut);
Gamma g5(Gamma::Algebra::Gamma5);
envGetTmp(ComplexField, corr);
r.info.in = par().gammaIn;
r.info.out = par().gammaOut;
for (auto &G: Gamma::gall)
{
SlicedComplex buf;
r.info.op = G.g;
// one trace
corr = trace(ql*adj(gIn)*g5*adj(qbl)*g5*G*qbr*gOut*g5*adj(qr)*g5*G);
sliceSum(corr, buf, Tp);
r.corr.clear();
for (unsigned int t = 0; t < buf.size(); ++t)
{
r.corr.push_back(TensorRemove(buf[t]));
}
r.info.trace = 1;
result.push_back(r);
// two traces
corr = trace(ql*adj(gIn)*g5*adj(qbl)*g5*G)*trace(qbr*gOut*g5*adj(qr)*g5*G);
sliceSum(corr, buf, Tp);
r.corr.clear();
for (unsigned int t = 0; t < buf.size(); ++t)
{
r.corr.push_back(TensorRemove(buf[t]));
}
r.info.trace = 2;
result.push_back(r);
}
saveResult(par().output, "weakNonEye3pt", result);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MContraction_WeakNonEye3pt_hpp_

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MFermion/EMLepton.cc
Copyright (C) 2015-2019
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MFermion/EMLepton.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MFermion;
template class Grid::Hadrons::MFermion::TEMLepton<FIMPL>;

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@ -1,315 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MFermion/EMLepton.hpp
Copyright (C) 2015-2019
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MFermion_EMLepton_hpp_
#define Hadrons_MFermion_EMLepton_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/*******************************************************************************
*
* Calculates a free lepton propagator with a sequential insertion of
* i*\gamma_mu A_mu with a photon field A_mu
*
* L(x) = \sum_y S(x,y) i*\gamma_mu*A_mu S(y,xl) \delta_{(tl-x0),dt}
*
* with a wall source for the lepton at tl
*
* In addition outputs the propagator without photon vertex
*
* L^{free}(x) = S(x,xl) \delta_{(tl-x0),dt}
*
*
* options:
* - action: fermion action used for propagator (string)
* - emField: photon field A_mu (string)
* - mass: input mass for the lepton propagator
* - boundary: boundary conditions for the lepton propagator, e.g. "1 1 1 -1"
* - twist: twisted boundary for lepton propagator, e.g. "0.0 0.0 0.0 0.5"
* - deltat: list of source-sink separations
*
*******************************************************************************/
/******************************************************************************
* EMLepton *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MFermion)
class EMLeptonPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(EMLeptonPar,
std::string, action,
std::string, emField,
double, mass,
std::string , boundary,
std::string, twist,
std::vector<unsigned int>, deltat);
};
template <typename FImpl>
class TEMLepton: public Module<EMLeptonPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
typedef PhotonR::GaugeField EmField;
public:
// constructor
TEMLepton(const std::string name);
// destructor
virtual ~TEMLepton(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// setup
virtual void setup(void);
// execution
virtual void execute(void);
private:
unsigned int Ls_;
};
MODULE_REGISTER_TMP(EMLepton, TEMLepton<FIMPL>, MFermion);
/******************************************************************************
* TEMLepton implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TEMLepton<FImpl>::TEMLepton(const std::string name)
: Module<EMLeptonPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TEMLepton<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().action, par().emField};
return in;
}
template <typename FImpl>
std::vector<std::string> TEMLepton<FImpl>::getOutput(void)
{
std::vector<std::string> out = {};
for(int i=0; i<par().deltat.size(); i++)
{
out.push_back(std::to_string(par().deltat[i]) + "_" + getName() + "_free");
out.push_back(std::to_string(par().deltat[i]) + "_" + getName());
}
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TEMLepton<FImpl>::setup(void)
{
Ls_ = env().getObjectLs(par().action);
for(int i=0; i<par().deltat.size(); i++)
{
envCreateLat(PropagatorField, std::to_string(par().deltat[i]) + "_" + getName() + "_free");
envCreateLat(PropagatorField, std::to_string(par().deltat[i]) + "_" + getName());
}
envTmpLat(FermionField, "source", Ls_);
envTmpLat(FermionField, "sol", Ls_);
envTmpLat(FermionField, "tmp");
envTmpLat(PropagatorField, "sourcetmp");
envTmpLat(PropagatorField, "proptmp");
envTmpLat(PropagatorField, "freetmp");
envTmp(Lattice<iScalar<vInteger>>, "tlat",1, envGetGrid(LatticeComplex));
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TEMLepton<FImpl>::execute(void)
{
LOG(Message) << "Computing free fermion propagator '" << getName() << "'"
<< std::endl;
auto &mat = envGet(FMat, par().action);
RealD mass = par().mass;
Complex ci(0.0,1.0);
envGetTmp(FermionField, source);
envGetTmp(FermionField, sol);
envGetTmp(FermionField, tmp);
LOG(Message) << "Calculating a lepton Propagator with sequential Aslash insertion with lepton mass "
<< mass << " using the action '" << par().action
<< "' for fixed source-sink separation of " << par().deltat << std::endl;
envGetTmp(Lattice<iScalar<vInteger>>, tlat);
LatticeCoordinate(tlat, Tp);
std::vector<double> twist = strToVec<double>(par().twist);
if(twist.size() != Nd)
{
HADRONS_ERROR(Size, "number of twist angles does not match number of dimensions");
}
std::vector<Complex> boundary = strToVec<Complex>(par().boundary);
if(boundary.size() != Nd)
{
HADRONS_ERROR(Size, "number of boundary conditions does not match number of dimensions");
}
auto &stoch_photon = envGet(EmField, par().emField);
unsigned int nt = env().getDim(Tp);
envGetTmp(PropagatorField, proptmp);
envGetTmp(PropagatorField, freetmp);
envGetTmp(PropagatorField, sourcetmp);
std::vector<int> position;
SitePropagator id;
id = 1.;
unsigned int tl=0;
//wallsource at tl
sourcetmp = 1.;
sourcetmp = where((tlat == tl), sourcetmp, 0.*sourcetmp);
//free propagator from pt source
for (unsigned int s = 0; s < Ns; ++s)
{
LOG(Message) << "Calculation for spin= " << s << std::endl;
if (Ls_ == 1)
{
PropToFerm<FImpl>(source, sourcetmp, s, 0);
}
else
{
PropToFerm<FImpl>(tmp, sourcetmp, s, 0);
// 5D source if action is 5d
mat.ImportPhysicalFermionSource(tmp, source);
}
sol = zero;
mat.FreePropagator(source,sol,mass,boundary,twist);
if (Ls_ == 1)
{
FermToProp<FImpl>(freetmp, sol, s, 0);
}
// create 4D propagators from 5D one if necessary
if (Ls_ > 1)
{
mat.ExportPhysicalFermionSolution(sol, tmp);
FermToProp<FImpl>(freetmp, tmp, s, 0);
}
}
for(unsigned int dt=0;dt<par().deltat.size();dt++){
PropagatorField &lep = envGet(PropagatorField, std::to_string(par().deltat[dt]) + "_" + getName() + "_free");
for(tl=0;tl<nt;tl++){
//shift free propagator to different source positions
//account for possible anti-periodic boundary in time
proptmp = Cshift(freetmp,Tp, -tl);
proptmp = where( tlat < tl, boundary[Tp]*proptmp, proptmp);
// free propagator for fixed source-sink separation
lep = where(tlat == (tl-par().deltat[dt]+nt)%nt, proptmp, lep);
}
//account for possible anti-periodic boundary in time
lep = where( tlat >= nt-par().deltat[dt], boundary[Tp]*lep, lep);
}
for(tl=0;tl<nt;tl++){
//shift free propagator to different source positions
//account for possible anti-periodic boundary in time
proptmp = Cshift(freetmp,Tp, -tl);
proptmp = where( tlat < tl, boundary[Tp]*proptmp, proptmp);
// i*A_mu*gamma_mu
sourcetmp = zero;
for(unsigned int mu=0;mu<=3;mu++)
{
Gamma gmu(Gamma::gmu[mu]);
sourcetmp += ci * PeekIndex<LorentzIndex>(stoch_photon, mu) * (gmu * proptmp );
}
proptmp = zero;
//sequential propagator from i*Aslash*S
LOG(Message) << "Sequential propagator for t= " << tl << std::endl;
for (unsigned int s = 0; s < Ns; ++s)
{
LOG(Message) << "Calculation for spin= " << s << std::endl;
if (Ls_ == 1)
{
PropToFerm<FImpl>(source, sourcetmp, s, 0);
}
else
{
PropToFerm<FImpl>(tmp, sourcetmp, s, 0);
// 5D source if action is 5d
mat.ImportPhysicalFermionSource(tmp, source);
}
sol = zero;
mat.FreePropagator(source,sol,mass,boundary,twist);
if (Ls_ == 1)
{
FermToProp<FImpl>(proptmp, sol, s, 0);
}
// create 4D propagators from 5D one if necessary
if (Ls_ > 1)
{
mat.ExportPhysicalFermionSolution(sol, tmp);
FermToProp<FImpl>(proptmp, tmp, s, 0);
}
}
// keep the result for the desired delta t
for(unsigned int dt=0;dt<par().deltat.size();dt++){
PropagatorField &Aslashlep = envGet(PropagatorField, std::to_string(par().deltat[dt]) + "_" + getName());
Aslashlep = where(tlat == (tl-par().deltat[dt]+nt)%nt, proptmp, Aslashlep);
}
}
//account for possible anti-periodic boundary in time
for(unsigned int dt=0;dt<par().deltat.size();dt++){
PropagatorField &Aslashlep = envGet(PropagatorField, std::to_string(par().deltat[dt]) + "_" + getName());
Aslashlep = where( tlat >= nt-par().deltat[dt], boundary[Tp]*Aslashlep, Aslashlep);
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MFermion_EMLepton_hpp_

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MFermion/FreeProp.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MFermion/FreeProp.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MFermion;
template class Grid::Hadrons::MFermion::TFreeProp<FIMPL>;

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@ -1,197 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MFermion/FreeProp.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MFermion_FreeProp_hpp_
#define Hadrons_MFermion_FreeProp_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* FreeProp *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MFermion)
class FreePropPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(FreePropPar,
std::string, source,
std::string, action,
double, mass,
std::string , boundary,
std::string, twist);
};
template <typename FImpl>
class TFreeProp: public Module<FreePropPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
// constructor
TFreeProp(const std::string name);
// destructor
virtual ~TFreeProp(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// setup
virtual void setup(void);
// execution
virtual void execute(void);
private:
unsigned int Ls_;
};
MODULE_REGISTER_TMP(FreeProp, TFreeProp<FIMPL>, MFermion);
/******************************************************************************
* TFreeProp implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TFreeProp<FImpl>::TFreeProp(const std::string name)
: Module<FreePropPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TFreeProp<FImpl>::getInput(void)
{
std::vector<std::string> in = {par().source, par().action};
return in;
}
template <typename FImpl>
std::vector<std::string> TFreeProp<FImpl>::getOutput(void)
{
std::vector<std::string> out = {getName(), getName() + "_5d"};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TFreeProp<FImpl>::setup(void)
{
Ls_ = env().getObjectLs(par().action);
envCreateLat(PropagatorField, getName());
envTmpLat(FermionField, "source", Ls_);
envTmpLat(FermionField, "sol", Ls_);
envTmpLat(FermionField, "tmp");
if (Ls_ > 1)
{
envCreateLat(PropagatorField, getName() + "_5d", Ls_);
}
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TFreeProp<FImpl>::execute(void)
{
LOG(Message) << "Computing free fermion propagator '" << getName() << "'"
<< std::endl;
std::string propName = (Ls_ == 1) ? getName() : (getName() + "_5d");
auto &prop = envGet(PropagatorField, propName);
auto &fullSrc = envGet(PropagatorField, par().source);
auto &mat = envGet(FMat, par().action);
RealD mass = par().mass;
envGetTmp(FermionField, source);
envGetTmp(FermionField, sol);
envGetTmp(FermionField, tmp);
LOG(Message) << "Calculating a free Propagator with mass " << mass
<< " using the action '" << par().action
<< "' on source '" << par().source << "'" << std::endl;
for (unsigned int s = 0; s < Ns; ++s)
for (unsigned int c = 0; c < FImpl::Dimension; ++c)
{
LOG(Message) << "Calculation for spin= " << s << ", color= " << c
<< std::endl;
// source conversion for 4D sources
if (!env().isObject5d(par().source))
{
if (Ls_ == 1)
{
PropToFerm<FImpl>(source, fullSrc, s, c);
}
else
{
PropToFerm<FImpl>(tmp, fullSrc, s, c);
mat.ImportPhysicalFermionSource(tmp, source);
}
}
// source conversion for 5D sources
else
{
if (Ls_ != env().getObjectLs(par().source))
{
HADRONS_ERROR(Size, "Ls mismatch between quark action and source");
}
else
{
PropToFerm<FImpl>(source, fullSrc, s, c);
}
}
sol = zero;
std::vector<double> twist = strToVec<double>(par().twist);
if(twist.size() != Nd)
{
HADRONS_ERROR(Size, "number of twist angles does not match number of dimensions");
}
std::vector<Complex> boundary = strToVec<Complex>(par().boundary);
if(boundary.size() != Nd)
{
HADRONS_ERROR(Size, "number of boundary conditions does not match number of dimensions");
}
mat.FreePropagator(source,sol,mass,boundary,twist);
FermToProp<FImpl>(prop, sol, s, c);
// create 4D propagators from 5D one if necessary
if (Ls_ > 1)
{
PropagatorField &p4d = envGet(PropagatorField, getName());
mat.ExportPhysicalFermionSolution(sol, tmp);
FermToProp<FImpl>(p4d, tmp, s, c);
}
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MFermion_FreeProp_hpp_

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@ -1,35 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MFermion/GaugeProp.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MFermion/GaugeProp.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MFermion;
template class Grid::Hadrons::MFermion::TGaugeProp<FIMPL>;
template class Grid::Hadrons::MFermion::TGaugeProp<ZFIMPL>;

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/Electrify.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MGauge/Electrify.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MGauge;
template class Grid::Hadrons::MGauge::TElectrify<GIMPL>;

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@ -1,153 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/Electrify.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MGauge_Electrify_hpp_
#define Hadrons_MGauge_Electrify_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Electrify gauge *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MGauge)
/****************************************************************************
* Electrify a gauge field:
*
* Ue_mu(x) = U_mu(x)*exp(ieqA_mu(x))
*
* with
*
* - gauge: U_mu(x): gauge field
* - emField: A_mu(x): electromagnetic photon field
* - e: value for the elementary charge
* - q: charge in units of e
*
*****************************************************************************/
class ElectrifyPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(ElectrifyPar,
std::string, gauge,
std::string, emField,
double, e,
double, charge);
};
template <typename GImpl>
class TElectrify: public Module<ElectrifyPar>
{
public:
GAUGE_TYPE_ALIASES(GImpl,);
public:
typedef PhotonR::GaugeField EmField;
public:
// constructor
TElectrify(const std::string name);
// destructor
virtual ~TElectrify(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
protected:
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(Electrify, TElectrify<GIMPL>, MGauge);
/******************************************************************************
* TElectrify implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename GImpl>
TElectrify<GImpl>::TElectrify(const std::string name)
: Module<ElectrifyPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename GImpl>
std::vector<std::string> TElectrify<GImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge, par().emField};
return in;
}
template <typename GImpl>
std::vector<std::string> TElectrify<GImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename GImpl>
void TElectrify<GImpl>::setup(void)
{
envCreateLat(GaugeField, getName());
envTmpLat(LatticeComplex, "eiAmu");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename GImpl>
void TElectrify<GImpl>::execute(void)
{
LOG(Message) << "Electrify the gauge field " << par().gauge << " using the photon field "
<< par().emField << " with charge e*q= " << par().e << "*" << par().charge << std::endl;
auto &Ue = envGet(GaugeField, getName());
auto &U = envGet(GaugeField, par().gauge);
auto &A = envGet(EmField, par().emField);
envGetTmp(LatticeComplex, eiAmu);
Complex i(0.0,1.0);
for(unsigned int mu = 0; mu < env().getNd(); mu++)
{
eiAmu = exp(i * (Real)(par().e * par().charge) * PeekIndex<LorentzIndex>(A, mu));
PokeIndex<LorentzIndex>(Ue, PeekIndex<LorentzIndex>(U, mu) * eiAmu, mu);
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MGauge_Electrify_hpp_

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/GaugeFix.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MGauge/GaugeFix.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MGauge;
template class Grid::Hadrons::MGauge::TGaugeFix<GIMPL>;

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@ -1,143 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/GaugeFix.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Nils Asmussen <n.asmussen@soton.ac.uk>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MGaugeFix_hpp_
#define Hadrons_MGaugeFix_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Grid/qcd/utils/GaugeFix.h>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Fix gauge *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MGauge)
GRID_SERIALIZABLE_ENUM(Fix, undef, coulomb, Nd - 1, landau, -1);
class GaugeFixPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(GaugeFixPar,
std::string, gauge,
Real, alpha,
int, maxiter,
Real, Omega_tol,
Real, Phi_tol,
Fix, gaugeFix,
bool, Fourier);
};
template <typename GImpl>
class TGaugeFix: public Module<GaugeFixPar>
{
public:
GAUGE_TYPE_ALIASES(GImpl,);
typedef typename GImpl::GaugeLinkField GaugeMat;
public:
// constructor
TGaugeFix(const std::string name);
// destructor
virtual ~TGaugeFix(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(GaugeFix, TGaugeFix<GIMPL>, MGauge);
/******************************************************************************
* TGaugeFix implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename GImpl>
TGaugeFix<GImpl>::TGaugeFix(const std::string name)
: Module<GaugeFixPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename GImpl>
std::vector<std::string> TGaugeFix<GImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge};
return in;
}
template <typename GImpl>
std::vector<std::string> TGaugeFix<GImpl>::getOutput(void)
{
std::vector<std::string> out = {getName(), getName()+"_xform"};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename GImpl>
void TGaugeFix<GImpl>::setup(void)
{
envCreateLat(GaugeField, getName());
envCreateLat(GaugeMat, getName()+"_xform");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename GImpl>
void TGaugeFix<GImpl>::execute(void)
//Loads the gauge and fixes it
{
std::cout << "executing" << std::endl;
LOG(Message) << "Fixing the Gauge " << par().gauge << " using "
<< par().gaugeFix << " guage fixing. " << Nd - 1 << std::endl;
auto &U = envGet(GaugeField, par().gauge);
auto &Umu = envGet(GaugeField, getName());
auto &xform = envGet(GaugeMat, getName()+"_xform");
LOG(Message) << "Gauge Field fetched" << std::endl;
//do we allow maxiter etc to be user set?
Real alpha = par().alpha;
int maxiter = par().maxiter;
Real Omega_tol = par().Omega_tol;
Real Phi_tol = par().Phi_tol;
int gaugeFix = par().gaugeFix;
bool Fourier = par().Fourier;
Umu = U;
FourierAcceleratedGaugeFixer<PeriodicGimplR>::SteepestDescentGaugeFix(Umu,xform,alpha,maxiter,Omega_tol,Phi_tol,Fourier,gaugeFix);
LOG(Message) << "Gauge Fixed" << std::endl;
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MGaugeFix_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/Random.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MGauge/Random.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MGauge;
template class Grid::Hadrons::MGauge::TRandom<GIMPL>;

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/StoutSmearing.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MGauge/StoutSmearing.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MGauge;
template class Grid::Hadrons::MGauge::TStoutSmearing<GIMPL>;

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@ -1,135 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/StoutSmearing.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MGauge_StoutSmearing_hpp_
#define Hadrons_MGauge_StoutSmearing_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Stout smearing *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MGauge)
class StoutSmearingPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(StoutSmearingPar,
std::string, gauge,
unsigned int, steps,
double, rho);
};
template <typename GImpl>
class TStoutSmearing: public Module<StoutSmearingPar>
{
public:
GAUGE_TYPE_ALIASES(GImpl,);
public:
// constructor
TStoutSmearing(const std::string name);
// destructor
virtual ~TStoutSmearing(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(StoutSmearing, TStoutSmearing<GIMPL>, MGauge);
/******************************************************************************
* TStoutSmearing implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename GImpl>
TStoutSmearing<GImpl>::TStoutSmearing(const std::string name)
: Module<StoutSmearingPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename GImpl>
std::vector<std::string> TStoutSmearing<GImpl>::getInput(void)
{
std::vector<std::string> in = {par().gauge};
return in;
}
template <typename GImpl>
std::vector<std::string> TStoutSmearing<GImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename GImpl>
void TStoutSmearing<GImpl>::setup(void)
{
envCreateLat(GaugeField, getName());
envTmpLat(GaugeField, "buf");
}
// execution ///////////////////////////////////////////////////////////////////
template <typename GImpl>
void TStoutSmearing<GImpl>::execute(void)
{
LOG(Message) << "Smearing '" << par().gauge << "' with " << par().steps
<< " step" << ((par().steps > 1) ? "s" : "")
<< " of stout smearing and rho= " << par().rho << std::endl;
Smear_Stout<GImpl> smearer(par().rho);
auto &U = envGet(GaugeField, par().gauge);
auto &Usmr = envGet(GaugeField, getName());
envGetTmp(GaugeField, buf);
buf = U;
LOG(Message) << "plaquette= " << WilsonLoops<GImpl>::avgPlaquette(U)
<< std::endl;
for (unsigned int n = 0; n < par().steps; ++n)
{
smearer.smear(Usmr, buf);
buf = Usmr;
LOG(Message) << "plaquette= " << WilsonLoops<GImpl>::avgPlaquette(Usmr)
<< std::endl;
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MGauge_StoutSmearing_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MGauge/Unit.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MGauge/Unit.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MGauge;
template class Grid::Hadrons::MGauge::TUnit<GIMPL>;

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadA2AVectors.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadA2AVectors.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadA2AVectors<FIMPL>;

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@ -1,40 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadBinary.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadBinary.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadBinary<GIMPL>;
template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<2>>;
template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<3>>;
template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<4>>;
template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<5>>;
template class Grid::Hadrons::MIO::TLoadBinary<ScalarNxNAdjImplR<6>>;

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadCoarseEigenPack.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL,HADRONS_DEFAULT_LANCZOS_NBASIS>>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MIO::TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL,HADRONS_DEFAULT_LANCZOS_NBASIS, FIMPLF>>;
#endif

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@ -1,153 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadCoarseEigenPack.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MIO_LoadCoarseEigenPack_hpp_
#define Hadrons_MIO_LoadCoarseEigenPack_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/EigenPack.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Load local coherence eigen vectors/values package *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MIO)
class LoadCoarseEigenPackPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(LoadCoarseEigenPackPar,
std::string, filestem,
bool, multiFile,
unsigned int, sizeFine,
unsigned int, sizeCoarse,
unsigned int, Ls,
std::vector<int>, blockSize);
};
template <typename Pack>
class TLoadCoarseEigenPack: public Module<LoadCoarseEigenPackPar>
{
public:
typedef typename Pack::Field Field;
typedef typename Pack::FieldIo FieldIo;
typedef typename Pack::CoarseField CoarseField;
typedef typename Pack::CoarseFieldIo CoarseFieldIo;
typedef CoarseEigenPack<Field, CoarseField, FieldIo, CoarseFieldIo> BasePack;
template <typename vtype>
using iImplScalar = iScalar<iScalar<iScalar<vtype>>>;
typedef iImplScalar<typename Pack::Field::vector_type> SiteComplex;
public:
// constructor
TLoadCoarseEigenPack(const std::string name);
// destructor
virtual ~TLoadCoarseEigenPack(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(LoadCoarseFermionEigenPack,
ARG(TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL, HADRONS_DEFAULT_LANCZOS_NBASIS>>), MIO);
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
MODULE_REGISTER_TMP(LoadCoarseFermionEigenPackIo32,
ARG(TLoadCoarseEigenPack<CoarseFermionEigenPack<FIMPL, HADRONS_DEFAULT_LANCZOS_NBASIS, FIMPLF>>), MIO);
#endif
/******************************************************************************
* TLoadCoarseEigenPack implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename Pack>
TLoadCoarseEigenPack<Pack>::TLoadCoarseEigenPack(const std::string name)
: Module<LoadCoarseEigenPackPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename Pack>
std::vector<std::string> TLoadCoarseEigenPack<Pack>::getInput(void)
{
std::vector<std::string> in;
return in;
}
template <typename Pack>
std::vector<std::string> TLoadCoarseEigenPack<Pack>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename Pack>
void TLoadCoarseEigenPack<Pack>::setup(void)
{
GridBase *gridIo = nullptr, *gridCoarseIo = nullptr;
if (typeHash<Field>() != typeHash<FieldIo>())
{
gridIo = envGetRbGrid(FieldIo, par().Ls);
}
if (typeHash<CoarseField>() != typeHash<CoarseFieldIo>())
{
gridCoarseIo = envGetCoarseGrid(CoarseFieldIo, par().blockSize, par().Ls);
}
envCreateDerived(BasePack, Pack, getName(), par().Ls, par().sizeFine,
par().sizeCoarse, envGetRbGrid(Field, par().Ls),
envGetCoarseGrid(CoarseField, par().blockSize, par().Ls),
gridIo, gridCoarseIo);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename Pack>
void TLoadCoarseEigenPack<Pack>::execute(void)
{
auto cg = envGetCoarseGrid(CoarseField, par().blockSize, par().Ls);
auto &epack = envGetDerived(BasePack, Pack, getName());
Lattice<SiteComplex> dummy(cg);
epack.read(par().filestem, par().multiFile, vm().getTrajectory());
LOG(Message) << "Block Gramm-Schmidt pass 1"<< std::endl;
blockOrthogonalise(dummy, epack.evec);
LOG(Message) << "Block Gramm-Schmidt pass 2"<< std::endl;
blockOrthogonalise(dummy, epack.evec);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MIO_LoadCoarseEigenPack_hpp_

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@ -1,38 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadCosmHol.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadCosmHol.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadCosmHol<ScalarNxNAdjImplR<2>>;
template class Grid::Hadrons::MIO::TLoadCosmHol<ScalarNxNAdjImplR<3>>;
template class Grid::Hadrons::MIO::TLoadCosmHol<ScalarNxNAdjImplR<4>>;
template class Grid::Hadrons::MIO::TLoadCosmHol<ScalarNxNAdjImplR<5>>;
template class Grid::Hadrons::MIO::TLoadCosmHol<ScalarNxNAdjImplR<6>>;

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@ -1,146 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadCosmHol.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MIO_LoadCosmHol_hpp_
#define Hadrons_MIO_LoadCosmHol_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Load scalar SU(N) configurations *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MIO)
class LoadCosmHolPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(LoadCosmHolPar,
std::string, file);
};
class ScalarActionParameters: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(ScalarActionParameters,
double, mass_squared,
double, lambda,
double, g);
};
template <typename SImpl>
class TLoadCosmHol: public Module<LoadCosmHolPar>
{
public:
typedef typename SImpl::Field Field;
public:
// constructor
TLoadCosmHol(const std::string name);
// destructor
virtual ~TLoadCosmHol(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(LoadCosmHolSU2, TLoadCosmHol<ScalarNxNAdjImplR<2>>, MIO);
MODULE_REGISTER_TMP(LoadCosmHolSU3, TLoadCosmHol<ScalarNxNAdjImplR<3>>, MIO);
MODULE_REGISTER_TMP(LoadCosmHolSU4, TLoadCosmHol<ScalarNxNAdjImplR<4>>, MIO);
MODULE_REGISTER_TMP(LoadCosmHolSU5, TLoadCosmHol<ScalarNxNAdjImplR<5>>, MIO);
MODULE_REGISTER_TMP(LoadCosmHolSU6, TLoadCosmHol<ScalarNxNAdjImplR<6>>, MIO);
/******************************************************************************
* TLoadCosmHol implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename SImpl>
TLoadCosmHol<SImpl>::TLoadCosmHol(const std::string name)
: Module<LoadCosmHolPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename SImpl>
std::vector<std::string> TLoadCosmHol<SImpl>::getInput(void)
{
std::vector<std::string> in;
return in;
}
template <typename SImpl>
std::vector<std::string> TLoadCosmHol<SImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename SImpl>
void TLoadCosmHol<SImpl>::setup(void)
{
envCreateLat(Field, getName());
}
// execution ///////////////////////////////////////////////////////////////////
template <typename SImpl>
void TLoadCosmHol<SImpl>::execute(void)
{
ScalarActionParameters md;
std::string filename = par().file + "."
+ std::to_string(vm().getTrajectory());
ScidacReader reader;
const unsigned int N = SImpl::Group::Dimension;
auto &phi = envGet(Field, getName());
LOG(Message) << "Loading CosmHol configuration from file '" << filename
<< "'" << std::endl;
reader.open(filename);
reader.readScidacFieldRecord(phi, md);
reader.close();
LOG(Message) << "tr(phi^2) = "
<< -TensorRemove(sum(trace(phi*phi))).real()/env().getVolume()
<< std::endl;
LOG(Message) << "Configuration parameters:" << std::endl;
LOG(Message) << " N = " << N << std::endl;
LOG(Message) << " m^2 = " << md.mass_squared << std::endl;
LOG(Message) << "lambda = " << md.lambda << std::endl;
LOG(Message) << " g = " << md.g << std::endl;
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MIO_LoadCosmHol_hpp_

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadEigenPack.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadEigenPack.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadEigenPack<FermionEigenPack<FIMPL>, GIMPL>;
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
template class Grid::Hadrons::MIO::TLoadEigenPack<FermionEigenPack<FIMPL, FIMPLF>, GIMPL>;
#endif

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@ -1,191 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadEigenPack.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MIO_LoadEigenPack_hpp_
#define Hadrons_MIO_LoadEigenPack_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/EigenPack.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Load eigen vectors/values package *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MIO)
class LoadEigenPackPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(LoadEigenPackPar,
std::string, filestem,
bool, multiFile,
unsigned int, size,
unsigned int, Ls,
std::string, gaugeXform);
};
template <typename Pack, typename GImpl>
class TLoadEigenPack: public Module<LoadEigenPackPar>
{
public:
typedef typename Pack::Field Field;
typedef typename Pack::FieldIo FieldIo;
typedef BaseEigenPack<Field> BasePack;
public:
GAUGE_TYPE_ALIASES(GImpl, );
typedef typename GImpl::GaugeLinkField GaugeMat;
public:
// constructor
TLoadEigenPack(const std::string name);
// destructor
virtual ~TLoadEigenPack(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(LoadFermionEigenPack, ARG(TLoadEigenPack<FermionEigenPack<FIMPL>, GIMPL>), MIO);
#ifdef GRID_DEFAULT_PRECISION_DOUBLE
MODULE_REGISTER_TMP(LoadFermionEigenPackIo32, ARG(TLoadEigenPack<FermionEigenPack<FIMPL, FIMPLF>, GIMPL>), MIO);
#endif
/******************************************************************************
* TLoadEigenPack implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename Pack, typename GImpl>
TLoadEigenPack<Pack, GImpl>::TLoadEigenPack(const std::string name)
: Module<LoadEigenPackPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename Pack, typename GImpl>
std::vector<std::string> TLoadEigenPack<Pack, GImpl>::getInput(void)
{
std::vector<std::string> in;
if (!par().gaugeXform.empty())
{
in = {par().gaugeXform};
}
return in;
}
template <typename Pack, typename GImpl>
std::vector<std::string> TLoadEigenPack<Pack, GImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename Pack, typename GImpl>
void TLoadEigenPack<Pack, GImpl>::setup(void)
{
GridBase *gridIo = nullptr;
if (typeHash<Field>() != typeHash<FieldIo>())
{
gridIo = envGetRbGrid(FieldIo, par().Ls);
}
envCreateDerived(BasePack, Pack, getName(), par().Ls, par().size,
envGetRbGrid(Field, par().Ls), gridIo);
if (!par().gaugeXform.empty())
{
if (par().Ls > 1)
{
LOG(Message) << "Setup 5d GaugeMat for Ls = " << par().Ls << std::endl;
envTmp(GaugeMat, "tmpXform", par().Ls, envGetGrid5(Field, par().Ls));
envTmp(GaugeMat, "tmpXformOdd", par().Ls, envGetRbGrid5(Field, par().Ls));
}
else
{
LOG(Message) << "Setup 4d GaugeMat for Ls = " << par().Ls << std::endl;
envTmp(GaugeMat, "tmpXform", par().Ls, envGetGrid(Field));
envTmp(GaugeMat, "tmpXformOdd", par().Ls, envGetRbGrid(Field));
}
}
}
// execution ///////////////////////////////////////////////////////////////////
template <typename Pack, typename GImpl>
void TLoadEigenPack<Pack, GImpl>::execute(void)
{
auto &epack = envGetDerived(BasePack, Pack, getName());
epack.read(par().filestem, par().multiFile, vm().getTrajectory());
epack.eval.resize(par().size);
if (!par().gaugeXform.empty())
{
LOG(Message) << "Applying gauge transformation to eigenvectors " << getName()
<< " using " << par().gaugeXform << std::endl;
auto &xform = envGet(GaugeMat, par().gaugeXform);
envGetTmp(GaugeMat, tmpXform);
envGetTmp(GaugeMat, tmpXformOdd);
if (par().Ls > 1)
{
LOG(Message) << "Creating 5d GaugeMat from " << par().gaugeXform << std::endl;
startTimer("5-d gauge transform creation");
for (unsigned int j = 0; j < par().Ls; j++)
{
InsertSlice(xform, tmpXform, j, 0);
}
stopTimer("5-d gauge transform creation");
}
pickCheckerboard(Odd, tmpXformOdd, tmpXform);
startTimer("Transform application");
for (unsigned int i = 0; i < par().size; i++)
{
LOG(Message) << "Applying gauge transformation to eigenvector i = " << i << "/" << par().size << std::endl;
epack.evec[i].checkerboard = Odd;
epack.evec[i] = tmpXformOdd * epack.evec[i];
}
stopTimer("Transform application");
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MIO_LoadEigenPack_hpp_

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@ -1,34 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MIO/LoadNersc.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MIO/LoadNersc.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MIO;
template class Grid::Hadrons::MIO::TLoadNersc<GIMPL>;

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/Amputate.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MNPR/Amputate.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MNPR;
template class Grid::Hadrons::MNPR::TAmputate<FIMPL,FIMPL>;

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@ -1,200 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/Amputate.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Julia Kettle J.R.Kettle-2@sms.ed.ac.uk
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_Amputate_hpp_
#define Hadrons_Amputate_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Grid/Eigen/LU>
//#include <Grid/qcd/utils/PropagatorUtils.h>
//#include <Grid/serialisation/Serialisation.h>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* TAmputate *
Performs bilinear contractions of the type tr[g5*adj(Sout)*g5*G*Sin]
Suitable for non exceptional momenta
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MNPR)
class AmputatePar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(AmputatePar,
std::string, Sin, //need to make this a propogator type?
std::string, Sout, //same
std::string, vertex,
std::string, pin,
std::string, pout,
std::string, output,
std::string, input);
};
template <typename FImpl1, typename FImpl2>
class TAmputate: public Module<AmputatePar>
{
public:
FERM_TYPE_ALIASES(FImpl1, 1);
FERM_TYPE_ALIASES(FImpl2, 2);
class Result: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<Complex>, Vamp,
);
};
public:
// constructor
TAmputate(const std::string name);
// destructor
virtual ~TAmputate(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
virtual SpinColourMatrix invertspincolmat(SpinColourMatrix &scmat);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(Amputate, ARG(TAmputate<FIMPL, FIMPL>), MNPR);
/******************************************************************************
* TAmputate implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
TAmputate<FImpl1, FImpl2>::TAmputate(const std::string name)
: Module<AmputatePar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TAmputate<FImpl1, FImpl2>::getInput(void)
{
std::vector<std::string> input = {par().Sin, par().Sout, par().vertex};
return input;
}
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TAmputate<FImpl1, FImpl2>::getOutput(void)
{
std::vector<std::string> output = {getName()};
return output;
}
// Invert spin colour matrix using Eigen
template <typename Fimpl1, typename Fimpl2>
SpinColourMatrix TAmputate<Fimpl1, Fimpl2>::invertspincolmat(SpinColourMatrix &scmat)
{
Eigen::MatrixXcf scmat_2d(Ns*Nc,Ns*Nc);
for(int ic=0; ic<Nc; ic++){
for(int jc=0; jc<Nc; jc++){
for(int is=0; is<Ns; is++){
for(int js=0; js<Ns; js++){
scmat_2d(Ns*ic+is,Ns*jc+js) = scmat()(is,js)(ic,jc);
}}
}}
Eigen::MatrixXcf scmat_2d_inv = scmat_2d.inverse();
SpinColourMatrix scmat_inv;
for(int ic=0; ic<Nc; ic++){
for(int jc=0; jc<Nc; jc++){
for(int is=0; is<Ns; is++){
for(int js=0; js<Ns; js++){
scmat_inv()(is,js)(ic,jc) = scmat_2d_inv(Ns*ic+is,Ns*jc+js);
}}
}}
return scmat_inv;
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
void TAmputate<FImpl1, FImpl2>::execute(void)
{
LOG(Message) << "Computing bilinear amputations '" << getName() << "' using"
<< " momentum '" << par().Sin << "' and '" << par().Sout << "'"
<< std::endl;
BinaryWriter writer(par().output);
PropagatorField1 &Sin = *env().template getObject<PropagatorField1>(par().Sin); //Do these have the phases taken into account?? Don't think so. FIX
PropagatorField2 &Sout = *env().template getObject<PropagatorField2>(par().Sout);
std::vector<int> pin = strToVec<int>(par().pin), pout = strToVec<int>(par().pout);
std::vector<Real> latt_size(pin.begin(), pin.end());
LatticeComplex pdotxin(env().getGrid()), pdotxout(env().getGrid()), coor(env().getGrid());
LOG(Message) << "Propagators set up " << std::endl;
std::vector<SpinColourMatrix> vertex; // Let's read from file here
Gamma g5(Gamma::Algebra::Gamma5);
Result result;
LOG(Message) << "reading file - " << par().input << std::endl;
BinaryReader reader(par().input);
Complex Ci(0.0,1.0);
std::string svertex;
read(reader,"vertex", vertex);
LOG(Message) << "vertex read" << std::endl;
pdotxin=zero;
pdotxout=zero;
for (unsigned int mu = 0; mu < 4; ++mu)
{
Real TwoPiL = M_PI * 2.0/ latt_size[mu];
LatticeCoordinate(coor,mu);
pdotxin = pdotxin +(TwoPiL * pin[mu]) * coor;
pdotxout= pdotxout +(TwoPiL * pout[mu]) * coor;
}
Sin = Sin*exp(-Ci*pdotxin); //phase corrections
Sout = Sout*exp(-Ci*pdotxout);
SpinColourMatrix Sin_mom = sum(Sin);
SpinColourMatrix Sout_mom = sum(Sout);
LOG(Message) << "summed over lattice" << std::endl;
LOG(Message) << "Lattice -> spincolourmatrix conversion" << std::endl;
SpinColourMatrix Sin_inv = invertspincolmat(Sin_mom);
SpinColourMatrix Sout_inv = invertspincolmat(Sout_mom);
LOG(Message) << "Inversions done" << std::endl;
result.Vamp.resize(Gamma::nGamma/2);
for( int mu=0; mu < Gamma::nGamma/2; mu++){
Gamma::Algebra gam = mu;
result.Vamp[mu] = 1/12.0*trace(adj(Gamma(mu*2+1))*g5*Sout_inv*g5*vertex[mu]*Sin_inv);
LOG(Message) << "Vamp[" << mu << "] - " << result.Vamp[mu] << std::endl;
}
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_Amputate_hpp_

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/Bilinear.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MNPR/Bilinear.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MNPR;
template class Grid::Hadrons::MNPR::TBilinear<FIMPL,FIMPL>;

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@ -1,225 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/Bilinear.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Julia Kettle J.R.Kettle-2@sms.ed.ac.uk
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_Bilinear_hpp_
#define Hadrons_Bilinear_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/ModuleFactory.hpp>
//#include <Grid/qcd/utils/PropagatorUtils.h>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* TBilinear *
Performs bilinear contractions of the type tr[g5*adj(Sout)*g5*G*Sin]
Suitable for non exceptional momenta in Rome-Southampton NPR
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MNPR)
class BilinearPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(BilinearPar,
std::string, Sin,
std::string, Sout,
std::string, pin,
std::string, pout,
std::string, output);
};
template <typename FImpl1, typename FImpl2>
class TBilinear: public Module<BilinearPar>
{
public:
FERM_TYPE_ALIASES(FImpl1, 1);
FERM_TYPE_ALIASES(FImpl2, 2);
class Result: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<SpinColourMatrix>, bilinear);
};
public:
// constructor
TBilinear(const std::string name);
// destructor
virtual ~TBilinear(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
//LatticeSpinColourMatrix PhaseProps(LatticeSpinColourMatrix S, std::vector<Real> p);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(Bilinear, ARG(TBilinear<FIMPL, FIMPL>), MNPR);
/******************************************************************************
* TBilinear implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
TBilinear<FImpl1, FImpl2>::TBilinear(const std::string name)
: Module<BilinearPar>(name)
{}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
void TBilinear<FImpl1, FImpl2>::setup(void)
{
//env().template registerLattice<LatticeSpinColourMatrix>(getName());
//env().template registerObject<SpinColourMatrix>(getName());
}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TBilinear<FImpl1, FImpl2>::getInput(void)
{
std::vector<std::string> input = {par().Sin, par().Sout};
return input;
}
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TBilinear<FImpl1, FImpl2>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
/*
/////Phase propagators//////////////////////////
template <typename FImpl1, typename FImpl2>
LatticeSpinColourMatrix TBilinear<FImpl1, FImpl2>::PhaseProps(LatticeSpinColourMatrix S, std::vector<Real> p)
{
GridBase *grid = S._grid;
LatticeComplex pdotx(grid), coor(grid);
std::vector<int> latt_size = grid->_fdimensions;
Complex Ci(0.0,1.0);
pdotx=zero;
for (unsigned int mu = 0; mu < 4; ++mu)
{
Real TwoPiL = M_PI * 2.0/ latt_size[mu];
LatticeCoordinate(coor,mu);
pdotx = pdotx +(TwoPiL * p[mu]) * coor;
}
S = S*exp(-Ci*pdotx);
return S;
}
*/
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
void TBilinear<FImpl1, FImpl2>::execute(void)
{
/**************************************************************************
Compute the bilinear vertex needed for the NPR.
V(G) = sum_x [ g5 * adj(S'(x,p2)) * g5 * G * S'(x,p1) ]_{si,sj,ci,cj}
G is one of the 16 gamma vertices [I,gmu,g5,g5gmu,sig(mu,nu)]
* G
/ \
p1/ \p2
/ \
/ \
Returns a spin-colour matrix, with indices si,sj, ci,cj
Conventions:
p1 - incoming momenta
p2 - outgoing momenta
q = (p1-p2)
**************************************************************************/
LOG(Message) << "Computing bilinear contractions '" << getName() << "' using"
<< " momentum '" << par().Sin << "' and '" << par().Sout << "'"
<< std::endl;
BinaryWriter writer(par().output);
// Propogators
LatticeSpinColourMatrix &Sin = *env().template getObject<LatticeSpinColourMatrix>(par().Sin);
LatticeSpinColourMatrix &Sout = *env().template getObject<LatticeSpinColourMatrix>(par().Sout);
LatticeComplex pdotxin(env().getGrid()), pdotxout(env().getGrid()), coor(env().getGrid());
// momentum on legs
std::vector<Real> pin = strToVec<Real>(par().pin), pout = strToVec<Real>(par().pout);
std::vector<Real> latt_size(pin.begin(), pin.end());
//bilinears
LatticeSpinColourMatrix bilinear_x(env().getGrid());
SpinColourMatrix bilinear;
Gamma g5(Gamma::Algebra::Gamma5);
Result result;
Complex Ci(0.0,1.0);
//
pdotxin=zero;
pdotxout=zero;
for (unsigned int mu = 0; mu < 4; ++mu)
{
Real TwoPiL = M_PI * 2.0/ latt_size[mu];
LatticeCoordinate(coor,mu);
pdotxin = pdotxin +(TwoPiL * pin[mu]) * coor;
pdotxout= pdotxout +(TwoPiL * pout[mu]) * coor;
}
Sin = Sin*exp(-Ci*pdotxin); //phase corrections
Sout = Sout*exp(-Ci*pdotxout);
////Set up gamma vector//////////////////////////
std::vector<Gamma> gammavector;
for( int i=0; i<Gamma::nGamma; i++){
Gamma::Algebra gam = i;
gammavector.push_back(Gamma(gam));
}
result.bilinear.resize(Gamma::nGamma);
/////////////////////////////////////////////////
//LatticeSpinMatrix temp = g5*Sout;
////////Form Vertex//////////////////////////////
for (int i=0; i < Gamma::nGamma; i++){
bilinear_x = g5*adj(Sout)*g5*gammavector[i]*Sin;
result.bilinear[i] = sum(bilinear_x); //sum over lattice sites
}
//////////////////////////////////////////////////
write(writer, par().output, result.bilinear);
LOG(Message) << "Complete. Writing results to " << par().output << std:: endl;
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_Bilinear_hpp_

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@ -1,36 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/FourQuark.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MNPR/FourQuark.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MNPR;
template class Grid::Hadrons::MNPR::TFourQuark<FIMPL,FIMPL>;

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@ -1,274 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNPR/FourQuark.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Julia Kettle J.R.Kettle-2@sms.ed.ac.uk
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_FourQuark_hpp_
#define Hadrons_FourQuark_hpp_
#include <typeinfo>
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Grid/serialisation/Serialisation.h>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* TFourQuark *
Performs fourquark contractions of the type tr[g5*adj(Sout)*g5*G*Sin]
Suitable for non exceptional momenta
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MNPR)
class FourQuarkPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(FourQuarkPar,
std::string, Sin, //need to make this a propogator type?
std::string, Sout, //same
std::string, pin,
std::string, pout,
bool, fullbasis,
std::string, output);
};
template <typename FImpl1, typename FImpl2>
class TFourQuark: public Module<FourQuarkPar>
{
public:
FERM_TYPE_ALIASES(FImpl1, 1);
FERM_TYPE_ALIASES(FImpl2, 2);
class Result: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(Result,
std::vector<SpinColourSpinColourMatrix>, fourquark);
};
public:
// constructor
TFourQuark(const std::string name);
// destructor
virtual ~TFourQuark(void) {};
// dependencies/products
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void tensorprod(LatticeSpinColourSpinColourMatrix &lret, LatticeSpinColourMatrix a, LatticeSpinColourMatrix b);
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(FourQuark, ARG(TFourQuark<FIMPL, FIMPL>), MNPR);
/******************************************************************************
* TFourQuark implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
TFourQuark<FImpl1, FImpl2>::TFourQuark(const std::string name)
: Module<FourQuarkPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TFourQuark<FImpl1, FImpl2>::getInput(void)
{
std::vector<std::string> input = {par().Sin, par().Sout};
return input;
}
template <typename FImpl1, typename FImpl2>
std::vector<std::string> TFourQuark<FImpl1, FImpl2>::getOutput(void)
{
std::vector<std::string> output = {getName()};
return output;
}
template <typename FImpl1, typename FImpl2>
void TFourQuark<FImpl1, FImpl2>::tensorprod(LatticeSpinColourSpinColourMatrix &lret, LatticeSpinColourMatrix a, LatticeSpinColourMatrix b)
{
#if 0
parallel_for(auto site=lret.begin();site<lret.end();site++) {
for (int si; si < 4; ++si){
for(int sj; sj <4; ++sj){
for (int ci; ci < 3; ++ci){
for (int cj; cj < 3; ++cj){
for (int sk; sk < 4; ++sk){
for(int sl; sl <4; ++sl){
for (int ck; ck < 3; ++ck){
for (int cl; cl < 3; ++cl){
lret[site]()(si,sj)(ci,cj)(sk,sl)(ck,cl)=a[site]()(si,sj)(ci,cj)*b[site]()(sk,sl)(ck,cl);
}}
}}
}}
}}
}
#else
// FIXME ; is there a general need for this construct ? In which case we should encapsulate the
// below loops in a helper function.
//LOG(Message) << "sp co mat a is - " << a << std::endl;
//LOG(Message) << "sp co mat b is - " << b << std::endl;
parallel_for(auto site=lret.begin();site<lret.end();site++) {
vTComplex left;
for(int si=0; si < Ns; ++si){
for(int sj=0; sj < Ns; ++sj){
for (int ci=0; ci < Nc; ++ci){
for (int cj=0; cj < Nc; ++cj){
//LOG(Message) << "si, sj, ci, cj - " << si << ", " << sj << ", "<< ci << ", "<< cj << std::endl;
left()()() = a[site]()(si,sj)(ci,cj);
//LOG(Message) << left << std::endl;
lret[site]()(si,sj)(ci,cj)=left()*b[site]();
}}
}}
}
#endif
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
void TFourQuark<FImpl1, FImpl2>::setup(void)
{
envCreateLat(LatticeSpinColourMatrix, getName());
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl1, typename FImpl2>
void TFourQuark<FImpl1, FImpl2>::execute(void)
{
/*********************************************************************************
TFourQuark : Creates the four quark vertex required for the NPR of four-quark ops
V_{Gamma_1,Gamma_2} = sum_x [ ( g5 * adj(S'(x,p2)) * g5 * G1 * S'(x,p1) )_ci,cj;si,sj x ( g5 * adj(S'(x,p2)) * g5 * G2 S'(x,p1) )_ck,cl;sk,cl ]
Create a bilinear vertex for G1 and G2 the spin and colour indices are kept free. Where there are 16 potential Gs.
We then find the outer product of V1 and V2, keeping the spin and colour indices uncontracted
Then this is summed over the lattice coordinate
Result is a SpinColourSpinColourMatrix - with 4 colour and 4 spin indices.
We have up to 256 of these including the offdiag (G1 != G2).
\ /
\p1 p1/
\ /
\ /
G1 * * G2
/ \
/ \
/p2 p2\
/ \
*********************************************************************************/
LOG(Message) << "Computing fourquark contractions '" << getName() << "' using"
<< " momentum '" << par().Sin << "' and '" << par().Sout << "'"
<< std::endl;
BinaryWriter writer(par().output);
PropagatorField1 &Sin = *env().template getObject<PropagatorField1>(par().Sin);
PropagatorField2 &Sout = *env().template getObject<PropagatorField2>(par().Sout);
std::vector<Real> pin = strToVec<Real>(par().pin), pout = strToVec<Real>(par().pout);
bool fullbasis = par().fullbasis;
Gamma g5(Gamma::Algebra::Gamma5);
Result result;
std::vector<Real> latt_size(pin.begin(), pin.end());
LatticeComplex pdotxin(env().getGrid()), pdotxout(env().getGrid()), coor(env().getGrid());
LatticeSpinColourMatrix bilinear_mu(env().getGrid()), bilinear_nu(env().getGrid());
LatticeSpinColourSpinColourMatrix lret(env().getGrid());
Complex Ci(0.0,1.0);
//Phase propagators
//Sin = Grid::QCD::PropUtils::PhaseProps(Sin,pin);
//Sout = Grid::QCD::PropUtils::PhaseProps(Sout,pout);
//find p.x for in and out so phase can be accounted for in propagators
pdotxin=zero;
pdotxout=zero;
for (unsigned int mu = 0; mu < 4; ++mu)
{
Real TwoPiL = M_PI * 2.0/ latt_size[mu];
LatticeCoordinate(coor,mu);
pdotxin = pdotxin +(TwoPiL * pin[mu]) * coor;
pdotxout= pdotxout +(TwoPiL * pout[mu]) * coor;
}
Sin = Sin*exp(-Ci*pdotxin); //phase corrections
Sout = Sout*exp(-Ci*pdotxout);
//Set up Gammas
std::vector<Gamma> gammavector;
for( int i=1; i<Gamma::nGamma; i+=2){
Gamma::Algebra gam = i;
gammavector.push_back(Gamma(gam));
}
lret = zero;
if (fullbasis == true){ // all combinations of mu and nu
result.fourquark.resize(Gamma::nGamma/2*Gamma::nGamma/2);
for( int mu=0; mu<Gamma::nGamma/2; mu++){
bilinear_mu = g5*adj(Sout)*g5*gammavector[mu]*Sin;
for ( int nu=0; nu<Gamma::nGamma; nu++){
LatticeSpinColourMatrix bilinear_nu(env().getGrid());
bilinear_nu = g5*adj(Sout)*g5*gammavector[nu]*Sin;
LOG(Message) << "bilinear_nu for nu = " << nu << " is - " << bilinear_mu << std::endl;
result.fourquark[mu*Gamma::nGamma/2 + nu] = zero;
tensorprod(lret,bilinear_mu,bilinear_nu);
result.fourquark[mu*Gamma::nGamma/2 + nu] = sum(lret);
}
}
} else {
result.fourquark.resize(Gamma::nGamma/2);
for ( int mu=0; mu<1; mu++){
//for( int mu=0; mu<Gamma::nGamma/2; mu++ ){
bilinear_mu = g5*adj(Sout)*g5*gammavector[mu]*Sin;
//LOG(Message) << "bilinear_mu for mu = " << mu << " is - " << bilinear_mu << std::endl;
result.fourquark[mu] = zero;
tensorprod(lret,bilinear_mu,bilinear_mu); //tensor outer product
result.fourquark[mu] = sum(lret);
}
}
write(writer, "fourquark", result.fourquark);
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_FourQuark_hpp_

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@ -1,37 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNoise/FullVolumeSpinColorDiagonal.cc
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#include <Hadrons/Modules/MNoise/FullVolumeSpinColorDiagonal.hpp>
using namespace Grid;
using namespace Hadrons;
using namespace MNoise;
template class Grid::Hadrons::MNoise::TFullVolumeSpinColorDiagonal<FIMPL>;
template class Grid::Hadrons::MNoise::TFullVolumeSpinColorDiagonal<ZFIMPL>;

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@ -1,122 +0,0 @@
/*************************************************************************************
Grid physics library, www.github.com/paboyle/Grid
Source file: Hadrons/Modules/MNoise/FullVolumeSpinColorDiagonal.hpp
Copyright (C) 2015-2019
Author: Antonin Portelli <antonin.portelli@me.com>
Author: Vera Guelpers <Vera.Guelpers@ed.ac.uk>
Author: Vera Guelpers <vmg1n14@soton.ac.uk>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License along
with this program; if not, write to the Free Software Foundation, Inc.,
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
See the full license in the file "LICENSE" in the top level distribution directory
*************************************************************************************/
/* END LEGAL */
#ifndef Hadrons_MNoise_FullVolumeSpinColorDiagonal_hpp_
#define Hadrons_MNoise_FullVolumeSpinColorDiagonal_hpp_
#include <Hadrons/Global.hpp>
#include <Hadrons/Module.hpp>
#include <Hadrons/ModuleFactory.hpp>
#include <Hadrons/DilutedNoise.hpp>
BEGIN_HADRONS_NAMESPACE
/******************************************************************************
* Generate full volume spin-color diagonal noise *
******************************************************************************/
BEGIN_MODULE_NAMESPACE(MNoise)
class FullVolumeSpinColorDiagonalPar: Serializable
{
public:
GRID_SERIALIZABLE_CLASS_MEMBERS(FullVolumeSpinColorDiagonalPar,
unsigned int, nsrc);
};
template <typename FImpl>
class TFullVolumeSpinColorDiagonal: public Module<FullVolumeSpinColorDiagonalPar>
{
public:
FERM_TYPE_ALIASES(FImpl,);
public:
// constructor
TFullVolumeSpinColorDiagonal(const std::string name);
// destructor
virtual ~TFullVolumeSpinColorDiagonal(void) {};
// dependency relation
virtual std::vector<std::string> getInput(void);
virtual std::vector<std::string> getOutput(void);
// setup
virtual void setup(void);
// execution
virtual void execute(void);
};
MODULE_REGISTER_TMP(FullVolumeSpinColorDiagonal, TFullVolumeSpinColorDiagonal<FIMPL>, MNoise);
MODULE_REGISTER_TMP(ZFullVolumeSpinColorDiagonal, TFullVolumeSpinColorDiagonal<ZFIMPL>, MNoise);
/******************************************************************************
* TFullVolumeSpinColorDiagonal implementation *
******************************************************************************/
// constructor /////////////////////////////////////////////////////////////////
template <typename FImpl>
TFullVolumeSpinColorDiagonal<FImpl>::TFullVolumeSpinColorDiagonal(const std::string name)
: Module<FullVolumeSpinColorDiagonalPar>(name)
{}
// dependencies/products ///////////////////////////////////////////////////////
template <typename FImpl>
std::vector<std::string> TFullVolumeSpinColorDiagonal<FImpl>::getInput(void)
{
std::vector<std::string> in;
return in;
}
template <typename FImpl>
std::vector<std::string> TFullVolumeSpinColorDiagonal<FImpl>::getOutput(void)
{
std::vector<std::string> out = {getName()};
return out;
}
// setup ///////////////////////////////////////////////////////////////////////
template <typename FImpl>
void TFullVolumeSpinColorDiagonal<FImpl>::setup(void)
{
envCreateDerived(DilutedNoise<FImpl>,
FullVolumeSpinColorDiagonalNoise<FImpl>,
getName(), 1, envGetGrid(FermionField), par().nsrc);
}
// execution ///////////////////////////////////////////////////////////////////
template <typename FImpl>
void TFullVolumeSpinColorDiagonal<FImpl>::execute(void)
{
auto &noise = envGet(DilutedNoise<FImpl>, getName());
LOG(Message) << "Generating full volume, spin-color diagonal noise" << std::endl;
noise.generateNoise(rng4d());
}
END_MODULE_NAMESPACE
END_HADRONS_NAMESPACE
#endif // Hadrons_MNoise_FullVolumeSpinColorDiagonal_hpp_

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