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resample: output dir option

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This commit is contained in:
Antonin Portelli 2014-10-21 17:36:02 +01:00
parent 89cf008fb8
commit 4506e1689c
1 changed files with 14 additions and 9 deletions
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23
utils/resample.cpp
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@ -34,7 +34,7 @@ using namespace Latan;
static void usage(const string &cmdName)
{
cerr << "usage: " << cmdName;
cerr << " [-n <nsample> -b <bin size> -r <state>]";
cerr << " [-n <nsample> -b <bin size> -r <state> -o <output dir>]";
cerr << " <data list> <name list>";
cerr << endl;
exit(EXIT_FAILURE);
@ -44,12 +44,12 @@ int main(int argc, char *argv[])
{
// argument parsing ////////////////////////////////////////////////////////
int c;
string manFileName, nameFileName, stateFileName, cmdName;
string manFileName, nameFileName, stateFileName, cmdName, outDirName = ".";
Index binSize = 1, nSample = DEF_NSAMPLE;
opterr = 0;
cmdName = basename(argv[0]);
while ((c = getopt(argc, argv, "b:n:r:")) != -1)
while ((c = getopt(argc, argv, "b:n:r:o:")) != -1)
{
switch (c)
{
@ -59,6 +59,9 @@ int main(int argc, char *argv[])
case 'n':
nSample = strTo<Index>(optarg);
break;
case 'o':
outDirName = optarg;
break;
case 'r':
stateFileName = optarg;
break;
@ -89,10 +92,11 @@ int main(int argc, char *argv[])
cout << "================================================" << endl;
cout << "Data resampler" << endl;
cout << "------------------------------------------------" << endl;
cout << " #file= " << dataFileName.size() << endl;
cout << " #name= " << name.size() << endl;
cout << " bin size= " << binSize << endl;
cout << " #sample= " << nSample << endl;
cout << " #file= " << dataFileName.size() << endl;
cout << " #name= " << name.size() << endl;
cout << " bin size= " << binSize << endl;
cout << " #sample= " << nSample << endl;
cout << "output dir: " << outDirName << endl;
cout << "------------------------------------------------" << endl;
// data loading ////////////////////////////////////////////////////////////
@ -129,7 +133,7 @@ int main(int argc, char *argv[])
}
for (unsigned int i = 0; i < name.size(); ++i)
{
const string outFileName = name[i] + "_" + manFileName + ".boot";
const string outFileName = name[i] + "_" + manFileName + ".sample";
cout << '\r' << ProgressBar(i + 1, name.size());
data[name[i]].bin(binSize);
@ -138,7 +142,8 @@ int main(int argc, char *argv[])
g.setState(state);
}
s = data[name[i]].bootstrapMean(nSample, g);
Io::save<DMatSample, AsciiFile>(s, outFileName);
Io::save<DMatSample, AsciiFile>(s, outDirName + "/" + outFileName,
File::Mode::write, outFileName);
}
cout << endl;