Peter Boyle
|
7a61feb6d3
|
Allocator added with caching for Linux VM subsystem optimisation
|
2016-12-08 16:58:01 +00:00 |
|
Peter Boyle
|
69ae817d1c
|
Updates for supporting Mobius better
|
2016-12-08 16:43:28 +00:00 |
|
Guido Cossu
|
2bd4233919
|
Completed testing of the HMC for Ls vectorised version (on AVX2)
|
2016-12-07 04:56:37 +00:00 |
|
Guido Cossu
|
143c70e29f
|
Debugged the threaded version. Cleaning up
|
2016-12-07 04:40:25 +00:00 |
|
|
|
51322da6f8
|
Hadrons: genetic scheduler improvement
|
2016-12-07 09:00:45 +09:00 |
|
|
|
c56707e003
|
useless debug message removed
|
2016-12-07 08:59:20 +09:00 |
|
Guido Cossu
|
b812d5e39c
|
Added single threaded version of the derivative for the Ls vectorised DWF
|
2016-12-06 16:31:13 +00:00 |
|
Guido Cossu
|
01480da0a8
|
Merge branch 'develop' into feature/hmc_generalise
|
2016-12-05 05:10:27 +00:00 |
|
Peter Boyle
|
e27c6b217c
|
Updating
|
2016-12-01 12:42:53 +00:00 |
|
|
|
9ad3d3453e
|
Hadrons is now a library, the previous XML driven program is now a test
|
2016-12-01 21:36:29 +09:00 |
|
paboyle
|
6adf35da54
|
Faster Mobius
|
2016-12-01 11:39:04 +00:00 |
|
paboyle
|
bd0430b34f
|
Serialisation in malloc fixed
|
2016-11-29 22:27:55 +00:00 |
|
paboyle
|
4704f2d009
|
Actions updated
|
2016-11-29 00:14:36 +00:00 |
|
Guido Cossu
|
ae9688e343
|
Reporting also the total mflops
|
2016-11-28 11:37:02 +00:00 |
|
|
|
43928846f2
|
first steps to make Hadrons a library
|
2016-11-28 16:02:15 +09:00 |
|
|
|
fabcd4179d
|
Hadrons: propagator type coming from the fermion implementation
|
2016-11-28 14:02:10 +09:00 |
|
|
|
a8843c9af6
|
Code cleaning, the fermion implementation can be sepcified using the macro FIMPL
|
2016-11-27 16:47:22 +09:00 |
|
|
|
7a1a7a685e
|
Merge branch 'feature/fft-opt' into feature/hadrons
|
2016-11-27 15:32:03 +09:00 |
|
Lanny91
|
b18950f776
|
Added simd real divide test with QPX divide fixes
|
2016-11-25 13:21:33 +00:00 |
|
Lanny91
|
0acbf77bc6
|
Add QPX Div structure
|
2016-11-24 13:24:12 +00:00 |
|
|
|
5833f247fa
|
more FFt optimisations
|
2016-11-24 09:09:48 +09:00 |
|
|
|
a2cffb0304
|
AVXFMA target fixed
|
2016-11-21 17:47:18 +01:00 |
|
|
|
97cddda49e
|
Merge branch 'feature/gen-simd' into feature/doxygen
# Conflicts:
# Makefile.am
# configure.ac
|
2016-11-19 13:11:13 +01:00 |
|
|
|
b873504b90
|
fully generic SIMD
|
2016-11-19 01:32:39 +01:00 |
|
Guido Cossu
|
62749d05a6
|
Naming the scalar action
|
2016-11-17 12:26:20 +00:00 |
|
Guido Cossu
|
3834feb4b7
|
Adding action names
|
2016-11-16 16:46:49 +00:00 |
|
|
|
042ae5b87c
|
generic 256bits SIMD
|
2016-11-15 12:16:15 +00:00 |
|
Guido Cossu
|
a783282b8b
|
Merge branch 'develop' into feature/hmc_generalise
|
2016-11-10 18:13:07 +00:00 |
|
paboyle
|
604f0ea2f6
|
Merge branch 'develop' into release/v0.6.0
|
2016-11-09 04:13:01 -08:00 |
|
paboyle
|
33dc1f51b5
|
Final sign off commits from Cori-1
|
2016-11-09 04:11:03 -08:00 |
|
|
|
13a8997789
|
Merge branch 'release/v0.6.0' into feature/hadrons
# Conflicts:
# Makefile.am
|
2016-11-08 20:43:39 +00:00 |
|
|
|
9576f0903d
|
namespace fix
|
2016-11-08 19:07:47 +00:00 |
|
|
|
8a5e3a917c
|
Merge branch 'develop' into release/v0.6.0
# Conflicts:
# tests/core/Test_fft_gfix.cc
|
2016-11-08 16:53:42 +00:00 |
|
|
|
3d2a22a14d
|
include fix for MKL
|
2016-11-08 15:31:47 +00:00 |
|
azusayamaguchi
|
f85b35314d
|
Fix a routine for single node processor coor from rank
|
2016-11-08 11:49:13 +00:00 |
|
azusayamaguchi
|
0cff8754d1
|
Usecs
|
2016-11-08 11:35:41 +00:00 |
|
azusayamaguchi
|
692b44dac1
|
Merge branch 'develop' into release/v0.6.0
|
2016-11-04 22:48:11 +00:00 |
|
azusayamaguchi
|
96ba42a297
|
omm buf
|
2016-11-04 22:47:25 +00:00 |
|
azusayamaguchi
|
f7b60004f3
|
Merge branch 'develop' into release/v0.6.0
|
2016-11-04 16:08:07 +00:00 |
|
|
|
ad971ca07b
|
fftw3.h is now expected to be an external header
|
2016-11-04 13:12:35 +00:00 |
|
|
|
f2f16eb972
|
fftw3.h removed, please don't commit this file back
|
2016-11-04 13:11:05 +00:00 |
|
azusayamaguchi
|
b7d55f7dfb
|
Fix a typo in reorg of the --dslash-asm
|
2016-11-04 11:35:08 +00:00 |
|
azusayamaguchi
|
6e548a8ad5
|
Linux compile needed
|
2016-11-04 11:34:16 +00:00 |
|
|
|
a5dd4a9bab
|
Merge branch 'feature/fft-opt' into develop
|
2016-11-03 14:34:46 +00:00 |
|
|
|
ec232af851
|
Photon.h references removed
|
2016-11-03 14:34:16 +00:00 |
|
|
|
17e30281e9
|
Merge branch 'develop' into feature/fft-opt
# Conflicts:
# lib/FFT.h
|
2016-11-03 14:14:03 +00:00 |
|
|
|
aee44dc694
|
Photon.h removed from develop branch
|
2016-11-03 13:54:15 +00:00 |
|
|
|
75bbf6a0af
|
Merge branch 'develop' into feature/feynman-rules
|
2016-11-03 13:52:11 +00:00 |
|
paboyle
|
111bfbc6bc
|
notimestamp by default
|
2016-11-03 11:40:26 +00:00 |
|
paboyle
|
f41a230b32
|
Decrease mpi3l verbose
|
2016-11-02 19:54:03 +00:00 |
|
paboyle
|
c067051d5f
|
Merge branch 'develop' into release/v0.6.0
|
2016-11-02 13:59:18 +00:00 |
|
paboyle
|
9e2ec2719b
|
Merge branch 'develop' into feature/mpi3-master-slave
|
2016-11-02 13:02:56 +00:00 |
|
paboyle
|
757a928f9a
|
Improvement to use own SHM_OPEN call to avoid openmpi bug.
|
2016-11-02 12:37:46 +00:00 |
|
Guido Cossu
|
bc248b6948
|
Merge branch 'release/v0.6.0' into feature/KNL_double_prec
Conflicts:
lib/simd/Grid_avx512.h
|
2016-11-02 10:40:49 +00:00 |
|
Guido Cossu
|
ae8561892e
|
Eliminating useless defines
|
2016-11-02 10:21:06 +00:00 |
|
paboyle
|
32375aca65
|
Semaphore sleep/wake up on remote processes.
|
2016-11-02 09:27:20 +00:00 |
|
paboyle
|
bb94ddd0eb
|
Tidy up of mpi3; also some cleaning of the dslash controls.
|
2016-11-02 08:07:09 +00:00 |
|
James Harrison
|
7f0fc0eff5
|
Remove explicit use of double-precision types in photon.h
|
2016-11-01 16:02:35 +00:00 |
|
paboyle
|
791cb050c8
|
Comms improvements
|
2016-11-01 11:35:43 +00:00 |
|
|
|
d5e95bc350
|
Merge branch 'release/v0.6.0' into feature/feynman-rules
|
2016-10-31 18:36:21 +00:00 |
|
|
|
7a84906b5f
|
Merge branch 'release/v0.6.0' into feature/fft-opt
|
2016-10-31 18:31:49 +00:00 |
|
|
|
66d832c733
|
FFTW header fix
|
2016-10-31 16:39:29 +00:00 |
|
|
|
e74417ca12
|
big build system polish
|
2016-10-31 16:31:27 +00:00 |
|
Guido Cossu
|
e8c3174ae2
|
Small change in the defines
|
2016-10-30 12:23:11 +00:00 |
|
Guido Cossu
|
9b066e94d0
|
Compilation with both single and double precision
|
2016-10-30 12:04:06 +00:00 |
|
James Harrison
|
618abdf302
|
Add missing volume factor in stochastic QED field
|
2016-10-29 11:04:02 +01:00 |
|
Guido Cossu
|
e1042aef77
|
First version of the doube prec for testing purposes
It does not compile single and double version at the same time
|
2016-10-28 17:20:04 +01:00 |
|
paboyle
|
aa6a839c60
|
avx512 build fix; detect clang/gcc intrinsics vs. ICPC
|
2016-10-28 09:13:09 +01:00 |
|
|
|
b4d2af8c89
|
threaded FFT
|
2016-10-26 19:46:36 +01:00 |
|
|
|
434af6aeaa
|
Merge branch 'develop' into feature/fft-opt
|
2016-10-26 18:50:38 +01:00 |
|
|
|
e90f8ac841
|
Merge branch 'develop' into feature/feynman-rules
|
2016-10-26 18:50:21 +01:00 |
|
|
|
a1705a8d53
|
debug message removed
|
2016-10-26 18:50:07 +01:00 |
|
|
|
ca21003f01
|
Merge branch 'feature/fft-opt' into feature/feynman-rules
# Conflicts:
# lib/FFT.h
# lib/qcd/action/fermion/WilsonFermion5D.h
# tests/core/Test_fft.cc
|
2016-10-26 18:44:47 +01:00 |
|
|
|
14ddf2c234
|
more FFT optimisations
|
2016-10-26 17:36:26 +01:00 |
|
Guido Cossu
|
1d666771f9
|
Debugging the RNG, eliminate the barrier after broadcast
|
2016-10-26 16:08:23 +01:00 |
|
Guido Cossu
|
d50055cd96
|
Making the ILDG support optional
|
2016-10-26 09:48:01 +01:00 |
|
Azusa Yamaguchi
|
bca861e112
|
Note:FFT shoud be GridFFT (Not change yet).
Gauge fix with FFt is added (tests/core)
|
2016-10-25 14:21:48 +01:00 |
|
|
|
33d199a0ad
|
temporary thread safety in FFT
|
2016-10-25 12:56:40 +01:00 |
|
paboyle
|
b820076b91
|
Merge branch 'develop' into feature/mpi3
|
2016-10-25 06:02:33 +01:00 |
|
paboyle
|
09f66100d3
|
MPI 3 compile on non-linux
|
2016-10-25 06:01:12 +01:00 |
|
azusayamaguchi
|
d7d92af09d
|
Travis fail fix attempt
|
2016-10-25 01:45:53 +01:00 |
|
azusayamaguchi
|
460d0753a1
|
Merge branch 'develop' into feature/mpi3
Conflicts:
lib/simd/Grid_avx512.h
|
2016-10-25 01:08:51 +01:00 |
|
azusayamaguchi
|
8f8058f8a5
|
More random bits on parallel seeding
|
2016-10-25 01:05:52 +01:00 |
|
azusayamaguchi
|
d97a27f483
|
Verbose
|
2016-10-25 01:05:31 +01:00 |
|
azusayamaguchi
|
7c3363b91e
|
Compiles all comms targets
|
2016-10-25 00:04:17 +01:00 |
|
azusayamaguchi
|
b94478fa51
|
mpi, mpi3, shmem all compile.
mpi, mpi3 pass single node multi-rank
|
2016-10-24 23:45:31 +01:00 |
|
Guido Cossu
|
47c7159177
|
ILDG reader/writer works
Fill the xml header with the required information, todo.
|
2016-10-24 21:57:54 +01:00 |
|
|
|
13bf0482e3
|
FFT optimisation
|
2016-10-24 19:25:40 +01:00 |
|
|
|
a795b5705e
|
memory optimisation
|
2016-10-24 19:25:15 +01:00 |
|
|
|
392e064513
|
fast local peek-poke
|
2016-10-24 19:24:21 +01:00 |
|
azusayamaguchi
|
b6a65059a2
|
Update to use shared memory to contain the stencil comms buffers
Tested on 2.1.1.1 1.2.1.1 4.1.1.1 1.4.1.1 2.2.1.1 subnode decompositions
|
2016-10-24 17:30:43 +01:00 |
|
Guido Cossu
|
f415db583a
|
Adding ILDG format
|
2016-10-24 15:48:22 +01:00 |
|
Guido Cossu
|
f55c16f984
|
Adding a barrier in the RNG save
|
2016-10-24 11:02:14 +01:00 |
|
azusayamaguchi
|
ea25a4d9ac
|
Works
|
2016-10-23 06:10:05 +01:00 |
|
azusayamaguchi
|
c190221fd3
|
Internal SHM comms in non-simd directions working
Need to fix simd directions
|
2016-10-22 18:14:27 +01:00 |
|
Guido Cossu
|
df67e013ca
|
More debug output for the RNG
|
2016-10-22 13:34:17 +01:00 |
|
Guido Cossu
|
3e990c9d0a
|
Reverting the broadcast change
|
2016-10-22 13:26:43 +01:00 |
|
Guido Cossu
|
4b740fc8fd
|
Debugging the RNG state save
|
2016-10-22 13:06:00 +01:00 |
|
azusayamaguchi
|
0fcd2e7188
|
Simplify the comms structure prior to implementing Shared memory direct bouncs
|
2016-10-21 22:44:10 +01:00 |
|
azusayamaguchi
|
910b8dd6a1
|
use simd type
|
2016-10-21 22:35:29 +01:00 |
|
azusayamaguchi
|
75ebd3a0d1
|
Typo fixes and rotate for CLANG
|
2016-10-21 22:34:29 +01:00 |
|
Guido Cossu
|
cccd14b09e
|
Small cleanup
|
2016-10-21 17:20:54 +01:00 |
|
Guido Cossu
|
e6acffdfc2
|
Fixing the plaquette computation
|
2016-10-21 16:06:34 +01:00 |
|
|
|
7c8f79b147
|
more stochastic QED fixes
|
2016-10-21 15:20:12 +01:00 |
|
azusayamaguchi
|
09fd5c43a7
|
Reasonably fast version
|
2016-10-21 15:17:39 +01:00 |
|
|
|
462921e549
|
QED: fix stochastic field
|
2016-10-21 14:41:08 +01:00 |
|
Guido Cossu
|
392130a537
|
Working on the 5d
|
2016-10-21 14:22:25 +01:00 |
|
azusayamaguchi
|
f22317748f
|
Merge branch 'feature/mpi3' of https://github.com/paboyle/Grid into feature/mpi3
|
2016-10-21 13:36:35 +01:00 |
|
azusayamaguchi
|
6a9eae6b6b
|
Reporting improvements
|
2016-10-21 13:36:18 +01:00 |
|
azusayamaguchi
|
fad96cf250
|
StencilBufs
|
2016-10-21 13:36:00 +01:00 |
|
azusayamaguchi
|
f331809c27
|
Use variable type for loop
|
2016-10-21 13:35:37 +01:00 |
|
|
|
bd6a228af6
|
Merge commit '20a091c3eddfdb67a82ece6413740a93650a2f98' into feature/feynman-rules
|
2016-10-21 13:10:30 +01:00 |
|
|
|
63d219498b
|
first (dirty) implementation of Feynman stoctachtic EM field
|
2016-10-21 13:10:13 +01:00 |
|
paboyle
|
2c54a53d0a
|
Compile verbose reduce
|
2016-10-21 12:12:14 +01:00 |
|
paboyle
|
306160ad9a
|
bcopy threaded
|
2016-10-21 12:07:28 +01:00 |
|
azusayamaguchi
|
20a091c3ed
|
Intel vs. Clang intrinsics differences absorbed
|
2016-10-21 09:08:36 +01:00 |
|
azusayamaguchi
|
202078eb1b
|
Cray / OpenSHMEM ordering differs
|
2016-10-21 09:07:20 +01:00 |
|
paboyle
|
a762b1fb71
|
MPI3 working with a bounce through shared memory on my laptop.
Longer term plan: make the "u_comm_buf" in Stencil point to the shared region and avoid the
send between ranks on same node.
|
2016-10-21 09:03:26 +01:00 |
|
Guido Cossu
|
deef2673b2
|
Separating the Lattice theories stub from the QCD.h file
|
2016-10-20 17:24:08 +01:00 |
|
paboyle
|
5b5925b8e5
|
Forgot to add
|
2016-10-20 17:09:40 +01:00 |
|
Guido Cossu
|
977b0a6dd9
|
Merge branch 'develop' into feature/hmc_generalise
|
2016-10-20 17:04:41 +01:00 |
|
Guido Cossu
|
977d844394
|
Few modifications on stdout messages
|
2016-10-20 17:01:59 +01:00 |
|
paboyle
|
b58adc6a4b
|
commVector
|
2016-10-20 17:00:15 +01:00 |
|
paboyle
|
f9d5e95d72
|
allocator template typedefs moved to AlignedAllocator
|
2016-10-20 16:59:39 +01:00 |
|
paboyle
|
4f8e636a43
|
commVector
|
2016-10-20 16:59:16 +01:00 |
|
paboyle
|
9b39f35ae6
|
commVector different for SHMEM compat
|
2016-10-20 16:58:53 +01:00 |
|
paboyle
|
5fe2b85cbd
|
MPI3 and shared memory support
|
2016-10-20 16:58:01 +01:00 |
|
paboyle
|
c7cccaaa69
|
Comm vector for shmem
|
2016-10-20 16:57:31 +01:00 |
|
paboyle
|
cbcfea466f
|
MPI3
|
2016-10-20 16:57:14 +01:00 |
|
paboyle
|
4955672fc3
|
MPI3
|
2016-10-20 16:57:00 +01:00 |
|
paboyle
|
8c043da5b7
|
SHMEM and comms allocator made different
|
2016-10-20 16:56:05 +01:00 |
|
paboyle
|
3cbe974eb4
|
Layout
|
2016-10-20 16:55:21 +01:00 |
|
|
|
997fd882ff
|
Merge branch 'develop' into feature/feynman-rules
# Conflicts:
# lib/Threads.h
# lib/qcd/action/fermion/WilsonFermion.cc
# lib/qcd/action/fermion/WilsonFermion.h
# lib/qcd/utils/SUn.h
# lib/simd/Grid_avx.h
# lib/simd/Intel512common.h
|
2016-10-19 18:35:18 +01:00 |
|
Guido Cossu
|
590675e2ca
|
Csum in hex format
|
2016-10-19 17:26:25 +01:00 |
|
Guido Cossu
|
8c65bdf6d3
|
Printing checksum for the RNG file
|
2016-10-19 16:56:11 +01:00 |
|
Guido Cossu
|
74f1ed3bc5
|
Adding some documentation for HMC
|
2016-10-19 10:51:13 +01:00 |
|
paboyle
|
7af9b87318
|
Cache face tables to improve performance.
Extract merge now looking poor.
|
2016-10-18 09:51:37 +01:00 |
|
paboyle
|
811ca45473
|
GNU clang hack for AVX512 since there are missing reduce intrinsics in Clang 3.9 and GCC-6 AVX512 support
|
2016-10-17 16:23:21 +01:00 |
|
paboyle
|
bc1a4d40ba
|
Faster integer handling avoid push_back
|
2016-10-17 16:16:44 +01:00 |
|
Guido Cossu
|
e250e6b7bb
|
Moving parameters outside of the HMCrunner
|
2016-10-14 17:22:32 +01:00 |
|
paboyle
|
c8079e6621
|
Time the face gateher in x-dir more carefully
|
2016-10-13 22:28:50 +01:00 |
|
azusayamaguchi
|
8b0d171c9a
|
32bit issue on the KNL code variant where byte offsets were stored
|
2016-10-12 17:49:32 +01:00 |
|
azusayamaguchi
|
8bbd9ebc27
|
Reversing changes to Stencil class
|
2016-10-12 13:47:20 +01:00 |
|
azusayamaguchi
|
6472b431f0
|
__rdpmc needed for gcc, clang++
|
2016-10-12 12:29:08 +01:00 |
|
azusayamaguchi
|
bd205a3293
|
Fixing for non x86 and non KNL
|
2016-10-12 12:09:15 +01:00 |
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azusayamaguchi
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496beffa88
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Fix non-KNL build
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2016-10-12 12:06:08 +01:00 |
|
azusayamaguchi
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9b63e97108
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align not absolutely required and confuses clang++
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2016-10-12 11:51:21 +01:00 |
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azusayamaguchi
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81f2aeaece
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KNL streaming stores, and KNL performance coutners
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2016-10-12 11:45:22 +01:00 |
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paboyle
|
2d4a45c758
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Typecast pointer
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2016-10-12 09:14:15 +01:00 |
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paboyle
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a123dcd7e9
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Static required for shmem. Reading same object twice requires csum reset
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2016-10-12 00:29:57 +01:00 |
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