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2,767 Commits 86 Branches 14 Tags 74 MiB
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1816 Commits

Author SHA1 Message Date
paboyle
4b17e8eba8 Merge branch 'develop' into feature/bgq-asm 
Conflicts:
	lib/qcd/action/fermion/Fermion.h
	lib/qcd/action/fermion/WilsonFermion.cc
	lib/util/Init.cc
	tests/Test_cayley_even_odd_vec.cc
 2017-03-28 04:49:30 -04:00
paboyle
75112a632a IO improvements to fail on IO error 2017-03-28 02:28:04 -04:00
paboyle
18bde08d1b Merge branch 'feature/staggering' into develop 2017-03-28 15:25:55 +09:00
Guido Cossu
4c1ea8677e Small cosmetic changes and vscode gitignore 2017-03-23 14:09:35 +09:00
paboyle
fc93f0b2ec Save some code for static huge tlb's. It is ifdef'ed out but an interesting root only experiment. 
No gain from it.
 2017-03-21 22:30:29 -04:00
paboyle
8c8473998d Average over whole cluster the comm time. 2017-03-21 22:29:51 -04:00
Guido Cossu
120fb59978 Adding tests for WilsonFlow classes 2017-03-21 16:11:35 +09:00
Guido Cossu
fd56b3ff38 Merge branch 'develop' into feature/hmc_generalise 2017-03-21 13:33:41 +09:00
Guido Cossu
0ec6829edc Fixing compilation errors for the WilsonFlow 2017-03-21 13:06:32 +09:00
Guido Cossu
18b7845b7b Adding WilsonFlow smearing 2017-03-21 11:52:05 +09:00
Guido Cossu
3d0fe15374 Added topological charge measurement 2017-03-17 16:14:57 +09:00
Guido Cossu
91886068fe Fixed seg fault for observable modules 2017-03-17 13:59:31 +09:00
Guido Cossu
6d1e9e5f92 Small cleanup of the observables 2017-03-17 11:42:55 +09:00
Guido Cossu
b640230b1e Moving hmc observables in a different directory 2017-03-17 11:40:17 +09:00
paboyle
e7c36771ed ZMobius prep for asm 2017-03-15 14:23:33 -04:00
paboyle
8dc57a1e25 Layout change 2017-03-13 11:11:46 +00:00
paboyle
f57bd770b0 Merge branch 'bugfix/dminus' into feature/bgq-asm 2017-03-13 11:11:03 +00:00
paboyle
4ed10a3d06 Merge branch 'develop' into feature/bgq-asm 2017-03-13 11:10:10 +00:00
Chulwoo Jung
33edde245d Changing Dminus(Dag) to use full vectors to work correctly 2017-03-12 23:02:42 -04:00
paboyle
447c5e6cd7 Z mobius hermiticity correction 2017-03-13 01:30:43 +00:00
paboyle
8b99d80d8c Merge branch 'bgq-asm-shmemfixes' into feature/bgq-asm 2017-03-12 23:30:09 +00:00
Guido Cossu
b3dede4dd3 Merge branch 'develop' into feature/hmc_generalise 2017-03-10 23:57:37 +09:00
Guido Cossu
4e34132f4d Correcting modules use in test files 2017-03-10 23:54:53 +09:00
Guido Cossu
c07cb10247 Merge branch 'feature/hmc_generalise' of https://github.com/paboyle/Grid into feature/hmc_generalise 2017-03-10 22:37:25 +09:00
Guido Cossu
d7767a2a62 Few more tests 2017-03-10 22:33:48 +09:00
Guido Cossu
ec035983fd Fixing the implicit integration 2017-03-01 11:56:35 +00:00
paboyle
af230a1fb8 Average the time across the whole machine for outliers 2017-02-28 17:05:22 -05:00
Christopher Kelly
06a132e3f9 Fixes to SHMEM comms 2017-02-28 13:31:54 -08:00
Guido Cossu
596dcd85b2 Auxiliary fields 2017-02-27 13:16:38 +00:00
paboyle
96d44d5c55 Header fix 2017-02-24 19:12:11 -05:00
Guido Cossu
7270c6a150 Integrator works now 2017-02-24 17:03:42 +00:00
Lanny91
7fe797daf8 SIMD vector length sanity checks 2017-02-23 16:49:44 +00:00
Lanny91
486a01294a Corrected QPX SIMD width 2017-02-23 16:47:56 +00:00
paboyle
586a7c90b7 Merge branch 'develop' into feature/bgq-asm 2017-02-23 00:26:59 +00:00
paboyle
e099dcdae7 Merge branch 'develop' into feature/bgq-asm 2017-02-23 00:25:29 +00:00
paboyle
4e7ab3166f Refactoring header layout 2017-02-22 18:09:33 +00:00
paboyle
aac80cbb44 Bug fix from Chris K 2017-02-22 12:19:09 -05:00
Lanny91
c80948411b Added tRotate function and MaddRealPart struct for generic SIMD, bugfix in MultRealPart and minor cosmetic changes. 2017-02-22 14:57:10 +00:00
Lanny91
95625a7bd1 Use Grid Integer type 2017-02-22 13:09:32 +00:00
Lanny91
0796696733 Emulated integer vector type for QPX and generic SIMD instruction sets. 2017-02-22 12:01:36 +00:00
azusayamaguchi
1c30e9a961 Verified 2017-02-21 23:01:25 +00:00
Francesco Sanfilippo
93cc270016 making public same serializable parameters in HMC Module 
RNGModuleParameters
GridModuleParameters
 2017-02-21 23:11:56 +01:00
Francesco Sanfilippo
15e668eef1 now it is possible to pass {coords list} to a peek or poke 2017-02-21 22:48:38 +01:00
azusayamaguchi
bf7e3f20d4 Staggaered fermion optimised version 2017-02-21 14:35:42 +00:00
Guido Cossu
902afcfbaf Adding metric and the implicit steps 2017-02-21 11:30:57 +00:00
paboyle
3ae92fa2e6 Global changes to parallel_for structure. 
Move the comms flags to more sensible names
 2017-02-21 05:24:27 -05:00
paboyle
3906cd2149 Stencil fix on BNL KNL system 2017-02-20 17:51:31 -05:00
paboyle
661fc4d3d1 Debug AVX512 exchange code paths 2017-02-20 17:48:36 -05:00
paboyle
41009cc142 Move excange into the stencil only; keep Cshift fully general 2017-02-20 17:48:04 -05:00
paboyle
37720c4db7 Count bytes off node only 2017-02-20 17:47:40 -05:00
Guido Cossu
97a6b61551 Covariant laplacian and implicit integration 2017-02-20 11:17:27 +00:00
paboyle
cd0da81196 Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm 2017-02-16 18:52:30 -05:00
paboyle
f246fe3304 Improvements to avx for invertible to avoid latent bug 2017-02-16 23:52:44 +00:00
paboyle
8a29c16bde Faster gather exchange 2017-02-16 23:52:22 +00:00
paboyle
d68907fc3e Debug temp 2017-02-16 18:51:35 -05:00
paboyle
5c0adf7bf2 Make clang happy with parenthesis 2017-02-16 23:51:33 +00:00
paboyle
be3a8249c6 Faster gather 2017-02-16 23:51:15 +00:00
paboyle
bd600702cf Vectorise the XYZT face gathering better. 
Hard coded for simd_layout <= 2 in any given spread out direction; full generality is inconsistent
with efficiency.
 2017-02-15 11:11:04 +00:00
Guido Cossu
bafb101e4f Testing different versions of the Laplacian 2017-02-13 15:38:11 +00:00
Guido Cossu
08fdf05528 Added and tested the covariant laplacian + CG solver 2017-02-13 15:05:01 +00:00
paboyle
aca7a3ef0a Optimisation control improvements 2017-02-10 18:22:31 -05:00
Guido Cossu
c3d7ec65fa All tests compile. 2017-02-10 10:27:51 +00:00
Guido Cossu
e0571c872b Merge branch 'develop' into feature/hmc_generalise 2017-02-09 16:12:00 +00:00
Guido Cossu
84687ccf1f Handling an Intel compiler warning for Json class 2017-02-09 15:33:33 +00:00
Guido Cossu
3274561cf8 Cleanup 2017-02-09 15:18:38 +00:00
paboyle
2c246551d0 Overlap comms and compute options in wilson kernels 2017-02-07 01:37:10 -05:00
paboyle
71ac2e7940 Faster RNG init 2017-02-07 01:33:23 -05:00
paboyle
a48ee6f0f2 Don't use MPI3_leader any more. No real gain and complex 2017-02-07 01:31:24 -05:00
paboyle
73547cca66 MPI3 working i think 2017-02-07 01:30:02 -05:00
paboyle
123c673db7 Policy to control async or sync SendRecv 2017-02-07 01:24:54 -05:00
paboyle
61f82216e2 Communicator Policy, NodeCount distinct from Rank count 2017-02-07 01:22:53 -05:00
paboyle
8e7ca92278 Debugged cshift case 2017-02-07 01:21:32 -05:00
paboyle
485ad6fde0 Stencil working in SHM MPI3 2017-02-07 01:20:39 -05:00
paboyle
6ea2184e18 OMP define change 2017-02-07 01:17:16 -05:00
paboyle
fdc170b8a3 Parallel fors in lattice transfer 2017-02-07 01:16:39 -05:00
paboyle
85c7bc4321 Bug fixes for cases that physics code couldn't hit but latent 
and discovered on KNL (long vector, y SIMD dir) and checker dir set to y.
Remove the assertions on these code paths now they are tested.
 2017-02-07 01:01:15 -05:00
paboyle
0883d6a7ce Overlap comms compute support; make reg naming consistent with bgq aasm 2017-02-07 00:59:32 -05:00
paboyle
b5e9c900a4 Better printing and signal handling options 2017-02-07 00:57:55 -05:00
paboyle
4bbdfb434c Overlap comms compute modifications 2017-02-07 00:57:01 -05:00
Lanny91
b7cd1a19e3 Utilities for reading and writing "pair" objects. 2017-02-06 14:08:59 +00:00
Christopher Kelly
c94133af49 Added iteration reporting to CG and mixed CG 
Added ability to manually change the initial CG inner tolerance in mixed CG
Added .hpp files to filelist script
 2017-02-02 17:04:42 -05:00
Antonin Portelli
e7d8030a64 operator>> for serialisable enums 2017-02-01 15:51:08 -08:00
Antonin Portelli
d775fbb2f9 Gammas: code cleaning and gamma_L implementation & test 2017-02-01 15:45:05 -08:00
Antonin Portelli
863855f46f header fix 2017-02-01 11:59:44 -08:00
Antonin Portelli
419af7610d New gamma matrices tidying: generated code is confined to Gamma.* for readability 2017-02-01 11:23:12 -08:00
Antonin Portelli
1140573027 Gamma adj fix: now in Grid namespace to avoid collisions 2017-01-30 10:53:04 -08:00
Antonin Portelli
a0cfbb6e88 Merge branch 'feature/gammas' into feature/hadrons 
# Conflicts:
#	.gitignore
#	lib/qcd/spin/Dirac.cc
#	scripts/filelist
 2017-01-30 09:10:49 -08:00
Antonin Portelli
515a26b3c6 gammas: copyright update 2017-01-30 09:07:09 -08:00
Guido Cossu
16be6d378c Now action factory support different Fields (templated) 2017-01-30 14:22:41 +00:00
Guido Cossu
f05d0565aa Adding ScalarField theory 2017-01-30 10:59:28 +00:00
Guido Cossu
899e685627 Merge branch 'feature/sitmo_rng' into develop 2017-01-27 14:15:56 +00:00
Guido Cossu
6929a84c70 Reformatting files 2017-01-27 11:54:44 +00:00
Guido Cossu
5c779a789b Moving registrations in an independent file 2017-01-27 11:23:51 +00:00
Antonin Portelli
fad743fbb1 Build system sanity check: corrected several headers not in the <Grid/*> format 2017-01-26 17:00:41 -08:00
Guido Cossu
e863a948e3 Cleaning up files and directories 2017-01-26 15:24:49 +00:00
Guido Cossu
7996f06335 Commented out registrations. 
Move to an independent file that is linked only for the factory managed HMC
 2017-01-25 18:27:45 +00:00
Guido Cossu
ef8d3831eb Temporary patch the threading error in InsertSlice and ExtractSlice 
Find source and fix the error
 2017-01-25 18:12:04 +00:00
Guido Cossu
70ed9fc40c Updating the engine to the last version 2017-01-25 18:10:41 +00:00
Guido Cossu
7b40a3e3e5 Reorganizing files 2017-01-25 18:09:46 +00:00
Guido Cossu
677757cfeb Added and tested SITMO PRNG 2017-01-25 12:47:22 +00:00
Guido Cossu
f7fbbaaca3 Compiles after merging 2017-01-25 12:11:58 +00:00
Guido Cossu
17629b8d9e Merge branch 'develop' into feature/hmc_generalise 2017-01-25 11:33:53 +00:00
Guido Cossu
0baa20d292 Againg fixing compilation on Travis, no LIME lib present 2017-01-25 11:18:44 +00:00
Guido Cossu
4571c918a4 Fixing compilation error when compiling without LIME 2017-01-25 11:14:43 +00:00
Guido Cossu
5251ea4d30 Adding more fermion action modules, generalised DWF 2017-01-25 11:10:44 +00:00
Antonin Portelli
05cb6d318a gammas: adjoint implemented as a symbolic operation 2017-01-24 18:07:43 -08:00
Antonin Portelli
0432e30256 Gamma right multiply code fix (now passes consistency check) 2017-01-24 17:36:23 -08:00
Antonin Portelli
f7db342f49 Serialisable enums can be converted to int 2017-01-24 17:33:26 -08:00
Guido Cossu
7f456b4173 👷 Added all pseudofermion actions to the serialiser 2017-01-24 13:57:32 +00:00
Antonin Portelli
a37e71f362 New automatic implementation of gamma matrices, Meson and SeqGamma are broken 2017-01-23 19:13:43 -08:00
Guido Cossu
244f8fb6dc Added JSON parser (without NextElement) 2017-01-23 14:57:38 +00:00
Antonin Portelli
4c75095c61 HDF5: header fix 2017-01-20 12:14:01 -08:00
Antonin Portelli
afa095d33d HDF5: better complex number support 2017-01-20 12:10:41 -08:00
Antonin Portelli
6b5259cc10 HDF5 detects if a name is a dataset or not without using exception catching 2017-01-20 11:03:19 -08:00
Guido Cossu
27dfe816fa Added TwoFlavorsEO 
Had to remove a conformability check in the Derivative of SchurDiff,
see the comments in the file
 2017-01-20 16:59:31 +00:00
Guido Cossu
f96fac0aee All functionalities ready. 
Todo: add all the fermion action modules
 2017-01-20 12:56:20 +00:00
Antonin Portelli
7423a352c5 HDF5: typos 2017-01-19 18:33:04 -08:00
Antonin Portelli
81e66d6631 HDF5: revert back to native types 2017-01-19 18:24:53 -08:00
Antonin Portelli
ade1058e5f Hdf5Type does not need to be a pointer anymore 2017-01-19 18:23:55 -08:00
Antonin Portelli
6eea9e4da7 HDF5 types static initialisation is mysteriously buggy on BG/Q, changing strategy 2017-01-19 18:02:53 -08:00
Antonin Portelli
2c673666da Standardisation of HDF5 types 2017-01-19 17:19:12 -08:00
Guido Cossu
851f2ad8ef Adding fermions actions support in the factories 2017-01-19 10:00:02 +00:00
Antonin Portelli
5405526424 Code typo 2017-01-18 22:42:19 -08:00
Antonin Portelli
654e0b0fd0 Serialisable object are now comparable with == 2017-01-18 17:40:32 -08:00
Antonin Portelli
4be08ebccc debug code cleaning 2017-01-18 17:39:59 -08:00
Antonin Portelli
f599cb5b17 HDF5 serial IO implemented and tested 2017-01-18 16:50:21 -08:00
Guido Cossu
23e0561dd6 Added all required functionalities, time for cleaning 
All actions to be added
 2017-01-18 16:31:51 +00:00
Antonin Portelli
5803933aea First implementation of HDF5 serial IO writer, reader is still empty 2017-01-17 16:21:18 -08:00
Guido Cossu
924130833e Moved more parameters to serialization 2017-01-17 13:22:18 +00:00
Guido Cossu
0157274762 HMC factories 2017-01-17 10:46:49 +00:00
Guido Cossu
87e8aad5a0 Added support for input file HMC modules (missing the actions yet) 2017-01-16 16:07:12 +00:00
Guido Cossu
c6f59c2933 Adding factories 2017-01-16 10:18:09 +00:00
Antonin Portelli
91a3534054 Lattice slice utilities now thread safe 2017-01-16 06:32:25 +00:00
Guido Cossu
0dfda4bb90 Working on the RNGModule 2017-01-09 11:06:18 +00:00
Guido Cossu
1189ebc8b5 Cleaning up the checkpointers interface 2017-01-05 15:52:52 +00:00
Guido Cossu
1bb8578173 Added module for checkpointers 2017-01-05 13:09:32 +00:00
Peter Boyle
c3b6d573b9 Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm 2016-12-30 22:42:17 +00:00
Peter Boyle
1e179c903d Worried about integer; suspect where statements are broken 2016-12-27 17:46:38 +00:00
Peter Boyle
669cfca9b7 No inline 2016-12-27 17:45:40 +00:00
Peter Boyle
ff2f559a57 Remove inline on gather optimised path 2016-12-27 17:45:19 +00:00
Peter Boyle
03c81bd902 Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm 2016-12-27 11:25:35 +00:00
Peter Boyle
a869addef1 Stats switch off 2016-12-27 11:25:22 +00:00
Peter Boyle
1caa3fbc2d LOCK UNLOCK only 2016-12-27 11:24:45 +00:00
Peter Boyle
3d21297bbb Call the fast path compressor for wilson kernels to avoid if else on projector 2016-12-27 11:23:13 +00:00
Peter Boyle
25efefc5b4 Back to original thread policy post test 2016-12-23 09:49:04 +00:00
Peter Boyle
eabf316ed9 BGQ performance ASM 2016-12-22 21:56:08 +00:00
Peter Boyle
04ae7929a3 BGQ or KNL assembler now 2016-12-22 17:53:22 +00:00
Peter Boyle
caba0d42a5 L1p controls 2016-12-22 17:52:55 +00:00
Peter Boyle
9ae81c06d2 L1p controls for BG/Q 2016-12-22 17:52:21 +00:00
Peter Boyle
7dc36628a1 QPX finishing 2016-12-22 17:50:48 +00:00