paboyle
447c5e6cd7
Z mobius hermiticity correction
2017-03-13 01:30:43 +00:00
paboyle
8b99d80d8c
Merge branch 'bgq-asm-shmemfixes' into feature/bgq-asm
2017-03-12 23:30:09 +00:00
Guido Cossu
4e34132f4d
Correcting modules use in test files
2017-03-10 23:54:53 +09:00
Guido Cossu
c07cb10247
Merge branch 'feature/hmc_generalise' of https://github.com/paboyle/Grid into feature/hmc_generalise
2017-03-10 22:37:25 +09:00
Guido Cossu
d7767a2a62
Few more tests
2017-03-10 22:33:48 +09:00
Guido Cossu
ec035983fd
Fixing the implicit integration
2017-03-01 11:56:35 +00:00
paboyle
af230a1fb8
Average the time across the whole machine for outliers
2017-02-28 17:05:22 -05:00
Christopher Kelly
06a132e3f9
Fixes to SHMEM comms
2017-02-28 13:31:54 -08:00
Guido Cossu
596dcd85b2
Auxiliary fields
2017-02-27 13:16:38 +00:00
Guido Cossu
7270c6a150
Integrator works now
2017-02-24 17:03:42 +00:00
paboyle
e099dcdae7
Merge branch 'develop' into feature/bgq-asm
2017-02-23 00:25:29 +00:00
paboyle
4e7ab3166f
Refactoring header layout
2017-02-22 18:09:33 +00:00
azusayamaguchi
1c30e9a961
Verified
2017-02-21 23:01:25 +00:00
Francesco Sanfilippo
93cc270016
making public same serializable parameters in HMC Module
...
RNGModuleParameters
GridModuleParameters
2017-02-21 23:11:56 +01:00
azusayamaguchi
bf7e3f20d4
Staggaered fermion optimised version
2017-02-21 14:35:42 +00:00
Guido Cossu
902afcfbaf
Adding metric and the implicit steps
2017-02-21 11:30:57 +00:00
paboyle
3ae92fa2e6
Global changes to parallel_for structure.
...
Move the comms flags to more sensible names
2017-02-21 05:24:27 -05:00
Guido Cossu
97a6b61551
Covariant laplacian and implicit integration
2017-02-20 11:17:27 +00:00
Guido Cossu
bafb101e4f
Testing different versions of the Laplacian
2017-02-13 15:38:11 +00:00
Guido Cossu
08fdf05528
Added and tested the covariant laplacian + CG solver
2017-02-13 15:05:01 +00:00
Guido Cossu
c3d7ec65fa
All tests compile.
2017-02-10 10:27:51 +00:00
Guido Cossu
e0571c872b
Merge branch 'develop' into feature/hmc_generalise
2017-02-09 16:12:00 +00:00
Guido Cossu
3274561cf8
Cleanup
2017-02-09 15:18:38 +00:00
paboyle
2c246551d0
Overlap comms and compute options in wilson kernels
2017-02-07 01:37:10 -05:00
eedcaf6470
Merge branch 'feature/hadrons' into feature/qed-fvol
2017-02-01 15:53:10 -08:00
d775fbb2f9
Gammas: code cleaning and gamma_L implementation & test
2017-02-01 15:45:05 -08:00
863855f46f
header fix
2017-02-01 11:59:44 -08:00
419af7610d
New gamma matrices tidying: generated code is confined to Gamma.* for readability
2017-02-01 11:23:12 -08:00
1140573027
Gamma adj fix: now in Grid namespace to avoid collisions
2017-01-30 10:53:04 -08:00
a0cfbb6e88
Merge branch 'feature/gammas' into feature/hadrons
...
# Conflicts:
# .gitignore
# lib/qcd/spin/Dirac.cc
# scripts/filelist
2017-01-30 09:10:49 -08:00
515a26b3c6
gammas: copyright update
2017-01-30 09:07:09 -08:00
Guido Cossu
16be6d378c
Now action factory support different Fields (templated)
2017-01-30 14:22:41 +00:00
Guido Cossu
f05d0565aa
Adding ScalarField theory
2017-01-30 10:59:28 +00:00
28d99b5297
Merge branch 'develop' into feature/qed-fvol
2017-01-27 16:59:53 -08:00
Guido Cossu
6929a84c70
Reformatting files
2017-01-27 11:54:44 +00:00
Guido Cossu
5c779a789b
Moving registrations in an independent file
2017-01-27 11:23:51 +00:00
fad743fbb1
Build system sanity check: corrected several headers not in the <Grid/*> format
2017-01-26 17:00:41 -08:00
Guido Cossu
e863a948e3
Cleaning up files and directories
2017-01-26 15:24:49 +00:00
Guido Cossu
7996f06335
Commented out registrations.
...
Move to an independent file that is linked only for the factory managed HMC
2017-01-25 18:27:45 +00:00
Guido Cossu
7b40a3e3e5
Reorganizing files
2017-01-25 18:09:46 +00:00
Guido Cossu
17629b8d9e
Merge branch 'develop' into feature/hmc_generalise
2017-01-25 11:33:53 +00:00
Guido Cossu
0baa20d292
Againg fixing compilation on Travis, no LIME lib present
2017-01-25 11:18:44 +00:00
Guido Cossu
4571c918a4
Fixing compilation error when compiling without LIME
2017-01-25 11:14:43 +00:00
Guido Cossu
5251ea4d30
Adding more fermion action modules, generalised DWF
2017-01-25 11:10:44 +00:00
05cb6d318a
gammas: adjoint implemented as a symbolic operation
2017-01-24 18:07:43 -08:00
0432e30256
Gamma right multiply code fix (now passes consistency check)
2017-01-24 17:36:23 -08:00
Guido Cossu
7f456b4173
👷 Added all pseudofermion actions to the serialiser
2017-01-24 13:57:32 +00:00
a37e71f362
New automatic implementation of gamma matrices, Meson and SeqGamma are broken
2017-01-23 19:13:43 -08:00
Guido Cossu
244f8fb6dc
Added JSON parser (without NextElement)
2017-01-23 14:57:38 +00:00
Guido Cossu
27dfe816fa
Added TwoFlavorsEO
...
Had to remove a conformability check in the Derivative of SchurDiff,
see the comments in the file
2017-01-20 16:59:31 +00:00
Guido Cossu
f96fac0aee
All functionalities ready.
...
Todo: add all the fermion action modules
2017-01-20 12:56:20 +00:00
Guido Cossu
851f2ad8ef
Adding fermions actions support in the factories
2017-01-19 10:00:02 +00:00
Guido Cossu
23e0561dd6
Added all required functionalities, time for cleaning
...
All actions to be added
2017-01-18 16:31:51 +00:00
Guido Cossu
924130833e
Moved more parameters to serialization
2017-01-17 13:22:18 +00:00
Guido Cossu
0157274762
HMC factories
2017-01-17 10:46:49 +00:00
Guido Cossu
87e8aad5a0
Added support for input file HMC modules (missing the actions yet)
2017-01-16 16:07:12 +00:00
Guido Cossu
c6f59c2933
Adding factories
2017-01-16 10:18:09 +00:00
Guido Cossu
0dfda4bb90
Working on the RNGModule
2017-01-09 11:06:18 +00:00
Guido Cossu
1189ebc8b5
Cleaning up the checkpointers interface
2017-01-05 15:52:52 +00:00
82b3f54697
scalar free propagator fix
2017-01-05 14:58:07 +00:00
Guido Cossu
1bb8578173
Added module for checkpointers
2017-01-05 13:09:32 +00:00
afbf7d4c37
QED Gimpl moved in Photon.h
2016-12-29 22:43:38 +01:00
8c3cc32364
Scalar action
2016-12-29 22:42:58 +01:00
Peter Boyle
03c81bd902
Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm
2016-12-27 11:25:35 +00:00
Peter Boyle
a869addef1
Stats switch off
2016-12-27 11:25:22 +00:00
Peter Boyle
3d21297bbb
Call the fast path compressor for wilson kernels to avoid if else on projector
2016-12-27 11:23:13 +00:00
Peter Boyle
25efefc5b4
Back to original thread policy post test
2016-12-23 09:49:04 +00:00
Peter Boyle
eabf316ed9
BGQ performance ASM
2016-12-22 21:56:08 +00:00
Peter Boyle
04ae7929a3
BGQ or KNL assembler now
2016-12-22 17:53:22 +00:00
Peter Boyle
caba0d42a5
L1p controls
2016-12-22 17:52:55 +00:00
Peter Boyle
9ae81c06d2
L1p controls for BG/Q
2016-12-22 17:52:21 +00:00
Peter Boyle
b8cdb3e90a
Debug hack; raises from 62GF/s to 72 GF/s per node on BG/Q
2016-12-22 17:50:14 +00:00
Guido Cossu
5214846341
Adding a resource manager
2016-12-22 12:41:56 +00:00
17b3a10d46
stochastic QED: function to cache 1/sqrt(khat^2)
2016-12-22 00:29:19 +01:00
Guido Cossu
ce1a115e0b
Removing redundant arguments for integrator functions, step 1
2016-12-20 17:51:30 +00:00
9ac3ac41df
serialisable Photon parameters
2016-12-20 12:41:01 +01:00
6f1ea96293
Merge branch 'develop' into feature/qed-fvol
2016-12-20 12:33:02 +01:00
paboyle
3e6945cd65
Fixing AVX Z-mobius
2016-12-18 02:05:11 +00:00
paboyle
87be03006a
AVX 512 code broke other compiles; fixing
2016-12-18 01:45:09 +00:00
Peter Boyle
4d8b01b7ed
Merge branch 'develop' of https://github.com/paboyle/Grid into develop
2016-12-18 00:56:57 +00:00
Peter Boyle
fa6acccf55
Zmobius asm
2016-12-18 00:56:19 +00:00
azusayamaguchi
df9108154d
Debugged 2 versions of assembler; ls vectorised, xyzt vectorised
2016-12-17 23:47:51 +00:00
azusayamaguchi
b3e7f600da
Partial implementation of 4d vectorisation assembler
2016-12-16 23:50:30 +00:00
azusayamaguchi
d4071daf2a
Template specialise
2016-12-16 22:28:29 +00:00
azusayamaguchi
a2a6329094
AVX512 only for ASM compilation
2016-12-16 22:03:29 +00:00
azusayamaguchi
eabc577940
Assembler possibly working
2016-12-16 16:55:36 +00:00
2e3c5890b6
qed-fvol: build fix
2016-12-15 20:06:46 +00:00
bc6678732f
Merge branch 'feature/hadrons' into feature/qed-fvol
...
# Conflicts:
# Makefile.am
# configure.ac
# lib/qcd/action/gauge/Photon.h
2016-12-15 19:53:00 +00:00
91e98b1dd5
Merge branch 'feature/hadrons' into develop
2016-12-15 18:15:56 +00:00
Guido Cossu
2fb92dbc6e
Cleaning up previous debug lines
2016-12-13 07:53:43 +00:00
Guido Cossu
5c74b6028b
Commit for debugging, lot of IO
2016-12-13 06:35:30 +00:00
Azusa Yamaguchi
426197e446
Nc=3
2016-12-12 09:10:54 +00:00
Azusa Yamaguchi
99e2c1e666
Kernels options
2016-12-12 09:08:53 +00:00
Azusa Yamaguchi
1440565a10
Decrease verbosity
2016-12-12 09:08:04 +00:00
Peter Boyle
fe187e9ed3
Compiles and passes under ZMobius with assembler
2016-12-10 00:47:48 +00:00
Peter Boyle
0091b50f49
Zmobius working -- not asm yet
2016-12-09 22:51:32 +00:00
Peter Boyle
fb8d4b2357
Lots of debug on performance Mobius
2016-12-08 17:28:28 +00:00
Guido Cossu
2bd4233919
Completed testing of the HMC for Ls vectorised version (on AVX2)
2016-12-07 04:56:37 +00:00
Guido Cossu
143c70e29f
Debugged the threaded version. Cleaning up
2016-12-07 04:40:25 +00:00
Guido Cossu
b812d5e39c
Added single threaded version of the derivative for the Ls vectorised DWF
2016-12-06 16:31:13 +00:00
Guido Cossu
01480da0a8
Merge branch 'develop' into feature/hmc_generalise
2016-12-05 05:10:27 +00:00
Peter Boyle
e27c6b217c
Updating
2016-12-01 12:42:53 +00:00
paboyle
6adf35da54
Faster Mobius
2016-12-01 11:39:04 +00:00
paboyle
bd0430b34f
Serialisation in malloc fixed
2016-11-29 22:27:55 +00:00
Azusa Yamaguchi
c097fd041a
Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering
2016-11-29 13:44:17 +00:00
Azusa Yamaguchi
77fb25fb29
Push 5d tests
2016-11-29 13:43:56 +00:00
Azusa Yamaguchi
389e0a77bd
Staggerd Fermion 5D
2016-11-29 13:13:56 +00:00
paboyle
4704f2d009
Actions updated
2016-11-29 00:14:36 +00:00
Guido Cossu
ae9688e343
Reporting also the total mflops
2016-11-28 11:37:02 +00:00
fabcd4179d
Hadrons: propagator type coming from the fermion implementation
2016-11-28 14:02:10 +09:00
Azusa Yamaguchi
668ca57702
Merge branch 'develop' of https://github.com/paboyle/Grid into feature/staggering
2016-11-22 13:49:11 +00:00
Guido Cossu
62749d05a6
Naming the scalar action
2016-11-17 12:26:20 +00:00
Guido Cossu
3834feb4b7
Adding action names
2016-11-16 16:46:49 +00:00
James Harrison
739c2308b5
Set imaginary part of stochastic QED field to zero using real() instead of conjugate().
2016-11-15 13:07:52 +00:00
James Harrison
92ec3404f8
Set imaginary part of stochastic QED field to zero after FFT into position space
2016-11-14 17:59:02 +00:00
Guido Cossu
a783282b8b
Merge branch 'develop' into feature/hmc_generalise
2016-11-10 18:13:07 +00:00
paboyle
604f0ea2f6
Merge branch 'develop' into release/v0.6.0
2016-11-09 04:13:01 -08:00
paboyle
33dc1f51b5
Final sign off commits from Cori-1
2016-11-09 04:11:03 -08:00
azusayamaguchi
f7b60004f3
Merge branch 'develop' into release/v0.6.0
2016-11-04 16:08:07 +00:00
azusayamaguchi
b7d55f7dfb
Fix a typo in reorg of the --dslash-asm
2016-11-04 11:35:08 +00:00
Azusa Yamaguchi
ee686a7d85
Compiles now
2016-11-03 16:58:23 +00:00
Azusa Yamaguchi
1c5b7a6be5
Staggered phases first cut, c1, c2, u0
2016-11-03 16:26:56 +00:00
ec232af851
Photon.h references removed
2016-11-03 14:34:16 +00:00
aee44dc694
Photon.h removed from develop branch
2016-11-03 13:54:15 +00:00
75bbf6a0af
Merge branch 'develop' into feature/feynman-rules
2016-11-03 13:52:11 +00:00
paboyle
c067051d5f
Merge branch 'develop' into release/v0.6.0
2016-11-02 13:59:18 +00:00
Guido Cossu
ae8561892e
Eliminating useless defines
2016-11-02 10:21:06 +00:00
paboyle
bb94ddd0eb
Tidy up of mpi3; also some cleaning of the dslash controls.
2016-11-02 08:07:09 +00:00
James Harrison
7f0fc0eff5
Remove explicit use of double-precision types in photon.h
2016-11-01 16:02:35 +00:00
Azusa Yamaguchi
164d3691db
Staggered
2016-11-01 14:24:22 +00:00
Guido Cossu
e8c3174ae2
Small change in the defines
2016-10-30 12:23:11 +00:00
Guido Cossu
9b066e94d0
Compilation with both single and double precision
2016-10-30 12:04:06 +00:00
James Harrison
618abdf302
Add missing volume factor in stochastic QED field
2016-10-29 11:04:02 +01:00
Guido Cossu
e1042aef77
First version of the doube prec for testing purposes
...
It does not compile single and double version at the same time
2016-10-28 17:20:04 +01:00
ca21003f01
Merge branch 'feature/fft-opt' into feature/feynman-rules
...
# Conflicts:
# lib/FFT.h
# lib/qcd/action/fermion/WilsonFermion5D.h
# tests/core/Test_fft.cc
2016-10-26 18:44:47 +01:00
Guido Cossu
d50055cd96
Making the ILDG support optional
2016-10-26 09:48:01 +01:00
Azusa Yamaguchi
bca861e112
Note:FFT shoud be GridFFT (Not change yet).
...
Gauge fix with FFt is added (tests/core)
2016-10-25 14:21:48 +01:00
Guido Cossu
47c7159177
ILDG reader/writer works
...
Fill the xml header with the required information, todo.
2016-10-24 21:57:54 +01:00
Guido Cossu
f55c16f984
Adding a barrier in the RNG save
2016-10-24 11:02:14 +01:00
azusayamaguchi
c190221fd3
Internal SHM comms in non-simd directions working
...
Need to fix simd directions
2016-10-22 18:14:27 +01:00
Guido Cossu
4b740fc8fd
Debugging the RNG state save
2016-10-22 13:06:00 +01:00
Guido Cossu
cccd14b09e
Small cleanup
2016-10-21 17:20:54 +01:00
Guido Cossu
e6acffdfc2
Fixing the plaquette computation
2016-10-21 16:06:34 +01:00
7c8f79b147
more stochastic QED fixes
2016-10-21 15:20:12 +01:00
462921e549
QED: fix stochastic field
2016-10-21 14:41:08 +01:00
Guido Cossu
392130a537
Working on the 5d
2016-10-21 14:22:25 +01:00
azusayamaguchi
6a9eae6b6b
Reporting improvements
2016-10-21 13:36:18 +01:00
bd6a228af6
Merge commit '20a091c3eddfdb67a82ece6413740a93650a2f98' into feature/feynman-rules
2016-10-21 13:10:30 +01:00
63d219498b
first (dirty) implementation of Feynman stoctachtic EM field
2016-10-21 13:10:13 +01:00
Guido Cossu
deef2673b2
Separating the Lattice theories stub from the QCD.h file
2016-10-20 17:24:08 +01:00
Guido Cossu
977b0a6dd9
Merge branch 'develop' into feature/hmc_generalise
2016-10-20 17:04:41 +01:00
Guido Cossu
977d844394
Few modifications on stdout messages
2016-10-20 17:01:59 +01:00
paboyle
b58adc6a4b
commVector
2016-10-20 17:00:15 +01:00
997fd882ff
Merge branch 'develop' into feature/feynman-rules
...
# Conflicts:
# lib/Threads.h
# lib/qcd/action/fermion/WilsonFermion.cc
# lib/qcd/action/fermion/WilsonFermion.h
# lib/qcd/utils/SUn.h
# lib/simd/Grid_avx.h
# lib/simd/Intel512common.h
2016-10-19 18:35:18 +01:00
Guido Cossu
8c65bdf6d3
Printing checksum for the RNG file
2016-10-19 16:56:11 +01:00
Guido Cossu
74f1ed3bc5
Adding some documentation for HMC
2016-10-19 10:51:13 +01:00
Guido Cossu
e250e6b7bb
Moving parameters outside of the HMCrunner
2016-10-14 17:22:32 +01:00
azusayamaguchi
81f2aeaece
KNL streaming stores, and KNL performance coutners
2016-10-12 11:45:22 +01:00
paboyle
6b27c42dfe
Cosmetic
2016-10-12 00:29:39 +01:00
Guido Cossu
eda4dd622e
Some more edit
2016-10-11 15:45:20 +01:00
paboyle
dc389e467c
axpy_ssp for any coeff type via template
2016-10-10 23:48:05 +01:00
paboyle
3619167d62
Mass parameter
2016-10-10 23:47:33 +01:00
paboyle
96f1d1b828
Debugged Domain wall and Overlap feynman rules (infinite Ls, finite mass).
2016-10-10 23:46:45 +01:00
paboyle
657e0a8f4d
Mass parameter
2016-10-10 23:46:10 +01:00
paboyle
616e7cd83e
Mass parameter
2016-10-10 23:45:48 +01:00
paboyle
6f26d2e8d4
Overlap tree level feynman rule
2016-10-10 23:45:18 +01:00
paboyle
c014574504
A "please implement me" feynman rule. If this were abstract virtual it would
...
require/force implementation
2016-10-10 23:44:00 +01:00
paboyle
d7ce164e6e
Feynman rule for DWF
2016-10-10 23:43:36 +01:00
paboyle
c0d5b99016
Dminus
2016-10-10 23:43:19 +01:00
paboyle
09ca32d678
Dminus added for Cayley
2016-10-10 23:42:55 +01:00
Guido Cossu
b56c9ffa52
Fix for AVXFMA
2016-10-10 14:43:37 +01:00
Guido Cossu
c68a2b9637
Minor fix
2016-10-10 11:54:58 +01:00
Guido Cossu
293df6cd20
Generalising the HMCRunner and moving parameters to the user level
2016-10-10 11:49:55 +01:00
Guido Cossu
65f61bb3bf
Reset QCD colours to 3
2016-10-10 09:46:17 +01:00
Guido Cossu
26b9740d53
Some fix for the GenericHMCrunner
2016-10-10 09:43:05 +01:00
Guido Cossu
6eb873dd96
Added scalar action phi^4
...
Check Norm2 output (Complex type assumption)
2016-10-07 17:28:46 +01:00
Guido Cossu
11b4c80b27
Added support for hmc and binary IO for a general field
2016-10-07 13:37:29 +01:00
Guido Cossu
2e453dfbf5
Added some instrumentation to benchmark the force computation
2016-10-06 17:52:45 +01:00
Guido Cossu
c065e454c3
Adding Binrary IO, untested
2016-10-06 10:12:11 +01:00
paboyle
4089984431
Timing hooks
2016-10-06 09:25:12 +01:00
Guido Cossu
c78bbd0f8c
Fix ASM compilation
2016-10-04 15:37:32 +01:00
Guido Cossu
d9b5fbd374
In the middle of adding a general binary writer
2016-10-04 11:24:08 +01:00
Guido Cossu
cfbc1a26b8
Now the gauge implementation has to take care of the Nexp
2016-10-03 16:20:06 +01:00
Guido Cossu
257f69f931
One more function to generalise the HMC integrator
2016-10-03 15:50:04 +01:00
Guido Cossu
e415260961
First cut on generalised HMC
...
Backward compatibility OK
2016-10-03 15:28:00 +01:00
paboyle
7089b6d5a5
Setting up but not implemented some QED rules
2016-09-26 09:43:40 +01:00
paboyle
b6713ecb60
Momentum space rules for Overlap, DWF untested to date
2016-09-26 09:39:09 +01:00
Guido Cossu
c4ac6e7e8f
Consolidating HMC interface
...
Uniformed interface for standard action in fundamental rep and Hirep
2016-09-23 10:47:42 +01:00
Guido Cossu
510e340e16
Debugged last commit for the Two index representation
2016-09-22 22:16:21 +01:00
Guido Cossu
6ffadca153
Restored number of colours to 3
2016-09-22 14:22:54 +01:00
Guido Cossu
b6597b74e7
Added support for the Two index Symmetric and Antisymmetric representations
...
Tested for HMC convergence: OK
Added also a test file showing an example for mixed representations
2016-09-22 14:17:37 +01:00
Guido Cossu
fda408ee6f
Added first lines for supporting Two Index representations
2016-09-13 10:43:30 +01:00
Guido Cossu
b9c80318a2
Merge branch 'develop' into feature/hirep
2016-09-13 10:01:51 +01:00
Guido Cossu
5df5d52d41
Fix for the Intel compiler
2016-09-12 17:17:20 +01:00
Guido Cossu
f76f281e58
Cleaning files after fix
2016-09-09 11:34:25 +01:00
Guido Cossu
aa20cc8b52
Fixing compilation error with AVX512 flag
2016-09-09 02:58:52 -07:00
Guido Cossu
0fd179fb33
Merge branch 'develop' into feature/hirep
2016-09-01 12:59:53 +01:00
Guido Cossu
f45ef8d114
Minor modification in ActionBase.h
2016-09-01 11:46:46 +01:00
paboyle
8535d433a7
Cold or hot must support any precisoin
2016-08-31 00:27:53 +01:00
paboyle
b573d1f35a
Wilson tree level added
2016-08-31 00:27:04 +01:00
paboyle
0c1d7e4daf
Mom space prop for Wilson action
2016-08-31 00:26:36 +01:00
paboyle
02e983a0cd
Momentum space prop and free prop convolution
2016-08-31 00:26:02 +01:00
Guido Cossu
fd5614738d
Merge branch 'develop' into feature/hirep
2016-08-30 18:21:36 +01:00
Guido Cossu
b0d3e4bb2c
Separating travis builds
2016-08-30 13:44:07 +01:00
Guido Cossu
b512ccbee6
HMC for Adjoint fermions works
...
Accepts and reproduces known results
Check initial instability of inverters
when starting from hot configurations
2016-08-30 11:31:25 +01:00
paboyle
4ab7dbfd57
Instantiate
2016-08-15 23:00:40 +01:00
paboyle
90e70790f3
Feature for z-Mobius prep
2016-08-15 22:31:29 +01:00
Guido Cossu
9c2e8d5e28
Nc=3 just to let all the test pass in Travis
2016-08-09 15:46:57 +01:00
Guido Cossu
147e2025b9
Added unit tests on the representation transformations
...
Status: Passing all tests
2016-08-08 16:54:22 +01:00
Guido Cossu
49b5c49851
Checked the hermiticity of the op in derivative, ok
...
Still CG fails to converge
2016-07-31 12:37:33 +01:00
Guido Cossu
089f0ab582
Debugged HMC for Creutz relation
2016-07-28 16:44:41 +01:00
Guido Cossu
b93e18ed50
Modified the Dirac Kernel class to compile with different number of colours
...
Added the general push_back functionality to accomodate for all defined representations
Compiles, not tested
2016-07-18 16:36:28 +01:00
Guido Cossu
9c77bb69a5
Added all elements for Hirep HMC
...
TODO: Test and debug
2016-07-18 12:05:23 +01:00
paboyle
fad5c675eb
sign error on the 4d gparity force
2016-07-16 01:51:56 +01:00
paboyle
4908b77d46
Fixed conflicts. PLEASE avoid making wholesale cosmetic only changes, this created
...
a HUGE amount of difficult to resolve and understand conflicts .
Wholesale formatting, reordering functions etc... in a central file like Tensor_class
or Grid_vector_types while others are also editing without making substantial functionality
changes creates pain.
2016-07-15 20:59:07 +01:00
paboyle
f4dd5062d7
Merge branch 'develop' of https://github.com/paboyle/Grid into develop
2016-07-15 19:26:06 +01:00
paboyle
980ff18956
Solving the instantiation no compile issue
2016-07-15 17:19:44 +01:00
Guido Cossu
7edf4c6c04
Added HMC utitities for the higher representations
...
TODO: Inherit types for the pseudofermions, Debugging, testing
2016-07-15 13:39:47 +01:00
paboyle
1a6c7204ac
Disable instantiation; Use cache version instead
2016-07-15 00:34:39 +01:00
paboyle
49310fbab3
Done with red black change over
2016-07-15 00:08:43 +01:00
paboyle
dfd714e1ef
Multiple implementations for the 5d hopping terms, depending on cache friendly
...
ops and/or the 5th direction being vectorised
All use 4d redblack.
2016-07-15 00:00:09 +01:00
paboyle
79a8ca1a62
Rewrite for performance. Impl dependent instantiations give
...
4d linalg impls of the 5d hopping terms (and inverse)
Cache friendly loop orderings of the above
Dense matrix stored and apply to the above
-- Switch to Ls vectorised, and use dense matrix approach for the MooeeInv
and rotate/shift of the Mooee M5D routines.
2016-07-14 23:58:15 +01:00
paboyle
fb45eb2eb2
5d ls vec rename of impl class
2016-07-14 23:57:26 +01:00
paboyle
a307274c96
Fermion impl rename for ls vectorised 5d approaches
2016-07-14 23:56:13 +01:00
paboyle
3f2c44a5fe
Updating the class to 5d selection based on impl type
2016-07-14 23:55:26 +01:00
paboyle
48fb1cdc11
Update domain 5d vectorised impl type, move the type over to 4d redblack with
...
the dense OO inverse
2016-07-14 23:54:35 +01:00
paboyle
8a79e93cc2
Rename the 5d domain wall fermion vectorised Ls impl class
2016-07-14 23:53:00 +01:00
paboyle
adbc7c1188
Adding files for multiple implementations (cache opt) and Ls vectorisation
...
of the 5D cayley form chiral fermions for the 5d matrix. With Ls entirely
in the vector direction, s-hopping terms involve rotations.
The serial dependence of the LDU inversion for Mobius and 4d even odd
checkerboarding is removed by simply applying Ls^2 operations (vectorised
many ways) as a dense matrix operation.
This should give similar throughput but high flops (non-compulsory flops)
but enable use of the KNL cache friendly kernels throughout the code.
Ls is still constrained to be a multiple of Nsimd, which is as much as 8 for AVX512
with single precision.
2016-07-14 22:59:21 +01:00
Guido Cossu
9dc345e8e8
Debugged smearing and adding HMC functions for hirep
2016-07-13 17:51:18 +01:00
Guido Cossu
a9ae30f868
Added representations definitions for the HMC
2016-07-12 13:36:10 +01:00
paboyle
ef97e32152
Adding persistent communicators
2016-07-08 17:16:08 +01:00
Guido Cossu
daea5297ee
Wrote the projector in the adjoint representation algebra
2016-07-08 16:14:16 +01:00
Guido Cossu
5028969d4b
Added generators for the adjoint representation
2016-07-08 15:40:11 +01:00
paboyle
a0676beeb1
Open up dependency on Eigen and FFTW
2016-07-07 22:31:07 +01:00
Guido Cossu
fbf96b1bbb
]Merge branch 'develop' into feature/hirep
2016-07-07 14:20:10 +01:00
Guido Cossu
3c49ddfaa4
Merge branch 'temporary-smearing' into develop
2016-07-07 14:04:59 +01:00
Guido Cossu
ffb8b3116c
Tested smeared RHMC Wilson1p1, accepting
2016-07-07 11:49:36 +01:00
Christopher Kelly
4774a3bcd2
Generalized HotConfiguration and functions it calls to accept gauge fields with precision other than the default.
2016-07-06 18:01:08 -04:00
Guido Cossu
e87182cf98
Debugged the copy constructor of the Lattice class
2016-07-06 15:31:00 +01:00
Guido Cossu
e3d5319470
Debugged the real() and imag() functions and added tests to Test_Simd
2016-07-06 14:16:03 +01:00
Guido Cossu
ffedeb1c58
Minor modifications
2016-07-06 11:41:27 +01:00
Guido Cossu
3e80947c2b
Cleaned up HMC output. Tested smeared HMCs for single precision (OK)
2016-07-05 12:03:54 +01:00
Guido Cossu
fdfbf11c6d
Merge branch 'develop' into temporary-smearing
2016-07-04 18:45:10 +01:00
Guido Cossu
9cb90f714e
Merge remote-tracking branch 'origin/develop' into temporary-smearing
2016-07-04 17:28:40 +01:00
Guido Cossu
2daffdf95d
Tested smeared WilsonRatio action, accepts
2016-07-04 16:17:28 +01:00
Guido Cossu
149f826601
Tested smearing for Nf2 WilsonFermionAction, non EO: accepts
2016-07-04 16:09:19 +01:00
Guido Cossu
cd8ee27080
Simple change in iGamma for smearing
2016-07-04 16:02:57 +01:00
Guido Cossu
0fa66e8f3c
Debugged smearing for EOWilson, accepts
2016-07-04 15:35:37 +01:00
Guido Cossu
8dd099267d
Corrected a bug in the Expression Templates (acso and asin were wrong)
2016-07-03 12:28:25 +01:00
Guido Cossu
1a6d65c6a4
Converted set_uw and set_fj to all complex functions
2016-07-03 10:27:43 +01:00
Guido Cossu
092fa0d8da
Debugged set_fj,
...
to be fixed: BUG in imag()
2016-07-01 16:06:20 +01:00
paboyle
680645f849
Merge branch 'release/v0.5.0'
2016-06-30 15:15:03 -07:00
paboyle
712b9a3489
Asm only for avx512
2016-06-30 14:35:02 -07:00
paboyle
bdaa5b1767
Updated to have perfect prefetching for the s-vectorised kernel with any cache blocking.
2016-06-30 14:35:02 -07:00
paboyle
8fcefc021a
Improved the prefetching when using cache blocking codes
2016-06-30 14:35:02 -07:00
paboyle
05c884a62a
Prefetch change
2016-06-30 14:35:01 -07:00
paboyle
2d8bb4c594
Tweaks
2016-06-30 14:35:01 -07:00
paboyle
6d58cb2a68
Enable reordering of the loops in the assembler for cache friendly.
...
This gets in the way of L2 prefetching however. Do next next link in stencil
prefetching.
2016-06-30 14:35:01 -07:00
Guido Cossu
565e9329ba
Changed the colouring classes
2016-06-30 16:51:03 +01:00
Guido Cossu
5e02392f9c
Fixed compilation error for benchmark_dwf
...
Some parts were assuming floating point precision
2016-06-20 12:30:51 +01:00
paboyle
87418e7df1
Slightly faster prefetching perf.
2016-06-13 02:32:52 -07:00
paboyle
55f65b81b5
Improvements to the assembler interface that let us move chunks of the
...
site and s loop into the kernels. This will save on function call overhead and
guarantee L2 prefetching strategy is right since OMP can't distribute the
sub-chunks of work.
2016-06-09 01:12:36 -07:00
Azusa Yamaguchi
d9408893b3
Prefetching in the normal kernel implementation.
2016-06-08 05:43:48 -07:00
paboyle
8ac021de73
Added a test an fixed it for red black precon Ls innermost vectorised DWF
2016-06-07 13:16:56 -07:00
paboyle
e503ef5590
Cleaned up
2016-06-07 00:11:36 +01:00
paboyle
a7682b0060
Only instantiate the one routine to avoid duplicate symbol under g++5/MacOS
2016-06-06 23:48:21 +01:00
paboyle
53d06046b0
Compiling updates for KNL
2016-06-03 03:47:54 -07:00
paboyle
139cc5f1ae
Large change with KNL preparation
2016-06-03 03:24:26 -07:00
c698b16d75
function to generate Chroma-style gamma matrix products
2016-05-01 18:30:35 -07:00
paboyle
5341977948
IMCI fixes. Thought I had committed these. The "real" disambiguation
...
between std::real and Grid::real shouldn't have been necessary and I don't
know why only the icpc v16.0 on babbage hits it.
May need a longer term rename of Grid::real or some careful EnableIf work.
2016-04-30 03:34:16 -07:00
f6c53e5039
Merge commit '1e554350acae0e67fa7177ed0db9d4f684a54af2'
2016-04-30 00:17:52 -07:00
6aa000176f
Fermion <-> Propagator functions
2016-04-30 00:14:33 -07:00
paboyle
1e554350ac
The threaded coms didn't agree with GCC. Suprised, and looks like GCC bug.
2016-04-29 16:49:18 -07:00
paboyle
c79ea0dcef
Fixingn IMCI
2016-04-22 21:52:54 -07:00
paboyle
8fd8bc25e9
simd 5th dim with rotation
2016-04-19 15:39:00 -07:00
paboyle
ba427abde9
simd 5d
2016-04-19 15:38:39 -07:00
paboyle
9b6ab6db16
simd in 5th dimension support
2016-04-19 15:38:01 -07:00
paboyle
806a83d38b
simd in fifth dim support for dwf
2016-04-19 15:36:19 -07:00
neo
339be37dba
Debugging smeared HMC
2016-04-13 17:00:14 +09:00
neo
a87b744621
HMC runs but does not accept with smearing on
2016-04-07 16:45:11 +09:00
paboyle
b1192a8908
Benchmark_zmm added
2016-04-06 03:00:07 -07:00
paboyle
e8dddb1596
Adding extra benchmark
2016-04-06 10:32:54 +01:00
97d0d56bcb
Debugging Smearing routines (set_fj)
2016-04-06 17:58:43 +09:00
7c7ea35ffb
Putting the Traceless Antihermitian part outside the deriv in pseudofermion actions
2016-04-05 16:28:09 +09:00
4b1cf580e0
Debugging the Smearing routines
2016-04-05 16:19:30 +09:00
paboyle
e67fc2be18
Adding a trial for openmp overhead minimisation
2016-03-31 16:00:37 +01:00
paboyle
8052556275
Cleaning up the single/double kernel implementation switch
2016-03-31 14:51:32 +01:00
paboyle
60d965f79e
AVX512 improvements; sigfpe trapping too
2016-03-30 08:42:34 +01:00
paboyle
1ecbf9794d
Merge branch 'master' of https://github.com/paboyle/Grid
2016-03-30 08:37:55 +01:00
paboyle
c77b7ee897
AddSub based alternate SU3 routine
2016-03-28 17:55:22 -06:00
paboyle
1e355a51e1
Interface change
2016-03-27 23:46:55 -07:00
paboyle
21abaf7e91
Gamma sign change
2016-03-28 00:35:45 -06:00
paboyle
165bffc2e7
Avx512 changes for assembler kernels
2016-03-26 22:25:45 -06:00
paboyle
644fd6d32e
Build avx512 clean
2016-03-25 09:35:33 -07:00
paboyle
60d4564151
ICC no compile fix
2016-03-16 02:30:40 -07:00
paboyle
090e7aa930
Merge remote-tracking branch 'origin/chulwoo-dec12-2015'
...
Merge Chulwoo's Lanczos related improvements.
Merge Nd!=4 fixes for pure gauge HMC from Evan.
2016-03-08 09:55:14 +00:00
paboyle
325e745daa
Merge branch 'master' of https://github.com/paboyle/Grid
2016-03-02 07:04:03 -08:00
paboyle
61413565d0
Back off the inlined spin proj as not working
2016-03-02 07:03:09 -08:00
2d8bb356e3
Smearing routines compile (still untested)
2016-02-25 02:43:59 +09:00
a7251f28c7
Stout smearing compiles (untested)
2016-02-24 03:16:50 +09:00
Antonin Portelli
497e7e4c53
BG/Q compatibility fix
2016-02-23 15:57:38 +00:00
Peter Boyle
6aeaf6f568
Parallel IO worked on. I'm puzzled because I already thought I shook this out on MacOS + OpenMPI and then
...
turned up problems on the BlueWaters Cray.
Gets 75MB/s from home filesystem on parallel configuration read. Need to make the RNG IO parallel,
and also to look at aggregating bigger writes for the parallel write.
Not sure what the home filesystem is.
2016-02-21 08:03:21 -06:00
Peter Boyle
40f2db9bc0
Disable metropolis step until 10 traj covered. Should move to exposing these
...
in XML input and start having "applications" directory.
2016-02-21 08:01:44 -06:00
Jung
9f0d9ade68
Added configure flag for LAPACK. Tested ImplicitlyRestartedLanczos::calc()
...
Checking in before cleaning up
2016-02-20 02:50:32 -05:00
neo
c1b1b89d17
More on smearing routines, writing APEsmear (dev)
2016-02-19 17:15:27 +09:00
neo
771235017d
Adding smearing routines (development)
2016-02-19 15:30:41 +09:00
paboyle
3425751cb8
Missing return value
2016-02-19 01:06:03 +00:00
Peter Boyle
22422a84d9
Small problem in compressor fix
2016-02-17 19:03:09 -06:00
Peter Boyle
c9fadf97a5
Simplify the compressor interface again.
2016-02-17 18:16:45 -06:00
Peter Boyle
81395e85d1
Regressing to not overlap comms and compute becasue bluewaters, edison, and cori are so rubbish at it.
2016-02-16 13:56:44 -06:00
Peter Boyle
a0fc47c6f9
Cheaper implementation
2016-02-15 16:02:36 -06:00
paboyle
e2f73e3ead
Updates for shmem
2016-02-10 16:50:32 -08:00
neo
6371676a75
Correcting some compilation errors for clang-sse
2016-02-10 11:37:03 +09:00
Jung
bd84c23298
definitions reconciled.
2016-01-25 16:30:59 -05:00
Jung
7aa8d5e8af
Faiing to compile, comparing with master
2016-01-25 16:03:02 -05:00
Jung
6012b0ec23
Checking in changes before changing to chulwoo-dec12-2015
2016-01-25 09:40:58 -05:00
Jung
411ac49dd7
GparityWilsonTM typedef added. Not yet tested
...
Conflicts:
configure
lib/qcd/action/fermion/WilsonKernels.h
2016-01-25 01:36:28 -05:00
Jung
5c57d4f403
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
...
Conflicts:
lib/qcd/action/fermion/WilsonKernels.h
2016-01-11 11:36:45 -05:00
paboyle
fc6ad65751
Pushed the overlap comms tweaks
2016-01-11 06:34:22 -08:00
paboyle
dafc74020c
Overlap comms compute improvements in hand op kernels, and better timing from Edison and Cori
2016-01-10 16:54:27 -08:00
paboyle
d19321dfde
Overlap comms compute changes
2016-01-10 19:20:16 +00:00
Jung
5924e5a562
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
...
Conflicts:
configure
lib/qcd/action/Actions.h
lib/qcd/action/fermion/WilsonKernels.h
2016-01-06 03:44:57 -05:00
paboyle
c99d748da6
Timing reports in benchmarks now reflect the asynch comms thread statistics
2016-01-04 14:42:16 +00:00
paboyle
02452afd36
Optional overlap of comms with compute
2016-01-04 14:18:40 +00:00
paboyle
331768dcff
Added overlap comms compute mode
2016-01-03 01:38:11 +00:00
paboyle
aae8bf31a7
Global edit adding copyright and license info to every source file.
2016-01-02 14:51:32 +00:00
paboyle
1e68b1c1bd
Create a benign default for gparity twists
2016-01-02 14:06:53 +00:00
paboyle
5a80930dd2
Charge conjugation boundary conditions for gauge fields implemented as a policy
...
class, changing the nature of covariant Cshifts used in
plaquettes, rectangles and staples.
As a result same code is used for the plaq and rect action independent of the BC type.
Should probably isolate the BC in a separate class that Gimpl takes as a template param.
Do the same with smearing policies.
This would then allow composition of BC with smearing etc....
2016-01-02 13:37:25 +00:00
paboyle
841a37f941
Fix to WilsonCompressor that fixes a bug in comms phase due to the sign change on gamma
...
matrix in hopping term.
Add logging of time spent in CG.
2015-12-29 23:49:41 +00:00
Azusa Yamaguchi
e6cad3821c
Logging improvement
2015-12-29 19:51:18 +00:00
Azusa Yamaguchi
98de1cbb6a
Optimised version of rectangle term staples.
...
~3.4x faster than the naive.
2015-12-29 19:22:59 +00:00
Azusa Yamaguchi
f7d61b8b81
Plaq plus rectangle and Iwasaki, Symanzik DBW2.
...
http://arxiv.org/pdf/hep-lat/0610075.pdf plaq and rect regress plausibly over 100 trajectories
and under HMC with average plaq and rectangle coming out ok.
2015-12-28 16:39:26 +00:00
Azusa Yamaguchi
78c4e862ef
Plaq, Rectangle, Iwasaki, Symanzik and DBW2 workign and HMC regresses to http://arxiv.org/pdf/hep-lat/0610075.pdf
2015-12-28 16:38:31 +00:00
paboyle
0afcf1cf13
Moved all the HMC tests over to using a single HmcRunner class that manages checkpoint strategies and such like
2015-12-22 11:19:25 +00:00
paboyle
08edbb5cbe
HMC bit repro across checkpoints. Fixed parallel RNG issue with threading.
...
Conclusion: c++11 distributions not thread safe and must us distinct dist as well as distinct engine
per site. Makes sense when you think of box muller. Also added a reset of dist on fill to ensure
repro across checkpoints.
2015-12-22 08:54:40 +00:00
paboyle
0abfbcc8eb
Naming of files improvement.
2015-12-21 15:37:26 +00:00
paboyle
1b94253ba4
Logging improvement
2015-12-21 15:36:28 +00:00
paboyle
36e6f9ac7b
Bug fix. Guess not initialised in refresh step; didn't hit before due to luck in not having a vector
...
created with NAN data.
2015-12-21 15:34:35 +00:00
paboyle
2f41691c11
Bug fix. Guess was not zeroed prior to CG call. Was earlier accidentally benign just due to luck.
2015-12-21 15:33:36 +00:00
paboyle
31ca609d12
HMC checkpointing .
...
Need a general HMC framework to work in restart.
2015-12-20 02:29:51 +00:00
paboyle
e108e708a3
Wilson TM tests and compiles in
2015-12-17 23:06:33 +00:00
paboyle
67ccb043f1
Added TM fermions for DSDR etc..
2015-12-17 22:34:28 +00:00
Jung
eb1759d7ea
Added Gparity instantiation to no HANDOPT case
...
deleted configure (as intended?)
2015-12-16 00:04:09 -05:00
paboyle
34a0fde2ad
Fixes to fermion force terms after sign of gamma_mu (0...3) change.
...
Thought I had already committed these.
Believe I have got the Gparity fermion force working.
* tests/Test_gpdwf_force.cc -- correctly predicts dS for two flavour pseudofermion
based on a small dt update of U field.
* tests/Test_hmc_EODWFRatio_Gparity.cc -- ran 1 trajectory on 8^4 with dH=0.21.
Need to accumulate a full plaquette log to believe fully which will take some hours of run time.
2015-12-15 23:14:12 +00:00
Jung
bc34b7e808
Merge branch 'master' of https://github.com/paboyle/Grid into scidac1_2
...
Conflicts:
lib/qcd/action/fermion/WilsonKernels.h
tests/Make.inc
2015-12-15 11:11:59 -05:00
Jung
284453c5e9
Added gparity mobius defs, added params to ScaledShamir
...
checking in before puling master
2015-12-14 12:15:06 -05:00
paboyle
3ce10aa975
Fix a regression failure on Mobius; chroma regression added
2015-12-10 22:55:00 +00:00
Jung
f2b4edc090
Fixes for Gparity comparison with CPS (Instantiation, Gamma matrix convention)
2015-12-07 02:04:57 -05:00
paboyle
b2c02a6106
Runs fastst on cori
2015-11-28 16:58:16 -08:00
paboyle
e9ff25b06b
Small threading change makes a difference on Cori.
2015-11-07 00:07:05 -08:00
