Merge pull request #412 from giltirn/patch/adaptive-wflow

Patch/adaptive wflow

Grid/GridCore.h

@@ -44,7 +44,8 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 #include <Grid/GridStd.h>
 #include <Grid/threads/Pragmas.h>
 #include <Grid/perfmon/Timer.h>
-#include <Grid/perfmon/PerfCount.h>
+#include <Grid/perfmon/Tracing.h>
+//#include <Grid/perfmon/PerfCount.h>
 #include <Grid/util/Util.h>
 #include <Grid/log/Log.h>
 #include <Grid/allocator/Allocator.h>

Grid/algorithms/iterative/ConjugateGradient.h

@@ -58,6 +58,7 @@ public:
 
   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) {
 
+    GRID_TRACE("ConjugateGradient");
     psi.Checkerboard() = src.Checkerboard();
 
     conformable(psi, src);
@@ -117,6 +118,7 @@ public:
     GridStopWatch MatrixTimer;
     GridStopWatch SolverTimer;
 
+    RealD usecs = -usecond();
     SolverTimer.Start();
     int k;
     for (k = 1; k <= MaxIterations; k++) {
@@ -166,14 +168,16 @@ public:
 
       // Stopping condition
       if (cp <= rsq) {
+	usecs +=usecond();
         SolverTimer.Stop();
         Linop.HermOpAndNorm(psi, mmp, d, qq);
         p = mmp - src;
-
+	GridBase *grid = src.Grid();
+	RealD DwfFlops = (1452. )*grid->gSites()*4*k
+   	               + (8+4+8+4+4)*12*grid->gSites()*k; // CG linear algebra
         RealD srcnorm = std::sqrt(norm2(src));
         RealD resnorm = std::sqrt(norm2(p));
         RealD true_residual = resnorm / srcnorm;
-
         std::cout << GridLogMessage << "ConjugateGradient Converged on iteration " << k 
 		  << "\tComputed residual " << std::sqrt(cp / ssq)
 		  << "\tTrue residual " << true_residual
@@ -187,6 +191,8 @@ public:
 	std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl;
 	std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl;
 
+	std::cout << GridLogMessage << "\tMobius flop rate " << DwfFlops/ usecs<< " Gflops " <<std::endl;
+
         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0);
 
 	IterationsToComplete = k;	

Grid/algorithms/iterative/ConjugateGradientMultiShift.h

@@ -84,6 +84,7 @@ public:
 
   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &psi)
   {
+    GRID_TRACE("ConjugateGradientMultiShift");
   
     GridBase *grid = src.Grid();
   

Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h

@@ -127,6 +127,7 @@ public:
 
   void operator() (LinearOperatorBase<FieldD> &Linop_d, const FieldD &src_d, std::vector<FieldD> &psi_d)
   { 
+    GRID_TRACE("ConjugateGradientMultiShiftMixedPrec");
     GridBase *DoublePrecGrid = src_d.Grid();
 
     ////////////////////////////////////////////////////////////////////////

Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h

@@ -73,6 +73,7 @@ public:
   }
     
   void operator()(const FieldD &src, FieldD &psi) {
+    GRID_TRACE("ConjugateGradientReliableUpdate");
     LinearOperatorBase<FieldF> *Linop_f_use = &Linop_f;
     bool using_fallback = false;
       

Grid/allocator/MemoryManager.cc

@@ -40,7 +40,7 @@ void MemoryManager::PrintBytes(void)
 //////////////////////////////////////////////////////////////////////
 MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax];
 int MemoryManager::Victim[MemoryManager::NallocType];
-int MemoryManager::Ncache[MemoryManager::NallocType] = { 2, 8, 2, 8, 2, 8 };
+int MemoryManager::Ncache[MemoryManager::NallocType] = { 2, 8, 8, 16, 8, 16 };
 uint64_t MemoryManager::CacheBytes[MemoryManager::NallocType];
 //////////////////////////////////////////////////////////////////////
 // Actual allocation and deallocation utils

Grid/allocator/MemoryManagerCache.cc

@@ -3,8 +3,14 @@
 
 #warning "Using explicit device memory copies"
 NAMESPACE_BEGIN(Grid);
-//#define dprintf(...) printf ( __VA_ARGS__ ); fflush(stdout);
-#define dprintf(...)
+
+#define MAXLINE 512
+static char print_buffer [ MAXLINE ];
+
+#define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer;
+//#define dprintf(...) printf (__VA_ARGS__ ); fflush(stdout);
+#define dprintf(...) 
+
 
 
 ////////////////////////////////////////////////////////////
@@ -104,7 +110,7 @@ void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
   ///////////////////////////////////////////////////////////
   assert(AccCache.state!=Empty);
   
-   dprintf("MemoryManager: Discard(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
+  mprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
   assert(AccCache.accLock==0);
   assert(AccCache.cpuLock==0);
   assert(AccCache.CpuPtr!=(uint64_t)NULL);
@@ -112,7 +118,7 @@ void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
     DeviceBytes   -=AccCache.bytes;
     LRUremove(AccCache);
-    dprintf("MemoryManager: Free(%llx) LRU %lld Total %lld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);  
+    dprintf("MemoryManager: Free(%lx) LRU %ld Total %ld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);  
   }
   uint64_t CpuPtr = AccCache.CpuPtr;
   EntryErase(CpuPtr);
@@ -126,7 +132,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
   ///////////////////////////////////////////////////////////////////////////
   assert(AccCache.state!=Empty);
   
-  dprintf("MemoryManager: Evict(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
+  mprintf("MemoryManager: Evict(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
   assert(AccCache.accLock==0);
   assert(AccCache.cpuLock==0);
   if(AccCache.state==AccDirty) {
@@ -137,7 +143,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
     DeviceBytes   -=AccCache.bytes;
     LRUremove(AccCache);
-    dprintf("MemoryManager: Free(%llx) footprint now %lld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);  
+    dprintf("MemoryManager: Free(%lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);  
   }
   uint64_t CpuPtr = AccCache.CpuPtr;
   EntryErase(CpuPtr);
@@ -150,7 +156,7 @@ void MemoryManager::Flush(AcceleratorViewEntry &AccCache)
   assert(AccCache.AccPtr!=(uint64_t)NULL);
   assert(AccCache.CpuPtr!=(uint64_t)NULL);
   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
-  dprintf("MemoryManager: Flush  %llx -> %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
+  mprintf("MemoryManager: Flush  %lx -> %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
   DeviceToHostBytes+=AccCache.bytes;
   DeviceToHostXfer++;
   AccCache.state=Consistent;
@@ -165,7 +171,7 @@ void MemoryManager::Clone(AcceleratorViewEntry &AccCache)
     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
     DeviceBytes+=AccCache.bytes;
   }
-  dprintf("MemoryManager: Clone %llx <- %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
+  mprintf("MemoryManager: Clone %lx <- %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
   HostToDeviceBytes+=AccCache.bytes;
   HostToDeviceXfer++;
@@ -241,7 +247,7 @@ uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMod
   assert(AccCache.cpuLock==0);  // Programming error
 
   if(AccCache.state!=Empty) {
-    dprintf("ViewOpen found entry %llx %llx : %lld %lld\n",
+    dprintf("ViewOpen found entry %lx %lx : %ld %ld\n",
 		    (uint64_t)AccCache.CpuPtr,
 		    (uint64_t)CpuPtr,
 		    (uint64_t)AccCache.bytes,

Grid/communicator/Communicator_base.h

@@ -107,6 +107,7 @@ public:
   ////////////////////////////////////////////////////////////////////////////////
   static int  RankWorld(void) ;
   static void BroadcastWorld(int root,void* data, int bytes);
+  static void BarrierWorld(void);
   
   ////////////////////////////////////////////////////////////
   // Reduction

Grid/communicator/Communicator_mpi3.cc

@@ -396,17 +396,17 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
     }
   }
   
-  if ( CommunicatorPolicy == CommunicatorPolicySequential ) {
-    this->StencilSendToRecvFromComplete(list,dir);
-    list.resize(0);
-  }
-
+  /*  if ( CommunicatorPolicy == CommunicatorPolicySequential ) {
+   *    this->StencilSendToRecvFromComplete(list,dir);
+   *    list.resize(0);
+   *  }
+   */
   return off_node_bytes;
 }
 void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir)
 {
-  //   std::cout << "Copy Synchronised\n"<<std::endl;
   acceleratorCopySynchronise();
+  StencilBarrier();// Synch shared memory on a single nodes
 
   int nreq=list.size();
 
@@ -443,6 +443,10 @@ int CartesianCommunicator::RankWorld(void){
   MPI_Comm_rank(communicator_world,&r);
   return r;
 }
+void CartesianCommunicator::BarrierWorld(void){
+  int ierr = MPI_Barrier(communicator_world);
+  assert(ierr==0);
+}
 void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes)
 {
   int ierr= MPI_Bcast(data,

Grid/communicator/Communicator_none.cc

@@ -104,6 +104,7 @@ int  CartesianCommunicator::RankWorld(void){return 0;}
 void CartesianCommunicator::Barrier(void){}
 void CartesianCommunicator::Broadcast(int root,void* data, int bytes) {}
 void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) { }
+void CartesianCommunicator::BarrierWorld(void) { }
 int  CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) {  return 0;}
 void CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor){  coor = _processor_coor; }
 void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest)

Grid/communicator/SharedMemoryMPI.cc

@@ -523,7 +523,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
   }
   if ( WorldRank == 0 ){
     std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes 
-	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
+	      << "bytes at "<< std::hex<< ShmCommBuf << " - "<<(bytes-1+(uint64_t)ShmCommBuf) <<std::dec<<" for comms buffers " <<std::endl;
   }
   SharedMemoryZero(ShmCommBuf,bytes);
   std::cout<< "Setting up IPC"<<std::endl;

Grid/lattice/Lattice_arith.h

@@ -36,6 +36,7 @@ NAMESPACE_BEGIN(Grid);
 //////////////////////////////////////////////////////////////////////////////////////////////////////
 template<class obj1,class obj2,class obj3> inline
 void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("mult");
   ret.Checkerboard() = lhs.Checkerboard();
   autoView( ret_v , ret, AcceleratorWrite);
   autoView( lhs_v , lhs, AcceleratorRead);
@@ -53,6 +54,7 @@ void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("mac");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(ret,rhs);
   conformable(lhs,rhs);
@@ -70,6 +72,7 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("sub");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(ret,rhs);
   conformable(lhs,rhs);
@@ -86,6 +89,7 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 }
 template<class obj1,class obj2,class obj3> inline
 void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("add");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(ret,rhs);
   conformable(lhs,rhs);
@@ -106,6 +110,7 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 //////////////////////////////////////////////////////////////////////////////////////////////////////
 template<class obj1,class obj2,class obj3> inline
 void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
+  GRID_TRACE("mult");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(lhs,ret);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -119,6 +124,7 @@ void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
+  GRID_TRACE("mac");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(ret,lhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -133,6 +139,7 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
+  GRID_TRACE("sub");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(ret,lhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -146,6 +153,7 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 }
 template<class obj1,class obj2,class obj3> inline
 void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
+  GRID_TRACE("add");
   ret.Checkerboard() = lhs.Checkerboard();
   conformable(lhs,ret);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -163,6 +171,7 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 //////////////////////////////////////////////////////////////////////////////////////////////////////
 template<class obj1,class obj2,class obj3> inline
 void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("mult");
   ret.Checkerboard() = rhs.Checkerboard();
   conformable(ret,rhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -177,6 +186,7 @@ void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("mac");
   ret.Checkerboard() = rhs.Checkerboard();
   conformable(ret,rhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -191,6 +201,7 @@ void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
   
 template<class obj1,class obj2,class obj3> inline
 void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("sub");
   ret.Checkerboard() = rhs.Checkerboard();
   conformable(ret,rhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -204,6 +215,7 @@ void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
 }
 template<class obj1,class obj2,class obj3> inline
 void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
+  GRID_TRACE("add");
   ret.Checkerboard() = rhs.Checkerboard();
   conformable(ret,rhs);
   autoView( ret_v , ret, AcceleratorWrite);
@@ -218,6 +230,7 @@ void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
   
 template<class sobj,class vobj> inline
 void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y){
+  GRID_TRACE("axpy");
   ret.Checkerboard() = x.Checkerboard();
   conformable(ret,x);
   conformable(x,y);
@@ -231,6 +244,7 @@ void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &
 }
 template<class sobj,class vobj> inline
 void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y){
+  GRID_TRACE("axpby");
   ret.Checkerboard() = x.Checkerboard();
   conformable(ret,x);
   conformable(x,y);
@@ -246,11 +260,13 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice
 template<class sobj,class vobj> inline
 RealD axpy_norm(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y)
 {
+  GRID_TRACE("axpy_norm");
     return axpy_norm_fast(ret,a,x,y);
 }
 template<class sobj,class vobj> inline
 RealD axpby_norm(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y)
 {
+  GRID_TRACE("axpby_norm");
     return axpby_norm_fast(ret,a,b,x,y);
 }
 

Grid/lattice/Lattice_base.h

@@ -117,6 +117,7 @@ public:
   ////////////////////////////////////////////////////////////////////////////////
   template <typename Op, typename T1> inline Lattice<vobj> & operator=(const LatticeUnaryExpression<Op,T1> &expr)
   {
+    GRID_TRACE("ExpressionTemplateEval");
     GridBase *egrid(nullptr);
     GridFromExpression(egrid,expr);
     assert(egrid!=nullptr);
@@ -140,6 +141,7 @@ public:
   }
   template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr)
   {
+    GRID_TRACE("ExpressionTemplateEval");
     GridBase *egrid(nullptr);
     GridFromExpression(egrid,expr);
     assert(egrid!=nullptr);
@@ -163,6 +165,7 @@ public:
   }
   template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr)
   {
+    GRID_TRACE("ExpressionTemplateEval");
     GridBase *egrid(nullptr);
     GridFromExpression(egrid,expr);
     assert(egrid!=nullptr);

Grid/lattice/Lattice_reduction.h

@@ -91,10 +91,7 @@ inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites)
   for(int i=0;i<nthread;i++){
     ssum = ssum+sumarray[i];
   } 
-  
-  typedef typename vobj::scalar_object ssobj;
-  ssobj ret = ssum;
-  return ret;
+  return ssum;
 }
 /*
 Threaded max, don't use for now
@@ -488,6 +485,14 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<
   int words = fd*sizeof(sobj)/sizeof(scalar_type);
   grid->GlobalSumVector(ptr, words);
 }
+template<class vobj> inline
+std::vector<typename vobj::scalar_object> 
+sliceSum(const Lattice<vobj> &Data,int orthogdim)
+{
+  std::vector<typename vobj::scalar_object> result;
+  sliceSum(Data,result,orthogdim);
+  return result;
+}
 
 template<class vobj>
 static void sliceInnerProductVector( std::vector<ComplexD> & result, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int orthogdim) 

Grid/log/Log.cc

@@ -68,6 +68,7 @@ GridLogger GridLogMessage(1, "Message", GridLogColours, "NORMAL");
 GridLogger GridLogMemory (1, "Memory", GridLogColours, "NORMAL");
 GridLogger GridLogDebug  (1, "Debug", GridLogColours, "PURPLE");
 GridLogger GridLogPerformance(1, "Performance", GridLogColours, "GREEN");
+GridLogger GridLogDslash     (1, "Dslash", GridLogColours, "BLUE");
 GridLogger GridLogIterative  (1, "Iterative", GridLogColours, "BLUE");
 GridLogger GridLogIntegrator (1, "Integrator", GridLogColours, "BLUE");
 GridLogger GridLogHMC (1, "HMC", GridLogColours, "BLUE");
@@ -80,6 +81,7 @@ void GridLogConfigure(std::vector<std::string> &logstreams) {
   GridLogIterative.Active(0);
   GridLogDebug.Active(0);
   GridLogPerformance.Active(0);
+  GridLogDslash.Active(0);
   GridLogIntegrator.Active(1);
   GridLogColours.Active(0);
   GridLogHMC.Active(1);
@@ -91,6 +93,7 @@ void GridLogConfigure(std::vector<std::string> &logstreams) {
     if (logstreams[i] == std::string("Iterative"))   GridLogIterative.Active(1);
     if (logstreams[i] == std::string("Debug"))       GridLogDebug.Active(1);
     if (logstreams[i] == std::string("Performance")) GridLogPerformance.Active(1);
+    if (logstreams[i] == std::string("Dslash"))      GridLogDslash.Active(1);
     if (logstreams[i] == std::string("NoIntegrator"))  GridLogIntegrator.Active(0);
     if (logstreams[i] == std::string("NoHMC"))         GridLogHMC.Active(0);
     if (logstreams[i] == std::string("Colours"))     GridLogColours.Active(1);

Grid/log/Log.h

@@ -138,7 +138,8 @@ public:
         stream << std::setw(log.topWidth);
       }
       stream << log.topName << log.background()<< " : ";
-      stream << log.colour() <<  std::left;
+      //      stream << log.colour() <<  std::left;
+      stream <<  std::left;
       if (log.chanWidth > 0)
       {
         stream << std::setw(log.chanWidth);
@@ -153,9 +154,9 @@ public:
 	stream << log.evidence()
 	       << now	       << log.background() << " : " ;
       }
-      stream << log.colour();
+      //      stream << log.colour();
+      stream <<  std::right;
       stream.flags(f);
-
       return stream;
     } else { 
       return devnull;
@@ -180,6 +181,7 @@ extern GridLogger GridLogWarning;
 extern GridLogger GridLogMessage;
 extern GridLogger GridLogDebug  ;
 extern GridLogger GridLogPerformance;
+extern GridLogger GridLogDslash;
 extern GridLogger GridLogIterative  ;
 extern GridLogger GridLogIntegrator  ;
 extern GridLogger GridLogHMC;

Grid/perfmon/PerfCount.cc

@@ -27,10 +27,13 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 /*  END LEGAL */
 
 #include <Grid/GridCore.h>
-#include <Grid/perfmon/PerfCount.h>
 
+#include <Grid/perfmon/Timer.h>
+#include <Grid/perfmon/PerfCount.h>
 NAMESPACE_BEGIN(Grid);
 
+GridTimePoint theProgramStart = GridClock::now();
+
 #define CacheControl(L,O,R) ((PERF_COUNT_HW_CACHE_##L)|(PERF_COUNT_HW_CACHE_OP_##O<<8)| (PERF_COUNT_HW_CACHE_RESULT_##R<<16))
 #define RawConfig(A,B) (A<<8|B)
 const PerformanceCounter::PerformanceCounterConfig PerformanceCounter::PerformanceCounterConfigs [] = {

Grid/perfmon/Timer.h

@@ -35,17 +35,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 
 NAMESPACE_BEGIN(Grid)
 
-// Dress the output; use std::chrono
-// C++11 time facilities better?
-inline double usecond(void) {
-  struct timeval tv;
-  tv.tv_sec = 0;
-  tv.tv_usec = 0;
-  gettimeofday(&tv,NULL);
-  return 1.0*tv.tv_usec + 1.0e6*tv.tv_sec;
-}
-
-typedef  std::chrono::system_clock          GridClock;
+//typedef  std::chrono::system_clock          GridClock;
+typedef  std::chrono::high_resolution_clock   GridClock;
 typedef  std::chrono::time_point<GridClock> GridTimePoint;
 
 typedef  std::chrono::seconds               GridSecs;
@@ -53,6 +44,15 @@ typedef  std::chrono::milliseconds          GridMillisecs;
 typedef  std::chrono::microseconds          GridUsecs;
 typedef  std::chrono::microseconds          GridTime;
 
+extern GridTimePoint theProgramStart;
+// Dress the output; use std::chrono
+// C++11 time facilities better?
+inline double usecond(void) {
+  auto usecs = std::chrono::duration_cast<GridUsecs>(GridClock::now()-theProgramStart); 
+  return 1.0*usecs.count();
+}
+
+
 inline std::ostream& operator<< (std::ostream & stream, const GridSecs & time)
 {
   stream << time.count()<<" s";

Grid/perfmon/Tracing.h

@@ -0,0 +1,66 @@
+#pragma once
+#ifdef GRID_TRACING_NVTX
+#include <nvToolsExt.h>
+class GridTracer {
+public:
+  GridTracer(const char* name) {
+    nvtxRangePushA(name);
+  }
+  ~GridTracer() {
+    nvtxRangePop();
+  }
+};
+inline void tracePush(const char *name) { nvtxRangePushA(name); }
+inline void tracePop(const char *name) { nvtxRangePop(); }
+inline int  traceStart(const char *name) {  }
+inline void traceStop(int ID) {  }
+#endif
+
+#ifdef GRID_TRACING_ROCTX
+#include <roctracer/roctx.h>
+class GridTracer {
+ public:
+  GridTracer(const char* name) {
+    roctxRangePushA(name);
+    std::cout << "roctxRangePush "<<name<<std::endl;
+  }
+  ~GridTracer() {
+    roctxRangePop();
+    std::cout << "roctxRangePop "<<std::endl;
+  }
+};
+inline void tracePush(const char *name) { roctxRangePushA(name); }
+inline void tracePop(const char *name) { roctxRangePop(); }
+inline int  traceStart(const char *name) { roctxRangeStart(name); }
+inline void traceStop(int ID) { roctxRangeStop(ID); }
+#endif
+
+#ifdef GRID_TRACING_TIMER
+class GridTracer {
+ public:
+  const char *name;
+  double elapsed;
+  GridTracer(const char* _name) {
+    name = _name;
+    elapsed=-usecond();
+  }
+  ~GridTracer() {
+    elapsed+=usecond();
+    std::cout << GridLogTracing << name << " took " <<elapsed<< " us" <<std::endl;
+  }
+};
+inline void tracePush(const char *name) {  }
+inline void tracePop(const char *name) {  }
+inline int  traceStart(const char *name) { return 0; }
+inline void traceStop(int ID) {  }
+#endif
+
+#ifdef GRID_TRACING_NONE
+#define GRID_TRACE(name) 
+inline void tracePush(const char *name) {  }
+inline void tracePop(const char *name) {  }
+inline int  traceStart(const char *name) { return 0;  }
+inline void traceStop(int ID) {  }
+#else
+#define GRID_TRACE(name) GridTracer uniq_name_using_macros##__COUNTER__(name);
+#endif

Grid/qcd/action/ActionBase.h

@@ -42,6 +42,8 @@ public:
   bool is_smeared = false;
   RealD deriv_norm_sum;
   RealD deriv_max_sum;
+  RealD Fdt_norm_sum;
+  RealD Fdt_max_sum;
   int   deriv_num;
   RealD deriv_us;
   RealD S_us;
@@ -50,13 +52,21 @@ public:
     deriv_us = S_us = refresh_us = 0.0;
     deriv_num=0;
     deriv_norm_sum = deriv_max_sum=0.0;
+    Fdt_max_sum =  Fdt_norm_sum = 0.0;
   }
-  void  deriv_log(RealD nrm, RealD max) { deriv_max_sum+=max; deriv_norm_sum+=nrm; deriv_num++;}
-  RealD deriv_max_average(void)         { return deriv_max_sum/deriv_num; };
-  RealD deriv_norm_average(void)        { return deriv_norm_sum/deriv_num; };
+  void  deriv_log(RealD nrm, RealD max,RealD Fdt_nrm,RealD Fdt_max) {
+    deriv_max_sum+=max;
+    deriv_norm_sum+=nrm;
+    Fdt_max_sum+=Fdt_max;
+    Fdt_norm_sum+=Fdt_nrm; deriv_num++;
+  }
+  RealD deriv_max_average(void)       { return deriv_max_sum/deriv_num; };
+  RealD deriv_norm_average(void)      { return deriv_norm_sum/deriv_num; };
+  RealD Fdt_max_average(void)         { return Fdt_max_sum/deriv_num; };
+  RealD Fdt_norm_average(void)        { return Fdt_norm_sum/deriv_num; };
   RealD deriv_timer(void)        { return deriv_us; };
-  RealD S_timer(void)            { return deriv_us; };
-  RealD refresh_timer(void)      { return deriv_us; };
+  RealD S_timer(void)            { return S_us; };
+  RealD refresh_timer(void)      { return refresh_us; };
   void deriv_timer_start(void)   { deriv_us-=usecond(); }
   void deriv_timer_stop(void)    { deriv_us+=usecond(); }
   void refresh_timer_start(void) { refresh_us-=usecond(); }
@@ -66,6 +76,7 @@ public:
   // Heatbath?
   virtual void refresh(const GaugeField& U, GridSerialRNG &sRNG, GridParallelRNG& pRNG) = 0; // refresh pseudofermions
   virtual RealD S(const GaugeField& U) = 0;                             // evaluate the action
+  virtual RealD Sinitial(const GaugeField& U) { return this->S(U); } ;  // if the refresh computes the action, can cache it. Alternately refreshAndAction() ?
   virtual void deriv(const GaugeField& U, GaugeField& dSdU) = 0;        // evaluate the action derivative
   virtual std::string action_name()    = 0;                             // return the action name
   virtual std::string LogParameters()  = 0;                             // prints action parameters

Grid/qcd/action/ActionParams.h

@@ -39,7 +39,7 @@ struct GparityWilsonImplParams {
   Coordinate twists;
                      //mu=Nd-1 is assumed to be the time direction and a twist value of 1 indicates antiperiodic BCs
   Coordinate dirichlet; // Blocksize of dirichlet BCs
-  GparityWilsonImplParams() : twists(Nd, 0), dirichlet(Nd, 0) {};
+  GparityWilsonImplParams() : twists(Nd, 0) { dirichlet.resize(0); };
 };
   
 struct WilsonImplParams {
@@ -48,13 +48,13 @@ struct WilsonImplParams {
   AcceleratorVector<Real,Nd> twist_n_2pi_L;
   AcceleratorVector<Complex,Nd> boundary_phases;
   WilsonImplParams()  {
-    dirichlet.resize(Nd,0);
+    dirichlet.resize(0);
     boundary_phases.resize(Nd, 1.0);
       twist_n_2pi_L.resize(Nd, 0.0);
   };
   WilsonImplParams(const AcceleratorVector<Complex,Nd> phi) : boundary_phases(phi), overlapCommsCompute(false) {
     twist_n_2pi_L.resize(Nd, 0.0);
-    dirichlet.resize(Nd,0);
+    dirichlet.resize(0);
   }
 };
 
@@ -62,7 +62,7 @@ struct StaggeredImplParams {
   Coordinate dirichlet; // Blocksize of dirichlet BCs
   StaggeredImplParams()
   {
-    dirichlet.resize(Nd,0);
+    dirichlet.resize(0);
   };
 };
   

Grid/qcd/action/fermion/CayleyFermion5D.h

@@ -183,16 +183,6 @@ public:
 		  GridRedBlackCartesian &FourDimRedBlackGrid,
 		  RealD _mass,RealD _M5,const ImplParams &p= ImplParams());
 
-  void CayleyReport(void);
-  void CayleyZeroCounters(void);
-
-  double M5Dflops;
-  double M5Dcalls;
-  double M5Dtime;
-
-  double MooeeInvFlops;
-  double MooeeInvCalls;
-  double MooeeInvTime;
 
 protected:
   virtual void SetCoefficientsZolotarev(RealD zolohi,Approx::zolotarev_data *zdata,RealD b,RealD c);

Grid/qcd/action/fermion/ImprovedStaggeredFermion.h

@@ -47,18 +47,6 @@ public:
   FermionField _tmp;
   FermionField &tmp(void) { return _tmp; }
 
-  ////////////////////////////////////////
-  // Performance monitoring
-  ////////////////////////////////////////
-  void Report(void);
-  void ZeroCounters(void);
-  double DhopTotalTime;
-  double DhopCalls;
-  double DhopCommTime;
-  double DhopComputeTime;
-  double DhopComputeTime2;
-  double DhopFaceTime;
-
   ///////////////////////////////////////////////////////////////
   // Implement the abstract base
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h

@@ -52,18 +52,6 @@ public:
   FermionField _tmp;
   FermionField &tmp(void) { return _tmp; }
 
-  ////////////////////////////////////////
-  // Performance monitoring
-  ////////////////////////////////////////
-  void Report(void);
-  void ZeroCounters(void);
-  double DhopTotalTime;
-  double DhopCalls;
-  double DhopCommTime;
-  double DhopComputeTime;
-  double DhopComputeTime2;
-  double DhopFaceTime;
-
   ///////////////////////////////////////////////////////////////
   // Implement the abstract base
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/NaiveStaggeredFermion.h

@@ -47,18 +47,6 @@ public:
   FermionField _tmp;
   FermionField &tmp(void) { return _tmp; }
 
-  ////////////////////////////////////////
-  // Performance monitoring
-  ////////////////////////////////////////
-  void Report(void);
-  void ZeroCounters(void);
-  double DhopTotalTime;
-  double DhopCalls;
-  double DhopCommTime;
-  double DhopComputeTime;
-  double DhopComputeTime2;
-  double DhopFaceTime;
-
   ///////////////////////////////////////////////////////////////
   // Implement the abstract base
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/WilsonCompressor.h

@@ -294,11 +294,7 @@ public:
   typedef typename Base::View_type View_type;
   typedef typename Base::StencilVector StencilVector;
 
-  void ZeroCountersi(void)  {  }
-  void Reporti(int calls)  {  }
-
   //  Vector<int> surface_list;
-
   WilsonStencil(GridBase *grid,
 		int npoints,
 		int checkerboard,
@@ -306,7 +302,6 @@ public:
 		const std::vector<int> &distances,Parameters p)  
     : CartesianStencil<vobj,cobj,Parameters> (grid,npoints,checkerboard,directions,distances,p) 
   { 
-    ZeroCountersi();
     //    surface_list.resize(0);
     this->same_node.resize(npoints);
   };
@@ -400,7 +395,6 @@ public:
     }
     this->face_table_computed=1;
     assert(this->u_comm_offset==this->_unified_buffer_size);
-    accelerator_barrier();
   }
 
 };

Grid/qcd/action/fermion/WilsonFermion.h

@@ -74,20 +74,6 @@ public:
   FermionField _tmp;
   FermionField &tmp(void) { return _tmp; }
 
-  void Report(void);
-  void ZeroCounters(void);
-  double DhopCalls;
-  double DhopCommTime;
-  double DhopComputeTime;
-  double DhopComputeTime2;
-  double DhopFaceTime;
-  double DhopTotalTime;
-
-  double DerivCalls;
-  double DerivCommTime;
-  double DerivComputeTime;
-  double DerivDhopComputeTime;
-
   //////////////////////////////////////////////////////////////////
   // override multiply; cut number routines if pass dagger argument
   // and also make interface more uniformly consistent

Grid/qcd/action/fermion/WilsonFermion5D.h

@@ -78,21 +78,6 @@ public:
   int Dirichlet;
   Coordinate Block; 
 
-  /********** Deprecate timers **********/
-  void Report(void);
-  void ZeroCounters(void);
-  double DhopCalls;
-  double DhopCommTime;
-  double DhopComputeTime;
-  double DhopComputeTime2;
-  double DhopFaceTime;
-  double DhopTotalTime;
-
-  double DerivCalls;
-  double DerivCommTime;
-  double DerivComputeTime;
-  double DerivDhopComputeTime;
-
   ///////////////////////////////////////////////////////////////
   // Implement the abstract base
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/implementation/CayleyFermion5DImplementation.h

@@ -152,58 +152,6 @@ void CayleyFermion5D<Impl>::DminusDag(const FermionField &psi, FermionField &chi
   }
 }
 
-template<class Impl> void CayleyFermion5D<Impl>::CayleyReport(void)
-{
-  this->Report();
-  Coordinate latt = GridDefaultLatt();          
-  RealD volume = this->Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-  RealD NP     = this->_FourDimGrid->_Nprocessors;
-  if ( M5Dcalls > 0 ) {
-    std::cout << GridLogMessage << "#### M5D calls report " << std::endl;
-    std::cout << GridLogMessage << "CayleyFermion5D Number of M5D Calls     : " << M5Dcalls   << std::endl;
-    std::cout << GridLogMessage << "CayleyFermion5D ComputeTime/Calls       : " << M5Dtime / M5Dcalls << " us" << std::endl;
-
-    // Flops = 10.0*(Nc*Ns) *Ls*vol
-    RealD mflops = 10.0*(Nc*Ns)*volume*M5Dcalls/M5Dtime/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-
-    // Bytes = sizeof(Real) * (Nc*Ns*Nreim) * Ls * vol * (read+write) (/2 for red black counting)
-    // read = 2 ( psi[ss+s+1] and psi[ss+s-1] count as 1 )
-    // write = 1
-    RealD Gbytes = sizeof(Real) * (Nc*Ns*2) * volume * 3 /2. * 1.e-9;
-    std::cout << GridLogMessage << "Average bandwidth (GB/s)                 : " << Gbytes/M5Dtime*M5Dcalls*1.e6 << std::endl;
-  }
-
-  if ( MooeeInvCalls > 0 ) {
-
-    std::cout << GridLogMessage << "#### MooeeInv calls report " << std::endl;
-    std::cout << GridLogMessage << "CayleyFermion5D Number of MooeeInv Calls     : " << MooeeInvCalls   << std::endl;
-    std::cout << GridLogMessage << "CayleyFermion5D ComputeTime/Calls            : " << MooeeInvTime / MooeeInvCalls << " us" << std::endl;
-#ifdef GRID_CUDA
-    RealD mflops = ( -16.*Nc*Ns+this->Ls*(1.+18.*Nc*Ns) )*volume*MooeeInvCalls/MooeeInvTime/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-#else
-    // Flops = MADD * Ls *Ls *4dvol * spin/colour/complex
-    RealD mflops = 2.0*24*this->Ls*volume*MooeeInvCalls/MooeeInvTime/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-#endif
-  }
-
-}
-template<class Impl> void CayleyFermion5D<Impl>::CayleyZeroCounters(void)
-{
-  this->ZeroCounters();
-  M5Dflops=0;
-  M5Dcalls=0;
-  M5Dtime=0;
-  MooeeInvFlops=0;
-  MooeeInvCalls=0;
-  MooeeInvTime=0;
-}
-
 template<class Impl>  
 void CayleyFermion5D<Impl>::M5D   (const FermionField &psi, FermionField &chi)
 {
@@ -646,7 +594,6 @@ void CayleyFermion5D<Impl>::ContractConservedCurrent( PropagatorField &q_in_1,
   assert(mass_plus == mass_minus);
   RealD mass = mass_plus;
   
-#if (!defined(GRID_HIP))
   Gamma::Algebra Gmu [] = {
     Gamma::Algebra::GammaX,
     Gamma::Algebra::GammaY,
@@ -765,7 +712,7 @@ void CayleyFermion5D<Impl>::ContractConservedCurrent( PropagatorField &q_in_1,
     else          q_out +=     C;
     
   }
-#endif
+
 }
 
 template <class Impl>
@@ -832,7 +779,6 @@ void CayleyFermion5D<Impl>::SeqConservedCurrent(PropagatorField &q_in,
   }
 #endif
 
-#if (!defined(GRID_HIP))
   int tshift = (mu == Nd-1) ? 1 : 0;
   unsigned int LLt    = GridDefaultLatt()[Tp];
   ////////////////////////////////////////////////
@@ -952,7 +898,6 @@ void CayleyFermion5D<Impl>::SeqConservedCurrent(PropagatorField &q_in,
 
     InsertSlice(L_Q, q_out, s , 0);
   }
-#endif
 }
 #undef Pp
 #undef Pm

Grid/qcd/action/fermion/implementation/CayleyFermion5Dcache.h

@@ -63,9 +63,6 @@ CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
 
   // 10 = 3 complex mult + 2 complex add
   // Flops = 10.0*(Nc*Ns) *Ls*vol (/2 for red black counting)
-  M5Dcalls++;
-  M5Dtime-=usecond();
-
   uint64_t nloop = grid->oSites();
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t s = sss%Ls;
@@ -78,7 +75,6 @@ CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
     spProj5p(tmp2,psi(idx_l));
     coalescedWrite(chi[ss+s],pdiag[s]*phi(ss+s)+pupper[s]*tmp1+plower[s]*tmp2);
   });
-  M5Dtime+=usecond();
 }
 
 template<class Impl>  
@@ -104,9 +100,6 @@ CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
   int Ls=this->Ls;
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  M5Dcalls++;
-  M5Dtime-=usecond();
-
   uint64_t nloop = grid->oSites();
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t s = sss%Ls;
@@ -119,7 +112,6 @@ CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
     spProj5m(tmp2,psi(idx_l));
     coalescedWrite(chi[ss+s],pdiag[s]*phi(ss+s)+pupper[s]*tmp1+plower[s]*tmp2);
   });
-  M5Dtime+=usecond();
 }
 
 template<class Impl>
@@ -140,8 +132,6 @@ CayleyFermion5D<Impl>::MooeeInv    (const FermionField &psi_i, FermionField &chi
   auto pleem = & leem[0];
   auto pueem = & ueem[0];
 
-  MooeeInvCalls++;
-  MooeeInvTime-=usecond();
   uint64_t nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -178,8 +168,6 @@ CayleyFermion5D<Impl>::MooeeInv    (const FermionField &psi_i, FermionField &chi
       coalescedWrite(chi[ss+s],res);
     }
   });
-
-  MooeeInvTime+=usecond();
   
 }
 
@@ -202,10 +190,6 @@ CayleyFermion5D<Impl>::MooeeInvDag (const FermionField &psi_i, FermionField &chi
 
   assert(psi.Checkerboard() == psi.Checkerboard());
 
-  MooeeInvCalls++;
-  MooeeInvTime-=usecond();
-
-
   uint64_t nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -242,7 +226,6 @@ CayleyFermion5D<Impl>::MooeeInvDag (const FermionField &psi_i, FermionField &chi
       coalescedWrite(chi[ss+s],res);
     }
   });
-  MooeeInvTime+=usecond();
 
 }
 

Grid/qcd/action/fermion/implementation/CayleyFermion5Dvec.h

@@ -94,10 +94,6 @@ CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
       d_p[ss] = diag[s];
     }}
 
-
-  M5Dcalls++;
-  M5Dtime-=usecond();
-
   assert(Nc==3);
 
   thread_loop( (int ss=0;ss<grid->oSites();ss+=LLs),{ // adds LLs
@@ -198,7 +194,6 @@ CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
     }
 #endif
   });
-  M5Dtime+=usecond();
 }
 
 template<class Impl>  
@@ -242,8 +237,6 @@ CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
       d_p[ss] = diag[s];
     }}
 
-  M5Dcalls++;
-  M5Dtime-=usecond();
   thread_loop( (int ss=0;ss<grid->oSites();ss+=LLs),{ // adds LLs
 #if 0
     alignas(64) SiteHalfSpinor hp;
@@ -339,7 +332,6 @@ CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
     }
 #endif
   });
-  M5Dtime+=usecond();
 }
 
 
@@ -813,9 +805,6 @@ CayleyFermion5D<Impl>::MooeeInternal(const FermionField &psi, FermionField &chi,
   }
   assert(_Matp->size()==Ls*LLs);
 
-  MooeeInvCalls++;
-  MooeeInvTime-=usecond();
-
   if ( switcheroo<Coeff_t>::iscomplex() ) {
     thread_loop( (auto site=0;site<vol;site++),{
       MooeeInternalZAsm(psi,chi,LLs,site,*_Matp,*_Matm);
@@ -825,7 +814,7 @@ CayleyFermion5D<Impl>::MooeeInternal(const FermionField &psi, FermionField &chi,
       MooeeInternalAsm(psi,chi,LLs,site,*_Matp,*_Matm);
     });
   }
-  MooeeInvTime+=usecond();
+
 }
 
 NAMESPACE_END(Grid);

Grid/qcd/action/fermion/implementation/DomainWallEOFAFermionCache.h

@@ -54,8 +54,6 @@ void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi_i, const FermionFi
   auto pupper = &upper[0];
   auto plower = &lower[0];
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
   
   auto nloop=grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -71,7 +69,6 @@ void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi_i, const FermionFi
     }
   });
 
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -91,8 +88,6 @@ void DomainWallEOFAFermion<Impl>::M5Ddag(const FermionField& psi_i, const Fermio
   auto plower = &lower[0];
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
 
   auto nloop=grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -108,7 +103,6 @@ void DomainWallEOFAFermion<Impl>::M5Ddag(const FermionField& psi_i, const Fermio
     }
   });
 
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -127,8 +121,6 @@ void DomainWallEOFAFermion<Impl>::MooeeInv(const FermionField& psi_i, FermionFie
   auto pleem = & this->leem[0];
   auto pueem = & this->ueem[0];
 
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
   uint64_t nloop=grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -164,7 +156,6 @@ void DomainWallEOFAFermion<Impl>::MooeeInv(const FermionField& psi_i, FermionFie
       coalescedWrite(chi[ss+s],res);
     }
   });
-  this->MooeeInvTime += usecond();
 }
 
 template<class Impl>
@@ -185,8 +176,6 @@ void DomainWallEOFAFermion<Impl>::MooeeInvDag(const FermionField& psi_i, Fermion
 
   assert(psi.Checkerboard() == psi.Checkerboard());
 
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
   auto nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -223,7 +212,6 @@ void DomainWallEOFAFermion<Impl>::MooeeInvDag(const FermionField& psi_i, Fermion
     }
   });
 
-  this->MooeeInvTime += usecond();
 }
 
 NAMESPACE_END(Grid);

Grid/qcd/action/fermion/implementation/ImprovedStaggeredFermion5DImplementation.h

@@ -298,45 +298,33 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl &
   int LLs = in.Grid()->_rdimensions[0];
   int len =  U.Grid()->oSites();
 
-  DhopFaceTime-=usecond();
   st.Prepare();
   st.HaloGather(in,compressor);
-  DhopFaceTime+=usecond();
 
-  DhopCommTime -=usecond();
   std::vector<std::vector<CommsRequest_t> > requests;
   st.CommunicateBegin(requests);
 
   //  st.HaloExchangeOptGather(in,compressor); // Wilson compressor
-  DhopFaceTime-=usecond();
   st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms
-  DhopFaceTime+=usecond();
 
   //////////////////////////////////////////////////////////////////////////////////////////////////////
   // Remove explicit thread mapping introduced for OPA reasons.
   //////////////////////////////////////////////////////////////////////////////////////////////////////
-  DhopComputeTime-=usecond();
   {
     int interior=1;
     int exterior=0;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime+=usecond();
 
-  DhopFaceTime-=usecond();
   st.CommsMerge(compressor);
-  DhopFaceTime+=usecond();
 
   st.CommunicateComplete(requests);
-  DhopCommTime +=usecond();
 
-  DhopComputeTime2-=usecond();
   {
     int interior=0;
     int exterior=1;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime2+=usecond();
 }
 
 template<class Impl>
@@ -347,22 +335,14 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st,
   Compressor compressor;
   int LLs = in.Grid()->_rdimensions[0];
 
- //double t1=usecond();
-  DhopTotalTime -= usecond();
-  DhopCommTime -= usecond();
   st.HaloExchange(in,compressor);
-  DhopCommTime += usecond();
   
-  DhopComputeTime -= usecond();
   // Dhop takes the 4d grid from U, and makes a 5d index for fermion
   {
     int interior=1;
     int exterior=1;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime += usecond();
-  DhopTotalTime   += usecond();
-
 }
 /*CHANGE END*/
 
@@ -371,7 +351,6 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st,
 template<class Impl>
 void ImprovedStaggeredFermion5D<Impl>::DhopOE(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls+=1;
   conformable(in.Grid(),FermionRedBlackGrid());    // verifies half grid
   conformable(in.Grid(),out.Grid()); // drops the cb check
 
@@ -383,7 +362,6 @@ void ImprovedStaggeredFermion5D<Impl>::DhopOE(const FermionField &in, FermionFie
 template<class Impl>
 void ImprovedStaggeredFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls+=1;
   conformable(in.Grid(),FermionRedBlackGrid());    // verifies half grid
   conformable(in.Grid(),out.Grid()); // drops the cb check
 
@@ -395,7 +373,6 @@ void ImprovedStaggeredFermion5D<Impl>::DhopEO(const FermionField &in, FermionFie
 template<class Impl>
 void ImprovedStaggeredFermion5D<Impl>::Dhop(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls+=2;
   conformable(in.Grid(),FermionGrid()); // verifies full grid
   conformable(in.Grid(),out.Grid());
 
@@ -404,58 +381,6 @@ void ImprovedStaggeredFermion5D<Impl>::Dhop(const FermionField &in, FermionField
   DhopInternal(Stencil,Lebesgue,Umu,UUUmu,in,out,dag);
 }
 
-template<class Impl>
-void ImprovedStaggeredFermion5D<Impl>::Report(void) 
-{
-  Coordinate latt = GridDefaultLatt();          
-  RealD volume = Ls;  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-  RealD NP = _FourDimGrid->_Nprocessors;
-  RealD NN = _FourDimGrid->NodeCount();
-
-  std::cout << GridLogMessage << "#### Dhop calls report " << std::endl;
-
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D Number of DhopEO Calls   : " 
-	    << DhopCalls   << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D TotalTime   /Calls       : " 
-	    << DhopTotalTime   / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D CommTime    /Calls       : " 
-	    << DhopCommTime    / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D ComputeTime/Calls        : " 
-	    << DhopComputeTime / DhopCalls << " us" << std::endl;
-
-  // Average the compute time
-  _FourDimGrid->GlobalSum(DhopComputeTime);
-  DhopComputeTime/=NP;
-
-  RealD mflops = 1154*volume*DhopCalls/DhopComputeTime/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NN << std::endl;
-  
-  RealD Fullmflops = 1154*volume*DhopCalls/(DhopTotalTime)/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank (full): " << Fullmflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NN << std::endl;
-
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D Stencil"    <<std::endl;  Stencil.Report();
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D StencilEven"<<std::endl;  StencilEven.Report();
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion5D StencilOdd" <<std::endl;  StencilOdd.Report();
-}
-template<class Impl>
-void ImprovedStaggeredFermion5D<Impl>::ZeroCounters(void) 
-{
-  DhopCalls       = 0;
-  DhopTotalTime    = 0;
-  DhopCommTime    = 0;
-  DhopComputeTime = 0;
-  DhopFaceTime    = 0;
-
-
-  Stencil.ZeroCounters();
-  StencilEven.ZeroCounters();
-  StencilOdd.ZeroCounters();
-}
-
 /////////////////////////////////////////////////////////////////////////
 // Implement the general interface. Here we use SAME mass on all slices
 /////////////////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/implementation/ImprovedStaggeredFermionImplementation.h

@@ -334,7 +334,6 @@ void ImprovedStaggeredFermion<Impl>::DhopDerivEO(GaugeField &mat, const FermionF
 template <class Impl>
 void ImprovedStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=2;
   conformable(in.Grid(), _grid);  // verifies full grid
   conformable(in.Grid(), out.Grid());
 
@@ -346,7 +345,6 @@ void ImprovedStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &
 template <class Impl>
 void ImprovedStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=1;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -359,7 +357,6 @@ void ImprovedStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField
 template <class Impl>
 void ImprovedStaggeredFermion<Impl>::DhopEO(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=1;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -418,47 +415,33 @@ void ImprovedStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st
   Compressor compressor; 
   int len =  U.Grid()->oSites();
 
-  DhopTotalTime   -= usecond();
-
-  DhopFaceTime    -= usecond();
   st.Prepare();
   st.HaloGather(in,compressor);
-  DhopFaceTime    += usecond();
 
-  DhopCommTime -=usecond();
   std::vector<std::vector<CommsRequest_t> > requests;
   st.CommunicateBegin(requests);
 
-  DhopFaceTime-=usecond();
   st.CommsMergeSHM(compressor);
-  DhopFaceTime+= usecond();
 
   //////////////////////////////////////////////////////////////////////////////////////////////////////
   // Removed explicit thread comms
   //////////////////////////////////////////////////////////////////////////////////////////////////////
-  DhopComputeTime    -= usecond();
   {
     int interior=1;
     int exterior=0;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime    += usecond();
 
   st.CommunicateComplete(requests);
-  DhopCommTime +=usecond();
 
   // First to enter, last to leave timing
-  DhopFaceTime    -= usecond();
   st.CommsMerge(compressor);
-  DhopFaceTime    -= usecond();
 
-  DhopComputeTime2    -= usecond();
   {
     int interior=0;
     int exterior=1;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime2    += usecond();
 }
 
 
@@ -471,78 +454,16 @@ void ImprovedStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, Le
 {
   assert((dag == DaggerNo) || (dag == DaggerYes));
 
-  DhopTotalTime   -= usecond();
-
-  DhopCommTime    -= usecond();
   Compressor compressor;
   st.HaloExchange(in, compressor);
-  DhopCommTime    += usecond();
 
-  DhopComputeTime -= usecond();
   {
     int interior=1;
     int exterior=1;
     Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
   }
-  DhopComputeTime += usecond();
-  DhopTotalTime   += usecond();
 };
 
-  ////////////////////////////////////////////////////////////////
-  // Reporting
-  ////////////////////////////////////////////////////////////////
-template<class Impl>
-void ImprovedStaggeredFermion<Impl>::Report(void) 
-{
-  Coordinate latt = _grid->GlobalDimensions();
-  RealD volume = 1;  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-  RealD NP = _grid->_Nprocessors;
-  RealD NN = _grid->NodeCount();
-
-  std::cout << GridLogMessage << "#### Dhop calls report " << std::endl;
-
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion Number of DhopEO Calls   : " 
-	    << DhopCalls   << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion TotalTime   /Calls       : " 
-	    << DhopTotalTime   / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion CommTime    /Calls       : " 
-	    << DhopCommTime    / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion ComputeTime/Calls        : " 
-	    << DhopComputeTime / DhopCalls << " us" << std::endl;
-
-  // Average the compute time
-  _grid->GlobalSum(DhopComputeTime);
-  DhopComputeTime/=NP;
-
-  RealD mflops = 1154*volume*DhopCalls/DhopComputeTime/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NN << std::endl;
-  
-  RealD Fullmflops = 1154*volume*DhopCalls/(DhopTotalTime)/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank (full): " << Fullmflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NN << std::endl;
-
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion Stencil"    <<std::endl;  Stencil.Report();
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion StencilEven"<<std::endl;  StencilEven.Report();
-  std::cout << GridLogMessage << "ImprovedStaggeredFermion StencilOdd" <<std::endl;  StencilOdd.Report();
-}
-template<class Impl>
-void ImprovedStaggeredFermion<Impl>::ZeroCounters(void) 
-{
-  DhopCalls       = 0;
-  DhopTotalTime   = 0;
-  DhopCommTime    = 0;
-  DhopComputeTime = 0;
-  DhopFaceTime    = 0;
-
-  Stencil.ZeroCounters();
-  StencilEven.ZeroCounters();
-  StencilOdd.ZeroCounters();
-}
-
-
 //////////////////////////////////////////////////////// 
 // Conserved current - not yet implemented.
 ////////////////////////////////////////////////////////

Grid/qcd/action/fermion/implementation/MobiusEOFAFermionCache.h

@@ -55,9 +55,6 @@ void MobiusEOFAFermion<Impl>::M5D(const FermionField &psi_i, const FermionField
   auto plower = &lower[0];
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss = sss*Ls;
@@ -73,7 +70,6 @@ void MobiusEOFAFermion<Impl>::M5D(const FermionField &psi_i, const FermionField
     }
   });
 
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -99,9 +95,6 @@ void MobiusEOFAFermion<Impl>::M5D_shift(const FermionField &psi_i, const Fermion
   auto pshift_coeffs = &shift_coeffs[0];
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss = sss*Ls;
@@ -122,7 +115,6 @@ void MobiusEOFAFermion<Impl>::M5D_shift(const FermionField &psi_i, const Fermion
     }
   });
 
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -143,9 +135,6 @@ void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField &psi_i, const FermionFie
   auto plower = &lower[0];
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(), {
     uint64_t ss = sss*Ls;
@@ -161,8 +150,6 @@ void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField &psi_i, const FermionFie
       coalescedWrite(chi[ss+s], pdiag[s]*phi(ss+s) + pupper[s]*tmp1 + plower[s]*tmp2);
     }
   });
-
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -186,9 +173,6 @@ void MobiusEOFAFermion<Impl>::M5Ddag_shift(const FermionField &psi_i, const Ferm
   auto pshift_coeffs = &shift_coeffs[0];
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
-  this->M5Dcalls++;
-  this->M5Dtime -= usecond();
-
   auto pm = this->pm;
 
   int nloop = grid->oSites()/Ls;
@@ -217,7 +201,6 @@ void MobiusEOFAFermion<Impl>::M5Ddag_shift(const FermionField &psi_i, const Ferm
     }
   });
 
-  this->M5Dtime += usecond();
 }
 
 template<class Impl>
@@ -237,9 +220,6 @@ void MobiusEOFAFermion<Impl>::MooeeInv(const FermionField &psi_i, FermionField &
 
   if(this->shift != 0.0){ MooeeInv_shift(psi_i,chi_i); return; }
 
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -277,7 +257,6 @@ void MobiusEOFAFermion<Impl>::MooeeInv(const FermionField &psi_i, FermionField &
     }
   });
    
-  this->MooeeInvTime += usecond();
 }
 
 template<class Impl>
@@ -297,8 +276,6 @@ void MobiusEOFAFermion<Impl>::MooeeInv_shift(const FermionField &psi_i, FermionF
   auto pueem= & this->ueem[0];
   auto pMooeeInv_shift_lc   = &MooeeInv_shift_lc[0];
   auto pMooeeInv_shift_norm = &MooeeInv_shift_norm[0];
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
 
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -343,7 +320,6 @@ void MobiusEOFAFermion<Impl>::MooeeInv_shift(const FermionField &psi_i, FermionF
       }
   });
 
-  this->MooeeInvTime += usecond();
 }
 
 template<class Impl>
@@ -363,9 +339,6 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag(const FermionField &psi_i, FermionFiel
   auto pleem= & this->leem[0];
   auto pueem= & this->ueem[0];
 
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
     uint64_t ss=sss*Ls;
@@ -402,7 +375,6 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag(const FermionField &psi_i, FermionFiel
       coalescedWrite(chi[ss+s],res);
     }
   });
-  this->MooeeInvTime += usecond();
 }
 
 template<class Impl>
@@ -423,9 +395,6 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag_shift(const FermionField &psi_i, Fermi
   auto pMooeeInvDag_shift_lc   = &MooeeInvDag_shift_lc[0];
   auto pMooeeInvDag_shift_norm = &MooeeInvDag_shift_norm[0];
 
-  this->MooeeInvCalls++;
-  this->MooeeInvTime -= usecond();
-
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
       uint64_t ss=sss*Ls;
@@ -469,7 +438,6 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag_shift(const FermionField &psi_i, Fermi
       }
   });
 
-  this->MooeeInvTime += usecond();
 }
 
 NAMESPACE_END(Grid);

Grid/qcd/action/fermion/implementation/NaiveStaggeredFermionImplementation.h

@@ -263,7 +263,6 @@ void NaiveStaggeredFermion<Impl>::DhopDerivEO(GaugeField &mat, const FermionFiel
 template <class Impl>
 void NaiveStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=2;
   conformable(in.Grid(), _grid);  // verifies full grid
   conformable(in.Grid(), out.Grid());
 
@@ -275,7 +274,6 @@ void NaiveStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &out
 template <class Impl>
 void NaiveStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=1;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -288,7 +286,6 @@ void NaiveStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField &o
 template <class Impl>
 void NaiveStaggeredFermion<Impl>::DhopEO(const FermionField &in, FermionField &out, int dag) 
 {
-  DhopCalls+=1;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -345,47 +342,33 @@ void NaiveStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, L
   Compressor compressor; 
   int len =  U.Grid()->oSites();
 
-  DhopTotalTime   -= usecond();
-
-  DhopFaceTime    -= usecond();
   st.Prepare();
   st.HaloGather(in,compressor);
-  DhopFaceTime    += usecond();
 
-  DhopCommTime -=usecond();
   std::vector<std::vector<CommsRequest_t> > requests;
   st.CommunicateBegin(requests);
 
-  DhopFaceTime-=usecond();
   st.CommsMergeSHM(compressor);
-  DhopFaceTime+= usecond();
 
   //////////////////////////////////////////////////////////////////////////////////////////////////////
   // Removed explicit thread comms
   //////////////////////////////////////////////////////////////////////////////////////////////////////
-  DhopComputeTime    -= usecond();
   {
     int interior=1;
     int exterior=0;
     Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
   }
-  DhopComputeTime    += usecond();
 
   st.CommunicateComplete(requests);
-  DhopCommTime +=usecond();
 
   // First to enter, last to leave timing
-  DhopFaceTime    -= usecond();
   st.CommsMerge(compressor);
-  DhopFaceTime    -= usecond();
 
-  DhopComputeTime2    -= usecond();
   {
     int interior=0;
     int exterior=1;
     Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
   }
-  DhopComputeTime2    += usecond();
 }
 
 template <class Impl>
@@ -396,78 +379,16 @@ void NaiveStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, Lebes
 {
   assert((dag == DaggerNo) || (dag == DaggerYes));
 
-  DhopTotalTime   -= usecond();
-
-  DhopCommTime    -= usecond();
   Compressor compressor;
   st.HaloExchange(in, compressor);
-  DhopCommTime    += usecond();
 
-  DhopComputeTime -= usecond();
   {
     int interior=1;
     int exterior=1;
     Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
   }
-  DhopComputeTime += usecond();
-  DhopTotalTime   += usecond();
 };
 
-  ////////////////////////////////////////////////////////////////
-  // Reporting
-  ////////////////////////////////////////////////////////////////
-template<class Impl>
-void NaiveStaggeredFermion<Impl>::Report(void) 
-{
-  Coordinate latt = _grid->GlobalDimensions();
-  RealD volume = 1;  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-  RealD NP = _grid->_Nprocessors;
-  RealD NN = _grid->NodeCount();
-
-  std::cout << GridLogMessage << "#### Dhop calls report " << std::endl;
-
-  std::cout << GridLogMessage << "NaiveStaggeredFermion Number of DhopEO Calls   : " 
-	    << DhopCalls   << std::endl;
-  std::cout << GridLogMessage << "NaiveStaggeredFermion TotalTime   /Calls       : " 
-	    << DhopTotalTime   / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "NaiveStaggeredFermion CommTime    /Calls       : " 
-	    << DhopCommTime    / DhopCalls << " us" << std::endl;
-  std::cout << GridLogMessage << "NaiveStaggeredFermion ComputeTime/Calls        : " 
-	    << DhopComputeTime / DhopCalls << " us" << std::endl;
-
-  // Average the compute time
-  _grid->GlobalSum(DhopComputeTime);
-  DhopComputeTime/=NP;
-
-  RealD mflops = 1154*volume*DhopCalls/DhopComputeTime/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NN << std::endl;
-  
-  RealD Fullmflops = 1154*volume*DhopCalls/(DhopTotalTime)/2; // 2 for red black counting
-  std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per rank (full): " << Fullmflops/NP << std::endl;
-  std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NN << std::endl;
-
-  std::cout << GridLogMessage << "NaiveStaggeredFermion Stencil"    <<std::endl;  Stencil.Report();
-  std::cout << GridLogMessage << "NaiveStaggeredFermion StencilEven"<<std::endl;  StencilEven.Report();
-  std::cout << GridLogMessage << "NaiveStaggeredFermion StencilOdd" <<std::endl;  StencilOdd.Report();
-}
-template<class Impl>
-void NaiveStaggeredFermion<Impl>::ZeroCounters(void) 
-{
-  DhopCalls       = 0;
-  DhopTotalTime   = 0;
-  DhopCommTime    = 0;
-  DhopComputeTime = 0;
-  DhopFaceTime    = 0;
-
-  Stencil.ZeroCounters();
-  StencilEven.ZeroCounters();
-  StencilOdd.ZeroCounters();
-}
-
-
 //////////////////////////////////////////////////////// 
 // Conserved current - not yet implemented.
 ////////////////////////////////////////////////////////

Grid/qcd/action/fermion/implementation/WilsonFermion5DImplementation.h

@@ -103,8 +103,6 @@ WilsonFermion5D<Impl>::WilsonFermion5D(GaugeField &_Umu,
     Block = block;
   }
 
-  ZeroCounters();
-
   if (Impl::LsVectorised) { 
 
     int nsimd = Simd::Nsimd();
@@ -143,89 +141,6 @@ WilsonFermion5D<Impl>::WilsonFermion5D(GaugeField &_Umu,
    //                       <<" " << StencilEven.surface_list.size()<<std::endl;
 
 }
-     
-template<class Impl>
-void WilsonFermion5D<Impl>::Report(void)
-{
-  RealD NP     = _FourDimGrid->_Nprocessors;
-  RealD NN     = _FourDimGrid->NodeCount();
-  RealD volume = Ls;  
-  Coordinate latt = _FourDimGrid->GlobalDimensions();
-  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-
-  if ( DhopCalls > 0 ) {
-    std::cout << GridLogMessage << "#### Dhop calls report " << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D Number of DhopEO Calls   : " << DhopCalls   << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D TotalTime   /Calls        : " << DhopTotalTime   / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D CommTime    /Calls        : " << DhopCommTime    / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D FaceTime    /Calls        : " << DhopFaceTime    / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D ComputeTime1/Calls        : " << DhopComputeTime / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D ComputeTime2/Calls        : " << DhopComputeTime2/ DhopCalls << " us" << std::endl;
-
-    // Average the compute time
-    _FourDimGrid->GlobalSum(DhopComputeTime);
-    DhopComputeTime/=NP;
-    RealD mflops = 1344*volume*DhopCalls/DhopComputeTime/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NN << std::endl;
-
-    RealD Fullmflops = 1344*volume*DhopCalls/(DhopTotalTime)/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank (full): " << Fullmflops/NP << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NN << std::endl;
-
-   }
-
-  if ( DerivCalls > 0 ) {
-    std::cout << GridLogMessage << "#### Deriv calls report "<< std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D Number of Deriv Calls    : " <<DerivCalls <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D CommTime/Calls           : " <<DerivCommTime/DerivCalls<<" us" <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D ComputeTime/Calls        : " <<DerivComputeTime/DerivCalls<<" us" <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion5D Dhop ComputeTime/Calls   : " <<DerivDhopComputeTime/DerivCalls<<" us" <<std::endl;
-    
-    RealD mflops = 144*volume*DerivCalls/DerivDhopComputeTime;
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NP << std::endl;
-
-    RealD Fullmflops = 144*volume*DerivCalls/(DerivDhopComputeTime+DerivCommTime)/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NP << std::endl;  }
-
-  if (DerivCalls > 0 || DhopCalls > 0){
-    std::cout << GridLogMessage << "WilsonFermion5D Stencil"    <<std::endl;  Stencil.Report();
-    std::cout << GridLogMessage << "WilsonFermion5D StencilEven"<<std::endl;  StencilEven.Report();
-    std::cout << GridLogMessage << "WilsonFermion5D StencilOdd" <<std::endl;  StencilOdd.Report();
-  }
-  if ( DhopCalls > 0){
-    std::cout << GridLogMessage << "WilsonFermion5D Stencil     Reporti()"    <<std::endl;  Stencil.Reporti(DhopCalls);
-    std::cout << GridLogMessage << "WilsonFermion5D StencilEven Reporti()"<<std::endl;  StencilEven.Reporti(DhopCalls);
-    std::cout << GridLogMessage << "WilsonFermion5D StencilOdd  Reporti()" <<std::endl;  StencilOdd.Reporti(DhopCalls);
-  }
-}
-
-template<class Impl>
-void WilsonFermion5D<Impl>::ZeroCounters(void) {
-  DhopCalls       = 0;
-  DhopCommTime    = 0;
-  DhopComputeTime = 0;
-  DhopComputeTime2= 0;
-  DhopFaceTime    = 0;
-  DhopTotalTime   = 0;
-
-  DerivCalls       = 0;
-  DerivCommTime    = 0;
-  DerivComputeTime = 0;
-  DerivDhopComputeTime = 0;
-
-  Stencil.ZeroCounters();
-  StencilEven.ZeroCounters();
-  StencilOdd.ZeroCounters();
-  Stencil.ZeroCountersi();
-  StencilEven.ZeroCountersi();
-  StencilOdd.ZeroCountersi();
-}
-
 
 template<class Impl>
 void WilsonFermion5D<Impl>::ImportGauge(const GaugeField &_Umu)
@@ -233,10 +148,10 @@ void WilsonFermion5D<Impl>::ImportGauge(const GaugeField &_Umu)
   GaugeField HUmu(_Umu.Grid());
   HUmu = _Umu*(-0.5);
   if ( Dirichlet ) {
-    std::cout << GridLogMessage << " Dirichlet BCs 5d " <<Block<<std::endl;
+    std::cout << GridLogDslash << " Dirichlet BCs 5d " <<Block<<std::endl;
     Coordinate GaugeBlock(Nd);
     for(int d=0;d<Nd;d++) GaugeBlock[d] = Block[d+1];
-    std::cout << GridLogMessage << " Dirichlet BCs 4d " <<GaugeBlock<<std::endl;
+    std::cout << GridLogDslash << " Dirichlet BCs 4d " <<GaugeBlock<<std::endl;
     DirichletFilter<GaugeField> Filter(GaugeBlock);
     Filter.applyFilter(HUmu);
   }
@@ -281,7 +196,6 @@ void WilsonFermion5D<Impl>::DerivInternal(StencilImpl & st,
 					  const FermionField &B,
 					  int dag)
 {
-  DerivCalls++;
   assert((dag==DaggerNo) ||(dag==DaggerYes));
 
   conformable(st.Grid(),A.Grid());
@@ -292,15 +206,12 @@ void WilsonFermion5D<Impl>::DerivInternal(StencilImpl & st,
   FermionField Btilde(B.Grid());
   FermionField Atilde(B.Grid());
 
-  DerivCommTime-=usecond();
   st.HaloExchange(B,compressor);
-  DerivCommTime+=usecond();
 
   Atilde=A;
   int LLs = B.Grid()->_rdimensions[0];
 
 
-  DerivComputeTime-=usecond();
   for (int mu = 0; mu < Nd; mu++) {
     ////////////////////////////////////////////////////////////////////////
     // Flip gamma if dag
@@ -312,8 +223,6 @@ void WilsonFermion5D<Impl>::DerivInternal(StencilImpl & st,
     // Call the single hop
     ////////////////////////
 
-    DerivDhopComputeTime -= usecond();
-
     int Usites = U.Grid()->oSites();
 
     Kernels::DhopDirKernel(st, U, st.CommBuf(), Ls, Usites, B, Btilde, mu,gamma);
@@ -321,10 +230,8 @@ void WilsonFermion5D<Impl>::DerivInternal(StencilImpl & st,
     ////////////////////////////
     // spin trace outer product
     ////////////////////////////
-    DerivDhopComputeTime += usecond();
     Impl::InsertForce5D(mat, Btilde, Atilde, mu);
   }
-  DerivComputeTime += usecond();
 }
 
 template<class Impl>
@@ -382,12 +289,10 @@ void WilsonFermion5D<Impl>::DhopInternal(StencilImpl & st, LebesgueOrder &lo,
                                          DoubledGaugeField & U,
                                          const FermionField &in, FermionField &out,int dag)
 {
-  DhopTotalTime-=usecond();
   if ( WilsonKernelsStatic::Comms == WilsonKernelsStatic::CommsAndCompute )
     DhopInternalOverlappedComms(st,lo,U,in,out,dag);
   else 
     DhopInternalSerialComms(st,lo,U,in,out,dag);
-  DhopTotalTime+=usecond();
 }
 
 
@@ -396,6 +301,7 @@ void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, Lebesg
 							DoubledGaugeField & U,
 							const FermionField &in, FermionField &out,int dag)
 {
+  GRID_TRACE("DhopInternalOverlappedComms");
   Compressor compressor(dag);
 
   int LLs = in.Grid()->_rdimensions[0];
@@ -404,53 +310,58 @@ void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, Lebesg
   /////////////////////////////
   // Start comms  // Gather intranode and extra node differentiated??
   /////////////////////////////
-  DhopFaceTime-=usecond();
-  st.HaloExchangeOptGather(in,compressor);
-  DhopFaceTime+=usecond();
-
-  DhopCommTime -=usecond();
+  {
+    GRID_TRACE("Gather");
+    st.HaloExchangeOptGather(in,compressor);
+    accelerator_barrier();
+  }
+  
   std::vector<std::vector<CommsRequest_t> > requests;
+  auto id=traceStart("Communicate overlapped");
   st.CommunicateBegin(requests);
 
   /////////////////////////////
   // Overlap with comms
   /////////////////////////////
-  DhopFaceTime-=usecond();
-  st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms
-  DhopFaceTime+=usecond();
+  {
+    GRID_TRACE("MergeSHM");
+    st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms
+  }
       
   /////////////////////////////
   // do the compute interior
   /////////////////////////////
   int Opt = WilsonKernelsStatic::Opt; // Why pass this. Kernels should know
-  DhopComputeTime-=usecond();
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDagInterior");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,1,0);
   } else {
+    GRID_TRACE("DhopInterior");
     Kernels::DhopKernel   (Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,1,0);
   }
-  DhopComputeTime+=usecond();
 
   /////////////////////////////
   // Complete comms
   /////////////////////////////
   st.CommunicateComplete(requests);
-  DhopCommTime   +=usecond();
+  traceStop(id);
 
   /////////////////////////////
   // do the compute exterior
   /////////////////////////////
-  DhopFaceTime-=usecond();
-  st.CommsMerge(compressor);
-  DhopFaceTime+=usecond();
+  {
+    GRID_TRACE("Merge");
+    st.CommsMerge(compressor);
+  }
+  
 
-  DhopComputeTime2-=usecond();
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDagExterior");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,0,1);
   } else {
+    GRID_TRACE("DhopExterior");
     Kernels::DhopKernel   (Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,0,1);
   }
-  DhopComputeTime2+=usecond();
 }
 
 
@@ -460,29 +371,30 @@ void WilsonFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, LebesgueOr
 						    const FermionField &in, 
 						    FermionField &out,int dag)
 {
+  GRID_TRACE("DhopInternalSerialComms");
   Compressor compressor(dag);
 
   int LLs = in.Grid()->_rdimensions[0];
+
+  {
+    GRID_TRACE("HaloExchange");
+    st.HaloExchangeOpt(in,compressor);
+  }
   
-  DhopCommTime-=usecond();
-  st.HaloExchangeOpt(in,compressor);
-  DhopCommTime+=usecond();
-  
-  DhopComputeTime-=usecond();
   int Opt = WilsonKernelsStatic::Opt;
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDag");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out);
   } else {
+    GRID_TRACE("Dhop");
     Kernels::DhopKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out);
   }
-  DhopComputeTime+=usecond();
 }
 
 
 template<class Impl>
 void WilsonFermion5D<Impl>::DhopOE(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls++;
   conformable(in.Grid(),FermionRedBlackGrid());    // verifies half grid
   conformable(in.Grid(),out.Grid()); // drops the cb check
 
@@ -494,7 +406,6 @@ void WilsonFermion5D<Impl>::DhopOE(const FermionField &in, FermionField &out,int
 template<class Impl>
 void WilsonFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls++;
   conformable(in.Grid(),FermionRedBlackGrid());    // verifies half grid
   conformable(in.Grid(),out.Grid()); // drops the cb check
 
@@ -506,7 +417,6 @@ void WilsonFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int
 template<class Impl>
 void WilsonFermion5D<Impl>::Dhop(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls+=2;
   conformable(in.Grid(),FermionGrid()); // verifies full grid
   conformable(in.Grid(),out.Grid());
 
@@ -561,12 +471,17 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt_5d(FermionField &out,const
   LatComplex    sk(_grid);  sk = Zero();
   LatComplex    sk2(_grid); sk2= Zero();
   LatComplex    W(_grid); W= Zero();
-  LatComplex    a(_grid); a= Zero();
   LatComplex    one  (_grid); one = ScalComplex(1.0,0.0);
   LatComplex 	cosha(_grid);
   LatComplex 	kmu(_grid);
   LatComplex 	Wea(_grid);
   LatComplex 	Wema(_grid);
+  LatComplex 	ea(_grid);
+  LatComplex 	ema(_grid);
+  LatComplex 	eaLs(_grid);
+  LatComplex 	emaLs(_grid);
+  LatComplex 	ea2Ls(_grid);
+  LatComplex 	ema2Ls(_grid);
   LatComplex 	sinha(_grid);
   LatComplex 	sinhaLs(_grid);
   LatComplex 	coshaLs(_grid);
@@ -601,39 +516,29 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt_5d(FermionField &out,const
   ////////////////////////////////////////////
   cosha = (one + W*W + sk) / (abs(W)*2.0);
 
-  // FIXME Need a Lattice acosh
-
-  {
-    autoView(cosha_v,cosha,CpuRead);
-    autoView(a_v,a,CpuWrite);
-    for(int idx=0;idx<_grid->lSites();idx++){
-      Coordinate lcoor(Nd);
-      Tcomplex cc;
-      //    RealD sgn;
-      _grid->LocalIndexToLocalCoor(idx,lcoor);
-      peekLocalSite(cc,cosha_v,lcoor);
-      assert((double)real(cc)>=1.0);
-      assert(fabs((double)imag(cc))<=1.0e-15);
-      cc = ScalComplex(::acosh(real(cc)),0.0);
-      pokeLocalSite(cc,a_v,lcoor);
-    }
-  }
-
-  Wea = ( exp( a) * abs(W)  );
-  Wema= ( exp(-a) * abs(W)  );
-  sinha = 0.5*(exp( a) - exp(-a));
-  sinhaLs = 0.5*(exp( a*Ls) - exp(-a*Ls));
-  coshaLs = 0.5*(exp( a*Ls) + exp(-a*Ls));
+  ea = (cosha + sqrt(cosha*cosha-one));
+  ema= (cosha - sqrt(cosha*cosha-one));
+  eaLs = pow(ea,Ls);
+  emaLs= pow(ema,Ls);
+  ea2Ls = pow(ea,2.0*Ls);
+  ema2Ls= pow(ema,2.0*Ls);
+  Wea= abs(W) * ea;
+  Wema= abs(W) * ema;
+  //  a=log(ea);
+  
+  sinha = 0.5*(ea - ema);
+  sinhaLs = 0.5*(eaLs-emaLs);
+  coshaLs = 0.5*(eaLs+emaLs);
 
   A = one / (abs(W) * sinha * 2.0) * one / (sinhaLs * 2.0);
-  F = exp( a*Ls) * (one - Wea + (Wema - one) * mass*mass);
-  F = F + exp(-a*Ls) * (Wema - one + (one - Wea) * mass*mass);
+  F = eaLs * (one - Wea + (Wema - one) * mass*mass);
+  F = F + emaLs * (Wema - one + (one - Wea) * mass*mass);
   F = F - abs(W) * sinha * 4.0 * mass;
 
-  Bpp =  (A/F) * (exp(-a*Ls*2.0) - one) * (one - Wema) * (one - mass*mass * one);
-  Bmm =  (A/F) * (one - exp(a*Ls*2.0)) * (one - Wea) * (one - mass*mass * one);
-  App =  (A/F) * (exp(-a*Ls*2.0) - one) * exp(-a) * (exp(-a) - abs(W)) * (one - mass*mass * one);
-  Amm =  (A/F) * (one - exp(a*Ls*2.0)) * exp(a) * (exp(a) - abs(W)) * (one - mass*mass * one);
+  Bpp =  (A/F) * (ema2Ls - one) * (one - Wema) * (one - mass*mass * one);
+  Bmm =  (A/F) * (one - ea2Ls)  * (one - Wea) * (one - mass*mass * one);
+  App =  (A/F) * (ema2Ls - one) * ema * (ema - abs(W)) * (one - mass*mass * one);
+  Amm =  (A/F) * (one - ea2Ls)  * ea  * (ea  - abs(W)) * (one - mass*mass * one);
   ABpm = (A/F) * abs(W) * sinha * 2.0  * (one + mass * coshaLs * 2.0 + mass*mass * one);
 
   //P+ source, P- source
@@ -656,29 +561,29 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt_5d(FermionField &out,const
       buf1_4d = Zero();
       ExtractSlice(buf1_4d, PRsource, (tt-1), 0);
       //G(s,t)
-      bufR_4d = bufR_4d + A * exp(a*Ls) * exp(-a*f) * signW * buf1_4d + A * exp(-a*Ls) * exp(a*f) * signW * buf1_4d;
+      bufR_4d = bufR_4d + A * eaLs * pow(ema,f) * signW * buf1_4d + A * emaLs * pow(ea,f) * signW * buf1_4d;
       //A++*exp(a(s+t))
-      bufR_4d = bufR_4d + App * exp(a*ss) * exp(a*tt) * signW * buf1_4d ;
+      bufR_4d = bufR_4d + App * pow(ea,ss) * pow(ea,tt) * signW * buf1_4d ;
       //A+-*exp(a(s-t))
-      bufR_4d = bufR_4d + ABpm * exp(a*ss) * exp(-a*tt) * signW * buf1_4d ;
+      bufR_4d = bufR_4d + ABpm * pow(ea,ss) * pow(ema,tt) * signW * buf1_4d ;
       //A-+*exp(a(-s+t))
-      bufR_4d = bufR_4d + ABpm * exp(-a*ss) * exp(a*tt) * signW * buf1_4d ;
+      bufR_4d = bufR_4d + ABpm * pow(ema,ss) * pow(ea,tt) * signW * buf1_4d ;
       //A--*exp(a(-s-t))
-      bufR_4d = bufR_4d + Amm * exp(-a*ss) * exp(-a*tt) * signW * buf1_4d ;
+      bufR_4d = bufR_4d + Amm * pow(ema,ss) * pow(ema,tt) * signW * buf1_4d ;
 
       //GL
       buf2_4d = Zero();
       ExtractSlice(buf2_4d, PLsource, (tt-1), 0);
       //G(s,t)
-      bufL_4d = bufL_4d + A * exp(a*Ls) * exp(-a*f) * signW * buf2_4d + A * exp(-a*Ls) * exp(a*f) * signW * buf2_4d;
+      bufL_4d = bufL_4d + A * eaLs * pow(ema,f) * signW * buf2_4d + A * emaLs * pow(ea,f) * signW * buf2_4d;
       //B++*exp(a(s+t))
-      bufL_4d = bufL_4d + Bpp * exp(a*ss) * exp(a*tt) * signW * buf2_4d ;
+      bufL_4d = bufL_4d + Bpp * pow(ea,ss) * pow(ea,tt) * signW * buf2_4d ;
       //B+-*exp(a(s-t))
-      bufL_4d = bufL_4d + ABpm * exp(a*ss) * exp(-a*tt) * signW * buf2_4d ;
+      bufL_4d = bufL_4d + ABpm * pow(ea,ss) * pow(ema,tt) * signW * buf2_4d ;
       //B-+*exp(a(-s+t))
-      bufL_4d = bufL_4d + ABpm * exp(-a*ss) * exp(a*tt) * signW * buf2_4d ;
+      bufL_4d = bufL_4d + ABpm * pow(ema,ss) * pow(ea,tt) * signW * buf2_4d ;
       //B--*exp(a(-s-t))
-      bufL_4d = bufL_4d + Bmm * exp(-a*ss) * exp(-a*tt) * signW * buf2_4d ;
+      bufL_4d = bufL_4d + Bmm * pow(ema,ss) * pow(ema,tt) * signW * buf2_4d ;
     }
     InsertSlice(bufR_4d, GR, (ss-1), 0);
     InsertSlice(bufL_4d, GL, (ss-1), 0);
@@ -797,28 +702,12 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt(FermionField &out,const Fe
   W = one - M5 + sk2;
 
   ////////////////////////////////////////////
-  // Cosh alpha -> alpha
+  // Cosh alpha -> exp(+/- alpha)
   ////////////////////////////////////////////
   cosha =  (one + W*W + sk) / (abs(W)*2.0);
 
-  // FIXME Need a Lattice acosh
-  {
-  autoView(cosha_v,cosha,CpuRead);
-  autoView(a_v,a,CpuWrite);
-  for(int idx=0;idx<_grid->lSites();idx++){
-    Coordinate lcoor(Nd);
-    Tcomplex cc;
-    //    RealD sgn;
-    _grid->LocalIndexToLocalCoor(idx,lcoor);
-    peekLocalSite(cc,cosha_v,lcoor);
-    assert((double)real(cc)>=1.0);
-    assert(fabs((double)imag(cc))<=1.0e-15);
-    cc = ScalComplex(::acosh(real(cc)),0.0);
-    pokeLocalSite(cc,a_v,lcoor);
-  }}
-  
-  Wea = ( exp( a) * abs(W)  );
-  Wema= ( exp(-a) * abs(W)  );
+  Wea = abs(W)*(cosha + sqrt(cosha*cosha-one));
+  Wema= abs(W)*(cosha - sqrt(cosha*cosha-one));
   
   num   = num + ( one - Wema ) * mass * in;
   denom= ( Wea - one ) + mass*mass * (one - Wema); 

Grid/qcd/action/fermion/implementation/WilsonFermionImplementation.h

@@ -76,91 +76,6 @@ WilsonFermion<Impl>::WilsonFermion(GaugeField &_Umu, GridCartesian &Fgrid,
   StencilOdd.BuildSurfaceList(1,vol4);
 }
 
-template<class Impl>
-void WilsonFermion<Impl>::Report(void)
-{
-  RealD NP = _grid->_Nprocessors;
-  RealD NN = _grid->NodeCount();
-  RealD volume = 1;
-  Coordinate latt = _grid->GlobalDimensions();
-  for(int mu=0;mu<Nd;mu++) volume=volume*latt[mu];
-
-  if ( DhopCalls > 0 ) {
-    std::cout << GridLogMessage << "#### Dhop calls report " << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion Number of DhopEO Calls   : " << DhopCalls   << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion TotalTime   /Calls        : " << DhopTotalTime   / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion CommTime    /Calls        : " << DhopCommTime    / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion FaceTime    /Calls        : " << DhopFaceTime    / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion ComputeTime1/Calls        : " << DhopComputeTime / DhopCalls << " us" << std::endl;
-    std::cout << GridLogMessage << "WilsonFermion ComputeTime2/Calls        : " << DhopComputeTime2/ DhopCalls << " us" << std::endl;
-
-    // Average the compute time
-    _grid->GlobalSum(DhopComputeTime);
-    DhopComputeTime/=NP;
-    RealD mflops = 1320*volume*DhopCalls/DhopComputeTime/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call                : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank       : " << mflops/NP << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node       : " << mflops/NN << std::endl;
-
-    RealD Fullmflops = 1320*volume*DhopCalls/(DhopTotalTime)/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call (full)         : " << Fullmflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per rank (full): " << Fullmflops/NP << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node (full): " << Fullmflops/NN << std::endl;
-
-   }
-
-  if ( DerivCalls > 0 ) {
-    std::cout << GridLogMessage << "#### Deriv calls report "<< std::endl;
-    std::cout << GridLogMessage << "WilsonFermion Number of Deriv Calls    : " <<DerivCalls <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion CommTime/Calls           : " <<DerivCommTime/DerivCalls<<" us" <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion ComputeTime/Calls        : " <<DerivComputeTime/DerivCalls<<" us" <<std::endl;
-    std::cout << GridLogMessage << "WilsonFermion Dhop ComputeTime/Calls   : " <<DerivDhopComputeTime/DerivCalls<<" us" <<std::endl;
-
-    // how to count flops here?
-    RealD mflops = 144*volume*DerivCalls/DerivDhopComputeTime;
-    std::cout << GridLogMessage << "Average mflops/s per call               ? : " << mflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node      ? : " << mflops/NP << std::endl;
-
-    // how to count flops here?
-    RealD Fullmflops = 144*volume*DerivCalls/(DerivDhopComputeTime+DerivCommTime)/2; // 2 for red black counting
-    std::cout << GridLogMessage << "Average mflops/s per call (full)        ? : " << Fullmflops << std::endl;
-    std::cout << GridLogMessage << "Average mflops/s per call per node (full) ? : " << Fullmflops/NP << std::endl;  }
-
-  if (DerivCalls > 0 || DhopCalls > 0){
-    std::cout << GridLogMessage << "WilsonFermion Stencil"    <<std::endl;  Stencil.Report();
-    std::cout << GridLogMessage << "WilsonFermion StencilEven"<<std::endl;  StencilEven.Report();
-    std::cout << GridLogMessage << "WilsonFermion StencilOdd" <<std::endl;  StencilOdd.Report();
-  }
-  if ( DhopCalls > 0){
-    std::cout << GridLogMessage << "WilsonFermion Stencil     Reporti()"    <<std::endl;  Stencil.Reporti(DhopCalls);
-    std::cout << GridLogMessage << "WilsonFermion StencilEven Reporti()"<<std::endl;  StencilEven.Reporti(DhopCalls);
-    std::cout << GridLogMessage << "WilsonFermion StencilOdd  Reporti()" <<std::endl;  StencilOdd.Reporti(DhopCalls);
-  }
-}
-
-template<class Impl>
-void WilsonFermion<Impl>::ZeroCounters(void) {
-  DhopCalls       = 0; // ok
-  DhopCommTime    = 0;
-  DhopComputeTime = 0;
-  DhopComputeTime2= 0;
-  DhopFaceTime    = 0;
-  DhopTotalTime   = 0;
-
-  DerivCalls       = 0; // ok
-  DerivCommTime    = 0;
-  DerivComputeTime = 0;
-  DerivDhopComputeTime = 0;
-
-  Stencil.ZeroCounters();
-  StencilEven.ZeroCounters();
-  StencilOdd.ZeroCounters();
-  Stencil.ZeroCountersi();
-  StencilEven.ZeroCountersi();
-  StencilOdd.ZeroCountersi();
-}
-
-
 template <class Impl>
 void WilsonFermion<Impl>::ImportGauge(const GaugeField &_Umu)
 {
@@ -320,7 +235,6 @@ template <class Impl>
 void WilsonFermion<Impl>::DerivInternal(StencilImpl &st, DoubledGaugeField &U,
                                         GaugeField &mat, const FermionField &A,
                                         const FermionField &B, int dag) {
-  DerivCalls++;
   assert((dag == DaggerNo) || (dag == DaggerYes));
 
   Compressor compressor(dag);
@@ -329,11 +243,8 @@ void WilsonFermion<Impl>::DerivInternal(StencilImpl &st, DoubledGaugeField &U,
   FermionField Atilde(B.Grid());
   Atilde = A;
 
-  DerivCommTime-=usecond();
   st.HaloExchange(B, compressor);
-  DerivCommTime+=usecond();
 
-  DerivComputeTime-=usecond();
   for (int mu = 0; mu < Nd; mu++) {
     ////////////////////////////////////////////////////////////////////////
     // Flip gamma (1+g)<->(1-g) if dag
@@ -341,7 +252,6 @@ void WilsonFermion<Impl>::DerivInternal(StencilImpl &st, DoubledGaugeField &U,
     int gamma = mu;
     if (!dag) gamma += Nd;
 
-    DerivDhopComputeTime -= usecond();
     int Ls=1;
     Kernels::DhopDirKernel(st, U, st.CommBuf(), Ls, B.Grid()->oSites(), B, Btilde, mu, gamma);
 
@@ -349,9 +259,7 @@ void WilsonFermion<Impl>::DerivInternal(StencilImpl &st, DoubledGaugeField &U,
     // spin trace outer product
     //////////////////////////////////////////////////
     Impl::InsertForce4D(mat, Btilde, Atilde, mu);
-    DerivDhopComputeTime += usecond();
   }
-  DerivComputeTime += usecond();
 }
 
 template <class Impl>
@@ -398,7 +306,6 @@ void WilsonFermion<Impl>::DhopDerivEO(GaugeField &mat, const FermionField &U, co
 template <class Impl>
 void WilsonFermion<Impl>::Dhop(const FermionField &in, FermionField &out, int dag)
 {
-  DhopCalls+=2;
   conformable(in.Grid(), _grid);  // verifies full grid
   conformable(in.Grid(), out.Grid());
 
@@ -410,7 +317,6 @@ void WilsonFermion<Impl>::Dhop(const FermionField &in, FermionField &out, int da
 template <class Impl>
 void WilsonFermion<Impl>::DhopOE(const FermionField &in, FermionField &out, int dag)
 {
-  DhopCalls++;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -423,7 +329,6 @@ void WilsonFermion<Impl>::DhopOE(const FermionField &in, FermionField &out, int
 template <class Impl>
 void WilsonFermion<Impl>::DhopEO(const FermionField &in, FermionField &out,int dag)
 {
-  DhopCalls++;
   conformable(in.Grid(), _cbgrid);    // verifies half grid
   conformable(in.Grid(), out.Grid());  // drops the cb check
 
@@ -488,14 +393,12 @@ void WilsonFermion<Impl>::DhopInternal(StencilImpl &st, LebesgueOrder &lo,
                                        const FermionField &in,
                                        FermionField &out, int dag)
 {
-  DhopTotalTime-=usecond();
 #ifdef GRID_OMP
   if ( WilsonKernelsStatic::Comms == WilsonKernelsStatic::CommsAndCompute )
     DhopInternalOverlappedComms(st,lo,U,in,out,dag);
   else
 #endif
     DhopInternalSerial(st,lo,U,in,out,dag);
-  DhopTotalTime+=usecond();
 }
 
 template <class Impl>
@@ -504,6 +407,7 @@ void WilsonFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueO
 						      const FermionField &in,
 						      FermionField &out, int dag)
 {
+  GRID_TRACE("DhopOverlapped");
   assert((dag == DaggerNo) || (dag == DaggerYes));
 
   Compressor compressor(dag);
@@ -514,53 +418,55 @@ void WilsonFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueO
   /////////////////////////////
   std::vector<std::vector<CommsRequest_t> > requests;
   st.Prepare();
-  DhopFaceTime-=usecond();
-  st.HaloGather(in,compressor);
-  DhopFaceTime+=usecond();
+  {
+    GRID_TRACE("Gather");
+    st.HaloGather(in,compressor);
+  }
 
-  DhopCommTime -=usecond();
+  tracePush("Communication");
   st.CommunicateBegin(requests);
 
   /////////////////////////////
   // Overlap with comms
   /////////////////////////////
-  DhopFaceTime-=usecond();
-  st.CommsMergeSHM(compressor);
-  DhopFaceTime+=usecond();
+  {
+    GRID_TRACE("MergeSHM");
+    st.CommsMergeSHM(compressor);
+  }
 
   /////////////////////////////
   // do the compute interior
   /////////////////////////////
   int Opt = WilsonKernelsStatic::Opt;
-  DhopComputeTime-=usecond();
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDagInterior");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out,1,0);
   } else {
+    GRID_TRACE("DhopInterior");
     Kernels::DhopKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out,1,0);
   }
-  DhopComputeTime+=usecond();
 
   /////////////////////////////
   // Complete comms
   /////////////////////////////
   st.CommunicateComplete(requests);
-  DhopCommTime   +=usecond();
-
-  DhopFaceTime-=usecond();
-  st.CommsMerge(compressor);
-  DhopFaceTime+=usecond();
+  tracePop("Communication");
 
+  {
+    GRID_TRACE("Merge");
+    st.CommsMerge(compressor);
+  }
   /////////////////////////////
   // do the compute exterior
   /////////////////////////////
 
-  DhopComputeTime2-=usecond();
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDagExterior");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out,0,1);
   } else {
+    GRID_TRACE("DhopExterior");
     Kernels::DhopKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out,0,1);
   }
-  DhopComputeTime2+=usecond();
 };
 
 
@@ -570,20 +476,22 @@ void WilsonFermion<Impl>::DhopInternalSerial(StencilImpl &st, LebesgueOrder &lo,
                                        const FermionField &in,
                                        FermionField &out, int dag)
 {
+  GRID_TRACE("DhopSerial");
   assert((dag == DaggerNo) || (dag == DaggerYes));
   Compressor compressor(dag);
-  DhopCommTime-=usecond();
-  st.HaloExchange(in, compressor);
-  DhopCommTime+=usecond();
+  {
+    GRID_TRACE("HaloExchange");
+    st.HaloExchange(in, compressor);
+  }
 
-  DhopComputeTime-=usecond();
   int Opt = WilsonKernelsStatic::Opt;
   if (dag == DaggerYes) {
+    GRID_TRACE("DhopDag");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out);
   } else {
+    GRID_TRACE("Dhop");
     Kernels::DhopKernel(Opt,st,U,st.CommBuf(),1,U.oSites(),in,out);
   }
-  DhopComputeTime+=usecond();
 };
 /*Change ends */
 

Grid/qcd/action/fermion/implementation/WilsonKernelsImplementation.h

@@ -72,20 +72,15 @@ accelerator_inline void get_stencil(StencilEntry * mem, StencilEntry &chip)
   if (SE->_is_local) {						\
     int perm= SE->_permute;					\
     auto tmp = coalescedReadPermute(in[SE->_offset],ptype,perm,lane);	\
-    spProj(chi,tmp);						\
-  } else if ( st.same_node[Dir] ) {				\
-    chi = coalescedRead(buf[SE->_offset],lane);			\
-  }								\
-  acceleratorSynchronise();						\
-  if (SE->_is_local || st.same_node[Dir] ) {			\
-    Impl::multLink(Uchi, U[sU], chi, Dir, SE, st);		\
-    Recon(result, Uchi);					\
-  }								\
+    spProj(chi,tmp);							\
+    Impl::multLink(Uchi, U[sU], chi, Dir, SE, st);			\
+    Recon(result, Uchi);						\
+  }									\
   acceleratorSynchronise();
 
 #define GENERIC_STENCIL_LEG_EXT(Dir,spProj,Recon)		\
   SE = st.GetEntry(ptype, Dir, sF);				\
-  if ((!SE->_is_local) && (!st.same_node[Dir]) ) {		\
+  if (!SE->_is_local ) {		\
     auto chi = coalescedRead(buf[SE->_offset],lane);		\
     Impl::multLink(Uchi, U[sU], chi, Dir, SE, st);		\
     Recon(result, Uchi);					\
@@ -416,19 +411,6 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
 #undef LoopBody
 }
 
-#define KERNEL_CALL_TMP(A) \
-  const uint64_t    NN = Nsite*Ls;					\
-  auto U_p = & U_v[0];							\
-  auto in_p = & in_v[0];						\
-  auto out_p = & out_v[0];						\
-  auto st_p = st_v._entries_p;						\
-  auto st_perm = st_v._permute_type;					\
-  accelerator_forNB( ss, NN, Simd::Nsimd(), {				\
-      int sF = ss;							\
-      int sU = ss/Ls;							\
-      WilsonKernels<Impl>::A(st_perm,st_p,U_p,buf,sF,sU,in_p,out_p);	\
-    });									\
-  accelerator_barrier();
 
 #define KERNEL_CALLNB(A)						\
   const uint64_t    NN = Nsite*Ls;					\
@@ -448,8 +430,7 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
       int sF = ptr[ss];							\
       int sU = ss/Ls;							\
       WilsonKernels<Impl>::A(st_v,U_v,buf,sF,sU,in_v,out_v);		\
-    });									\
-  accelerator_barrier();
+    });									
 
 #define ASM_CALL(A)							\
   thread_for( ss, Nsite, {						\
@@ -471,7 +452,7 @@ void WilsonKernels<Impl>::DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField
    if( interior && exterior ) {
      if (Opt == WilsonKernelsStatic::OptGeneric    ) { KERNEL_CALL(GenericDhopSite); return;}
 #ifdef SYCL_HACK     
-     if (Opt == WilsonKernelsStatic::OptHandUnroll ) { KERNEL_CALL_TMP(HandDhopSiteSycl);    return; }
+     if (Opt == WilsonKernelsStatic::OptHandUnroll ) { KERNEL_CALL(HandDhopSiteSycl);    return; }
 #else
      if (Opt == WilsonKernelsStatic::OptHandUnroll ) { KERNEL_CALL(HandDhopSite);    return;}
 #endif     

Grid/qcd/action/filters/DDHMCFilter.h

@@ -91,6 +91,19 @@ struct DDHMCFilter: public MomentumFilterBase<GaugeField>
 	  U_mu = where(mod(coor,B1)==Integer(B1-4),zzz_mu,U_mu); 
 	  PokeIndex<LorentzIndex>(U, U_mu, mu);
 	}
+	if ( Width==4) { 
+	  U    = where(mod(coor,B1)==Integer(B1-4),zzz,U);
+	  U    = where(mod(coor,B1)==Integer(B1-3),zzz,U);
+	  U    = where(mod(coor,B1)==Integer(B1-2),zzz,U);
+	  U    = where(mod(coor,B1)==Integer(B1-1),zzz,U);
+	  U    = where(mod(coor,B1)==Integer(0)   ,zzz,U); 
+	  U    = where(mod(coor,B1)==Integer(1)   ,zzz,U); 
+	  U    = where(mod(coor,B1)==Integer(2)   ,zzz,U); 
+	  U    = where(mod(coor,B1)==Integer(3)   ,zzz,U); 
+	  auto U_mu   = PeekIndex<LorentzIndex>(U,mu);
+	  U_mu = where(mod(coor,B1)==Integer(B1-5),zzz_mu,U_mu); 
+	  PokeIndex<LorentzIndex>(U, U_mu, mu);
+	}
       }
 
     }

Grid/qcd/action/filters/MomentumFilter.h

@@ -38,6 +38,7 @@ NAMESPACE_BEGIN(Grid);
 template<typename MomentaField>
 struct MomentumFilterBase{
   virtual void applyFilter(MomentaField &P) const = 0;
+  virtual ~MomentumFilterBase(){};
 };
 
 //Do nothing
@@ -83,7 +84,6 @@ struct MomentumFilterApplyPhase: public MomentumFilterBase<MomentaField>{
     
   }
 
-
 };
 
 

Grid/qcd/action/pseudofermion/OneFlavourEvenOddRationalRatio.h

@@ -67,6 +67,36 @@ NAMESPACE_BEGIN(Grid);
       virtual std::string action_name(){return "OneFlavourEvenOddRatioRationalPseudoFermionAction";}      
     };
 
+    template<class Impl,class ImplF>
+    class OneFlavourEvenOddRatioRationalMixedPrecPseudoFermionAction : public GeneralEvenOddRatioRationalMixedPrecPseudoFermionAction<Impl,ImplF> {
+    public:
+      typedef OneFlavourRationalParams Params;
+    private:
+      static RationalActionParams transcribe(const Params &in){
+	RationalActionParams out;
+	out.inv_pow = 2;
+	out.lo = in.lo;
+	out.hi = in.hi;
+	out.MaxIter = in.MaxIter;
+	out.action_tolerance = out.md_tolerance = in.tolerance;
+	out.action_degree = out.md_degree = in.degree;
+	out.precision = in.precision;
+	out.BoundsCheckFreq = in.BoundsCheckFreq;
+	return out;
+      }
+
+    public:
+      OneFlavourEvenOddRatioRationalMixedPrecPseudoFermionAction(FermionOperator<Impl>  &_NumOp, 
+								 FermionOperator<Impl>  &_DenOp, 
+								 FermionOperator<ImplF>  &_NumOpF, 
+								 FermionOperator<ImplF>  &_DenOpF, 
+								 const Params & p, Integer ReliableUpdateFreq
+							) : 
+	GeneralEvenOddRatioRationalMixedPrecPseudoFermionAction<Impl,ImplF>(_NumOp, _DenOp,_NumOpF, _DenOpF, transcribe(p),ReliableUpdateFreq){}
+
+      virtual std::string action_name(){return "OneFlavourEvenOddRatioRationalPseudoFermionAction";}      
+    };
+
 NAMESPACE_END(Grid);
 
 #endif

Grid/qcd/action/pseudofermion/OneFlavourRationalRatio.h

@@ -85,7 +85,12 @@ NAMESPACE_BEGIN(Grid);
 	PowerNegQuarter.Init(remez,param.tolerance,true);
       };
 
-      virtual std::string action_name(){return "OneFlavourRatioRationalPseudoFermionAction";}
+      virtual std::string action_name(){
+	std::stringstream sstream;
+	sstream<<"OneFlavourRatioRationalPseudoFermionAction("
+	       <<DenOp.Mass()<<") / det("<<NumOp.Mass()<<")";
+	return sstream.str();
+      }
       
       virtual std::string LogParameters(){
 	std::stringstream sstream;

Grid/qcd/hmc/HMC.h

@@ -53,6 +53,7 @@ struct HMCparameters: Serializable {
                                   Integer, Trajectories, /* @brief Number of sweeps in this run */
                                   bool, MetropolisTest,
                                   Integer, NoMetropolisUntil,
+				  bool, PerformRandomShift, /* @brief Randomly shift the gauge configuration at the start of a trajectory */
                                   std::string, StartingType,
                                   IntegratorParameters, MD)
 
@@ -63,6 +64,7 @@ struct HMCparameters: Serializable {
     StartTrajectory   = 0;
     Trajectories      = 10;
     StartingType      = "HotStart";
+    PerformRandomShift = true;
     /////////////////////////////////
   }
 
@@ -83,6 +85,7 @@ struct HMCparameters: Serializable {
     std::cout << GridLogMessage << "[HMC parameters] Start trajectory        : " << StartTrajectory << "\n";
     std::cout << GridLogMessage << "[HMC parameters] Metropolis test (on/off): " << std::boolalpha << MetropolisTest << "\n";
     std::cout << GridLogMessage << "[HMC parameters] Thermalization trajs    : " << NoMetropolisUntil << "\n";
+    std::cout << GridLogMessage << "[HMC parameters] Doing random shift      : " << std::boolalpha << PerformRandomShift << "\n";
     std::cout << GridLogMessage << "[HMC parameters] Starting type           : " << StartingType << "\n";
     MD.print_parameters();
   }
@@ -95,6 +98,7 @@ private:
   const HMCparameters Params;
 
   typedef typename IntegratorType::Field Field;
+  typedef typename IntegratorType::FieldImplementation FieldImplementation;
   typedef std::vector< HmcObservable<Field> * > ObsListType;
 
   //pass these from the resource manager
@@ -138,26 +142,37 @@ private:
 
     GridBase *Grid = U.Grid();
 
-    //////////////////////////////////////////////////////////////////////////////////////////////////////
-    // Mainly for DDHMC perform a random translation of U modulo volume
-    //////////////////////////////////////////////////////////////////////////////////////////////////////
-    std::cout << GridLogMessage << "--------------------------------------------------\n";
-    std::cout << GridLogMessage << "Random shifting gauge field by [";
-    for(int d=0;d<Grid->Nd();d++) {
+    if(Params.PerformRandomShift){
+      //////////////////////////////////////////////////////////////////////////////////////////////////////
+      // Mainly for DDHMC perform a random translation of U modulo volume
+      //////////////////////////////////////////////////////////////////////////////////////////////////////
+      std::cout << GridLogMessage << "--------------------------------------------------\n";
+      std::cout << GridLogMessage << "Random shifting gauge field by [";
 
-      int L = Grid->GlobalDimensions()[d];
+      std::vector<typename FieldImplementation::GaugeLinkField> Umu(Grid->Nd(), U.Grid());
+      for(int mu=0;mu<Grid->Nd();mu++) Umu[mu] = PeekIndex<LorentzIndex>(U, mu);
 
-      RealD rn_uniform;  random(sRNG, rn_uniform);
+      for(int d=0;d<Grid->Nd();d++) {
 
-      int shift = (int) (rn_uniform*L);
+	int L = Grid->GlobalDimensions()[d];
 
-      std::cout << shift;
-      if(d<Grid->Nd()-1) std::cout <<",";
-      else               std::cout <<"]\n";
+	RealD rn_uniform;  random(sRNG, rn_uniform);
+
+	int shift = (int) (rn_uniform*L);
+
+	std::cout << shift;
+	if(d<Grid->Nd()-1) std::cout <<",";
+	else               std::cout <<"]\n";
       
-      U = Cshift(U,d,shift);
+	//shift all fields together in a way that respects the gauge BCs
+	for(int mu=0; mu < Grid->Nd(); mu++)
+	  Umu[mu] = FieldImplementation::CshiftLink(Umu[mu],d,shift);
+      }
+
+      for(int mu=0;mu<Grid->Nd();mu++) PokeIndex<LorentzIndex>(U,Umu[mu],mu);
+      
+      std::cout << GridLogMessage << "--------------------------------------------------\n";
     }
-    std::cout << GridLogMessage << "--------------------------------------------------\n";
 
     TheIntegrator.reset_timer();
     

Grid/qcd/hmc/integrators/Integrator.h

@@ -63,10 +63,10 @@ public:
 };
 
 /*! @brief Class for Molecular Dynamics management */
-template <class FieldImplementation, class SmearingPolicy, class RepresentationPolicy>
+template <class FieldImplementation_, class SmearingPolicy, class RepresentationPolicy>
 class Integrator {
 protected:
-
+  typedef FieldImplementation_ FieldImplementation;
   typedef typename FieldImplementation::Field MomentaField;  //for readability
   typedef typename FieldImplementation::Field Field;
 
@@ -143,9 +143,10 @@ protected:
       force = FieldImplementation::projectForce(force); // Ta for gauge fields
       double end_force = usecond();
 
+      //      DumpSliceNorm("force ",force,Nd-1);
       MomFilter->applyFilter(force);
       std::cout << GridLogIntegrator << " update_P : Level [" << level <<"]["<<a <<"] "<<name<< std::endl;
-      DumpSliceNorm("force ",force,Nd-1);
+      DumpSliceNorm("force filtered ",force,Nd-1);
       
       Real force_abs   = std::sqrt(norm2(force)/U.Grid()->gSites()); //average per-site norm.  nb. norm2(latt) = \sum_x norm2(latt[x]) 
       Real impulse_abs = force_abs * ep * HMC_MOMENTUM_DENOMINATOR;    
@@ -153,7 +154,7 @@ protected:
       Real force_max   = std::sqrt(maxLocalNorm2(force));
       Real impulse_max = force_max * ep * HMC_MOMENTUM_DENOMINATOR;    
 
-      as[level].actions.at(a)->deriv_log(force_abs,force_max);
+      as[level].actions.at(a)->deriv_log(force_abs,force_max,impulse_abs,impulse_max);
       
       std::cout << GridLogIntegrator<< "["<<level<<"]["<<a<<"] Force average: " << force_abs <<" "<<name<<std::endl;
       std::cout << GridLogIntegrator<< "["<<level<<"]["<<a<<"] Force max    : " << force_max <<" "<<name<<std::endl;
@@ -285,6 +286,8 @@ public:
 		  <<"["<<level<<"]["<< actionID<<"] : "
 		  <<" force max " << as[level].actions.at(actionID)->deriv_max_average()
 		  <<" norm "      << as[level].actions.at(actionID)->deriv_norm_average()
+		  <<" Fdt max  "  << as[level].actions.at(actionID)->Fdt_max_average()
+		  <<" Fdt norm "  << as[level].actions.at(actionID)->Fdt_norm_average()
 		  <<" calls "     << as[level].actions.at(actionID)->deriv_num
 		  << std::endl;
       }

Grid/qcd/hmc/integrators/Integrator_algorithm.h

@@ -92,10 +92,11 @@ NAMESPACE_BEGIN(Grid);
  *  P 1/2                            P 1/2
  */
 
-template <class FieldImplementation, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
-class LeapFrog : public Integrator<FieldImplementation, SmearingPolicy, RepresentationPolicy> 
+template <class FieldImplementation_, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
+class LeapFrog : public Integrator<FieldImplementation_, SmearingPolicy, RepresentationPolicy> 
 {
 public:
+  typedef FieldImplementation_ FieldImplementation;
   typedef LeapFrog<FieldImplementation, SmearingPolicy, RepresentationPolicy> Algorithm;
   INHERIT_FIELD_TYPES(FieldImplementation);
 
@@ -135,13 +136,14 @@ public:
   }
 };
 
-template <class FieldImplementation, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
-class MinimumNorm2 : public Integrator<FieldImplementation, SmearingPolicy, RepresentationPolicy> 
+template <class FieldImplementation_, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
+class MinimumNorm2 : public Integrator<FieldImplementation_, SmearingPolicy, RepresentationPolicy> 
 {
 private:
   const RealD lambda = 0.1931833275037836;
 
 public:
+  typedef FieldImplementation_ FieldImplementation;
   INHERIT_FIELD_TYPES(FieldImplementation);
 
   MinimumNorm2(GridBase* grid, IntegratorParameters Par, ActionSet<Field, RepresentationPolicy>& Aset, SmearingPolicy& Sm)
@@ -192,8 +194,8 @@ public:
   }
 };
 
-template <class FieldImplementation, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
-class ForceGradient : public Integrator<FieldImplementation, SmearingPolicy, RepresentationPolicy> 
+template <class FieldImplementation_, class SmearingPolicy, class RepresentationPolicy = Representations<FundamentalRepresentation> >
+class ForceGradient : public Integrator<FieldImplementation_, SmearingPolicy, RepresentationPolicy> 
 {
 private:
   const RealD lambda = 1.0 / 6.0;
@@ -202,6 +204,7 @@ private:
   const RealD theta = 0.0;
 
 public:
+  typedef FieldImplementation_ FieldImplementation;
   INHERIT_FIELD_TYPES(FieldImplementation);
 
   // Looks like dH scales as dt^4. tested wilson/wilson 2 level.

Grid/qcd/observables/topological_charge.h

@@ -31,15 +31,16 @@ directory
 
 NAMESPACE_BEGIN(Grid);
 
+
 struct TopologySmearingParameters : Serializable {
   GRID_SERIALIZABLE_CLASS_MEMBERS(TopologySmearingParameters,
-				  int, steps,
-				  float, step_size,
 				  int, meas_interval,
-				  float, maxTau);
+				  float, init_step_size,
+				  float, maxTau,
+				  float, tolerance);
 
-  TopologySmearingParameters(int s = 0, float ss = 0.0f, int mi = 0, float mT = 0.0f):
-    steps(s), step_size(ss), meas_interval(mi), maxTau(mT){}
+ TopologySmearingParameters(float ss = 0.0f, int mi = 0, float mT = 0.0f, float tol = 1e-4):
+  init_step_size(ss), meas_interval(mi), maxTau(mT), tolerance(tol){}
 
   template < class ReaderClass >
   TopologySmearingParameters(Reader<ReaderClass>& Reader){
@@ -97,8 +98,8 @@ public:
         
       if (Pars.do_smearing){
 	// using wilson flow by default here
-	WilsonFlow<PeriodicGimplR> WF(Pars.Smearing.steps, Pars.Smearing.step_size, Pars.Smearing.meas_interval);
-	WF.smear_adaptive(Usmear, U, Pars.Smearing.maxTau);
+	WilsonFlowAdaptive<PeriodicGimplR> WF(Pars.Smearing.init_step_size, Pars.Smearing.maxTau, Pars.Smearing.tolerance, Pars.Smearing.meas_interval);
+	WF.smear(Usmear, U);
 	Real T0   = WF.energyDensityPlaquette(Pars.Smearing.maxTau, Usmear);
 	std::cout << GridLogMessage << std::setprecision(std::numeric_limits<Real>::digits10 + 1)
 		  << "T0                : [ " << traj << " ] "<< T0 << std::endl;

Grid/qcd/smearing/WilsonFlow.h

@@ -33,27 +33,25 @@ directory
 NAMESPACE_BEGIN(Grid);
 
 template <class Gimpl>
-class WilsonFlow: public Smear<Gimpl>{
+class WilsonFlowBase: public Smear<Gimpl>{
 public:
   //Store generic measurements to take during smearing process using std::function
   typedef std::function<void(int, RealD, const typename Gimpl::GaugeField &)> FunctionType;  //int: step,  RealD: flow time,  GaugeField : the gauge field
-  
-private:
-  unsigned int Nstep;
-  RealD epsilon; //for regular smearing this is the time step, for adaptive it is the initial time step
- 
+
+protected:
   std::vector< std::pair<int, FunctionType> > functions; //The int maps to the measurement frequency
 
   mutable WilsonGaugeAction<Gimpl> SG;
-
-  //Evolve the gauge field by 1 step and update tau
-  void evolve_step(typename Gimpl::GaugeField &U, RealD &tau) const;
-  //Evolve the gauge field by 1 step and update tau and the current time step eps
-  void evolve_step_adaptive(typename Gimpl::GaugeField&U, RealD &tau, RealD &eps, RealD maxTau) const;
-
+   
 public:
   INHERIT_GIMPL_TYPES(Gimpl)
 
+  explicit WilsonFlowBase(unsigned int meas_interval =1):
+    SG(WilsonGaugeAction<Gimpl>(3.0)) {
+    // WilsonGaugeAction with beta 3.0
+    setDefaultMeasurements(meas_interval);
+  }
+    
   void resetActions(){ functions.clear(); }
 
   void addMeasurement(int meas_interval, FunctionType meas){ functions.push_back({meas_interval, meas}); }
@@ -64,34 +62,11 @@ public:
   //and output to stdout
   void setDefaultMeasurements(int topq_meas_interval = 1);
 
-  explicit WilsonFlow(unsigned int Nstep, RealD epsilon, unsigned int interval = 1):
-  Nstep(Nstep),
-    epsilon(epsilon),
-    SG(WilsonGaugeAction<Gimpl>(3.0)) {
-    // WilsonGaugeAction with beta 3.0
-    assert(epsilon > 0.0);
-    LogMessage();
-    setDefaultMeasurements(interval);
-  }
-
-  void LogMessage() {
-    std::cout << GridLogMessage
-	      << "[WilsonFlow] Nstep   : " << Nstep << std::endl;
-    std::cout << GridLogMessage
-	      << "[WilsonFlow] epsilon : " << epsilon << std::endl;
-    std::cout << GridLogMessage
-	      << "[WilsonFlow] full trajectory : " << Nstep * epsilon << std::endl;
-  }
-
-  virtual void smear(GaugeField&, const GaugeField&) const;
-
-  virtual void derivative(GaugeField&, const GaugeField&, const GaugeField&) const {
+  void derivative(GaugeField&, const GaugeField&, const GaugeField&) const override{
     assert(0);
     // undefined for WilsonFlow
   }
 
-  void smear_adaptive(GaugeField&, const GaugeField&, RealD maxTau) const;
-
   //Compute t^2 <E(t)> for time t from the plaquette
   static RealD energyDensityPlaquette(const RealD t, const GaugeField& U);
 
@@ -115,82 +90,63 @@ public:
   std::vector<RealD> flowMeasureEnergyDensityCloverleaf(const GaugeField& U, int measure_interval = 1);
 };
 
+//Basic iterative Wilson flow
+template <class Gimpl>
+class WilsonFlow: public WilsonFlowBase<Gimpl>{
+private:
+  int Nstep; //number of steps
+  RealD epsilon;  //step size
+
+  //Evolve the gauge field by 1 step of size eps and update tau
+  void evolve_step(typename Gimpl::GaugeField &U, RealD &tau) const;
+
+public:
+  INHERIT_GIMPL_TYPES(Gimpl)
+
+  //Integrate the Wilson flow for Nstep steps of size epsilon
+  WilsonFlow(const RealD epsilon, const int Nstep, unsigned int meas_interval = 1): WilsonFlowBase<Gimpl>(meas_interval), Nstep(Nstep), epsilon(epsilon){}
+
+  void smear(GaugeField& out, const GaugeField& in) const override;
+};
+
+//Wilson flow with adaptive step size
+template <class Gimpl>
+class WilsonFlowAdaptive: public WilsonFlowBase<Gimpl>{
+private:
+  RealD init_epsilon; //initial step size
+  RealD maxTau; //integrate to t=maxTau
+  RealD tolerance; //integration error tolerance
+
+  //Evolve the gauge field by 1 step and update tau and the current time step eps
+  //
+  //If the step size eps is too large that a significant integration error results,
+  //the gauge field (U) and tau will not be updated and the function will return 0; eps will be adjusted to a smaller
+  //value for the next iteration.
+  //
+  //For a successful integration step the function will return 1
+  int evolve_step_adaptive(typename Gimpl::GaugeField&U, RealD &tau, RealD &eps) const;
+
+public:
+  INHERIT_GIMPL_TYPES(Gimpl)
+
+  WilsonFlowAdaptive(const RealD init_epsilon, const RealD maxTau, const RealD tolerance, unsigned int meas_interval = 1): 
+  WilsonFlowBase<Gimpl>(meas_interval), init_epsilon(init_epsilon), maxTau(maxTau), tolerance(tolerance){}
+
+  void smear(GaugeField& out, const GaugeField& in) const override;
+};
 
 ////////////////////////////////////////////////////////////////////////////////
 // Implementations
 ////////////////////////////////////////////////////////////////////////////////
 template <class Gimpl>
-void WilsonFlow<Gimpl>::evolve_step(typename Gimpl::GaugeField &U, RealD &tau) const{
-  GaugeField Z(U.Grid());
-  GaugeField tmp(U.Grid());
-  SG.deriv(U, Z);
-  Z *= 0.25;                                  // Z0 = 1/4 * F(U)
-  Gimpl::update_field(Z, U, -2.0*epsilon);    // U = W1 = exp(ep*Z0)*W0
-
-  Z *= -17.0/8.0;
-  SG.deriv(U, tmp); Z += tmp;                 // -17/32*Z0 +Z1
-  Z *= 8.0/9.0;                               // Z = -17/36*Z0 +8/9*Z1
-  Gimpl::update_field(Z, U, -2.0*epsilon);    // U_= W2 = exp(ep*Z)*W1
-
-  Z *= -4.0/3.0;
-  SG.deriv(U, tmp); Z += tmp;                 // 4/3*(17/36*Z0 -8/9*Z1) +Z2
-  Z *= 3.0/4.0;                               // Z = 17/36*Z0 -8/9*Z1 +3/4*Z2
-  Gimpl::update_field(Z, U, -2.0*epsilon);    // V(t+e) = exp(ep*Z)*W2
-  tau += epsilon;
-}
-
-template <class Gimpl>
-void WilsonFlow<Gimpl>::evolve_step_adaptive(typename Gimpl::GaugeField &U, RealD &tau, RealD &eps, RealD maxTau) const{
-  if (maxTau - tau < eps){
-    eps = maxTau-tau;
-  }
-  //std::cout << GridLogMessage << "Integration epsilon : " << epsilon << std::endl;
-  GaugeField Z(U.Grid());
-  GaugeField Zprime(U.Grid());
-  GaugeField tmp(U.Grid()), Uprime(U.Grid());
-  Uprime = U;
-  SG.deriv(U, Z);
-  Zprime = -Z;
-  Z *= 0.25;                                  // Z0 = 1/4 * F(U)
-  Gimpl::update_field(Z, U, -2.0*eps);    // U = W1 = exp(ep*Z0)*W0
-
-  Z *= -17.0/8.0;
-  SG.deriv(U, tmp); Z += tmp;                 // -17/32*Z0 +Z1
-  Zprime += 2.0*tmp;
-  Z *= 8.0/9.0;                               // Z = -17/36*Z0 +8/9*Z1
-  Gimpl::update_field(Z, U, -2.0*eps);    // U_= W2 = exp(ep*Z)*W1
-    
-
-  Z *= -4.0/3.0;
-  SG.deriv(U, tmp); Z += tmp;                 // 4/3*(17/36*Z0 -8/9*Z1) +Z2
-  Z *= 3.0/4.0;                               // Z = 17/36*Z0 -8/9*Z1 +3/4*Z2
-  Gimpl::update_field(Z, U, -2.0*eps);    // V(t+e) = exp(ep*Z)*W2
-
-  // Ramos 
-  Gimpl::update_field(Zprime, Uprime, -2.0*eps); // V'(t+e) = exp(ep*Z')*W0
-  // Compute distance as norm^2 of the difference
-  GaugeField diffU = U - Uprime;
-  RealD diff = norm2(diffU);
-  // adjust integration step
-    
-  tau += eps;
-  //std::cout << GridLogMessage << "Adjusting integration step with distance: " << diff << std::endl;
-    
-  eps = eps*0.95*std::pow(1e-4/diff,1./3.);
-  //std::cout << GridLogMessage << "New epsilon : " << epsilon << std::endl;
-
-}
-
-
-template <class Gimpl>
-RealD WilsonFlow<Gimpl>::energyDensityPlaquette(const RealD t, const GaugeField& U){
+RealD WilsonFlowBase<Gimpl>::energyDensityPlaquette(const RealD t, const GaugeField& U){
   static WilsonGaugeAction<Gimpl> SG(3.0);
   return 2.0 * t * t * SG.S(U)/U.Grid()->gSites();
 }
 
 //Compute t^2 <E(t)> for time from the 1x1 cloverleaf form
 template <class Gimpl>
-RealD WilsonFlow<Gimpl>::energyDensityCloverleaf(const RealD t, const GaugeField& U){
+RealD WilsonFlowBase<Gimpl>::energyDensityCloverleaf(const RealD t, const GaugeField& U){
   typedef typename Gimpl::GaugeLinkField GaugeMat;
   typedef typename Gimpl::GaugeField GaugeLorentz;
 
@@ -215,7 +171,7 @@ RealD WilsonFlow<Gimpl>::energyDensityCloverleaf(const RealD t, const GaugeField
 
 
 template <class Gimpl>
-std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityPlaquette(GaugeField &V, const GaugeField& U, int measure_interval){
+std::vector<RealD> WilsonFlowBase<Gimpl>::flowMeasureEnergyDensityPlaquette(GaugeField &V, const GaugeField& U, int measure_interval){
   std::vector<RealD> out;
   resetActions();
   addMeasurement(measure_interval, [&out](int step, RealD t, const typename Gimpl::GaugeField &U){ 
@@ -227,13 +183,13 @@ std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityPlaquette(GaugeFie
 }
 
 template <class Gimpl>
-std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityPlaquette(const GaugeField& U, int measure_interval){
+std::vector<RealD> WilsonFlowBase<Gimpl>::flowMeasureEnergyDensityPlaquette(const GaugeField& U, int measure_interval){
   GaugeField V(U);
   return flowMeasureEnergyDensityPlaquette(V,U, measure_interval);
 }
 
 template <class Gimpl>
-std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityCloverleaf(GaugeField &V, const GaugeField& U, int measure_interval){
+std::vector<RealD> WilsonFlowBase<Gimpl>::flowMeasureEnergyDensityCloverleaf(GaugeField &V, const GaugeField& U, int measure_interval){
   std::vector<RealD> out;
   resetActions();
   addMeasurement(measure_interval, [&out](int step, RealD t, const typename Gimpl::GaugeField &U){ 
@@ -245,16 +201,52 @@ std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityCloverleaf(GaugeFi
 }
 
 template <class Gimpl>
-std::vector<RealD> WilsonFlow<Gimpl>::flowMeasureEnergyDensityCloverleaf(const GaugeField& U, int measure_interval){
+std::vector<RealD> WilsonFlowBase<Gimpl>::flowMeasureEnergyDensityCloverleaf(const GaugeField& U, int measure_interval){
   GaugeField V(U);
   return flowMeasureEnergyDensityCloverleaf(V,U, measure_interval);
 }
 
+template <class Gimpl>
+void WilsonFlowBase<Gimpl>::setDefaultMeasurements(int topq_meas_interval){
+  addMeasurement(1, [](int step, RealD t, const typename Gimpl::GaugeField &U){
+      std::cout << GridLogMessage << "[WilsonFlow] Energy density (plaq) : "  << step << "  " << t << "  " << energyDensityPlaquette(t,U) << std::endl;
+    });
+  addMeasurement(topq_meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
+      std::cout << GridLogMessage << "[WilsonFlow] Top. charge           : "  << step << "  " << WilsonLoops<Gimpl>::TopologicalCharge(U) << std::endl;
+    });
+}
 
 
-//#define WF_TIMING 
+
+template <class Gimpl>
+void WilsonFlow<Gimpl>::evolve_step(typename Gimpl::GaugeField &U, RealD &tau) const{
+  GaugeField Z(U.Grid());
+  GaugeField tmp(U.Grid());
+  this->SG.deriv(U, Z);
+  Z *= 0.25;                                  // Z0 = 1/4 * F(U)
+  Gimpl::update_field(Z, U, -2.0*epsilon);    // U = W1 = exp(ep*Z0)*W0
+
+  Z *= -17.0/8.0;
+  this->SG.deriv(U, tmp); Z += tmp;                 // -17/32*Z0 +Z1
+  Z *= 8.0/9.0;                               // Z = -17/36*Z0 +8/9*Z1
+  Gimpl::update_field(Z, U, -2.0*epsilon);    // U_= W2 = exp(ep*Z)*W1
+
+  Z *= -4.0/3.0;
+  this->SG.deriv(U, tmp); Z += tmp;                 // 4/3*(17/36*Z0 -8/9*Z1) +Z2
+  Z *= 3.0/4.0;                               // Z = 17/36*Z0 -8/9*Z1 +3/4*Z2
+  Gimpl::update_field(Z, U, -2.0*epsilon);    // V(t+e) = exp(ep*Z)*W2
+  tau += epsilon;
+}
+
 template <class Gimpl>
 void WilsonFlow<Gimpl>::smear(GaugeField& out, const GaugeField& in) const{
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] Nstep   : " << Nstep << std::endl;
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] epsilon : " << epsilon << std::endl;
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] full trajectory : " << Nstep * epsilon << std::endl;
+
   out = in;
   RealD taus = 0.;
   for (unsigned int step = 1; step <= Nstep; step++) { //step indicates the number of smearing steps applied at the time of measurement
@@ -266,37 +258,93 @@ void WilsonFlow<Gimpl>::smear(GaugeField& out, const GaugeField& in) const{
     std::cout << "Time to evolve " << diff.count() << " s\n";
 #endif
     //Perform measurements
-    for(auto const &meas : functions)
+    for(auto const &meas : this->functions)
       if( step % meas.first == 0 ) meas.second(step,taus,out);
   }
 }
 
+
+
 template <class Gimpl>
-void WilsonFlow<Gimpl>::smear_adaptive(GaugeField& out, const GaugeField& in, RealD maxTau) const{
-  out = in;
-  RealD taus = 0.;
-  RealD eps = epsilon;
-  unsigned int step = 0;
-  do{
-    step++;
-    //std::cout << GridLogMessage << "Evolution time :"<< taus << std::endl;
-    evolve_step_adaptive(out, taus, eps, maxTau);
-    //Perform measurements
-    for(auto const &meas : functions)
-      if( step % meas.first == 0 ) meas.second(step,taus,out);
-  } while (taus < maxTau);
+int WilsonFlowAdaptive<Gimpl>::evolve_step_adaptive(typename Gimpl::GaugeField &U, RealD &tau, RealD &eps) const{
+  if (maxTau - tau < eps){
+    eps = maxTau-tau;
+  }
+  //std::cout << GridLogMessage << "Integration epsilon : " << epsilon << std::endl;
+  GaugeField Z(U.Grid());
+  GaugeField Zprime(U.Grid());
+  GaugeField tmp(U.Grid()), Uprime(U.Grid()), Usave(U.Grid());
+  Uprime = U;
+  Usave = U;
+
+  this->SG.deriv(U, Z);
+  Zprime = -Z;
+  Z *= 0.25;                                  // Z0 = 1/4 * F(U)
+  Gimpl::update_field(Z, U, -2.0*eps);    // U = W1 = exp(ep*Z0)*W0
+
+  Z *= -17.0/8.0;
+  this->SG.deriv(U, tmp); Z += tmp;                 // -17/32*Z0 +Z1
+  Zprime += 2.0*tmp;
+  Z *= 8.0/9.0;                               // Z = -17/36*Z0 +8/9*Z1
+  Gimpl::update_field(Z, U, -2.0*eps);    // U_= W2 = exp(ep*Z)*W1
+    
+
+  Z *= -4.0/3.0;
+  this->SG.deriv(U, tmp); Z += tmp;                 // 4/3*(17/36*Z0 -8/9*Z1) +Z2
+  Z *= 3.0/4.0;                               // Z = 17/36*Z0 -8/9*Z1 +3/4*Z2
+  Gimpl::update_field(Z, U, -2.0*eps);    // V(t+e) = exp(ep*Z)*W2
+
+  // Ramos arXiv:1301.4388
+  Gimpl::update_field(Zprime, Uprime, -2.0*eps); // V'(t+e) = exp(ep*Z')*W0
+
+  // Compute distance using Ramos' definition
+  GaugeField diffU = U - Uprime;
+  RealD max_dist = 0;
+
+  for(int mu=0;mu<Nd;mu++){
+    typename Gimpl::GaugeLinkField diffU_mu = PeekIndex<LorentzIndex>(diffU, mu);
+    RealD dist_mu = sqrt( maxLocalNorm2(diffU_mu) ) /Nc/Nc; //maximize over sites
+    max_dist = std::max(max_dist, dist_mu); //maximize over mu
+  }
+  
+  int ret;
+  if(max_dist < tolerance) {
+    tau += eps;
+    ret = 1;
+  } else {
+    U = Usave;
+    ret = 0;
+  }
+  eps = eps*0.95*std::pow(tolerance/max_dist,1./3.);
+  std::cout << GridLogMessage << "Adaptive smearing : Distance: "<< max_dist <<" Step successful: " << ret << " New epsilon: " << eps << std::endl; 
+
+  return ret;
 }
 
 template <class Gimpl>
-void WilsonFlow<Gimpl>::setDefaultMeasurements(int topq_meas_interval){
-  addMeasurement(1, [](int step, RealD t, const typename Gimpl::GaugeField &U){
-      std::cout << GridLogMessage << "[WilsonFlow] Energy density (plaq) : "  << step << "  " << t << "  " << energyDensityPlaquette(t,U) << std::endl;
-    });
-  addMeasurement(topq_meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
-      std::cout << GridLogMessage << "[WilsonFlow] Top. charge           : "  << step << "  " << WilsonLoops<Gimpl>::TopologicalCharge(U) << std::endl;
-    });
+void WilsonFlowAdaptive<Gimpl>::smear(GaugeField& out, const GaugeField& in) const{
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] initial epsilon : " << init_epsilon << std::endl;
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] full trajectory : " << maxTau << std::endl;
+  std::cout << GridLogMessage
+	    << "[WilsonFlow] tolerance   : " << tolerance << std::endl;
+  out = in;
+  RealD taus = 0.;
+  RealD eps = init_epsilon;
+  unsigned int step = 0;
+  do{
+    int step_success = evolve_step_adaptive(out, taus, eps); 
+    step += step_success; //step will not be incremented if the integration step fails
+
+    //Perform measurements
+    if(step_success)
+      for(auto const &meas : this->functions)
+	if( step % meas.first == 0 ) meas.second(step,taus,out);
+  } while (taus < maxTau);
 }
 
 
+
 NAMESPACE_END(Grid);
 

Grid/qcd/utils/CovariantCshift.h

@@ -227,26 +227,38 @@ namespace ConjugateBC {
   //shift = -1
   //Out(x) = U_\mu(x-mu)  | x_\mu != 0
   //       = U*_\mu(L-1)  | x_\mu == 0
+  //shift = 2
+  //Out(x) = U_\mu(x+2\hat\mu)  | x_\mu < L-2
+  //       = U*_\mu(1)  | x_\mu == L-1
+  //       = U*_\mu(0)  | x_\mu == L-2
+  //shift = -2
+  //Out(x) = U_\mu(x-2mu)  | x_\mu > 1
+  //       = U*_\mu(L-2)  | x_\mu == 0
+  //       = U*_\mu(L-1)  | x_\mu == 1
+  //etc
   template<class gauge> Lattice<gauge>
   CshiftLink(const Lattice<gauge> &Link, int mu, int shift)
   {
     GridBase *grid = Link.Grid();
-    int Lmu = grid->GlobalDimensions()[mu] - 1;
+    int Lmu = grid->GlobalDimensions()[mu];
+    assert(abs(shift) < Lmu && "Invalid shift value");
 
     Lattice<iScalar<vInteger>> coor(grid);
     LatticeCoordinate(coor, mu);
 
     Lattice<gauge> tmp(grid);
-    if(shift == 1){
-      tmp = Cshift(Link, mu, 1);
-      tmp = where(coor == Lmu, conjugate(tmp), tmp);
+    if(shift > 0){
+      tmp = Cshift(Link, mu, shift);
+      tmp = where(coor >= Lmu-shift, conjugate(tmp), tmp);
       return tmp;
-    }else if(shift == -1){
+    }else if(shift < 0){
       tmp = Link;
-      tmp = where(coor == Lmu, conjugate(tmp), tmp);
-      return Cshift(tmp, mu, -1);
-    }else assert(0 && "Invalid shift value");
-    return tmp; //shuts up the compiler fussing about the return type
+      tmp = where(coor >= Lmu+shift, conjugate(tmp), tmp);
+      return Cshift(tmp, mu, shift);
+    }
+    
+    //shift == 0
+    return Link;
   }
 
 }

Grid/qcd/utils/GaugeFix.h

@@ -72,12 +72,12 @@ public:
 
   //Fix the gauge field Umu
   //0 < alpha < 1 is related to the step size, cf https://arxiv.org/pdf/1405.5812.pdf
-  static void SteepestDescentGaugeFix(GaugeLorentz &Umu,Real & alpha,int maxiter,Real Omega_tol, Real Phi_tol,bool Fourier=false,int orthog=-1,bool err_on_no_converge=true) {
+  static void SteepestDescentGaugeFix(GaugeLorentz &Umu,Real alpha,int maxiter,Real Omega_tol, Real Phi_tol,bool Fourier=false,int orthog=-1,bool err_on_no_converge=true) {
     GridBase *grid = Umu.Grid();
     GaugeMat xform(grid);
     SteepestDescentGaugeFix(Umu,xform,alpha,maxiter,Omega_tol,Phi_tol,Fourier,orthog,err_on_no_converge);
   }
-  static void SteepestDescentGaugeFix(GaugeLorentz &Umu,GaugeMat &xform,Real & alpha,int maxiter,Real Omega_tol, Real Phi_tol,bool Fourier=false,int orthog=-1,bool err_on_no_converge=true) {
+  static void SteepestDescentGaugeFix(GaugeLorentz &Umu,GaugeMat &xform,Real alpha,int maxiter,Real Omega_tol, Real Phi_tol,bool Fourier=false,int orthog=-1,bool err_on_no_converge=true) {
   //Fix the gauge field Umu and also return the gauge transformation from the original gauge field, xform
 
     GridBase *grid = Umu.Grid();

Grid/simd/Grid_sse4.h

@@ -35,7 +35,7 @@ Author: neo <cossu@post.kek.jp>
 */
 // Time-stamp: <2015-06-16 23:27:54 neo>
 //----------------------------------------------------------------------
-
+#include <immintrin.h>
 #include <pmmintrin.h>
 
 NAMESPACE_BEGIN(Grid);

Grid/stencil/Stencil.h

@@ -290,6 +290,8 @@ public:
   std::vector<Decompress> DecompressionsSHM;
   std::vector<CopyReceiveBuffer> CopyReceiveBuffers ;
   std::vector<CachedTransfer> CachedTransfers;
+  std::vector<CommsRequest_t> MpiReqs;
+  
   ///////////////////////////////////////////////////////////
   // Unified Comms buffers for all directions
   ///////////////////////////////////////////////////////////
@@ -357,9 +359,9 @@ public:
   ////////////////////////////////////////////////////////////////////////
   void CommunicateBegin(std::vector<std::vector<CommsRequest_t> > &reqs)
   {
-    reqs.resize(Packets.size());
+    accelerator_barrier();
     for(int i=0;i<Packets.size();i++){
-      _grid->StencilSendToRecvFromBegin(reqs[i],
+      _grid->StencilSendToRecvFromBegin(MpiReqs,
 					Packets[i].send_buf,
 					Packets[i].to_rank,Packets[i].do_send,
 					Packets[i].recv_buf,
@@ -370,41 +372,19 @@ public:
 
   void CommunicateComplete(std::vector<std::vector<CommsRequest_t> > &reqs)
   {
-    for(int i=0;i<Packets.size();i++){
-      _grid->StencilSendToRecvFromComplete(reqs[i],i);
-    }
+    _grid->StencilSendToRecvFromComplete(MpiReqs,0);
   }
   ////////////////////////////////////////////////////////////////////////
   // Blocking send and receive. Either sequential or parallel.
   ////////////////////////////////////////////////////////////////////////
   void Communicate(void)
   {
-    if ( CartesianCommunicator::CommunicatorPolicy == CartesianCommunicator::CommunicatorPolicySequential ){
-      /////////////////////////////////////////////////////////
-      // several way threaded on different communicators.
-      // Cannot combine with Dirichlet operators
-      // This scheme is needed on Intel Omnipath for best performance
-      // Deprecate once there are very few omnipath clusters
-      /////////////////////////////////////////////////////////
-      int nthreads = CartesianCommunicator::nCommThreads;
-      int old = GridThread::GetThreads();
-      GridThread::SetThreads(nthreads);
-      thread_for(i,Packets.size(),{
-	  _grid->StencilSendToRecvFrom(Packets[i].send_buf,
-				       Packets[i].to_rank,Packets[i].do_send,
-				       Packets[i].recv_buf,
-				       Packets[i].from_rank,Packets[i].do_recv,
-				       Packets[i].bytes,i);
-      });
-      GridThread::SetThreads(old);
-    } else { 
-      /////////////////////////////////////////////////////////
-      // Concurrent and non-threaded asynch calls to MPI
-      /////////////////////////////////////////////////////////
-      std::vector<std::vector<CommsRequest_t> > reqs;
-      this->CommunicateBegin(reqs);
-      this->CommunicateComplete(reqs);
-    }
+    /////////////////////////////////////////////////////////
+    // Concurrent and non-threaded asynch calls to MPI
+    /////////////////////////////////////////////////////////
+    std::vector<std::vector<CommsRequest_t> > reqs;
+    this->CommunicateBegin(reqs);
+    this->CommunicateComplete(reqs);
   }
 
   template<class compressor> void HaloExchange(const Lattice<vobj> &source,compressor &compress)
@@ -484,7 +464,6 @@ public:
     face_table_computed=1;
     assert(u_comm_offset==_unified_buffer_size);
 
-    accelerator_barrier();
   }
 
   /////////////////////////
@@ -499,6 +478,7 @@ public:
     Packets.resize(0);
     CopyReceiveBuffers.resize(0);
     CachedTransfers.resize(0);
+    MpiReqs.resize(0);
   }
   void AddCopy(void *from,void * to, Integer bytes)
   {
@@ -711,7 +691,9 @@ public:
     this->_comms_recv.resize(npoints); 
     this->same_node.resize(npoints);
 
-    if ( p.dirichlet.size() ) DirichletBlock(p.dirichlet); // comms send/recv set up
+    if ( p.dirichlet.size() ==0 ) p.dirichlet.resize(grid->Nd(),0);
+
+    DirichletBlock(p.dirichlet); // comms send/recv set up
 
     _unified_buffer_size=0;
     surface_list.resize(0);
@@ -793,7 +775,6 @@ public:
       u_simd_recv_buf[l] = (cobj *)_grid->ShmBufferMalloc(_unified_buffer_size*sizeof(cobj));
       u_simd_send_buf[l] = (cobj *)_grid->ShmBufferMalloc(_unified_buffer_size*sizeof(cobj));
     }
-
     PrecomputeByteOffsets();
   }
 
@@ -1105,7 +1086,6 @@ public:
 	  // Gather locally
 	  ////////////////////////////////////////////////////////
 	  assert(send_buf!=NULL);
-
 	  Gather_plane_simple_table(face_table[face_idx],rhs,send_buf,compress,comm_off,so);
 	}
 
@@ -1212,8 +1192,9 @@ public:
 				  face_table[face_idx].size()*sizeof(face_table_host[0]));
 	}
 
-	if ( comms_send || comms_recv )
+	if ( comms_send || comms_recv ) {
 	  Gather_plane_exchange_table(face_table[face_idx],rhs,spointers,dimension,sx,cbmask,compress,permute_type);
+	}
 	face_idx++;
 
 	//spointers[0] -- low
@@ -1270,10 +1251,6 @@ public:
     return 0;
   }
 
-  void ZeroCounters(void) { };
-
-  void Report(void) {   };
-
 };
 NAMESPACE_END(Grid);
 

Grid/threads/Accelerator.cc

@@ -1,6 +1,7 @@
 #include <Grid/GridCore.h>
 
 NAMESPACE_BEGIN(Grid);
+int      world_rank; // Use to control world rank for print guarding
 int      acceleratorAbortOnGpuError=1;
 uint32_t accelerator_threads=2;
 uint32_t acceleratorThreads(void)       {return accelerator_threads;};
@@ -16,7 +17,7 @@ void     acceleratorThreads(uint32_t t) {accelerator_threads = t;};
 #ifdef GRID_CUDA
 cudaDeviceProp *gpu_props;
 cudaStream_t copyStream;
-cudaStream_t cpuStream;
+cudaStream_t computeStream;
 void acceleratorInit(void)
 {
   int nDevices = 1;
@@ -24,7 +25,8 @@ void acceleratorInit(void)
   gpu_props = new cudaDeviceProp[nDevices];
 
   char * localRankStr = NULL;
-  int rank = 0, world_rank=0; 
+  int rank = 0;
+  world_rank=0; 
   if ((localRankStr = getenv(ENV_RANK_OMPI   )) != NULL) { world_rank = atoi(localRankStr);}
   if ((localRankStr = getenv(ENV_RANK_MVAPICH)) != NULL) { world_rank = atoi(localRankStr);}
   if ((localRankStr = getenv(ENV_RANK_SLURM  )) != NULL) { world_rank = atoi(localRankStr);}
@@ -99,7 +101,7 @@ void acceleratorInit(void)
 
   cudaSetDevice(device);
   cudaStreamCreate(&copyStream);
-  cudaStreamCreate(&cpuStream);
+  cudaStreamCreate(&computeStream);
   const int len=64;
   char busid[len];
   if( rank == world_rank ) { 
@@ -114,7 +116,7 @@ void acceleratorInit(void)
 #ifdef GRID_HIP
 hipDeviceProp_t *gpu_props;
 hipStream_t copyStream;
-hipStream_t cpuStream;
+hipStream_t computeStream;
 void acceleratorInit(void)
 {
   int nDevices = 1;
@@ -122,7 +124,8 @@ void acceleratorInit(void)
   gpu_props = new hipDeviceProp_t[nDevices];
 
   char * localRankStr = NULL;
-  int rank = 0, world_rank=0; 
+  int rank = 0;
+  world_rank=0; 
   // We extract the local rank initialization using an environment variable
   if ((localRankStr = getenv(ENV_LOCAL_RANK_OMPI)) != NULL)
   {
@@ -183,7 +186,7 @@ void acceleratorInit(void)
 #endif
   hipSetDevice(device);
   hipStreamCreate(&copyStream);
-  hipStreamCreate(&cpuStream);
+  hipStreamCreate(&computeStream);
   const int len=64;
   char busid[len];
   if( rank == world_rank ) { 
@@ -210,7 +213,8 @@ void acceleratorInit(void)
 #endif
   
   char * localRankStr = NULL;
-  int rank = 0, world_rank=0; 
+  int rank = 0;
+  world_rank=0; 
 
   // We extract the local rank initialization using an environment variable
   if ((localRankStr = getenv(ENV_LOCAL_RANK_OMPI)) != NULL)

Grid/threads/Accelerator.h

@@ -107,7 +107,7 @@ void     acceleratorInit(void);
 
 extern int acceleratorAbortOnGpuError;
 extern cudaStream_t copyStream;
-extern cudaStream_t cpuStream;
+extern cudaStream_t computeStream;
 
 accelerator_inline int acceleratorSIMTlane(int Nsimd) {
 #ifdef GRID_SIMT
@@ -135,7 +135,7 @@ inline void cuda_mem(void)
     };									\
     dim3 cu_threads(nsimd,acceleratorThreads(),1);			\
     dim3 cu_blocks ((num1+nt-1)/nt,num2,1);				\
-    LambdaApply<<<cu_blocks,cu_threads,0,cpuStream>>>(num1,num2,nsimd,lambda);	\
+    LambdaApply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,nsimd,lambda);	\
   }
 
 #define accelerator_for6dNB(iter1, num1,				\
@@ -154,7 +154,7 @@ inline void cuda_mem(void)
     };									\
     dim3 cu_blocks (num1,num2,num3);					\
     dim3 cu_threads(num4,num5,num6);					\
-    Lambda6Apply<<<cu_blocks,cu_threads,0,cpuStream>>>(num1,num2,num3,num4,num5,num6,lambda); \
+    Lambda6Apply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,num3,num4,num5,num6,lambda); \
   }
 
 template<typename lambda>  __global__
@@ -190,7 +190,7 @@ void Lambda6Apply(uint64_t num1, uint64_t num2, uint64_t num3,
 
 #define accelerator_barrier(dummy)					\
   {									\
-    cudaStreamSynchronize(cpuStream);					\
+    cudaStreamSynchronize(computeStream);				\
     cudaError err = cudaGetLastError();					\
     if ( cudaSuccess != err ) {						\
       printf("accelerator_barrier(): Cuda error %s \n",			\
@@ -340,7 +340,7 @@ NAMESPACE_BEGIN(Grid);
 #define accelerator_inline __host__ __device__ inline
 
 extern hipStream_t copyStream;
-extern hipStream_t cpuStream;
+extern hipStream_t computeStream;
 /*These routines define mapping from thread grid to loop & vector lane indexing */
 accelerator_inline int acceleratorSIMTlane(int Nsimd) {
 #ifdef GRID_SIMT
@@ -362,16 +362,15 @@ accelerator_inline int acceleratorSIMTlane(int Nsimd) {
     dim3 hip_blocks ((num1+nt-1)/nt,num2,1); \
     if(hip_threads.x * hip_threads.y * hip_threads.z <= 64){ \
       hipLaunchKernelGGL(LambdaApply64,hip_blocks,hip_threads,		\
-			 0,cpuStream,					\
+   	                 0,computeStream,						\
 			 num1,num2,nsimd, lambda);			\
     } else { \
       hipLaunchKernelGGL(LambdaApply,hip_blocks,hip_threads,		\
-			 0,cpuStream,					\
+			 0,computeStream,				\
 			 num1,num2,nsimd, lambda);			\
     } \
   }
 
-
 template<typename lambda>  __global__
 __launch_bounds__(64,1)
 void LambdaApply64(uint64_t numx, uint64_t numy, uint64_t numz, lambda Lambda)
@@ -400,7 +399,7 @@ void LambdaApply(uint64_t numx, uint64_t numy, uint64_t numz, lambda Lambda)
 
 #define accelerator_barrier(dummy)				\
   {								\
-    hipStreamSynchronize(cpuStream);					\
+    hipStreamSynchronize(computeStream);			\
     auto err = hipGetLastError();				\
     if ( err != hipSuccess ) {					\
       printf("After hipDeviceSynchronize() : HIP error %s \n", hipGetErrorString( err )); \
@@ -443,7 +442,7 @@ inline void acceleratorMemSet(void *base,int value,size_t bytes) { hipMemset(bas
 
 inline void acceleratorCopyDeviceToDeviceAsynch(void *from,void *to,size_t bytes) // Asynch
 {
-  hipMemcpy(to,from,bytes, hipMemcpyDeviceToDevice);
+  hipMemcpyDtoDAsync(to,from,bytes, copyStream);
 }
 inline void acceleratorCopySynchronise(void) { hipStreamSynchronize(copyStream); };
 

Grid/util/Init.cc

@@ -356,6 +356,11 @@ void Grid_init(int *argc,char ***argv)
   //////////////////////////////////////////////////////////
   CartesianCommunicator::Init(argc,argv);
 
+  GridLogger::GlobalStopWatch.Stop();
+  CartesianCommunicator::BarrierWorld();
+  GridLogger::GlobalStopWatch.Reset();// Back to zero with synchronised clock
+  GridLogger::GlobalStopWatch.Start();
+
   ////////////////////////////////////
   // Banner after MPI (unless GPU)
   ////////////////////////////////////

HMC/Mobius2p1f_DD_RHMC_96I_mixed.cc

@@ -128,8 +128,14 @@ template<class FermionOperatorD, class FermionOperatorF, class SchurOperatorD, c
       ////////////////////////////////////////////////////////////////////////////////////
       // Make a mixed precision conjugate gradient
       ////////////////////////////////////////////////////////////////////////////////////
-      MixedPrecisionConjugateGradient<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations,MaxOuterIterations,SinglePrecGrid5,LinOpF,LinOpD);
+#if 1
+      RealD delta=1.e-4;
+      std::cout << GridLogMessage << "Calling reliable update Conjugate Gradient" <<std::endl;
+      ConjugateGradientReliableUpdate<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations*MaxOuterIterations,delta,SinglePrecGrid5,LinOpF,LinOpD);
+#else      
       std::cout << GridLogMessage << "Calling mixed precision Conjugate Gradient" <<std::endl;
+      MixedPrecisionConjugateGradient<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations,MaxOuterIterations,SinglePrecGrid5,LinOpF,LinOpD);
+#endif
       MPCG(src,psi);
     }
   };
@@ -141,6 +147,10 @@ int main(int argc, char **argv) {
   using namespace Grid;
 
   Grid_init(&argc, &argv);
+
+  CartesianCommunicator::BarrierWorld();
+  std::cout << GridLogMessage << " Clock skew check" <<std::endl;
+  
   int threads = GridThread::GetThreads();
 
    // Typedefs to simplify notation
@@ -161,7 +171,7 @@ int main(int argc, char **argv) {
   //  MD.name    = std::string("Force Gradient");
   typedef GenericHMCRunner<MinimumNorm2> HMCWrapper;
   MD.name    = std::string("MinimumNorm2");
-  MD.MDsteps =  4;
+  MD.MDsteps =  6;
   MD.trajL   = 1.0;
 
   HMCparameters HMCparams;
@@ -183,7 +193,7 @@ int main(int argc, char **argv) {
   CPparams.saveInterval  = 1;
   CPparams.format        = "IEEE64BIG";
   TheHMC.Resources.LoadNerscCheckpointer(CPparams);
-
+  std::cout << "loaded NERSC checpointer"<<std::endl;
   RNGModuleParameters RNGpar;
   RNGpar.serial_seeds = "1 2 3 4 5";
   RNGpar.parallel_seeds = "6 7 8 9 10";
@@ -204,7 +214,8 @@ int main(int argc, char **argv) {
   Real light_mass   = 7.8e-4;
   Real strange_mass = 0.02132;
   Real pv_mass      = 1.0;
-  std::vector<Real> hasenbusch({ light_mass, 3.8e-3, 0.0145, 0.045, 0.108, 0.25, 0.51 , pv_mass });
+  //  std::vector<Real> hasenbusch({ light_mass, 3.8e-3, 0.0145, 0.045, 0.108, 0.25, 0.51 , pv_mass });
+  std::vector<Real> hasenbusch({ light_mass, 5e-3, 0.0145, 0.045, 0.108, 0.25, 0.51 , pv_mass });
 
   // FIXME:
   // Same in MC and MD
@@ -287,6 +298,7 @@ int main(int argc, char **argv) {
   std::cout << GridLogMessage << " Running the HMC "<< std::endl;
   TheHMC.ReadCommandLine(argc,argv);  // params on CML or from param file
   TheHMC.initializeGaugeFieldAndRNGs(U);
+  std::cout << "loaded NERSC gauge field"<<std::endl;
 
 
   // These lines are unecessary if BC are all periodic

HMC/Mobius2p1f_DD_RHMC_96I_mixedmshift.cc

@@ -0,0 +1,474 @@
+/*************************************************************************************
+
+Grid physics library, www.github.com/paboyle/Grid
+
+Source file: ./tests/Test_hmc_EODWFRatio.cc
+
+Copyright (C) 2015-2016
+
+Author: Peter Boyle <pabobyle@ph.ed.ac.uk>
+Author: Guido Cossu <guido.cossu@ed.ac.uk>
+
+This program is free software; you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation; either version 2 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License along
+with this program; if not, write to the Free Software Foundation, Inc.,
+51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+See the full license in the file "LICENSE" in the top level distribution
+directory
+*************************************************************************************/
+/*  END LEGAL */
+#include <Grid/Grid.h>
+
+NAMESPACE_BEGIN(Grid);
+
+template<class FermionOperatorD, class FermionOperatorF, class SchurOperatorD, class  SchurOperatorF> 
+  class MixedPrecisionConjugateGradientOperatorFunction : public OperatorFunction<typename FermionOperatorD::FermionField> {
+  public:
+    typedef typename FermionOperatorD::FermionField FieldD;
+    typedef typename FermionOperatorF::FermionField FieldF;
+
+    using OperatorFunction<FieldD>::operator();
+
+    RealD   Tolerance;
+    RealD   InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed
+    Integer MaxInnerIterations;
+    Integer MaxOuterIterations;
+    GridBase* SinglePrecGrid4; //Grid for single-precision fields
+    GridBase* SinglePrecGrid5; //Grid for single-precision fields
+    RealD OuterLoopNormMult; //Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance
+
+    FermionOperatorF &FermOpF;
+    FermionOperatorD &FermOpD;;
+    SchurOperatorF &LinOpF;
+    SchurOperatorD &LinOpD;
+
+    Integer TotalInnerIterations; //Number of inner CG iterations
+    Integer TotalOuterIterations; //Number of restarts
+    Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step
+
+    MixedPrecisionConjugateGradientOperatorFunction(RealD tol, 
+						    Integer maxinnerit, 
+						    Integer maxouterit, 
+						    GridBase* _sp_grid4, 
+						    GridBase* _sp_grid5, 
+						    FermionOperatorF &_FermOpF,
+						    FermionOperatorD &_FermOpD,
+						    SchurOperatorF   &_LinOpF,
+						    SchurOperatorD   &_LinOpD): 
+      LinOpF(_LinOpF),
+      LinOpD(_LinOpD),
+      FermOpF(_FermOpF),
+      FermOpD(_FermOpD),
+      Tolerance(tol), 
+      InnerTolerance(tol), 
+      MaxInnerIterations(maxinnerit), 
+      MaxOuterIterations(maxouterit), 
+      SinglePrecGrid4(_sp_grid4),
+      SinglePrecGrid5(_sp_grid5),
+      OuterLoopNormMult(100.) 
+    { 
+      /* Debugging instances of objects; references are stored
+      std::cout << GridLogMessage << " Mixed precision CG wrapper LinOpF " <<std::hex<< &LinOpF<<std::dec <<std::endl;
+      std::cout << GridLogMessage << " Mixed precision CG wrapper LinOpD " <<std::hex<< &LinOpD<<std::dec <<std::endl;
+      std::cout << GridLogMessage << " Mixed precision CG wrapper FermOpF " <<std::hex<< &FermOpF<<std::dec <<std::endl;
+      std::cout << GridLogMessage << " Mixed precision CG wrapper FermOpD " <<std::hex<< &FermOpD<<std::dec <<std::endl;
+      */
+    };
+
+    void operator()(LinearOperatorBase<FieldD> &LinOpU, const FieldD &src, FieldD &psi) {
+
+      std::cout << GridLogMessage << " Mixed precision CG wrapper operator() "<<std::endl;
+
+      SchurOperatorD * SchurOpU = static_cast<SchurOperatorD *>(&LinOpU);
+      
+      //      std::cout << GridLogMessage << " Mixed precision CG wrapper operator() FermOpU " <<std::hex<< &(SchurOpU->_Mat)<<std::dec <<std::endl;
+      //      std::cout << GridLogMessage << " Mixed precision CG wrapper operator() FermOpD " <<std::hex<< &(LinOpD._Mat) <<std::dec <<std::endl;
+      // Assumption made in code to extract gauge field
+      // We could avoid storing LinopD reference alltogether ?
+      assert(&(SchurOpU->_Mat)==&(LinOpD._Mat));
+
+      ////////////////////////////////////////////////////////////////////////////////////
+      // Must snarf a single precision copy of the gauge field in Linop_d argument
+      ////////////////////////////////////////////////////////////////////////////////////
+      typedef typename FermionOperatorF::GaugeField GaugeFieldF;
+      typedef typename FermionOperatorF::GaugeLinkField GaugeLinkFieldF;
+      typedef typename FermionOperatorD::GaugeField GaugeFieldD;
+      typedef typename FermionOperatorD::GaugeLinkField GaugeLinkFieldD;
+
+      GridBase * GridPtrF = SinglePrecGrid4;
+      GridBase * GridPtrD = FermOpD.Umu.Grid();
+      GaugeFieldF     U_f  (GridPtrF);
+      GaugeLinkFieldF Umu_f(GridPtrF);
+      //      std::cout << " Dim gauge field "<<GridPtrF->Nd()<<std::endl; // 4d
+      //      std::cout << " Dim gauge field "<<GridPtrD->Nd()<<std::endl; // 4d
+
+      ////////////////////////////////////////////////////////////////////////////////////
+      // Moving this to a Clone method of fermion operator would allow to duplicate the 
+      // physics parameters and decrease gauge field copies
+      ////////////////////////////////////////////////////////////////////////////////////
+      GaugeLinkFieldD Umu_d(GridPtrD);
+      for(int mu=0;mu<Nd*2;mu++){ 
+	Umu_d = PeekIndex<LorentzIndex>(FermOpD.Umu, mu);
+	precisionChange(Umu_f,Umu_d);
+	PokeIndex<LorentzIndex>(FermOpF.Umu, Umu_f, mu);
+      }
+      pickCheckerboard(Even,FermOpF.UmuEven,FermOpF.Umu);
+      pickCheckerboard(Odd ,FermOpF.UmuOdd ,FermOpF.Umu);
+
+      ////////////////////////////////////////////////////////////////////////////////////
+      // Make a mixed precision conjugate gradient
+      ////////////////////////////////////////////////////////////////////////////////////
+#if 1
+      RealD delta=1.e-4;
+      std::cout << GridLogMessage << "Calling reliable update Conjugate Gradient" <<std::endl;
+      ConjugateGradientReliableUpdate<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations*MaxOuterIterations,delta,SinglePrecGrid5,LinOpF,LinOpD);
+#else      
+      std::cout << GridLogMessage << "Calling mixed precision Conjugate Gradient" <<std::endl;
+      MixedPrecisionConjugateGradient<FieldD,FieldF> MPCG(Tolerance,MaxInnerIterations,MaxOuterIterations,SinglePrecGrid5,LinOpF,LinOpD);
+#endif
+      MPCG(src,psi);
+    }
+  };
+
+NAMESPACE_END(Grid);
+
+
+int main(int argc, char **argv) {
+  using namespace Grid;
+
+  Grid_init(&argc, &argv);
+  int threads = GridThread::GetThreads();
+
+   // Typedefs to simplify notation
+  typedef WilsonImplR FermionImplPolicy;
+  typedef WilsonImplF FermionImplPolicyF;
+
+  typedef MobiusFermionR FermionAction;
+  typedef MobiusFermionF FermionActionF;
+  typedef typename FermionAction::FermionField FermionField;
+  typedef typename FermionActionF::FermionField FermionFieldF;
+
+  typedef Grid::XmlReader       Serialiser;
+
+  //::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
+  IntegratorParameters MD;
+  //  typedef GenericHMCRunner<LeapFrog> HMCWrapper;
+  //  MD.name    = std::string("Leap Frog");
+  //  typedef GenericHMCRunner<ForceGradient> HMCWrapper;
+  //  MD.name    = std::string("Force Gradient");
+  typedef GenericHMCRunner<MinimumNorm2> HMCWrapper;
+  MD.name    = std::string("MinimumNorm2");
+  MD.MDsteps =  6;
+  MD.trajL   = 1.0;
+
+  HMCparameters HMCparams;
+  HMCparams.StartTrajectory  = 1077;
+  HMCparams.Trajectories     = 1;
+  HMCparams.NoMetropolisUntil=  0;
+  // "[HotStart, ColdStart, TepidStart, CheckpointStart]\n";
+  //  HMCparams.StartingType     =std::string("ColdStart");
+  HMCparams.StartingType     =std::string("CheckpointStart");
+  HMCparams.MD = MD;
+  HMCWrapper TheHMC(HMCparams);
+
+  // Grid from the command line arguments --grid and --mpi
+  TheHMC.Resources.AddFourDimGrid("gauge"); // use default simd lanes decomposition
+
+  CheckpointerParameters CPparams;
+  CPparams.config_prefix = "ckpoint_DDHMC_lat";
+  CPparams.rng_prefix    = "ckpoint_DDHMC_rng";
+  CPparams.saveInterval  = 1;
+  CPparams.format        = "IEEE64BIG";
+  TheHMC.Resources.LoadNerscCheckpointer(CPparams);
+
+  RNGModuleParameters RNGpar;
+  RNGpar.serial_seeds = "1 2 3 4 5";
+  RNGpar.parallel_seeds = "6 7 8 9 10";
+  TheHMC.Resources.SetRNGSeeds(RNGpar);
+
+  // Construct observables
+  // here there is too much indirection
+  typedef PlaquetteMod<HMCWrapper::ImplPolicy> PlaqObs;
+  TheHMC.Resources.AddObservable<PlaqObs>();
+  //////////////////////////////////////////////
+
+  const int Ls      = 12;
+  RealD M5  = 1.8;
+  RealD b   = 1.5;
+  RealD c   = 0.5;
+  Real beta         = 2.31;
+  //  Real light_mass   = 5.4e-4;
+  Real light_mass   = 7.8e-4;
+  Real strange_mass = 0.02132;
+  Real pv_mass      = 1.0;
+  //  std::vector<Real> hasenbusch({ light_mass, 3.8e-3, 0.0145, 0.045, 0.108, 0.25, 0.51 , pv_mass });
+  std::vector<Real> hasenbusch({ light_mass, 5e-3, 0.0145, 0.045, 0.108, 0.25, 0.51 , pv_mass });
+
+  // FIXME:
+  // Same in MC and MD
+  // Need to mix precision too
+  OneFlavourRationalParams SFRp; // Strange
+  SFRp.lo       = 4.0e-3;
+  SFRp.hi       = 90.0;
+  SFRp.MaxIter  = 60000;
+  SFRp.tolerance= 1.0e-8;
+  SFRp.mdtolerance= 1.0e-6;
+  SFRp.degree   = 12;
+  SFRp.precision= 50;
+  SFRp.BoundsCheckFreq=0;
+
+  OneFlavourRationalParams OFRp; // Up/down
+  OFRp.lo       = 2.0e-5;
+  OFRp.hi       = 90.0;
+  OFRp.MaxIter  = 60000;
+  OFRp.tolerance= 1.0e-8;
+  OFRp.mdtolerance= 1.0e-6;
+  //  OFRp.degree   = 20; converges
+  //  OFRp.degree   = 16;
+  OFRp.degree   = 12;
+  OFRp.precision= 80;
+  OFRp.BoundsCheckFreq=0;
+
+  auto GridPtr   = TheHMC.Resources.GetCartesian();
+  auto GridRBPtr = TheHMC.Resources.GetRBCartesian();
+
+  typedef SchurDiagMooeeOperator<FermionActionF,FermionFieldF> LinearOperatorF;
+  typedef SchurDiagMooeeOperator<FermionAction ,FermionField > LinearOperatorD;
+  typedef MixedPrecisionConjugateGradientOperatorFunction<MobiusFermionD,MobiusFermionF,LinearOperatorD,LinearOperatorF> MxPCG;
+
+  ////////////////////////////////////////////////////////////////
+  // Domain decomposed
+  ////////////////////////////////////////////////////////////////
+  Coordinate latt4  = GridPtr->GlobalDimensions();
+  Coordinate mpi    = GridPtr->ProcessorGrid();
+  Coordinate shm;
+
+  GlobalSharedMemory::GetShmDims(mpi,shm);
+  
+  Coordinate CommDim(Nd);
+  for(int d=0;d<Nd;d++) CommDim[d]= (mpi[d]/shm[d])>1 ? 1 : 0;
+
+  Coordinate NonDirichlet(Nd+1,0);
+  Coordinate Dirichlet(Nd+1,0);
+  Dirichlet[1] = CommDim[0]*latt4[0]/mpi[0] * shm[0];
+  Dirichlet[2] = CommDim[1]*latt4[1]/mpi[1] * shm[1];
+  Dirichlet[3] = CommDim[2]*latt4[2]/mpi[2] * shm[2];
+  Dirichlet[4] = CommDim[3]*latt4[3]/mpi[3] * shm[3];
+
+  Coordinate Block4(Nd);
+  Block4[0] = Dirichlet[1];
+  Block4[1] = Dirichlet[2];
+  Block4[2] = Dirichlet[3];
+  Block4[3] = Dirichlet[4];
+
+  int Width=3;
+  TheHMC.Resources.SetMomentumFilter(new DDHMCFilter<WilsonImplR::Field>(Block4,Width));
+
+  //////////////////////////
+  // Fermion Grids
+  //////////////////////////
+  auto FGrid     = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtr);
+  auto FrbGrid   = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtr);
+
+  Coordinate simdF = GridDefaultSimd(Nd,vComplexF::Nsimd());
+  auto GridPtrF   = SpaceTimeGrid::makeFourDimGrid(latt4,simdF,mpi);
+  auto GridRBPtrF = SpaceTimeGrid::makeFourDimRedBlackGrid(GridPtrF);
+  auto FGridF     = SpaceTimeGrid::makeFiveDimGrid(Ls,GridPtrF);
+  auto FrbGridF   = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,GridPtrF);
+
+  IwasakiGaugeActionR GaugeAction(beta);
+
+  // temporarily need a gauge field
+  LatticeGaugeField U(GridPtr);
+  LatticeGaugeFieldF UF(GridPtrF);
+
+  std::cout << GridLogMessage << " Running the HMC "<< std::endl;
+  TheHMC.ReadCommandLine(argc,argv);  // params on CML or from param file
+  TheHMC.initializeGaugeFieldAndRNGs(U);
+
+
+  // These lines are unecessary if BC are all periodic
+  std::vector<Complex> boundary = {1,1,1,-1};
+  FermionAction::ImplParams Params(boundary);
+  Params.dirichlet=NonDirichlet;
+  FermionAction::ImplParams ParamsDir(boundary);
+  ParamsDir.dirichlet=Dirichlet;
+
+  //  double StoppingCondition = 1e-14;
+  //  double MDStoppingCondition = 1e-9;
+  double StoppingCondition = 1e-10;
+  double MDStoppingCondition = 1e-7;
+  double MDStoppingConditionLoose = 1e-6;
+  double MaxCGIterations = 300000;
+  ConjugateGradient<FermionField>  CG(StoppingCondition,MaxCGIterations);
+  ConjugateGradient<FermionField>  MDCG(MDStoppingCondition,MaxCGIterations);
+
+  ////////////////////////////////////
+  // Collect actions
+  ////////////////////////////////////
+  ActionLevel<HMCWrapper::Field> Level1(1);
+  ActionLevel<HMCWrapper::Field> Level2(4);
+  ActionLevel<HMCWrapper::Field> Level3(8);
+
+  ////////////////////////////////////
+  // Strange action
+  ////////////////////////////////////
+  FermionAction StrangeOp (U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,strange_mass,M5,b,c, Params);
+  FermionAction StrangePauliVillarsOp(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,pv_mass,  M5,b,c, Params);
+
+  FermionAction StrangeOpDir (U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,strange_mass,M5,b,c, ParamsDir);
+  FermionAction StrangePauliVillarsOpDir(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,pv_mass,  M5,b,c, ParamsDir);
+  
+  OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermionBdy(StrangeOpDir,StrangeOp,SFRp);
+  OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermionLocal(StrangePauliVillarsOpDir,StrangeOpDir,SFRp);
+  OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> StrangePseudoFermionPVBdy(StrangePauliVillarsOp,StrangePauliVillarsOpDir,SFRp);
+  Level1.push_back(&StrangePseudoFermionBdy); // ok
+  Level2.push_back(&StrangePseudoFermionLocal);
+  Level1.push_back(&StrangePseudoFermionPVBdy); //ok
+
+  ////////////////////////////////////
+  // up down action
+  ////////////////////////////////////
+  std::vector<Real> light_den;
+  std::vector<Real> light_num;
+  std::vector<int> dirichlet_den;
+  std::vector<int> dirichlet_num;
+
+  int n_hasenbusch = hasenbusch.size();
+  light_den.push_back(light_mass);  dirichlet_den.push_back(0);
+  for(int h=0;h<n_hasenbusch;h++){
+    light_den.push_back(hasenbusch[h]); dirichlet_den.push_back(1);
+  }
+
+  for(int h=0;h<n_hasenbusch;h++){
+    light_num.push_back(hasenbusch[h]); dirichlet_num.push_back(1);
+  }
+  light_num.push_back(pv_mass);  dirichlet_num.push_back(0);
+
+  std::vector<FermionAction *> Numerators;
+  std::vector<FermionActionF *> NumeratorsF;
+  std::vector<FermionAction *> Denominators;
+  std::vector<FermionActionF *> DenominatorsF;
+  std::vector<TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy> *> Quotients;
+
+#define MIXED_PRECISION
+#ifdef MIXED_PRECISION
+  std::vector<OneFlavourEvenOddRatioRationalMixedPrecPseudoFermionAction<FermionImplPolicy,FermionImplPolicyF> *> Bdys;
+#else
+  std::vector<OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy> *> Bdys;
+#endif
+  std::vector<MxPCG *> ActionMPCG;
+  std::vector<MxPCG *> MPCG;
+
+  typedef SchurDiagMooeeOperator<FermionActionF,FermionFieldF> LinearOperatorF;
+  typedef SchurDiagMooeeOperator<FermionAction ,FermionField > LinearOperatorD;
+  std::vector<LinearOperatorD *> LinOpD;
+  std::vector<LinearOperatorF *> LinOpF; 
+  
+  for(int h=0;h<n_hasenbusch+1;h++){
+    std::cout << GridLogMessage
+	      << " 2f quotient Action ";
+    std::cout << "det D("<<light_den[h]<<")";
+    if ( dirichlet_den[h] ) std::cout << "^dirichlet    ";
+    std::cout << "/ det D("<<light_num[h]<<")";
+    if ( dirichlet_num[h] ) std::cout << "^dirichlet    ";
+    std::cout << std::endl;
+
+    FermionAction::ImplParams ParamsNum(boundary);
+    FermionAction::ImplParams ParamsDen(boundary);
+    FermionActionF::ImplParams ParamsNumF(boundary);
+    FermionActionF::ImplParams ParamsDenF(boundary);
+    
+    if ( dirichlet_num[h]==1) ParamsNum.dirichlet = Dirichlet;
+    else                      ParamsNum.dirichlet = NonDirichlet;
+    Numerators.push_back  (new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_num[h],M5,b,c, ParamsNum));
+
+    if ( dirichlet_den[h]==1) ParamsDen.dirichlet = Dirichlet;
+    else                      ParamsDen.dirichlet = NonDirichlet;
+
+    Denominators.push_back(new FermionAction(U,*FGrid,*FrbGrid,*GridPtr,*GridRBPtr,light_den[h],M5,b,c, ParamsDen));
+
+    ParamsDenF.dirichlet = ParamsDen.dirichlet;
+    DenominatorsF.push_back(new FermionActionF(UF,*FGridF,*FrbGridF,*GridPtrF,*GridRBPtrF,light_den[h],M5,b,c, ParamsDenF));
+
+    ParamsNumF.dirichlet = ParamsNum.dirichlet;
+    NumeratorsF.push_back  (new FermionActionF(UF,*FGridF,*FrbGridF,*GridPtrF,*GridRBPtrF,light_num[h],M5,b,c, ParamsNumF));
+
+    LinOpD.push_back(new LinearOperatorD(*Denominators[h]));
+    LinOpF.push_back(new LinearOperatorF(*DenominatorsF[h]));
+
+    double conv  = MDStoppingCondition;
+    if (h<3) conv= MDStoppingConditionLoose; // Relax on first two hasenbusch factors
+    const int MX_inner = 5000;
+    MPCG.push_back(new MxPCG(conv,
+			     MX_inner,
+			     MaxCGIterations,
+			     GridPtrF,
+			     FrbGridF,
+			     *DenominatorsF[h],*Denominators[h],
+			     *LinOpF[h], *LinOpD[h]) );
+
+    ActionMPCG.push_back(new MxPCG(StoppingCondition,
+				   MX_inner,
+				   MaxCGIterations,
+				   GridPtrF,
+				   FrbGridF,
+				   *DenominatorsF[h],*Denominators[h],
+				   *LinOpF[h], *LinOpD[h]) );
+
+    
+    if(h!=0) {
+      //      Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],MDCG,CG));
+      Quotients.push_back (new TwoFlavourEvenOddRatioPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],*MPCG[h],*ActionMPCG[h],CG));
+    } else {
+#ifdef MIXED_PRECISION
+      Bdys.push_back( new OneFlavourEvenOddRatioRationalMixedPrecPseudoFermionAction<FermionImplPolicy,FermionImplPolicyF>(
+			   *Numerators[h],*Denominators[h],
+			   *NumeratorsF[h],*DenominatorsF[h],
+			   OFRp, 500) );
+      Bdys.push_back( new OneFlavourEvenOddRatioRationalMixedPrecPseudoFermionAction<FermionImplPolicy,FermionImplPolicyF>(
+			   *Numerators[h],*Denominators[h],
+			   *NumeratorsF[h],*DenominatorsF[h],
+			   OFRp, 500) );
+#else
+      Bdys.push_back( new OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],OFRp));
+      Bdys.push_back( new OneFlavourEvenOddRatioRationalPseudoFermionAction<FermionImplPolicy>(*Numerators[h],*Denominators[h],OFRp));
+#endif
+    }
+  }
+
+  int nquo=Quotients.size();
+  Level1.push_back(Bdys[0]);
+  Level1.push_back(Bdys[1]);
+  for(int h=0;h<nquo-1;h++){
+    Level2.push_back(Quotients[h]);
+  }
+  Level2.push_back(Quotients[nquo-1]);
+
+  /////////////////////////////////////////////////////////////
+  // Gauge action
+  /////////////////////////////////////////////////////////////
+  Level3.push_back(&GaugeAction);
+  TheHMC.TheAction.push_back(Level1);
+  TheHMC.TheAction.push_back(Level2);
+  TheHMC.TheAction.push_back(Level3);
+  std::cout << GridLogMessage << " Action complete "<< std::endl;
+  /////////////////////////////////////////////////////////////
+
+  TheHMC.Run();  // no smearing
+
+  Grid_finalize();
+} // main
+
+
+

benchmarks/Benchmark_ITT.cc

@@ -420,7 +420,6 @@ public:
 	FGrid->Broadcast(0,&ncall,sizeof(ncall));
 
 	//	std::cout << GridLogMessage << " Estimate " << ncall << " calls per second"<<std::endl;
-	Dw.ZeroCounters();
 
 	time_statistics timestat;
 	std::vector<double> t_time(ncall);
@@ -589,7 +588,6 @@ public:
 	FGrid->Broadcast(0,&ncall,sizeof(ncall));
 
 	//	std::cout << GridLogMessage << " Estimate " << ncall << " calls per second"<<std::endl;
-	Ds.ZeroCounters();
 
 	time_statistics timestat;
 	std::vector<double> t_time(ncall);

benchmarks/Benchmark_dwf.cc

@@ -186,7 +186,6 @@ int main (int argc, char ** argv)
 
   if (1) {
     FGrid->Barrier();
-    Dw.ZeroCounters();
     Dw.Dhop(src,result,0);
     std::cout<<GridLogMessage<<"Called warmup"<<std::endl;
     double t0=usecond();
@@ -231,7 +230,6 @@ int main (int argc, char ** argv)
       exit(-1);
     }
     assert (norm2(err)< 1.0e-4 );
-    Dw.Report();
   }
 
   if (1)
@@ -306,7 +304,6 @@ int main (int argc, char ** argv)
   if ( WilsonKernelsStatic::Opt == WilsonKernelsStatic::OptInlineAsm ) std::cout << GridLogMessage<< "* Using Asm Nc=3   WilsonKernels" <<std::endl;
   std::cout << GridLogMessage<< "*********************************************************" <<std::endl;
   {
-    Dw.ZeroCounters();
     FGrid->Barrier();
     Dw.DhopEO(src_o,r_e,DaggerNo);
     double t0=usecond();
@@ -328,7 +325,6 @@ int main (int argc, char ** argv)
     std::cout<<GridLogMessage << "Deo mflop/s =   "<< flops/(t1-t0)<<std::endl;
     std::cout<<GridLogMessage << "Deo mflop/s per rank   "<< flops/(t1-t0)/NP<<std::endl;
     std::cout<<GridLogMessage << "Deo mflop/s per node   "<< flops/(t1-t0)/NN<<std::endl;
-    Dw.Report();
   }
   Dw.DhopEO(src_o,r_e,DaggerNo);
   Dw.DhopOE(src_e,r_o,DaggerNo);

benchmarks/Benchmark_gparity.cc

@@ -93,14 +93,11 @@ int main (int argc, char ** argv)
   int ncall =1000;
   if (1) {
     FGrid->Barrier();
-    Dw.ZeroCounters();
     Dw.Dhop(src,result,0);
     std::cout<<GridLogMessage<<"Called warmup"<<std::endl;
     double t0=usecond();
     for(int i=0;i<ncall;i++){
-      __SSC_START;
       Dw.Dhop(src,result,0);
-      __SSC_STOP;
     }
     double t1=usecond();
     FGrid->Barrier();
@@ -114,7 +111,6 @@ int main (int argc, char ** argv)
     std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;
     std::cout<<GridLogMessage << "mflop/s per rank =  "<< flops/(t1-t0)/NP<<std::endl;
     std::cout<<GridLogMessage << "mflop/s per node =  "<< flops/(t1-t0)/NN<<std::endl;
-    Dw.Report();
   }
 
 
@@ -136,14 +132,11 @@ int main (int argc, char ** argv)
   GparityDomainWallFermionD DwD(Umu_d,*FGrid_d,*FrbGrid_d,*UGrid_d,*UrbGrid_d,mass,M5);
   if (1) {
     FGrid_d->Barrier();
-    DwD.ZeroCounters();
     DwD.Dhop(src_d,result_d,0);
     std::cout<<GridLogMessage<<"Called warmup"<<std::endl;
     double t0=usecond();
     for(int i=0;i<ncall;i++){
-      __SSC_START;
       DwD.Dhop(src_d,result_d,0);
-      __SSC_STOP;
     }
     double t1=usecond();
     FGrid_d->Barrier();
@@ -157,7 +150,6 @@ int main (int argc, char ** argv)
     std::cout<<GridLogMessage << "mflop/s =   "<< flops/(t1-t0)<<std::endl;
     std::cout<<GridLogMessage << "mflop/s per rank =  "<< flops/(t1-t0)/NP<<std::endl;
     std::cout<<GridLogMessage << "mflop/s per node =  "<< flops/(t1-t0)/NN<<std::endl;
-    DwD.Report();
   }
 #endif
   Grid_finalize();

benchmarks/Benchmark_mooee.cc

@@ -103,35 +103,30 @@ int main (int argc, char ** argv)
 #define BENCH_DW(A,...)			\
     Dw. A (__VA_ARGS__);				\
     FGrid->Barrier();				\
-    Dw.CayleyZeroCounters();      \
     t0=usecond();				\
     for(int i=0;i<ncall;i++){			\
       Dw. A (__VA_ARGS__);				\
     }						\
     t1=usecond();				\
     FGrid->Barrier();				\
-    Dw.CayleyReport();					\
     std::cout<<GridLogMessage << "Called " #A " "<< (t1-t0)/ncall<<" us"<<std::endl;\
     std::cout<<GridLogMessage << "******************"<<std::endl;
 
 #define BENCH_ZDW(A,in,out)			\
     zDw. A (in,out);				\
     FGrid->Barrier();				\
-    zDw.CayleyZeroCounters();      \
     t0=usecond();				\
     for(int i=0;i<ncall;i++){			\
       zDw. A (in,out);				\
     }						\
     t1=usecond();				\
     FGrid->Barrier();				\
-    zDw.CayleyReport();							\
     std::cout<<GridLogMessage << "Called ZDw " #A " "<< (t1-t0)/ncall<<" us"<<std::endl;\
     std::cout<<GridLogMessage << "******************"<<std::endl;
 
 #define BENCH_DW_SSC(A,in,out)			\
     Dw. A (in,out);				\
     FGrid->Barrier();				\
-    Dw.CayleyZeroCounters();      \
     t0=usecond();				\
     for(int i=0;i<ncall;i++){			\
       __SSC_START ;				\
@@ -140,7 +135,6 @@ int main (int argc, char ** argv)
     }						\
     t1=usecond();				\
     FGrid->Barrier();				\
-    Dw.CayleyReport();					\
     std::cout<<GridLogMessage << "Called " #A " "<< (t1-t0)/ncall<<" us"<<std::endl;\
     std::cout<<GridLogMessage << "******************"<<std::endl;
 

benchmarks/Benchmark_wilson.cc

@@ -155,7 +155,6 @@ int main (int argc, char ** argv)
   //int ncall=1;
 
   // Counters
-  Dw.ZeroCounters();
   Grid.Barrier();
 
   double t0=usecond();
@@ -201,7 +200,6 @@ int main (int argc, char ** argv)
   err = ref-result;
   std::cout<<GridLogMessage << "norm diff   "<< norm2(err)<<std::endl;
 
-  Dw.Report();
   
   // guard
   double err0 = norm2(err);

configure.ac

@@ -128,6 +128,26 @@ case ${ac_LAPACK} in
         AC_DEFINE([USE_LAPACK],[1],[use LAPACK]);;
 esac
 
+############### tracing
+AC_ARG_ENABLE([tracing],
+    [AC_HELP_STRING([--enable-tracing=none|nvtx|roctx|timer], [enable tracing])],
+    [ac_TRACING=${enable_tracing}], [ac_TRACING=none])
+
+case ${ac_TRACING} in
+    nvtx)
+        AC_DEFINE([GRID_TRACING_NVTX],[1],[use NVTX])
+	LIBS="${LIBS} -lnvToolsExt64_1"
+	;;
+    roctx)
+        AC_DEFINE([GRID_TRACING_ROCTX],[1],[use ROCTX])
+	LIBS="${LIBS} -lroctx64"
+	;;
+    timer)
+        AC_DEFINE([GRID_TRACING_TIMER],[1],[use TIMER]);;
+    *)
+	AC_DEFINE([GRID_TRACING_NONE],[1],[no tracing]);;
+esac
+
 ############### fermions
 AC_ARG_ENABLE([fermion-reps],
      [AC_HELP_STRING([--enable-fermion-reps=yes|no], [enable extra fermion representation support])],

examples/Example_christoph.cc

@@ -0,0 +1,436 @@
+/*
+ * Warning: This code illustrative only: not well tested, and not meant for production use
+ * without regression / tests being applied
+ */
+
+#include <Grid/Grid.h>
+
+using namespace std;
+using namespace Grid;
+
+RealD LLscale =1.0;
+RealD LCscale =1.0;
+
+template<class Gimpl,class Field> class CovariantLaplacianCshift : public SparseMatrixBase<Field>
+{
+public:
+  INHERIT_GIMPL_TYPES(Gimpl);
+
+  GridBase *grid;
+  GaugeField U;
+  
+  CovariantLaplacianCshift(GaugeField &_U)    :
+    grid(_U.Grid()),
+    U(_U) {  };
+
+  virtual GridBase *Grid(void) { return grid; };
+
+  virtual void  M    (const Field &in, Field &out)
+  {
+    out=Zero();
+    for(int mu=0;mu<Nd-1;mu++) {
+      GaugeLinkField Umu = PeekIndex<LorentzIndex>(U, mu); // NB: Inefficent
+      out = out - Gimpl::CovShiftForward(Umu,mu,in);    
+      out = out - Gimpl::CovShiftBackward(Umu,mu,in);    
+      out = out + 2.0*in;
+    }
+  };
+  virtual void  Mdag (const Field &in, Field &out) { M(in,out);}; // Laplacian is hermitian
+  virtual  void Mdiag    (const Field &in, Field &out)                  {assert(0);}; // Unimplemented need only for multigrid
+  virtual  void Mdir     (const Field &in, Field &out,int dir, int disp){assert(0);}; // Unimplemented need only for multigrid
+  virtual  void MdirAll  (const Field &in, std::vector<Field> &out)     {assert(0);}; // Unimplemented need only for multigrid
+};
+
+void MakePhase(Coordinate mom,LatticeComplex &phase)
+{
+  GridBase *grid = phase.Grid();
+  auto latt_size = grid->GlobalDimensions();
+  ComplexD ci(0.0,1.0);
+  phase=Zero();
+
+  LatticeComplex coor(phase.Grid());
+  for(int mu=0;mu<Nd;mu++){
+    RealD TwoPiL =  M_PI * 2.0/ latt_size[mu];
+    LatticeCoordinate(coor,mu);
+    phase = phase + (TwoPiL * mom[mu]) * coor;
+  }
+  phase = exp(phase*ci);
+}
+
+void PointSource(Coordinate &coor,LatticePropagator &source)
+{
+  //  Coordinate coor({0,0,0,0});
+  source=Zero();
+  SpinColourMatrix kronecker; kronecker=1.0;
+  pokeSite(kronecker,source,coor);
+}
+void Z2WallSource(GridParallelRNG &RNG,int tslice,LatticePropagator &source)
+{
+  GridBase *grid = source.Grid();
+  LatticeComplex noise(grid);
+  LatticeComplex zz(grid); zz=Zero();
+  LatticeInteger t(grid);
+
+  RealD nrm=1.0/sqrt(2);
+  bernoulli(RNG, noise); // 0,1 50:50
+
+  noise = (2.*noise - Complex(1,1))*nrm;
+
+  LatticeCoordinate(t,Tdir);
+  noise = where(t==Integer(tslice), noise, zz);
+
+  source = 1.0;
+  source = source*noise;
+  std::cout << " Z2 wall " << norm2(source) << std::endl;
+}
+template<class Field>
+void GaussianSmear(LatticeGaugeField &U,Field &unsmeared,Field &smeared)
+{
+  typedef CovariantLaplacianCshift <PeriodicGimplR,Field> Laplacian_t;
+  Laplacian_t Laplacian(U);
+
+  Integer Iterations = 40;
+  Real width = 2.0;
+  Real coeff = (width*width) / Real(4*Iterations);
+
+  Field tmp(U.Grid());
+  smeared=unsmeared;
+  //  chi = (1-p^2/2N)^N kronecker
+  for(int n = 0; n < Iterations; ++n) {
+    Laplacian.M(smeared,tmp);
+    smeared = smeared - coeff*tmp;
+    std::cout << " smear iter " << n<<" " <<norm2(smeared)<<std::endl;
+  }
+}
+void GaussianSource(Coordinate &site,LatticeGaugeField &U,LatticePropagator &source)
+{
+  LatticePropagator tmp(source.Grid());
+  PointSource(site,source);
+  std::cout << " GaussianSource Kronecker "<< norm2(source)<<std::endl;
+  tmp = source;
+  GaussianSmear(U,tmp,source);
+  std::cout << " GaussianSource Smeared "<< norm2(source)<<std::endl;
+}
+void GaussianWallSource(GridParallelRNG &RNG,int tslice,LatticeGaugeField &U,LatticePropagator &source)
+{
+  Z2WallSource(RNG,tslice,source);
+  auto tmp = source;
+  GaussianSmear(U,tmp,source);
+}
+void SequentialSource(int tslice,Coordinate &mom,LatticePropagator &spectator,LatticePropagator &source)
+{
+  assert(mom.size()==Nd);
+  assert(mom[Tdir] == 0);
+
+  GridBase * grid = spectator.Grid();
+
+
+  LatticeInteger ts(grid);
+  LatticeCoordinate(ts,Tdir);
+  source = Zero();
+  source = where(ts==Integer(tslice),spectator,source); // Stick in a slice of the spectator, zero everywhere else
+
+  LatticeComplex phase(grid);
+  MakePhase(mom,phase);
+
+  source = source *phase;
+}
+
+template<class Action>
+void MasslessFreePropagator(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{			   
+ GridBase *UGrid = source.Grid();
+  GridBase *FGrid = D.FermionGrid();
+  bool fiveD = true; //calculate 5d free propagator
+  RealD mass = D.Mass();
+  LatticeFermion src4  (UGrid);
+  LatticeFermion result4  (UGrid);
+  LatticeFermion result5(FGrid);
+  LatticeFermion src5(FGrid);
+  LatticePropagator prop5(FGrid);
+  for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+ 
+      PropToFerm<Action>(src4,source,s,c);
+
+      D.ImportPhysicalFermionSource(src4,src5);
+      D.FreePropagator(src5,result5,mass,true);
+      std::cout<<GridLogMessage
+               <<"Free 5D prop spin "<<s<<" color "<<c
+               <<" norm2(src5d) "   <<norm2(src5)
+               <<" norm2(result5d) "<<norm2(result5)<<std::endl;
+
+      D.ExportPhysicalFermionSolution(result5,result4);
+
+      FermToProp<Action>(prop5,result5,s,c);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+
+  LatticePropagator Vector_mu(UGrid);
+  LatticeComplex    VV (UGrid);
+  std::vector<TComplex> sumVV;
+  Gamma::Algebra GammaV[3] = {
+    Gamma::Algebra::GammaX,
+    Gamma::Algebra::GammaY,
+    Gamma::Algebra::GammaZ
+  };
+  for( int mu=0;mu<3;mu++ ) {
+    Gamma gV(GammaV[mu]);
+    D.ContractConservedCurrent(prop5,prop5,Vector_mu,source,Current::Vector,mu);
+    VV       = trace(gV*Vector_mu);     // (local) Vector-Vector conserved current
+    sliceSum(VV,sumVV,Tdir);
+    int Nt = sumVV.size();
+    for(int t=0;t<Nt;t++){
+      RealD Ct = real(TensorRemove(sumVV[t]))*LCscale;
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout<<GridLogMessage <<"VVc["<<mu<<"]["<<t<<"] "<< Ct
+               << " 2 pi^2 t^3 C(t) "<< Ct/Cont << " delta Ct "<< Ct-Cont <<std::endl;
+    }
+  }
+}
+template<class Action>
+void MasslessFreePropagator1(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{			   
+  bool fiveD = false; //calculate 4d free propagator
+  RealD mass = D.Mass();
+  GridBase *UGrid = source.Grid();
+  LatticeFermion src4  (UGrid); 
+  LatticeFermion result4  (UGrid); 
+  for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+      PropToFerm<Action>(src4,source,s,c);
+      D.FreePropagator(src4,result4,mass,false);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+}
+
+template<class Action>
+void Solve(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{
+  GridBase *UGrid = D.GaugeGrid();
+  GridBase *FGrid = D.FermionGrid();
+
+  LatticeFermion src4  (UGrid); 
+  LatticeFermion src5  (FGrid); 
+  LatticeFermion result5(FGrid);
+  LatticeFermion result4(UGrid);
+  LatticePropagator prop5(FGrid);
+  
+  ConjugateGradient<LatticeFermion> CG(1.0e-7,100000);
+  SchurRedBlackDiagMooeeSolve<LatticeFermion> schur(CG);
+  ZeroGuesser<LatticeFermion> ZG; // Could be a DeflatedGuesser if have eigenvectors
+   for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+      PropToFerm<Action>(src4,source,s,c);
+
+      D.ImportPhysicalFermionSource(src4,src5);
+
+      result5=Zero();
+      schur(D,src5,result5,ZG);
+      std::cout<<GridLogMessage
+	       <<"spin "<<s<<" color "<<c
+	       <<" norm2(src5d) "   <<norm2(src5)
+               <<" norm2(result5d) "<<norm2(result5)<<std::endl;
+
+      D.ExportPhysicalFermionSolution(result5,result4);
+
+      FermToProp<Action>(prop5,result5,s,c);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+  LatticePropagator Axial_mu(UGrid); 
+  LatticePropagator Vector_mu(UGrid); 
+
+  LatticeComplex    PA (UGrid); 
+  LatticeComplex    VV (UGrid); 
+  LatticeComplex    PJ5q(UGrid);
+  LatticeComplex    PP (UGrid);
+
+  std::vector<TComplex> sumPA;
+  std::vector<TComplex> sumVV;
+  std::vector<TComplex> sumPP;
+  std::vector<TComplex> sumPJ5q;
+
+  Gamma g5(Gamma::Algebra::Gamma5);
+  D.ContractConservedCurrent(prop5,prop5,Axial_mu,source,Current::Axial,Tdir);
+  PA       = trace(g5*Axial_mu);      // Pseudoscalar-Axial conserved current
+  sliceSum(PA,sumPA,Tdir);
+
+  int Nt{static_cast<int>(sumPA.size())};
+
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PAc["<<t<<"] "<<real(TensorRemove(sumPA[t]))*LCscale<<std::endl;
+
+  PP       = trace(adj(propagator)*propagator); // Pseudoscalar density
+  sliceSum(PP,sumPP,Tdir);
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PP["<<t<<"] "<<real(TensorRemove(sumPP[t]))*LCscale<<std::endl;
+  
+  D.ContractJ5q(prop5,PJ5q);
+  sliceSum(PJ5q,sumPJ5q,Tdir);
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PJ5q["<<t<<"] "<<real(TensorRemove(sumPJ5q[t]))<<std::endl;
+
+  Gamma::Algebra GammaV[3] = {
+    Gamma::Algebra::GammaX,
+    Gamma::Algebra::GammaY,
+    Gamma::Algebra::GammaZ
+  };
+  for( int mu=0;mu<3;mu++ ) {
+    Gamma gV(GammaV[mu]);
+    D.ContractConservedCurrent(prop5,prop5,Vector_mu,source,Current::Vector,mu);
+    //    auto ss=sliceSum(Vector_mu,Tdir);
+    //    for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"ss["<<mu<<"]["<<t<<"] "<<ss[t]<<std::endl;
+    VV       = trace(gV*Vector_mu);     // (local) Vector-Vector conserved current
+    sliceSum(VV,sumVV,Tdir);
+    for(int t=0;t<Nt;t++){
+      RealD Ct = real(TensorRemove(sumVV[t]))*LCscale;
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout<<GridLogMessage <<"VVc["<<mu<<"]["<<t<<"] "<< Ct
+               << " 2 pi^2 t^3 C(t) "<< Ct/Cont << " delta Ct "<< Ct-Cont <<std::endl;
+    }
+  }
+
+}
+
+class MesonFile: Serializable {
+public:
+  GRID_SERIALIZABLE_CLASS_MEMBERS(MesonFile, std::vector<std::vector<Complex> >, data);
+};
+
+void MesonTrace(std::string file,LatticePropagator &q1,LatticePropagator &q2,LatticeComplex &phase)
+{
+  const int nchannel=4;
+  Gamma::Algebra Gammas[nchannel][2] = {
+    {Gamma::Algebra::GammaXGamma5,Gamma::Algebra::GammaXGamma5},
+    {Gamma::Algebra::GammaYGamma5,Gamma::Algebra::GammaYGamma5},
+    {Gamma::Algebra::GammaZGamma5,Gamma::Algebra::GammaZGamma5},
+    {Gamma::Algebra::Identity,Gamma::Algebra::Identity}
+  };
+
+  LatticeComplex meson_CF(q1.Grid());
+  MesonFile MF;
+
+  for(int ch=0;ch<nchannel;ch++){
+
+    Gamma Gsrc(Gammas[ch][0]);
+    Gamma Gsnk(Gammas[ch][1]);
+
+    meson_CF = trace(adj(q1)*Gsnk*q2*adj(Gsrc));
+
+    std::vector<TComplex> meson_T;
+    sliceSum(meson_CF,meson_T, Tdir);
+
+    int nt=meson_T.size();
+
+    std::vector<Complex> corr(nt);
+    for(int t=0;t<nt;t++){
+      corr[t] = TensorRemove(meson_T[t])*LLscale; // Yes this is ugly, not figured a work around
+      RealD Ct = real(corr[t]);
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout << " channel "<<ch<<" t "<<t<<" " <<real(corr[t])<< " 2 pi^2 t^3 C(t) "<< 2 * M_PI *M_PI * t*t*t * Ct
+		<< " deltaC " <<Ct-Cont<<std::endl;
+    }
+    MF.data.push_back(corr);
+  }
+
+  {
+    XmlWriter WR(file);
+    write(WR,"MesonFile",MF);
+  }
+}
+
+int main (int argc, char ** argv)
+{
+
+  Grid_init(&argc,&argv);
+  int Ls= atoi(getenv("Ls"));
+
+  // Double precision grids
+  GridCartesian         * UGrid   = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(), 
+								   GridDefaultSimd(Nd,vComplex::Nsimd()),
+								   GridDefaultMpi());
+  GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
+  GridCartesian         * FGrid   = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
+  GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
+
+  //////////////////////////////////////////////////////////////////////
+  // You can manage seeds however you like.
+  // Recommend SeedUniqueString.
+  //////////////////////////////////////////////////////////////////////
+  //  std::vector<int> seeds4({1,2,3,4}); 
+  //  GridParallelRNG          RNG4(UGrid);  RNG4.SeedFixedIntegers(seeds4);
+
+  LatticeGaugeField Umu(UGrid);
+  std::string config;
+  RealD M5=atof(getenv("M5"));
+  RealD mq = atof(getenv("mass"));
+  int   point_x = atoi(getenv("point_x"));
+  int   point_y = atoi(getenv("point_y"));
+  int   point_z = atoi(getenv("point_z"));
+  int   point_t = atoi(getenv("point_t"));
+  std::vector<RealD> masses({ mq} ); // u/d, s, c ??
+  if( argc > 1 && argv[1][0] != '-' )
+  {
+    std::cout<<GridLogMessage <<"Loading configuration from "<<argv[1]<<std::endl;
+    FieldMetaData header;
+    NerscIO::readConfiguration(Umu, header, argv[1]);
+    config=argv[1];
+    LLscale = 1.0;
+    LCscale = 1.0;
+  } else {
+    printf("Expected a configuration");
+    exit(0);
+  }
+
+  int nmass = masses.size();
+
+  typedef MobiusFermionR FermionActionR;
+  std::vector<FermionActionR *> FermActs;
+  
+  std::cout<<GridLogMessage <<"======================"<<std::endl;
+  std::cout<<GridLogMessage <<"DomainWallFermion action"<<std::endl;
+  std::cout<<GridLogMessage <<"======================"<<std::endl;
+
+  for(auto mass: masses) {
+    std::vector<Complex> boundary = {1,1,1,-1};
+    FermionActionR::ImplParams Params(boundary);
+    RealD b=1.5;
+    RealD c=0.5;
+    FermActs.push_back(new FermionActionR(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5,b,c));
+  }
+
+  LatticePropagator point_source(UGrid);
+
+  Coordinate Origin({point_x,point_y,point_z,point_t});
+  PointSource   (Origin,point_source);
+  
+  std::vector<LatticePropagator> PointProps(nmass,UGrid);
+
+  for(int m=0;m<nmass;m++) {
+    Solve(*FermActs[m],point_source   ,PointProps[m]);
+  }
+
+  LatticeComplex phase(UGrid);
+  Coordinate mom({0,0,0,0});
+  MakePhase(mom,phase);
+  
+  for(int m1=0 ;m1<nmass;m1++) {
+  for(int m2=m1;m2<nmass;m2++) {
+    std::stringstream ssp,ssg,ssz;
+
+    ssp<<config<< "_m" << m1 << "_m"<< m2 << "_point_meson.xml";
+    ssz<<config<< "_m" << m1 << "_m"<< m2 << "_free_meson.xml";
+
+    std::cout << "CG determined VV correlation function"<<std::endl;
+    MesonTrace(ssp.str(),PointProps[m1],PointProps[m2],phase);
+    
+  }}
+
+  Grid_finalize();
+}
+
+
+

examples/Example_taku1.cc

@@ -0,0 +1,479 @@
+/*
+ * Warning: This code illustrative only: not well tested, and not meant for production use
+ * without regression / tests being applied
+ */
+
+#include <Grid/Grid.h>
+
+using namespace std;
+using namespace Grid;
+
+RealD LLscale =1.0;
+RealD LCscale =1.0;
+
+template<class Gimpl,class Field> class CovariantLaplacianCshift : public SparseMatrixBase<Field>
+{
+public:
+  INHERIT_GIMPL_TYPES(Gimpl);
+
+  GridBase *grid;
+  GaugeField U;
+  
+  CovariantLaplacianCshift(GaugeField &_U)    :
+    grid(_U.Grid()),
+    U(_U) {  };
+
+  virtual GridBase *Grid(void) { return grid; };
+
+  virtual void  M    (const Field &in, Field &out)
+  {
+    out=Zero();
+    for(int mu=0;mu<Nd-1;mu++) {
+      GaugeLinkField Umu = PeekIndex<LorentzIndex>(U, mu); // NB: Inefficent
+      out = out - Gimpl::CovShiftForward(Umu,mu,in);    
+      out = out - Gimpl::CovShiftBackward(Umu,mu,in);    
+      out = out + 2.0*in;
+    }
+  };
+  virtual void  Mdag (const Field &in, Field &out) { M(in,out);}; // Laplacian is hermitian
+  virtual  void Mdiag    (const Field &in, Field &out)                  {assert(0);}; // Unimplemented need only for multigrid
+  virtual  void Mdir     (const Field &in, Field &out,int dir, int disp){assert(0);}; // Unimplemented need only for multigrid
+  virtual  void MdirAll  (const Field &in, std::vector<Field> &out)     {assert(0);}; // Unimplemented need only for multigrid
+};
+
+void MakePhase(Coordinate mom,LatticeComplex &phase)
+{
+  GridBase *grid = phase.Grid();
+  auto latt_size = grid->GlobalDimensions();
+  ComplexD ci(0.0,1.0);
+  phase=Zero();
+
+  LatticeComplex coor(phase.Grid());
+  for(int mu=0;mu<Nd;mu++){
+    RealD TwoPiL =  M_PI * 2.0/ latt_size[mu];
+    LatticeCoordinate(coor,mu);
+    phase = phase + (TwoPiL * mom[mu]) * coor;
+  }
+  phase = exp(phase*ci);
+}
+
+void PointSource(Coordinate &coor,LatticePropagator &source)
+{
+  //  Coordinate coor({0,0,0,0});
+  source=Zero();
+  SpinColourMatrix kronecker; kronecker=1.0;
+  pokeSite(kronecker,source,coor);
+}
+void Z2WallSource(GridParallelRNG &RNG,int tslice,LatticePropagator &source)
+{
+  GridBase *grid = source.Grid();
+  LatticeComplex noise(grid);
+  LatticeComplex zz(grid); zz=Zero();
+  LatticeInteger t(grid);
+
+  RealD nrm=1.0/sqrt(2);
+  bernoulli(RNG, noise); // 0,1 50:50
+
+  noise = (2.*noise - Complex(1,1))*nrm;
+
+  LatticeCoordinate(t,Tdir);
+  noise = where(t==Integer(tslice), noise, zz);
+
+  source = 1.0;
+  source = source*noise;
+  std::cout << " Z2 wall " << norm2(source) << std::endl;
+}
+template<class Field>
+void GaussianSmear(LatticeGaugeField &U,Field &unsmeared,Field &smeared)
+{
+  typedef CovariantLaplacianCshift <PeriodicGimplR,Field> Laplacian_t;
+  Laplacian_t Laplacian(U);
+
+  Integer Iterations = 40;
+  Real width = 2.0;
+  Real coeff = (width*width) / Real(4*Iterations);
+
+  Field tmp(U.Grid());
+  smeared=unsmeared;
+  //  chi = (1-p^2/2N)^N kronecker
+  for(int n = 0; n < Iterations; ++n) {
+    Laplacian.M(smeared,tmp);
+    smeared = smeared - coeff*tmp;
+    std::cout << " smear iter " << n<<" " <<norm2(smeared)<<std::endl;
+  }
+}
+void GaussianSource(Coordinate &site,LatticeGaugeField &U,LatticePropagator &source)
+{
+  LatticePropagator tmp(source.Grid());
+  PointSource(site,source);
+  std::cout << " GaussianSource Kronecker "<< norm2(source)<<std::endl;
+  tmp = source;
+  GaussianSmear(U,tmp,source);
+  std::cout << " GaussianSource Smeared "<< norm2(source)<<std::endl;
+}
+void GaussianWallSource(GridParallelRNG &RNG,int tslice,LatticeGaugeField &U,LatticePropagator &source)
+{
+  Z2WallSource(RNG,tslice,source);
+  auto tmp = source;
+  GaussianSmear(U,tmp,source);
+}
+void SequentialSource(int tslice,Coordinate &mom,LatticePropagator &spectator,LatticePropagator &source)
+{
+  assert(mom.size()==Nd);
+  assert(mom[Tdir] == 0);
+
+  GridBase * grid = spectator.Grid();
+
+
+  LatticeInteger ts(grid);
+  LatticeCoordinate(ts,Tdir);
+  source = Zero();
+  source = where(ts==Integer(tslice),spectator,source); // Stick in a slice of the spectator, zero everywhere else
+
+  LatticeComplex phase(grid);
+  MakePhase(mom,phase);
+
+  source = source *phase;
+}
+
+template<class Action>
+void MasslessFreePropagator(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{			   
+ GridBase *UGrid = source.Grid();
+  GridBase *FGrid = D.FermionGrid();
+  bool fiveD = true; //calculate 5d free propagator
+  RealD mass = D.Mass();
+  LatticeFermion src4  (UGrid);
+  LatticeFermion result4  (UGrid);
+  LatticeFermion result5(FGrid);
+  LatticeFermion src5(FGrid);
+  LatticePropagator prop5(FGrid);
+  for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+ 
+      PropToFerm<Action>(src4,source,s,c);
+
+      D.ImportPhysicalFermionSource(src4,src5);
+      D.FreePropagator(src5,result5,mass,true);
+      std::cout<<GridLogMessage
+               <<"Free 5D prop spin "<<s<<" color "<<c
+               <<" norm2(src5d) "   <<norm2(src5)
+               <<" norm2(result5d) "<<norm2(result5)<<std::endl;
+
+      D.ExportPhysicalFermionSolution(result5,result4);
+
+      FermToProp<Action>(prop5,result5,s,c);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+
+  LatticePropagator Vector_mu(UGrid);
+  LatticeComplex    VV (UGrid);
+  std::vector<TComplex> sumVV;
+  Gamma::Algebra GammaV[3] = {
+    Gamma::Algebra::GammaX,
+    Gamma::Algebra::GammaY,
+    Gamma::Algebra::GammaZ
+  };
+  for( int mu=0;mu<3;mu++ ) {
+    Gamma gV(GammaV[mu]);
+    D.ContractConservedCurrent(prop5,prop5,Vector_mu,source,Current::Vector,mu);
+    VV       = trace(gV*Vector_mu);     // (local) Vector-Vector conserved current
+    sliceSum(VV,sumVV,Tdir);
+    int Nt = sumVV.size();
+    for(int t=0;t<Nt;t++){
+      RealD Ct = real(TensorRemove(sumVV[t]))*LCscale;
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout<<GridLogMessage <<"VVc["<<mu<<"]["<<t<<"] "<< Ct
+               << " 2 pi^2 t^3 C(t) "<< Ct/Cont << " delta Ct "<< Ct-Cont <<std::endl;
+    }
+  }
+}
+template<class Action>
+void MasslessFreePropagator1(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{			   
+  bool fiveD = false; //calculate 4d free propagator
+  RealD mass = D.Mass();
+  GridBase *UGrid = source.Grid();
+  LatticeFermion src4  (UGrid); 
+  LatticeFermion result4  (UGrid); 
+  for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+      PropToFerm<Action>(src4,source,s,c);
+      D.FreePropagator(src4,result4,mass,false);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+}
+
+template<class Action>
+void Solve(Action &D,LatticePropagator &source,LatticePropagator &propagator)
+{
+  GridBase *UGrid = D.GaugeGrid();
+  GridBase *FGrid = D.FermionGrid();
+
+  LatticeFermion src4  (UGrid); 
+  LatticeFermion src5  (FGrid); 
+  LatticeFermion result5(FGrid);
+  LatticeFermion result4(UGrid);
+  LatticePropagator prop5(FGrid);
+  
+  ConjugateGradient<LatticeFermion> CG(1.0e-10,100000);
+  SchurRedBlackDiagMooeeSolve<LatticeFermion> schur(CG);
+  ZeroGuesser<LatticeFermion> ZG; // Could be a DeflatedGuesser if have eigenvectors
+   for(int s=0;s<Nd;s++){
+    for(int c=0;c<Nc;c++){
+      PropToFerm<Action>(src4,source,s,c);
+
+      D.ImportPhysicalFermionSource(src4,src5);
+
+      result5=Zero();
+      schur(D,src5,result5,ZG);
+      std::cout<<GridLogMessage
+	       <<"spin "<<s<<" color "<<c
+	       <<" norm2(src5d) "   <<norm2(src5)
+               <<" norm2(result5d) "<<norm2(result5)<<std::endl;
+
+      D.ExportPhysicalFermionSolution(result5,result4);
+
+      FermToProp<Action>(prop5,result5,s,c);
+      FermToProp<Action>(propagator,result4,s,c);
+    }
+  }
+  LatticePropagator Axial_mu(UGrid); 
+  LatticePropagator Vector_mu(UGrid); 
+
+  LatticeComplex    PA (UGrid); 
+  LatticeComplex    VV (UGrid); 
+  LatticeComplex    PJ5q(UGrid);
+  LatticeComplex    PP (UGrid);
+
+  std::vector<TComplex> sumPA;
+  std::vector<TComplex> sumVV;
+  std::vector<TComplex> sumPP;
+  std::vector<TComplex> sumPJ5q;
+
+  Gamma g5(Gamma::Algebra::Gamma5);
+  D.ContractConservedCurrent(prop5,prop5,Axial_mu,source,Current::Axial,Tdir);
+  PA       = trace(g5*Axial_mu);      // Pseudoscalar-Axial conserved current
+  sliceSum(PA,sumPA,Tdir);
+
+  int Nt{static_cast<int>(sumPA.size())};
+
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PAc["<<t<<"] "<<real(TensorRemove(sumPA[t]))*LCscale<<std::endl;
+
+  PP       = trace(adj(propagator)*propagator); // Pseudoscalar density
+  sliceSum(PP,sumPP,Tdir);
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PP["<<t<<"] "<<real(TensorRemove(sumPP[t]))*LCscale<<std::endl;
+  
+  D.ContractJ5q(prop5,PJ5q);
+  sliceSum(PJ5q,sumPJ5q,Tdir);
+  for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"PJ5q["<<t<<"] "<<real(TensorRemove(sumPJ5q[t]))<<std::endl;
+
+  Gamma::Algebra GammaV[3] = {
+    Gamma::Algebra::GammaX,
+    Gamma::Algebra::GammaY,
+    Gamma::Algebra::GammaZ
+  };
+  for( int mu=0;mu<3;mu++ ) {
+    Gamma gV(GammaV[mu]);
+    D.ContractConservedCurrent(prop5,prop5,Vector_mu,source,Current::Vector,mu);
+    //    auto ss=sliceSum(Vector_mu,Tdir);
+    //    for(int t=0;t<Nt;t++) std::cout<<GridLogMessage <<"ss["<<mu<<"]["<<t<<"] "<<ss[t]<<std::endl;
+    VV       = trace(gV*Vector_mu);     // (local) Vector-Vector conserved current
+    sliceSum(VV,sumVV,Tdir);
+    for(int t=0;t<Nt;t++){
+      RealD Ct = real(TensorRemove(sumVV[t]))*LCscale;
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout<<GridLogMessage <<"VVc["<<mu<<"]["<<t<<"] "<< Ct
+               << " 2 pi^2 t^3 C(t) "<< Ct/Cont << " delta Ct "<< Ct-Cont <<std::endl;
+    }
+  }
+
+}
+
+class MesonFile: Serializable {
+public:
+  GRID_SERIALIZABLE_CLASS_MEMBERS(MesonFile, std::vector<std::vector<Complex> >, data);
+};
+
+void MesonTrace(std::string file,LatticePropagator &q1,LatticePropagator &q2,LatticeComplex &phase)
+{
+  const int nchannel=4;
+  Gamma::Algebra Gammas[nchannel][2] = {
+    {Gamma::Algebra::GammaXGamma5,Gamma::Algebra::GammaXGamma5},
+    {Gamma::Algebra::GammaYGamma5,Gamma::Algebra::GammaYGamma5},
+    {Gamma::Algebra::GammaZGamma5,Gamma::Algebra::GammaZGamma5},
+    {Gamma::Algebra::Identity,Gamma::Algebra::Identity}
+  };
+
+  LatticeComplex meson_CF(q1.Grid());
+  MesonFile MF;
+
+  for(int ch=0;ch<nchannel;ch++){
+
+    Gamma Gsrc(Gammas[ch][0]);
+    Gamma Gsnk(Gammas[ch][1]);
+
+    meson_CF = trace(adj(q1)*Gsnk*q2*adj(Gsrc));
+
+    std::vector<TComplex> meson_T;
+    sliceSum(meson_CF,meson_T, Tdir);
+
+    int nt=meson_T.size();
+
+    std::vector<Complex> corr(nt);
+    for(int t=0;t<nt;t++){
+      corr[t] = TensorRemove(meson_T[t])*LLscale; // Yes this is ugly, not figured a work around
+      RealD Ct = real(corr[t]);
+      RealD Cont=0;
+      if(t) Cont=1.0/(2 * M_PI *M_PI * t*t*t);
+      std::cout << " channel "<<ch<<" t "<<t<<" " <<real(corr[t])<< " 2 pi^2 t^3 C(t) "<< 2 * M_PI *M_PI * t*t*t * Ct
+		<< " deltaC " <<Ct-Cont<<std::endl;
+    }
+    MF.data.push_back(corr);
+  }
+
+  {
+    XmlWriter WR(file);
+    write(WR,"MesonFile",MF);
+  }
+}
+
+int main (int argc, char ** argv)
+{
+  const int Ls=10;
+
+  Grid_init(&argc,&argv);
+
+  // Double precision grids
+  GridCartesian         * UGrid   = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(), 
+								   GridDefaultSimd(Nd,vComplex::Nsimd()),
+								   GridDefaultMpi());
+  GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
+  GridCartesian         * FGrid   = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
+  GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
+
+  //////////////////////////////////////////////////////////////////////
+  // You can manage seeds however you like.
+  // Recommend SeedUniqueString.
+  //////////////////////////////////////////////////////////////////////
+  //  std::vector<int> seeds4({1,2,3,4}); 
+  //  GridParallelRNG          RNG4(UGrid);  RNG4.SeedFixedIntegers(seeds4);
+
+  LatticeGaugeField Umu(UGrid);
+  std::string config;
+  RealD M5=atof(getenv("M5"));
+  RealD mq = atof(getenv("mass"));
+  int   tadpole = atof(getenv("tadpole"));
+  std::vector<RealD> masses({ mq} ); // u/d, s, c ??
+  if( argc > 1 && argv[1][0] != '-' )
+  {
+    std::cout<<GridLogMessage <<"Loading configuration from "<<argv[1]<<std::endl;
+    FieldMetaData header;
+    NerscIO::readConfiguration(Umu, header, argv[1]);
+    config=argv[1];
+    LLscale = 1.0;
+    LCscale = 1.0;
+  }
+  else
+  {
+    SU<Nc>::ColdConfiguration(Umu);
+    config="ColdConfig";
+    //    RealD P=1.0; // Don't scale
+    //    RealD P=0.6388238 // 32Ifine
+    //    RealD P=0.6153342; // 64I
+    RealD P=0.5871119; // 48I
+    RealD u0 = sqrt(sqrt(P));
+    RealD w0 = 1 - M5;
+    std::cout<<GridLogMessage <<"For plaquette P="<<P<<" u0= "<<u0<<std::endl;
+    if ( tadpole == 1 ) {
+      Umu = Umu * u0;
+      //      LLscale = 1.0/(1-w0*w0)/(1-w0*w0)/u0/u0;
+      //      LCscale = 1.0/(1-w0*w0)/(1-w0*w0)/u0/u0;
+      LLscale = 1.0;
+      LCscale = 1.0;
+      std::cout<<GridLogMessage <<"Gauge links are u= u0 "<<std::endl;
+      std::cout<<GridLogMessage <<"M5 =  "<<M5<<std::endl;
+    } else if ( tadpole == 2) {
+      std::cout<<GridLogMessage <<"Gauge links are u=1 "<<std::endl;
+      LLscale = 1.0;
+      LCscale = 1.0;
+      std::cout<<GridLogMessage <<"M5 =  "<<M5<<std::endl;
+    } else {
+      LLscale = 1.0/u0/u0;
+      LCscale = 1.0/u0/u0;
+      M5 = M5 - 4.0 * (1-u0);
+      std::cout<<GridLogMessage <<"Gauge links are u=1 "<<std::endl;
+      std::cout<<GridLogMessage <<"M5mf =  "<<M5<<std::endl;
+    }
+    std::cout<<GridLogMessage <<"mq =  "<<mq<<std::endl;
+    std::cout<<GridLogMessage <<"LLscale =  "<<LLscale<<std::endl;
+    std::cout<<GridLogMessage <<"LCscale =  "<<LCscale<<std::endl;
+  }
+
+  int nmass = masses.size();
+
+  typedef DomainWallFermionR FermionActionR;
+  //  typedef MobiusFermionR FermionActionR;
+  std::vector<FermionActionR *> FermActs;
+  std::vector<DomainWallFermionR *> DWFActs;
+  
+  std::cout<<GridLogMessage <<"======================"<<std::endl;
+  std::cout<<GridLogMessage <<"DomainWallFermion action"<<std::endl;
+  std::cout<<GridLogMessage <<"======================"<<std::endl;
+
+  for(auto mass: masses) {
+    std::vector<Complex> boundary = {1,1,1,-1};
+    FermionActionR::ImplParams Params(boundary);
+    RealD b=1.5;
+    RealD c=0.5;
+    std::cout<<GridLogMessage <<"Making DomainWallFermion action"<<std::endl;
+    //    DWFActs.push_back(new DomainWallFermionR(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5));
+    FermActs.push_back(new FermionActionR(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5,Params));
+    //    FermActs.push_back(new FermionActionR(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass+0.001,M5,b,c));
+    std::cout<<GridLogMessage <<"Made DomainWallFermion action"<<std::endl;
+  }
+
+  LatticePropagator point_source(UGrid);
+
+  Coordinate Origin({0,0,0,0});
+  PointSource   (Origin,point_source);
+  
+  std::vector<LatticePropagator> PointProps(nmass,UGrid);
+  //  std::vector<LatticePropagator> FreeProps(nmass,UGrid);
+  //  LatticePropagator delta(UGrid);
+
+  for(int m=0;m<nmass;m++) {
+    Solve(*FermActs[m],point_source   ,PointProps[m]);
+    //    MasslessFreePropagator(*FermActs[m],point_source   ,FreeProps[m]);
+
+    //    delta = PointProps[m] - FreeProps[m];
+    //    std::cout << " delta "<<norm2(delta) << " FFT "<<norm2(FreeProps[m])<< " CG " <<norm2(PointProps[m])<<std::endl;
+  }
+
+  LatticeComplex phase(UGrid);
+  Coordinate mom({0,0,0,0});
+  MakePhase(mom,phase);
+  
+  for(int m1=0 ;m1<nmass;m1++) {
+  for(int m2=m1;m2<nmass;m2++) {
+    std::stringstream ssp,ssg,ssz;
+
+    ssp<<config<< "_m" << m1 << "_m"<< m2 << "_point_meson.xml";
+    ssz<<config<< "_m" << m1 << "_m"<< m2 << "_free_meson.xml";
+
+    std::cout << "CG determined VV correlation function"<<std::endl;
+    MesonTrace(ssp.str(),PointProps[m1],PointProps[m2],phase);
+    
+    //    std::cout << "FFT derived VV correlation function"<<std::endl;
+    //    MesonTrace(ssz.str(),FreeProps[m1],FreeProps[m2],phase);
+  }}
+
+  Grid_finalize();
+}
+
+
+

tests/Test_dwf_mixedcg_prec.cc

@@ -95,26 +95,34 @@ int main (int argc, char ** argv)
   std::cout << GridLogMessage << "::::::::::::: Starting mixed CG" << std::endl;
   MixedPrecisionConjugateGradient<LatticeFermionD,LatticeFermionF> mCG(1.0e-8, 10000, 50, FrbGrid_f, HermOpEO_f, HermOpEO);
   double t1,t2,flops;
+  double MdagMsiteflops = 1452; // Mobius (real coeffs)
+  // CG overhead: 8 inner product, 4+8 axpy_norm, 4+4 linear comb (2 of)
+  double CGsiteflops = (8+4+8+4+4)*Nc*Ns ;
+  std:: cout << " MdagM site flops = "<< 4*MdagMsiteflops<<std::endl;
+  std:: cout << " CG    site flops = "<< CGsiteflops <<std::endl;
   int iters;
-  for(int i=0;i<100;i++){
+  for(int i=0;i<200;i++){
     result_o = Zero();
     t1=usecond();
     mCG(src_o,result_o);
     t2=usecond();
     iters = mCG.TotalInnerIterations; //Number of inner CG iterations
-    flops = 1320.0*2*FGrid->gSites()*iters;
+    flops = MdagMsiteflops*4*FrbGrid->gSites()*iters;
+    flops+= CGsiteflops*FrbGrid->gSites()*iters;
     std::cout << " SinglePrecision iterations/sec "<< iters/(t2-t1)*1000.*1000.<<std::endl;
     std::cout << " SinglePrecision GF/s "<< flops/(t2-t1)/1000.<<std::endl;
   }
   std::cout << GridLogMessage << "::::::::::::: Starting regular CG" << std::endl;
   ConjugateGradient<LatticeFermionD> CG(1.0e-8,10000);
-  for(int i=0;i<100;i++){
+  for(int i=0;i<1;i++){
     result_o_2 = Zero();
     t1=usecond();
     CG(HermOpEO,src_o,result_o_2);
     t2=usecond();
     iters = CG.IterationsToComplete;
-    flops = 1320.0*2*FGrid->gSites()*iters;
+    flops = MdagMsiteflops*4*FrbGrid->gSites()*iters; 
+    flops+= CGsiteflops*FrbGrid->gSites()*iters;
+    
     std::cout << " DoublePrecision iterations/sec "<< iters/(t2-t1)*1000.*1000.<<std::endl;
     std::cout << " DoublePrecision GF/s "<< flops/(t2-t1)/1000.<<std::endl;
   }

tests/Test_gfield_shift.cc

@@ -0,0 +1,183 @@
+    /*************************************************************************************
+
+    Grid physics library, www.github.com/paboyle/Grid 
+
+    Source file: ./tests/Test_gfield_shift.cc
+
+    Copyright (C) 2015
+
+Author: Christopher Kelly <ckelly@bnl.gov>
+Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
+Author: Peter Boyle <paboyle@ph.ed.ac.uk>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+    See the full license in the file "LICENSE" in the top level distribution directory
+    *************************************************************************************/
+    /*  END LEGAL */
+
+//Test the shifting of the gauge field that respects the boundary conditions
+#include <Grid/Grid.h>
+
+using namespace Grid;
+ ;
+
+typedef ConjugateGimplR Gimpl; //can choose periodic / charge conjugate directions at wil
+typedef Gimpl::GaugeField GaugeField;
+typedef Gimpl::GaugeLinkField GaugeLinkField;
+typedef Gimpl::SiteGaugeField SiteGaugeField;
+typedef Gimpl::SiteGaugeLink SiteGaugeLink;
+
+GaugeField CshiftGaugeField(const GaugeField &U, const int dir, const int shift){
+  GridBase *Grid = U.Grid();
+
+  GaugeField out(Grid);
+  GaugeLinkField Umu(Grid);
+  for(int mu=0;mu<Grid->Nd();mu++){
+    Umu = PeekIndex<LorentzIndex>(U, mu);
+    Umu = Gimpl::CshiftLink(Umu,dir,shift);
+    PokeIndex<LorentzIndex>(out,Umu,mu);
+  }
+  return out;
+}
+
+
+int main (int argc, char ** argv)
+{
+  Grid_init(&argc,&argv);
+
+  auto latt_size   = GridDefaultLatt();
+  auto simd_layout = GridDefaultSimd(4,vComplex::Nsimd());
+  auto mpi_layout  = GridDefaultMpi();
+
+  std::vector<int> conj_dirs = {1,1,0,0}; 
+  Gimpl::setDirections(conj_dirs);
+
+  GridCartesian        Fine(latt_size,simd_layout,mpi_layout);
+
+  GridParallelRNG      FineRNG(&Fine);  FineRNG.SeedFixedIntegers(std::vector<int>({45,12,81,9}));
+
+
+  GaugeField U(&Fine);
+  GaugeField ShiftU(&Fine);
+
+  GaugeLinkField link_field(&Fine), link_field_2(&Fine);
+
+  //Like Test_cshift we put the lex coordinate index on each site but make it imaginary
+  //so we can tell when it was complex conjugated
+  LatticeComplex lex(&Fine);
+  lex=Zero();
+  U = Zero();
+  {
+    LatticeComplex coor(&Fine);
+    Integer stride =1;
+    for(int d=0;d<4;d++){
+      LatticeCoordinate(coor,d);
+      lex = lex + coor*stride;
+      stride=stride*latt_size[d];
+    }
+    PokeIndex<ColourIndex>(link_field, lex, 0,0); //place on 0,0 element of link
+
+    for(int mu=0;mu<Nd;mu++){
+      link_field_2 = link_field + mu*stride; //add in lex-mapping of mu
+      link_field_2 = ComplexD(0,1) * link_field_2; //make imaginary
+      PokeIndex<LorentzIndex>(U, link_field_2, mu);
+    }
+  }
+
+  std::stringstream ss;
+  ss<<"error";
+  for(int d=0;d<Fine._ndimension;d++){
+    ss<<"."<<Fine._processor_coor[d];
+  }
+  ss<<"_wr_"<<Fine._processor;
+  std::string fname(ss.str());
+  std::ofstream ferr(fname);
+  
+  Integer vol4d = latt_size[0]*latt_size[1]*latt_size[2]*latt_size[3];
+
+  bool fail = false;
+  typename SiteGaugeField::scalar_object um;
+  TComplex cm;
+  
+  for(int dir=0;dir<4;dir++){
+    for(int shift=-latt_size[dir]+1;shift<latt_size[dir];shift++){
+      if ( Fine.IsBoss() )
+	std::cout<<GridLogMessage<<"Shifting by "<<shift<<" in direction "<<dir
+		 << " dir is conj ? " << conj_dirs[dir] << std::endl;
+
+      ShiftU = CshiftGaugeField(U,dir,shift);
+
+      Coordinate coor(4);
+      
+      for(coor[3]=0;coor[3]<latt_size[3];coor[3]++){
+      for(coor[2]=0;coor[2]<latt_size[2];coor[2]++){
+      for(coor[1]=0;coor[1]<latt_size[1];coor[1]++){
+      for(coor[0]=0;coor[0]<latt_size[0];coor[0]++){  
+	peekSite(um,ShiftU,coor);
+
+	Coordinate scoor(coor);
+	scoor[dir] = (scoor[dir]+shift + latt_size[dir])%latt_size[dir];
+	
+	Integer slex = scoor[0]
+	  + latt_size[0]*scoor[1]
+	  + latt_size[0]*latt_size[1]*scoor[2]
+	  + latt_size[0]*latt_size[1]*latt_size[2]*scoor[3];
+	
+	for(int mu = 0 ; mu < 4; mu++){
+	  Integer slex_mu = slex + vol4d*mu;
+	  Complex scm(0,slex_mu); //imaginary
+	  if(
+	     ( shift > 0 && coor[dir] >= latt_size[dir]-shift && conj_dirs[dir] ) 
+	     ||
+	     ( shift < 0 && coor[dir] <= -shift-1 && conj_dirs[dir] )
+	     )
+	    scm = conjugate(scm); //CC if pulled over boundary
+
+	  cm = um(mu)()(0,0);
+
+	  RealD nrm = abs(scm-cm()()());
+	  //std::cout << cm << " " << scm << std::endl;
+
+	  Coordinate peer(4);
+	  Complex tmp  =cm;
+	  Integer index=real(tmp);
+
+	  Integer cm_mu = index / vol4d;
+	  index = index % vol4d;
+	  Lexicographic::CoorFromIndex(peer,index,latt_size);
+
+	  if (nrm > 0){
+	    ferr<<"FAIL mu " << mu << " shift "<< shift<<" in dir "<< dir<<" ["<<coor[0]<<","<<coor[1]<<","<<coor[2]<<","<<coor[3]<<"] = "<< cm()()()<<" expect "<<scm<<"  "<<nrm<<std::endl;
+	    ferr<<"Got mu "<< cm_mu << " site " <<index<<" : " << peer[0]<<","<<peer[1]<<","<<peer[2]<<","<<peer[3]<<std::endl;
+
+	    index=real(scm);
+	    Integer scm_mu = index / vol4d;
+	    index = index % vol4d;
+	    Lexicographic::CoorFromIndex(peer,index,latt_size);
+	    ferr<<"Expect mu " << scm_mu << " site " <<index<<": " << peer[0]<<","<<peer[1]<<","<<peer[2]<<","<<peer[3]<<std::endl;
+	    fail = true;
+	  }
+	}
+
+	}}}}
+    }
+  }
+
+  if(fail) std::cout << "Test FAILED : see " << fname << " for more details" << std::endl;
+  else std::cout << "Test Passed" << std::endl;
+
+  Grid_finalize();
+}

tests/smearing/Test_WilsonFlow_adaptive.cc

@@ -0,0 +1,153 @@
+/*************************************************************************************
+
+Grid physics library, www.github.com/paboyle/Grid
+
+Source file: ./tests/hmc/Test_WilsonFlow_adaptive.cc
+
+Copyright (C) 2017
+
+Author: Christopher Kelly <ckelly@bnl.gov>
+
+This program is free software; you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation; either version 2 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License along
+with this program; if not, write to the Free Software Foundation, Inc.,
+51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+See the full license in the file "LICENSE" in the top level distribution
+directory
+*************************************************************************************/
+/*  END LEGAL */
+#include <Grid/Grid.h>
+
+using namespace Grid;
+
+//Linearly interpolate between two nearest times
+RealD interpolate(const RealD t_int, const std::vector<std::pair<RealD,RealD> > &data){
+  RealD tdiff1=1e32; int t1_idx=-1;
+  RealD tdiff2=1e32; int t2_idx=-1;
+
+  for(int i=0;i<data.size();i++){
+    RealD diff = fabs(data[i].first-t_int);
+    //std::cout << "targ " << t_int << " cur " << data[i].first << " diff " << diff << " best diff1 " << tdiff1 << " diff2 " << tdiff2 << std::endl;
+
+    if(diff < tdiff1){ 
+      if(tdiff1 < tdiff2){ //swap out tdiff2
+	tdiff2 = tdiff1; t2_idx = t1_idx;
+      }
+      tdiff1 = diff; t1_idx = i; 
+    }
+    else if(diff < tdiff2){ tdiff2 = diff; t2_idx = i; }
+  }
+  assert(t1_idx != -1 && t2_idx != -1);
+  
+  RealD t2 = data[t2_idx].first,  v2 = data[t2_idx].second;
+  RealD t1 = data[t1_idx].first,  v1 = data[t1_idx].second;
+  
+  //v = a + bt
+  //v2-v1 = b(t2-t1)
+  RealD b = (v2-v1)/(t2-t1);
+  RealD a = v1 - b*t1;
+  RealD vout = a + b*t_int;
+
+  //std::cout << "Interpolate to " << t_int << " two closest points " << t1  << " " << t2 
+  //<< " with values " << v1 << " "<< v2 << " : got " << vout <<  std::endl;
+  return vout;
+}
+
+
+int main(int argc, char **argv) {
+  Grid_init(&argc, &argv);
+  GridLogLayout();
+
+  auto latt_size   = GridDefaultLatt();
+  auto simd_layout = GridDefaultSimd(Nd, vComplex::Nsimd());
+  auto mpi_layout  = GridDefaultMpi();
+  GridCartesian               Grid(latt_size, simd_layout, mpi_layout);
+  GridRedBlackCartesian     RBGrid(&Grid);
+
+  std::vector<int> seeds({1, 2, 3, 4, 5});
+  GridSerialRNG sRNG;
+  GridParallelRNG pRNG(&Grid);
+  pRNG.SeedFixedIntegers(seeds);
+
+  LatticeGaugeField U(&Grid);
+  SU<Nc>::HotConfiguration(pRNG, U);
+
+  int Nstep = 300;
+  RealD epsilon = 0.01;
+  RealD maxTau = Nstep*epsilon;
+  RealD tolerance = 1e-4;
+
+  for(int i=1;i<argc;i++){
+    std::string sarg(argv[i]);
+    if(sarg == "--tolerance"){
+      std::stringstream ss; ss << argv[i+1]; ss >> tolerance;
+    }
+  }
+  std::cout << "Adaptive smear tolerance " << tolerance << std::endl;
+
+  //Setup iterative Wilson flow
+  WilsonFlow<PeriodicGimplD> wflow(epsilon,Nstep);
+  wflow.resetActions();    
+
+  std::vector<std::pair<RealD, RealD> > meas_orig;
+
+  wflow.addMeasurement(1, [&wflow,&meas_orig](int step, RealD t, const LatticeGaugeField &U){ 
+      std::cout << GridLogMessage << "[WilsonFlow] Computing Cloverleaf energy density for step " << step << std::endl;
+      meas_orig.push_back( {t, wflow.energyDensityCloverleaf(t,U)} );
+    });
+
+  //Setup adaptive Wilson flow
+  WilsonFlowAdaptive<PeriodicGimplD> wflow_ad(epsilon,maxTau,tolerance);
+  wflow_ad.resetActions();    
+
+  std::vector<std::pair<RealD, RealD> > meas_adaptive;
+
+  wflow_ad.addMeasurement(1, [&wflow_ad,&meas_adaptive](int step, RealD t, const LatticeGaugeField &U){ 
+      std::cout << GridLogMessage << "[WilsonFlow] Computing Cloverleaf energy density for step " << step << std::endl;
+      meas_adaptive.push_back( {t, wflow_ad.energyDensityCloverleaf(t,U)} );
+    });
+
+  //Run
+  LatticeGaugeFieldD Vtmp(U.Grid());
+  wflow.smear(Vtmp, U); //basic smear
+
+  Vtmp = Zero();
+  wflow_ad.smear(Vtmp, U);
+
+  //Output values for plotting
+  {
+    std::ofstream out("wflow_t2E_orig.dat");
+    out.precision(16);
+    for(auto const &e: meas_orig){
+      out << e.first << " " << e.second << std::endl;
+    }
+  }
+  {
+    std::ofstream out("wflow_t2E_adaptive.dat");
+    out.precision(16);
+    for(auto const &e: meas_adaptive){
+      out << e.first << " " << e.second << std::endl;
+    }
+  }
+  
+  //Compare at times available with adaptive smearing
+  for(int i=0;i<meas_adaptive.size();i++){
+    RealD t = meas_adaptive[i].first;
+    RealD v_adaptive = meas_adaptive[i].second;
+    RealD v_orig = interpolate(t,  meas_orig); //should be very precise due to fine timestep
+    std::cout << t << " orig: " << v_orig << " adaptive: " << v_adaptive << " reldiff: " << (v_adaptive-v_orig)/v_orig << std::endl;
+  }
+  
+  std::cout << GridLogMessage << "Done" << std::endl;
+  Grid_finalize();
+}