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@ -69,7 +69,8 @@ NAMESPACE_CHECK(BiCGSTAB);
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|||||||
#include <Grid/algorithms/iterative/PowerMethod.h>
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#include <Grid/algorithms/iterative/PowerMethod.h>
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||||||
|
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||||||
NAMESPACE_CHECK(PowerMethod);
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NAMESPACE_CHECK(PowerMethod);
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||||||
#include <Grid/algorithms/CoarsenedMatrix.h>
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#include <Grid/algorithms/multigrid/MultiGrid.h>
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||||||
|
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||||||
NAMESPACE_CHECK(CoarsendMatrix);
|
NAMESPACE_CHECK(CoarsendMatrix);
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||||||
#include <Grid/algorithms/FFT.h>
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#include <Grid/algorithms/FFT.h>
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||||||
|
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||||||
|
@ -90,9 +90,8 @@ public:
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order=_order;
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order=_order;
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||||||
|
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||||||
if(order < 2) exit(-1);
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if(order < 2) exit(-1);
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||||||
Coeffs.resize(order);
|
Coeffs.resize(order,0.0);
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Coeffs.assign(0.,order);
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Coeffs[order-1] = 1.0;
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||||||
Coeffs[order-1] = 1.;
|
|
||||||
};
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};
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||||||
|
|
||||||
// PB - more efficient low pass drops high modes above the low as 1/x uses all Chebyshev's.
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// PB - more efficient low pass drops high modes above the low as 1/x uses all Chebyshev's.
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||||||
|
@ -33,218 +33,254 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
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|||||||
* Script A = SolverMatrix
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* Script A = SolverMatrix
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||||||
* Script P = Preconditioner
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* Script P = Preconditioner
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||||||
*
|
*
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||||||
* Deflation methods considered
|
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||||||
* -- Solve P A x = P b [ like Luscher ]
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* DEF-1 M P A x = M P b [i.e. left precon]
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||||||
* DEF-2 P^T M A x = P^T M b
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* ADEF-1 Preconditioner = M P + Q [ Q + M + M A Q]
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* ADEF-2 Preconditioner = P^T M + Q
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* BNN Preconditioner = P^T M P + Q
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* BNN2 Preconditioner = M P + P^TM +Q - M P A M
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||||||
*
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||||||
* Implement ADEF-2
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* Implement ADEF-2
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*
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*
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||||||
* Vstart = P^Tx + Qb
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* Vstart = P^Tx + Qb
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* M1 = P^TM + Q
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* M1 = P^TM + Q
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* M2=M3=1
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* M2=M3=1
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* Vout = x
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||||||
*/
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*/
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||||||
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NAMESPACE_BEGIN(Grid);
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||||||
// abstract base
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template<class Field>
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template<class Field, class CoarseField>
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class TwoLevelCG : public LinearFunction<Field>
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class TwoLevelFlexiblePcg : public LinearFunction<Field>
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||||||
{
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{
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public:
|
public:
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||||||
int verbose;
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|
||||||
RealD Tolerance;
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RealD Tolerance;
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Integer MaxIterations;
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Integer MaxIterations;
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const int mmax = 5;
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|
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GridBase *grid;
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GridBase *grid;
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GridBase *coarsegrid;
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LinearOperatorBase<Field> *_Linop
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// Fine operator, Smoother, CoarseSolver
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OperatorFunction<Field> *_Smoother,
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LinearOperatorBase<Field> &_FineLinop;
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||||||
LinearFunction<CoarseField> *_CoarseSolver;
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LinearFunction<Field> &_Smoother;
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||||||
|
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||||||
// Need somthing that knows how to get from Coarse to fine and back again
|
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||||||
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// more most opertor functions
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// more most opertor functions
|
||||||
TwoLevelFlexiblePcg(RealD tol,
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TwoLevelCG(RealD tol,
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||||||
Integer maxit,
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Integer maxit,
|
||||||
LinearOperatorBase<Field> *Linop,
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LinearOperatorBase<Field> &FineLinop,
|
||||||
LinearOperatorBase<Field> *SmootherLinop,
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LinearFunction<Field> &Smoother,
|
||||||
OperatorFunction<Field> *Smoother,
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GridBase *fine) :
|
||||||
OperatorFunction<CoarseField> CoarseLinop
|
|
||||||
) :
|
|
||||||
Tolerance(tol),
|
Tolerance(tol),
|
||||||
MaxIterations(maxit),
|
MaxIterations(maxit),
|
||||||
_Linop(Linop),
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_FineLinop(FineLinop),
|
||||||
_PreconditionerLinop(PrecLinop),
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_Smoother(Smoother)
|
||||||
_Preconditioner(Preconditioner)
|
|
||||||
{
|
{
|
||||||
verbose=0;
|
grid = fine;
|
||||||
};
|
};
|
||||||
|
|
||||||
// The Pcg routine is common to all, but the various matrices differ from derived
|
virtual void operator() (const Field &src, Field &x)
|
||||||
// implementation to derived implmentation
|
{
|
||||||
void operator() (const Field &src, Field &psi){
|
Field resid(grid);
|
||||||
void operator() (const Field &src, Field &psi){
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|
||||||
|
|
||||||
psi.Checkerboard() = src.Checkerboard();
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|
||||||
grid = src.Grid();
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|
||||||
|
|
||||||
RealD f;
|
RealD f;
|
||||||
RealD rtzp,rtz,a,d,b;
|
RealD rtzp,rtz,a,d,b;
|
||||||
RealD rptzp;
|
RealD rptzp;
|
||||||
RealD tn;
|
|
||||||
RealD guess = norm2(psi);
|
|
||||||
RealD ssq = norm2(src);
|
|
||||||
RealD rsq = ssq*Tolerance*Tolerance;
|
|
||||||
|
|
||||||
/////////////////////////////
|
Field p(grid);
|
||||||
// Set up history vectors
|
|
||||||
/////////////////////////////
|
|
||||||
std::vector<Field> p (mmax,grid);
|
|
||||||
std::vector<Field> mmp(mmax,grid);
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|
||||||
std::vector<RealD> pAp(mmax);
|
|
||||||
|
|
||||||
Field x (grid); x = psi;
|
|
||||||
Field z(grid);
|
Field z(grid);
|
||||||
Field tmp(grid);
|
Field tmp(grid);
|
||||||
|
Field mmp(grid);
|
||||||
Field r (grid);
|
Field r (grid);
|
||||||
Field mu (grid);
|
Field mu (grid);
|
||||||
|
Field rp (grid);
|
||||||
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|
||||||
|
//Initial residual computation & set up
|
||||||
|
double tn;
|
||||||
|
|
||||||
|
GridStopWatch HDCGTimer;
|
||||||
|
HDCGTimer.Start();
|
||||||
//////////////////////////
|
//////////////////////////
|
||||||
// x0 = Vstart -- possibly modify guess
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// x0 = Vstart -- possibly modify guess
|
||||||
//////////////////////////
|
//////////////////////////
|
||||||
x=src;
|
x=Zero();
|
||||||
Vstart(x,src);
|
Vstart(x,src);
|
||||||
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||||||
// r0 = b -A x0
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// r0 = b -A x0
|
||||||
HermOp(x,mmp); // Shouldn't this be something else?
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_FineLinop.HermOp(x,mmp);
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||||||
axpy (r, -1.0,mmp[0], src); // Recomputes r=src-Ax0
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axpy(r, -1.0, mmp, src); // Recomputes r=src-x0
|
||||||
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rp=r;
|
||||||
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|
||||||
//////////////////////////////////
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//////////////////////////////////
|
||||||
// Compute z = M1 x
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// Compute z = M1 x
|
||||||
//////////////////////////////////
|
//////////////////////////////////
|
||||||
M1(r,z,tmp,mp,SmootherMirs);
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PcgM1(r,z);
|
||||||
rtzp =real(innerProduct(r,z));
|
rtzp =real(innerProduct(r,z));
|
||||||
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|
||||||
///////////////////////////////////////
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///////////////////////////////////////
|
||||||
// Solve for Mss mu = P A z and set p = z-mu
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// Except Def2, M2 is trivial
|
||||||
// Def2: p = 1 - Q Az = Pright z
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|
||||||
// Other algos M2 is trivial
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|
||||||
///////////////////////////////////////
|
///////////////////////////////////////
|
||||||
M2(z,p[0]);
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p=z;
|
||||||
|
|
||||||
for (int k=0;k<=MaxIterations;k++){
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RealD ssq = norm2(src);
|
||||||
|
RealD rsq = ssq*Tolerance*Tolerance;
|
||||||
|
|
||||||
int peri_k = k % mmax;
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std::cout<<GridLogMessage<<"HDCG: k=0 residual "<<rtzp<<" target rsq "<<rsq<<" ssq "<<ssq<<std::endl;
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||||||
int peri_kp = (k+1) % mmax;
|
|
||||||
|
for (int k=1;k<=MaxIterations;k++){
|
||||||
|
|
||||||
rtz=rtzp;
|
rtz=rtzp;
|
||||||
d= M3(p[peri_k],mp,mmp[peri_k],tmp);
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d= PcgM3(p,mmp);
|
||||||
a = rtz/d;
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a = rtz/d;
|
||||||
|
|
||||||
// Memorise this
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axpy(x,a,p,x);
|
||||||
pAp[peri_k] = d;
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RealD rn = axpy_norm(r,-a,mmp,r);
|
||||||
|
|
||||||
axpy(x,a,p[peri_k],x);
|
PcgM1(r,z);
|
||||||
RealD rn = axpy_norm(r,-a,mmp[peri_k],r);
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|
||||||
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|
||||||
// Compute z = M x
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|
||||||
M1(r,z,tmp,mp);
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|
||||||
|
|
||||||
rtzp =real(innerProduct(r,z));
|
rtzp =real(innerProduct(r,z));
|
||||||
|
|
||||||
M2(z,mu); // ADEF-2 this is identity. Axpy possible to eliminate
|
int ipcg=1; // almost free inexact preconditioned CG
|
||||||
|
if (ipcg) {
|
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p[peri_kp]=p[peri_k];
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rptzp =real(innerProduct(rp,z));
|
||||||
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} else {
|
||||||
// Standard search direction p -> z + b p ; b =
|
rptzp =0;
|
||||||
b = (rtzp)/rtz;
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|
||||||
|
|
||||||
int northog;
|
|
||||||
// northog = (peri_kp==0)?1:peri_kp; // This is the fCG(mmax) algorithm
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|
||||||
northog = (k>mmax-1)?(mmax-1):k; // This is the fCG-Tr(mmax-1) algorithm
|
|
||||||
|
|
||||||
for(int back=0; back < northog; back++){
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|
||||||
int peri_back = (k-back)%mmax;
|
|
||||||
RealD pbApk= real(innerProduct(mmp[peri_back],p[peri_kp]));
|
|
||||||
RealD beta = -pbApk/pAp[peri_back];
|
|
||||||
axpy(p[peri_kp],beta,p[peri_back],p[peri_kp]);
|
|
||||||
}
|
}
|
||||||
|
b = (rtzp-rptzp)/rtz;
|
||||||
|
|
||||||
|
PcgM2(z,mu); // ADEF-2 this is identity. Axpy possible to eliminate
|
||||||
|
|
||||||
|
axpy(p,b,p,mu); // mu = A r
|
||||||
|
|
||||||
RealD rrn=sqrt(rn/ssq);
|
RealD rrn=sqrt(rn/ssq);
|
||||||
std::cout<<GridLogMessage<<"TwoLevelfPcg: k= "<<k<<" residual = "<<rrn<<std::endl;
|
RealD rtn=sqrt(rtz/ssq);
|
||||||
|
std::cout<<GridLogMessage<<"HDCG: Pcg k= "<<k<<" residual = "<<rrn<<std::endl;
|
||||||
|
|
||||||
|
if ( ipcg ) {
|
||||||
|
axpy(rp,0.0,r,r);
|
||||||
|
}
|
||||||
|
|
||||||
// Stopping condition
|
// Stopping condition
|
||||||
if ( rn <= rsq ) {
|
if ( rn <= rsq ) {
|
||||||
|
|
||||||
HermOp(x,mmp); // Shouldn't this be something else?
|
HDCGTimer.Stop();
|
||||||
axpy(tmp,-1.0,src,mmp[0]);
|
std::cout<<GridLogMessage<<"HDCG: Pcg converged in "<<k<<" iterations and "<<HDCGTimer.Elapsed()<<std::endl;;
|
||||||
|
|
||||||
RealD psinorm = sqrt(norm2(x));
|
_FineLinop.HermOp(x,mmp);
|
||||||
|
axpy(tmp,-1.0,src,mmp);
|
||||||
|
|
||||||
|
RealD mmpnorm = sqrt(norm2(mmp));
|
||||||
|
RealD xnorm = sqrt(norm2(x));
|
||||||
RealD srcnorm = sqrt(norm2(src));
|
RealD srcnorm = sqrt(norm2(src));
|
||||||
RealD tmpnorm = sqrt(norm2(tmp));
|
RealD tmpnorm = sqrt(norm2(tmp));
|
||||||
RealD true_residual = tmpnorm/srcnorm;
|
RealD true_residual = tmpnorm/srcnorm;
|
||||||
std::cout<<GridLogMessage<<"TwoLevelfPcg: true residual is "<<true_residual<<std::endl;
|
std::cout<<GridLogMessage
|
||||||
std::cout<<GridLogMessage<<"TwoLevelfPcg: target residual was"<<Tolerance<<std::endl;
|
<<"HDCG: true residual is "<<true_residual
|
||||||
return k;
|
<<" solution "<<xnorm
|
||||||
|
<<" source "<<srcnorm
|
||||||
|
<<" mmp "<<mmpnorm
|
||||||
|
<<std::endl;
|
||||||
|
|
||||||
|
return;
|
||||||
}
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
// Non-convergence
|
std::cout<<GridLogMessage<<"HDCG: not converged"<<std::endl;
|
||||||
assert(0);
|
RealD xnorm = sqrt(norm2(x));
|
||||||
|
RealD srcnorm = sqrt(norm2(src));
|
||||||
|
std::cout<<GridLogMessage<<"HDCG: non-converged solution "<<xnorm<<" source "<<srcnorm<<std::endl;
|
||||||
|
|
||||||
|
return ;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
public:
|
public:
|
||||||
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp) {
|
virtual void PcgM1(Field & in, Field & out) =0;
|
||||||
|
virtual void Vstart(Field & x,const Field & src)=0;
|
||||||
|
|
||||||
|
virtual void PcgM2(const Field & in, Field & out) {
|
||||||
|
out=in;
|
||||||
}
|
}
|
||||||
|
|
||||||
virtual void M1(Field & in, Field & out) {// the smoother
|
virtual RealD PcgM3(const Field & p, Field & mmp){
|
||||||
|
RealD dd;
|
||||||
|
_FineLinop.HermOp(p,mmp);
|
||||||
|
ComplexD dot = innerProduct(p,mmp);
|
||||||
|
dd=real(dot);
|
||||||
|
return dd;
|
||||||
|
}
|
||||||
|
|
||||||
|
/////////////////////////////////////////////////////////////////////
|
||||||
|
// Only Def1 has non-trivial Vout.
|
||||||
|
/////////////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
template<class Field, class CoarseField, class Aggregation>
|
||||||
|
class TwoLevelADEF2 : public TwoLevelCG<Field>
|
||||||
|
{
|
||||||
|
public:
|
||||||
|
///////////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Need something that knows how to get from Coarse to fine and back again
|
||||||
|
// void ProjectToSubspace(CoarseVector &CoarseVec,const FineField &FineVec){
|
||||||
|
// void PromoteFromSubspace(const CoarseVector &CoarseVec,FineField &FineVec){
|
||||||
|
///////////////////////////////////////////////////////////////////////////////////
|
||||||
|
GridBase *coarsegrid;
|
||||||
|
Aggregation &_Aggregates;
|
||||||
|
LinearFunction<CoarseField> &_CoarseSolver;
|
||||||
|
LinearFunction<CoarseField> &_CoarseSolverPrecise;
|
||||||
|
///////////////////////////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
// more most opertor functions
|
||||||
|
TwoLevelADEF2(RealD tol,
|
||||||
|
Integer maxit,
|
||||||
|
LinearOperatorBase<Field> &FineLinop,
|
||||||
|
LinearFunction<Field> &Smoother,
|
||||||
|
LinearFunction<CoarseField> &CoarseSolver,
|
||||||
|
LinearFunction<CoarseField> &CoarseSolverPrecise,
|
||||||
|
Aggregation &Aggregates
|
||||||
|
) :
|
||||||
|
TwoLevelCG<Field>(tol,maxit,FineLinop,Smoother,Aggregates.FineGrid),
|
||||||
|
_CoarseSolver(CoarseSolver),
|
||||||
|
_CoarseSolverPrecise(CoarseSolverPrecise),
|
||||||
|
_Aggregates(Aggregates)
|
||||||
|
{
|
||||||
|
coarsegrid = Aggregates.CoarseGrid;
|
||||||
|
};
|
||||||
|
|
||||||
|
virtual void PcgM1(Field & in, Field & out)
|
||||||
|
{
|
||||||
// [PTM+Q] in = [1 - Q A] M in + Q in = Min + Q [ in -A Min]
|
// [PTM+Q] in = [1 - Q A] M in + Q in = Min + Q [ in -A Min]
|
||||||
Field tmp(grid);
|
|
||||||
Field Min(grid);
|
|
||||||
|
|
||||||
PcgM(in,Min); // Smoother call
|
Field tmp(this->grid);
|
||||||
|
Field Min(this->grid);
|
||||||
|
CoarseField PleftProj(this->coarsegrid);
|
||||||
|
CoarseField PleftMss_proj(this->coarsegrid);
|
||||||
|
|
||||||
HermOp(Min,out);
|
GridStopWatch SmootherTimer;
|
||||||
|
GridStopWatch MatrixTimer;
|
||||||
|
SmootherTimer.Start();
|
||||||
|
this->_Smoother(in,Min);
|
||||||
|
SmootherTimer.Stop();
|
||||||
|
|
||||||
|
MatrixTimer.Start();
|
||||||
|
this->_FineLinop.HermOp(Min,out);
|
||||||
|
MatrixTimer.Stop();
|
||||||
axpy(tmp,-1.0,out,in); // tmp = in - A Min
|
axpy(tmp,-1.0,out,in); // tmp = in - A Min
|
||||||
|
|
||||||
ProjectToSubspace(tmp,PleftProj);
|
GridStopWatch ProjTimer;
|
||||||
ApplyInverse(PleftProj,PleftMss_proj); // Ass^{-1} [in - A Min]_s
|
GridStopWatch CoarseTimer;
|
||||||
PromoteFromSubspace(PleftMss_proj,tmp);// tmp = Q[in - A Min]
|
GridStopWatch PromTimer;
|
||||||
|
ProjTimer.Start();
|
||||||
|
this->_Aggregates.ProjectToSubspace(PleftProj,tmp);
|
||||||
|
ProjTimer.Stop();
|
||||||
|
CoarseTimer.Start();
|
||||||
|
this->_CoarseSolver(PleftProj,PleftMss_proj); // Ass^{-1} [in - A Min]_s
|
||||||
|
CoarseTimer.Stop();
|
||||||
|
PromTimer.Start();
|
||||||
|
this->_Aggregates.PromoteFromSubspace(PleftMss_proj,tmp);// tmp = Q[in - A Min]
|
||||||
|
PromTimer.Stop();
|
||||||
|
std::cout << GridLogPerformance << "PcgM1 breakdown "<<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tSmoother " << SmootherTimer.Elapsed() <<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tMatrix " << MatrixTimer.Elapsed() <<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tProj " << ProjTimer.Elapsed() <<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tCoarse " << CoarseTimer.Elapsed() <<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tProm " << PromTimer.Elapsed() <<std::endl;
|
||||||
|
|
||||||
axpy(out,1.0,Min,tmp); // Min+tmp
|
axpy(out,1.0,Min,tmp); // Min+tmp
|
||||||
}
|
}
|
||||||
|
|
||||||
virtual void M2(const Field & in, Field & out) {
|
virtual void Vstart(Field & x,const Field & src)
|
||||||
out=in;
|
{
|
||||||
// Must override for Def2 only
|
|
||||||
// case PcgDef2:
|
|
||||||
// Pright(in,out);
|
|
||||||
// break;
|
|
||||||
}
|
|
||||||
|
|
||||||
virtual RealD M3(const Field & p, Field & mmp){
|
|
||||||
double d,dd;
|
|
||||||
HermOpAndNorm(p,mmp,d,dd);
|
|
||||||
return dd;
|
|
||||||
// Must override for Def1 only
|
|
||||||
// case PcgDef1:
|
|
||||||
// d=linop_d->Mprec(p,mmp,tmp,0,1);// Dag no
|
|
||||||
// linop_d->Mprec(mmp,mp,tmp,1);// Dag yes
|
|
||||||
// Pleft(mp,mmp);
|
|
||||||
// d=real(linop_d->inner(p,mmp));
|
|
||||||
}
|
|
||||||
|
|
||||||
virtual void VstartDef2(Field & xconst Field & src){
|
|
||||||
//case PcgDef2:
|
|
||||||
//case PcgAdef2:
|
|
||||||
//case PcgAdef2f:
|
|
||||||
//case PcgV11f:
|
|
||||||
///////////////////////////////////
|
///////////////////////////////////
|
||||||
// Choose x_0 such that
|
// Choose x_0 such that
|
||||||
// x_0 = guess + (A_ss^inv) r_s = guess + Ass_inv [src -Aguess]
|
// x_0 = guess + (A_ss^inv) r_s = guess + Ass_inv [src -Aguess]
|
||||||
@ -256,142 +292,73 @@ class TwoLevelFlexiblePcg : public LinearFunction<Field>
|
|||||||
// = src_s - (A guess)_s - src_s + (A guess)_s
|
// = src_s - (A guess)_s - src_s + (A guess)_s
|
||||||
// = 0
|
// = 0
|
||||||
///////////////////////////////////
|
///////////////////////////////////
|
||||||
Field r(grid);
|
Field r(this->grid);
|
||||||
Field mmp(grid);
|
Field mmp(this->grid);
|
||||||
|
CoarseField PleftProj(this->coarsegrid);
|
||||||
|
CoarseField PleftMss_proj(this->coarsegrid);
|
||||||
|
|
||||||
HermOp(x,mmp);
|
this->_Aggregates.ProjectToSubspace(PleftProj,src);
|
||||||
axpy (r, -1.0, mmp, src); // r_{-1} = src - A x
|
this->_CoarseSolverPrecise(PleftProj,PleftMss_proj); // Ass^{-1} r_s
|
||||||
ProjectToSubspace(r,PleftProj);
|
this->_Aggregates.PromoteFromSubspace(PleftMss_proj,x);
|
||||||
ApplyInverseCG(PleftProj,PleftMss_proj); // Ass^{-1} r_s
|
|
||||||
PromoteFromSubspace(PleftMss_proj,mmp);
|
|
||||||
x=x+mmp;
|
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
template<class Field>
|
||||||
|
class TwoLevelADEF1defl : public TwoLevelCG<Field>
|
||||||
|
{
|
||||||
|
public:
|
||||||
|
const std::vector<Field> &evec;
|
||||||
|
const std::vector<RealD> &eval;
|
||||||
|
|
||||||
|
TwoLevelADEF1defl(RealD tol,
|
||||||
|
Integer maxit,
|
||||||
|
LinearOperatorBase<Field> &FineLinop,
|
||||||
|
LinearFunction<Field> &Smoother,
|
||||||
|
std::vector<Field> &_evec,
|
||||||
|
std::vector<RealD> &_eval) :
|
||||||
|
TwoLevelCG<Field>(tol,maxit,FineLinop,Smoother,_evec[0].Grid()),
|
||||||
|
evec(_evec),
|
||||||
|
eval(_eval)
|
||||||
|
{};
|
||||||
|
|
||||||
|
// Can just inherit existing M2
|
||||||
|
// Can just inherit existing M3
|
||||||
|
|
||||||
|
// Simple vstart - do nothing
|
||||||
virtual void Vstart(Field & x,const Field & src){
|
virtual void Vstart(Field & x,const Field & src){
|
||||||
return;
|
x=src; // Could apply Q
|
||||||
|
};
|
||||||
|
|
||||||
|
// Override PcgM1
|
||||||
|
virtual void PcgM1(Field & in, Field & out)
|
||||||
|
{
|
||||||
|
int N=evec.size();
|
||||||
|
Field Pin(this->grid);
|
||||||
|
Field Qin(this->grid);
|
||||||
|
|
||||||
|
//MP + Q = M(1-AQ) + Q = M
|
||||||
|
// // If we are eigenvector deflating in coarse space
|
||||||
|
// // Q = Sum_i |phi_i> 1/lambda_i <phi_i|
|
||||||
|
// // A Q = Sum_i |phi_i> <phi_i|
|
||||||
|
// // M(1-AQ) = M(1-proj) + Q
|
||||||
|
Qin.Checkerboard()=in.Checkerboard();
|
||||||
|
Qin = Zero();
|
||||||
|
Pin = in;
|
||||||
|
for (int i=0;i<N;i++) {
|
||||||
|
const Field& tmp = evec[i];
|
||||||
|
auto ip = TensorRemove(innerProduct(tmp,in));
|
||||||
|
axpy(Qin, ip / eval[i],tmp,Qin);
|
||||||
|
axpy(Pin, -ip ,tmp,Pin);
|
||||||
}
|
}
|
||||||
|
|
||||||
/////////////////////////////////////////////////////////////////////
|
this->_Smoother(Pin,out);
|
||||||
// Only Def1 has non-trivial Vout. Override in Def1
|
|
||||||
/////////////////////////////////////////////////////////////////////
|
out = out + Qin;
|
||||||
virtual void Vout (Field & in, Field & out,Field & src){
|
|
||||||
out = in;
|
|
||||||
//case PcgDef1:
|
|
||||||
// //Qb + PT x
|
|
||||||
// ProjectToSubspace(src,PleftProj);
|
|
||||||
// ApplyInverse(PleftProj,PleftMss_proj); // Ass^{-1} r_s
|
|
||||||
// PromoteFromSubspace(PleftMss_proj,tmp);
|
|
||||||
//
|
|
||||||
// Pright(in,out);
|
|
||||||
//
|
|
||||||
// linop_d->axpy(out,tmp,out,1.0);
|
|
||||||
// break;
|
|
||||||
}
|
}
|
||||||
|
};
|
||||||
|
|
||||||
////////////////////////////////////////////////////////////////////////////////////////////////
|
NAMESPACE_END(Grid);
|
||||||
// Pright and Pleft are common to all implementations
|
|
||||||
////////////////////////////////////////////////////////////////////////////////////////////////
|
|
||||||
virtual void Pright(Field & in,Field & out){
|
|
||||||
// P_R = [ 1 0 ]
|
|
||||||
// [ -Mss^-1 Msb 0 ]
|
|
||||||
Field in_sbar(grid);
|
|
||||||
|
|
||||||
ProjectToSubspace(in,PleftProj);
|
|
||||||
PromoteFromSubspace(PleftProj,out);
|
|
||||||
axpy(in_sbar,-1.0,out,in); // in_sbar = in - in_s
|
|
||||||
|
|
||||||
HermOp(in_sbar,out);
|
|
||||||
ProjectToSubspace(out,PleftProj); // Mssbar in_sbar (project)
|
|
||||||
|
|
||||||
ApplyInverse (PleftProj,PleftMss_proj); // Mss^{-1} Mssbar
|
|
||||||
PromoteFromSubspace(PleftMss_proj,out); //
|
|
||||||
|
|
||||||
axpy(out,-1.0,out,in_sbar); // in_sbar - Mss^{-1} Mssbar in_sbar
|
|
||||||
}
|
|
||||||
virtual void Pleft (Field & in,Field & out){
|
|
||||||
// P_L = [ 1 -Mbs Mss^-1]
|
|
||||||
// [ 0 0 ]
|
|
||||||
Field in_sbar(grid);
|
|
||||||
Field tmp2(grid);
|
|
||||||
Field Mtmp(grid);
|
|
||||||
|
|
||||||
ProjectToSubspace(in,PleftProj);
|
|
||||||
PromoteFromSubspace(PleftProj,out);
|
|
||||||
axpy(in_sbar,-1.0,out,in); // in_sbar = in - in_s
|
|
||||||
|
|
||||||
ApplyInverse(PleftProj,PleftMss_proj); // Mss^{-1} in_s
|
|
||||||
PromoteFromSubspace(PleftMss_proj,out);
|
|
||||||
|
|
||||||
HermOp(out,Mtmp);
|
|
||||||
|
|
||||||
ProjectToSubspace(Mtmp,PleftProj); // Msbar s Mss^{-1}
|
|
||||||
PromoteFromSubspace(PleftProj,tmp2);
|
|
||||||
|
|
||||||
axpy(out,-1.0,tmp2,Mtmp);
|
|
||||||
axpy(out,-1.0,out,in_sbar); // in_sbar - Msbars Mss^{-1} in_s
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
template<class Field>
|
|
||||||
class TwoLevelFlexiblePcgADef2 : public TwoLevelFlexiblePcg<Field> {
|
|
||||||
public:
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp){
|
|
||||||
|
|
||||||
}
|
|
||||||
virtual void M1(Field & in, Field & out,Field & tmp,Field & mp){
|
|
||||||
|
|
||||||
}
|
|
||||||
virtual void M2(Field & in, Field & out){
|
|
||||||
|
|
||||||
}
|
|
||||||
virtual RealD M3(Field & p, Field & mp,Field & mmp, Field & tmp){
|
|
||||||
|
|
||||||
}
|
|
||||||
virtual void Vstart(Field & in, Field & src, Field & r, Field & mp, Field & mmp, Field & tmp){
|
|
||||||
|
|
||||||
}
|
|
||||||
}
|
|
||||||
/*
|
|
||||||
template<class Field>
|
|
||||||
class TwoLevelFlexiblePcgAD : public TwoLevelFlexiblePcg<Field> {
|
|
||||||
public:
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp);
|
|
||||||
virtual void M1(Field & in, Field & out,Field & tmp,Field & mp);
|
|
||||||
virtual void M2(Field & in, Field & out);
|
|
||||||
virtual RealD M3(Field & p, Field & mp,Field & mmp, Field & tmp);
|
|
||||||
virtual void Vstart(Field & in, Field & src, Field & r, Field & mp, Field & mmp, Field & tmp);
|
|
||||||
}
|
|
||||||
|
|
||||||
template<class Field>
|
|
||||||
class TwoLevelFlexiblePcgDef1 : public TwoLevelFlexiblePcg<Field> {
|
|
||||||
public:
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp);
|
|
||||||
virtual void M1(Field & in, Field & out,Field & tmp,Field & mp);
|
|
||||||
virtual void M2(Field & in, Field & out);
|
|
||||||
virtual RealD M3(Field & p, Field & mp,Field & mmp, Field & tmp);
|
|
||||||
virtual void Vstart(Field & in, Field & src, Field & r, Field & mp, Field & mmp, Field & tmp);
|
|
||||||
virtual void Vout (Field & in, Field & out,Field & src,Field & tmp);
|
|
||||||
}
|
|
||||||
|
|
||||||
template<class Field>
|
|
||||||
class TwoLevelFlexiblePcgDef2 : public TwoLevelFlexiblePcg<Field> {
|
|
||||||
public:
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp);
|
|
||||||
virtual void M1(Field & in, Field & out,Field & tmp,Field & mp);
|
|
||||||
virtual void M2(Field & in, Field & out);
|
|
||||||
virtual RealD M3(Field & p, Field & mp,Field & mmp, Field & tmp);
|
|
||||||
virtual void Vstart(Field & in, Field & src, Field & r, Field & mp, Field & mmp, Field & tmp);
|
|
||||||
}
|
|
||||||
|
|
||||||
template<class Field>
|
|
||||||
class TwoLevelFlexiblePcgV11: public TwoLevelFlexiblePcg<Field> {
|
|
||||||
public:
|
|
||||||
virtual void M(Field & in,Field & out,Field & tmp);
|
|
||||||
virtual void M1(Field & in, Field & out,Field & tmp,Field & mp);
|
|
||||||
virtual void M2(Field & in, Field & out);
|
|
||||||
virtual RealD M3(Field & p, Field & mp,Field & mmp, Field & tmp);
|
|
||||||
virtual void Vstart(Field & in, Field & src, Field & r, Field & mp, Field & mmp, Field & tmp);
|
|
||||||
}
|
|
||||||
*/
|
|
||||||
#endif
|
#endif
|
||||||
|
@ -183,13 +183,13 @@ public:
|
|||||||
<< "\tTrue residual " << true_residual
|
<< "\tTrue residual " << true_residual
|
||||||
<< "\tTarget " << Tolerance << std::endl;
|
<< "\tTarget " << Tolerance << std::endl;
|
||||||
|
|
||||||
std::cout << GridLogMessage << "Time breakdown "<<std::endl;
|
|
||||||
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() <<std::endl;
|
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() <<std::endl;
|
||||||
std::cout << GridLogMessage << "\tMatrix " << MatrixTimer.Elapsed() <<std::endl;
|
std::cout << GridLogPerformance << "Time breakdown "<<std::endl;
|
||||||
std::cout << GridLogMessage << "\tLinalg " << LinalgTimer.Elapsed() <<std::endl;
|
std::cout << GridLogPerformance << "\tMatrix " << MatrixTimer.Elapsed() <<std::endl;
|
||||||
std::cout << GridLogMessage << "\tInner " << InnerTimer.Elapsed() <<std::endl;
|
std::cout << GridLogPerformance << "\tLinalg " << LinalgTimer.Elapsed() <<std::endl;
|
||||||
std::cout << GridLogMessage << "\tAxpyNorm " << AxpyNormTimer.Elapsed() <<std::endl;
|
std::cout << GridLogPerformance << "\tInner " << InnerTimer.Elapsed() <<std::endl;
|
||||||
std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl;
|
std::cout << GridLogPerformance << "\tAxpyNorm " << AxpyNormTimer.Elapsed() <<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl;
|
||||||
|
|
||||||
std::cout << GridLogDebug << "\tMobius flop rate " << DwfFlops/ usecs<< " Gflops " <<std::endl;
|
std::cout << GridLogDebug << "\tMobius flop rate " << DwfFlops/ usecs<< " Gflops " <<std::endl;
|
||||||
|
|
||||||
|
@ -457,7 +457,7 @@ until convergence
|
|||||||
std::vector<Field>& evec,
|
std::vector<Field>& evec,
|
||||||
Field& w,int Nm,int k)
|
Field& w,int Nm,int k)
|
||||||
{
|
{
|
||||||
std::cout<<GridLogIRL << "Lanczos step " <<k<<std::endl;
|
std::cout<<GridLogDebug << "Lanczos step " <<k<<std::endl;
|
||||||
const RealD tiny = 1.0e-20;
|
const RealD tiny = 1.0e-20;
|
||||||
assert( k< Nm );
|
assert( k< Nm );
|
||||||
|
|
||||||
@ -465,7 +465,7 @@ until convergence
|
|||||||
|
|
||||||
Field& evec_k = evec[k];
|
Field& evec_k = evec[k];
|
||||||
|
|
||||||
_PolyOp(evec_k,w); std::cout<<GridLogIRL << "PolyOp" <<std::endl;
|
_PolyOp(evec_k,w); std::cout<<GridLogDebug << "PolyOp" <<std::endl;
|
||||||
|
|
||||||
if(k>0) w -= lme[k-1] * evec[k-1];
|
if(k>0) w -= lme[k-1] * evec[k-1];
|
||||||
|
|
||||||
@ -480,18 +480,18 @@ until convergence
|
|||||||
lme[k] = beta;
|
lme[k] = beta;
|
||||||
|
|
||||||
if ( (k>0) && ( (k % orth_period) == 0 )) {
|
if ( (k>0) && ( (k % orth_period) == 0 )) {
|
||||||
std::cout<<GridLogIRL << "Orthogonalising " <<k<<std::endl;
|
std::cout<<GridLogDebug << "Orthogonalising " <<k<<std::endl;
|
||||||
orthogonalize(w,evec,k); // orthonormalise
|
orthogonalize(w,evec,k); // orthonormalise
|
||||||
std::cout<<GridLogIRL << "Orthogonalised " <<k<<std::endl;
|
std::cout<<GridLogDebug << "Orthogonalised " <<k<<std::endl;
|
||||||
}
|
}
|
||||||
|
|
||||||
if(k < Nm-1) evec[k+1] = w;
|
if(k < Nm-1) evec[k+1] = w;
|
||||||
|
|
||||||
std::cout<<GridLogIRL << "alpha[" << k << "] = " << zalph << " beta[" << k << "] = "<<beta<<std::endl;
|
std::cout<<GridLogIRL << "Lanczos step alpha[" << k << "] = " << zalph << " beta[" << k << "] = "<<beta<<std::endl;
|
||||||
if ( beta < tiny )
|
if ( beta < tiny )
|
||||||
std::cout<<GridLogIRL << " beta is tiny "<<beta<<std::endl;
|
std::cout<<GridLogIRL << " beta is tiny "<<beta<<std::endl;
|
||||||
|
|
||||||
std::cout<<GridLogIRL << "Lanczos step complete " <<k<<std::endl;
|
std::cout<<GridLogDebug << "Lanczos step complete " <<k<<std::endl;
|
||||||
}
|
}
|
||||||
|
|
||||||
void diagonalize_Eigen(std::vector<RealD>& lmd, std::vector<RealD>& lme,
|
void diagonalize_Eigen(std::vector<RealD>& lmd, std::vector<RealD>& lme,
|
||||||
|
@ -33,7 +33,7 @@ NAMESPACE_BEGIN(Grid);
|
|||||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||||
// Take a matrix and form an NE solver calling a Herm solver
|
// Take a matrix and form an NE solver calling a Herm solver
|
||||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||||
template<class Field> class NormalEquations {
|
template<class Field> class NormalEquations : public LinearFunction<Field>{
|
||||||
private:
|
private:
|
||||||
SparseMatrixBase<Field> & _Matrix;
|
SparseMatrixBase<Field> & _Matrix;
|
||||||
OperatorFunction<Field> & _HermitianSolver;
|
OperatorFunction<Field> & _HermitianSolver;
|
||||||
@ -60,7 +60,7 @@ public:
|
|||||||
}
|
}
|
||||||
};
|
};
|
||||||
|
|
||||||
template<class Field> class HPDSolver {
|
template<class Field> class HPDSolver : public LinearFunction<Field> {
|
||||||
private:
|
private:
|
||||||
LinearOperatorBase<Field> & _Matrix;
|
LinearOperatorBase<Field> & _Matrix;
|
||||||
OperatorFunction<Field> & _HermitianSolver;
|
OperatorFunction<Field> & _HermitianSolver;
|
||||||
@ -78,13 +78,13 @@ public:
|
|||||||
void operator() (const Field &in, Field &out){
|
void operator() (const Field &in, Field &out){
|
||||||
|
|
||||||
_Guess(in,out);
|
_Guess(in,out);
|
||||||
_HermitianSolver(_Matrix,in,out); // Mdag M out = Mdag in
|
_HermitianSolver(_Matrix,in,out); //M out = in
|
||||||
|
|
||||||
}
|
}
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|
||||||
template<class Field> class MdagMSolver {
|
template<class Field> class MdagMSolver : public LinearFunction<Field> {
|
||||||
private:
|
private:
|
||||||
SparseMatrixBase<Field> & _Matrix;
|
SparseMatrixBase<Field> & _Matrix;
|
||||||
OperatorFunction<Field> & _HermitianSolver;
|
OperatorFunction<Field> & _HermitianSolver;
|
||||||
|
@ -20,7 +20,7 @@ template<class Field> class PowerMethod
|
|||||||
RealD evalMaxApprox = 0.0;
|
RealD evalMaxApprox = 0.0;
|
||||||
auto src_n = src;
|
auto src_n = src;
|
||||||
auto tmp = src;
|
auto tmp = src;
|
||||||
const int _MAX_ITER_EST_ = 50;
|
const int _MAX_ITER_EST_ = 100;
|
||||||
|
|
||||||
for (int i=0;i<_MAX_ITER_EST_;i++) {
|
for (int i=0;i<_MAX_ITER_EST_;i++) {
|
||||||
|
|
||||||
|
262
Grid/algorithms/multigrid/Aggregates.h
Normal file
262
Grid/algorithms/multigrid/Aggregates.h
Normal file
@ -0,0 +1,262 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./lib/algorithms/Aggregates.h
|
||||||
|
|
||||||
|
Copyright (C) 2015
|
||||||
|
|
||||||
|
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||||
|
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||||
|
Author: Peter Boyle <peterboyle@Peters-MacBook-Pro-2.local>
|
||||||
|
Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#pragma once
|
||||||
|
|
||||||
|
NAMESPACE_BEGIN(Grid);
|
||||||
|
|
||||||
|
template<class Fobj,class CComplex,int nbasis>
|
||||||
|
class Aggregation {
|
||||||
|
public:
|
||||||
|
typedef iVector<CComplex,nbasis > siteVector;
|
||||||
|
typedef Lattice<siteVector> CoarseVector;
|
||||||
|
typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix;
|
||||||
|
|
||||||
|
typedef Lattice< CComplex > CoarseScalar; // used for inner products on fine field
|
||||||
|
typedef Lattice<Fobj > FineField;
|
||||||
|
|
||||||
|
GridBase *CoarseGrid;
|
||||||
|
GridBase *FineGrid;
|
||||||
|
std::vector<Lattice<Fobj> > subspace;
|
||||||
|
int checkerboard;
|
||||||
|
int Checkerboard(void){return checkerboard;}
|
||||||
|
Aggregation(GridBase *_CoarseGrid,GridBase *_FineGrid,int _checkerboard) :
|
||||||
|
CoarseGrid(_CoarseGrid),
|
||||||
|
FineGrid(_FineGrid),
|
||||||
|
subspace(nbasis,_FineGrid),
|
||||||
|
checkerboard(_checkerboard)
|
||||||
|
{
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
void Orthogonalise(void){
|
||||||
|
CoarseScalar InnerProd(CoarseGrid);
|
||||||
|
// std::cout << GridLogMessage <<" Block Gramm-Schmidt pass 1"<<std::endl;
|
||||||
|
blockOrthogonalise(InnerProd,subspace);
|
||||||
|
}
|
||||||
|
void ProjectToSubspace(CoarseVector &CoarseVec,const FineField &FineVec){
|
||||||
|
blockProject(CoarseVec,FineVec,subspace);
|
||||||
|
}
|
||||||
|
void PromoteFromSubspace(const CoarseVector &CoarseVec,FineField &FineVec){
|
||||||
|
FineVec.Checkerboard() = subspace[0].Checkerboard();
|
||||||
|
blockPromote(CoarseVec,FineVec,subspace);
|
||||||
|
}
|
||||||
|
|
||||||
|
virtual void CreateSubspaceRandom(GridParallelRNG &RNG) {
|
||||||
|
int nn=nbasis;
|
||||||
|
RealD scale;
|
||||||
|
FineField noise(FineGrid);
|
||||||
|
for(int b=0;b<nn;b++){
|
||||||
|
subspace[b] = Zero();
|
||||||
|
gaussian(RNG,noise);
|
||||||
|
scale = std::pow(norm2(noise),-0.5);
|
||||||
|
noise=noise*scale;
|
||||||
|
subspace[b] = noise;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
virtual void CreateSubspace(GridParallelRNG &RNG,LinearOperatorBase<FineField> &hermop,int nn=nbasis)
|
||||||
|
{
|
||||||
|
|
||||||
|
RealD scale;
|
||||||
|
|
||||||
|
ConjugateGradient<FineField> CG(1.0e-2,100,false);
|
||||||
|
FineField noise(FineGrid);
|
||||||
|
FineField Mn(FineGrid);
|
||||||
|
|
||||||
|
for(int b=0;b<nn;b++){
|
||||||
|
|
||||||
|
subspace[b] = Zero();
|
||||||
|
gaussian(RNG,noise);
|
||||||
|
scale = std::pow(norm2(noise),-0.5);
|
||||||
|
noise=noise*scale;
|
||||||
|
|
||||||
|
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise ["<<b<<"] <n|MdagM|n> "<<norm2(Mn)<<std::endl;
|
||||||
|
|
||||||
|
for(int i=0;i<1;i++){
|
||||||
|
|
||||||
|
CG(hermop,noise,subspace[b]);
|
||||||
|
|
||||||
|
noise = subspace[b];
|
||||||
|
scale = std::pow(norm2(noise),-0.5);
|
||||||
|
noise=noise*scale;
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
|
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "filtered["<<b<<"] <f|MdagM|f> "<<norm2(Mn)<<std::endl;
|
||||||
|
subspace[b] = noise;
|
||||||
|
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////////////////////////////////////////
|
||||||
|
// World of possibilities here. But have tried quite a lot of experiments (250+ jobs run on Summit)
|
||||||
|
// and this is the best I found
|
||||||
|
////////////////////////////////////////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
virtual void CreateSubspaceChebyshev(GridParallelRNG &RNG,LinearOperatorBase<FineField> &hermop,
|
||||||
|
int nn,
|
||||||
|
double hi,
|
||||||
|
double lo,
|
||||||
|
int orderfilter,
|
||||||
|
int ordermin,
|
||||||
|
int orderstep,
|
||||||
|
double filterlo
|
||||||
|
) {
|
||||||
|
|
||||||
|
RealD scale;
|
||||||
|
|
||||||
|
FineField noise(FineGrid);
|
||||||
|
FineField Mn(FineGrid);
|
||||||
|
FineField tmp(FineGrid);
|
||||||
|
|
||||||
|
// New normalised noise
|
||||||
|
gaussian(RNG,noise);
|
||||||
|
scale = std::pow(norm2(noise),-0.5);
|
||||||
|
noise=noise*scale;
|
||||||
|
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev subspace pass-1 : ord "<<orderfilter<<" ["<<lo<<","<<hi<<"]"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev subspace pass-2 : nbasis"<<nn<<" min "
|
||||||
|
<<ordermin<<" step "<<orderstep
|
||||||
|
<<" lo"<<filterlo<<std::endl;
|
||||||
|
|
||||||
|
// Initial matrix element
|
||||||
|
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl;
|
||||||
|
|
||||||
|
int b =0;
|
||||||
|
{
|
||||||
|
// Filter
|
||||||
|
Chebyshev<FineField> Cheb(lo,hi,orderfilter);
|
||||||
|
Cheb(hermop,noise,Mn);
|
||||||
|
// normalise
|
||||||
|
scale = std::pow(norm2(Mn),-0.5); Mn=Mn*scale;
|
||||||
|
subspace[b] = Mn;
|
||||||
|
hermop.Op(Mn,tmp);
|
||||||
|
std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
|
||||||
|
b++;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Generate a full sequence of Chebyshevs
|
||||||
|
{
|
||||||
|
lo=filterlo;
|
||||||
|
noise=Mn;
|
||||||
|
|
||||||
|
FineField T0(FineGrid); T0 = noise;
|
||||||
|
FineField T1(FineGrid);
|
||||||
|
FineField T2(FineGrid);
|
||||||
|
FineField y(FineGrid);
|
||||||
|
|
||||||
|
FineField *Tnm = &T0;
|
||||||
|
FineField *Tn = &T1;
|
||||||
|
FineField *Tnp = &T2;
|
||||||
|
|
||||||
|
// Tn=T1 = (xscale M + mscale)in
|
||||||
|
RealD xscale = 2.0/(hi-lo);
|
||||||
|
RealD mscale = -(hi+lo)/(hi-lo);
|
||||||
|
hermop.HermOp(T0,y);
|
||||||
|
T1=y*xscale+noise*mscale;
|
||||||
|
|
||||||
|
for(int n=2;n<=ordermin+orderstep*(nn-2);n++){
|
||||||
|
|
||||||
|
hermop.HermOp(*Tn,y);
|
||||||
|
|
||||||
|
autoView( y_v , y, AcceleratorWrite);
|
||||||
|
autoView( Tn_v , (*Tn), AcceleratorWrite);
|
||||||
|
autoView( Tnp_v , (*Tnp), AcceleratorWrite);
|
||||||
|
autoView( Tnm_v , (*Tnm), AcceleratorWrite);
|
||||||
|
const int Nsimd = CComplex::Nsimd();
|
||||||
|
accelerator_for(ss, FineGrid->oSites(), Nsimd, {
|
||||||
|
coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss));
|
||||||
|
coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss));
|
||||||
|
});
|
||||||
|
|
||||||
|
// Possible more fine grained control is needed than a linear sweep,
|
||||||
|
// but huge productivity gain if this is simple algorithm and not a tunable
|
||||||
|
int m =1;
|
||||||
|
if ( n>=ordermin ) m=n-ordermin;
|
||||||
|
if ( (m%orderstep)==0 ) {
|
||||||
|
Mn=*Tnp;
|
||||||
|
scale = std::pow(norm2(Mn),-0.5); Mn=Mn*scale;
|
||||||
|
subspace[b] = Mn;
|
||||||
|
hermop.Op(Mn,tmp);
|
||||||
|
std::cout<<GridLogMessage << n<<" filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
|
||||||
|
b++;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Cycle pointers to avoid copies
|
||||||
|
FineField *swizzle = Tnm;
|
||||||
|
Tnm =Tn;
|
||||||
|
Tn =Tnp;
|
||||||
|
Tnp =swizzle;
|
||||||
|
|
||||||
|
}
|
||||||
|
}
|
||||||
|
assert(b==nn);
|
||||||
|
}
|
||||||
|
virtual void CreateSubspaceChebyshev(GridParallelRNG &RNG,LinearOperatorBase<FineField> &hermop,
|
||||||
|
int nn,
|
||||||
|
double hi,
|
||||||
|
double lo,
|
||||||
|
int orderfilter
|
||||||
|
) {
|
||||||
|
|
||||||
|
RealD scale;
|
||||||
|
|
||||||
|
FineField noise(FineGrid);
|
||||||
|
FineField Mn(FineGrid);
|
||||||
|
FineField tmp(FineGrid);
|
||||||
|
|
||||||
|
// New normalised noise
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev subspace pure noise : ord "<<orderfilter<<" ["<<lo<<","<<hi<<"]"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev subspace pure noise : nbasis "<<nn<<std::endl;
|
||||||
|
|
||||||
|
|
||||||
|
for(int b =0;b<nbasis;b++)
|
||||||
|
{
|
||||||
|
gaussian(RNG,noise);
|
||||||
|
scale = std::pow(norm2(noise),-0.5);
|
||||||
|
noise=noise*scale;
|
||||||
|
|
||||||
|
// Initial matrix element
|
||||||
|
hermop.Op(noise,Mn);
|
||||||
|
if(b==0) std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl;
|
||||||
|
// Filter
|
||||||
|
Chebyshev<FineField> Cheb(lo,hi,orderfilter);
|
||||||
|
Cheb(hermop,noise,Mn);
|
||||||
|
// normalise
|
||||||
|
scale = std::pow(norm2(Mn),-0.5); Mn=Mn*scale;
|
||||||
|
subspace[b] = Mn;
|
||||||
|
hermop.Op(Mn,tmp);
|
||||||
|
std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
|
};
|
||||||
|
NAMESPACE_END(Grid);
|
@ -56,243 +56,6 @@ inline void blockMaskedInnerProduct(Lattice<CComplex> &CoarseInner,
|
|||||||
blockSum(CoarseInner,fine_inner_msk);
|
blockSum(CoarseInner,fine_inner_msk);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
class Geometry {
|
|
||||||
public:
|
|
||||||
int npoint;
|
|
||||||
int base;
|
|
||||||
std::vector<int> directions ;
|
|
||||||
std::vector<int> displacements;
|
|
||||||
std::vector<int> points_dagger;
|
|
||||||
|
|
||||||
Geometry(int _d) {
|
|
||||||
|
|
||||||
base = (_d==5) ? 1:0;
|
|
||||||
|
|
||||||
// make coarse grid stencil for 4d , not 5d
|
|
||||||
if ( _d==5 ) _d=4;
|
|
||||||
|
|
||||||
npoint = 2*_d+1;
|
|
||||||
directions.resize(npoint);
|
|
||||||
displacements.resize(npoint);
|
|
||||||
points_dagger.resize(npoint);
|
|
||||||
for(int d=0;d<_d;d++){
|
|
||||||
directions[d ] = d+base;
|
|
||||||
directions[d+_d] = d+base;
|
|
||||||
displacements[d ] = +1;
|
|
||||||
displacements[d+_d]= -1;
|
|
||||||
points_dagger[d ] = d+_d;
|
|
||||||
points_dagger[d+_d] = d;
|
|
||||||
}
|
|
||||||
directions [2*_d]=0;
|
|
||||||
displacements[2*_d]=0;
|
|
||||||
points_dagger[2*_d]=2*_d;
|
|
||||||
}
|
|
||||||
|
|
||||||
int point(int dir, int disp) {
|
|
||||||
assert(disp == -1 || disp == 0 || disp == 1);
|
|
||||||
assert(base+0 <= dir && dir < base+4);
|
|
||||||
|
|
||||||
// directions faster index = new indexing
|
|
||||||
// 4d (base = 0):
|
|
||||||
// point 0 1 2 3 4 5 6 7 8
|
|
||||||
// dir 0 1 2 3 0 1 2 3 0
|
|
||||||
// disp +1 +1 +1 +1 -1 -1 -1 -1 0
|
|
||||||
// 5d (base = 1):
|
|
||||||
// point 0 1 2 3 4 5 6 7 8
|
|
||||||
// dir 1 2 3 4 1 2 3 4 0
|
|
||||||
// disp +1 +1 +1 +1 -1 -1 -1 -1 0
|
|
||||||
|
|
||||||
// displacements faster index = old indexing
|
|
||||||
// 4d (base = 0):
|
|
||||||
// point 0 1 2 3 4 5 6 7 8
|
|
||||||
// dir 0 0 1 1 2 2 3 3 0
|
|
||||||
// disp +1 -1 +1 -1 +1 -1 +1 -1 0
|
|
||||||
// 5d (base = 1):
|
|
||||||
// point 0 1 2 3 4 5 6 7 8
|
|
||||||
// dir 1 1 2 2 3 3 4 4 0
|
|
||||||
// disp +1 -1 +1 -1 +1 -1 +1 -1 0
|
|
||||||
|
|
||||||
if(dir == 0 and disp == 0)
|
|
||||||
return 8;
|
|
||||||
else // New indexing
|
|
||||||
return (1 - disp) / 2 * 4 + dir - base;
|
|
||||||
// else // Old indexing
|
|
||||||
// return (4 * (dir - base) + 1 - disp) / 2;
|
|
||||||
}
|
|
||||||
};
|
|
||||||
|
|
||||||
template<class Fobj,class CComplex,int nbasis>
|
|
||||||
class Aggregation {
|
|
||||||
public:
|
|
||||||
typedef iVector<CComplex,nbasis > siteVector;
|
|
||||||
typedef Lattice<siteVector> CoarseVector;
|
|
||||||
typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix;
|
|
||||||
|
|
||||||
typedef Lattice< CComplex > CoarseScalar; // used for inner products on fine field
|
|
||||||
typedef Lattice<Fobj > FineField;
|
|
||||||
|
|
||||||
GridBase *CoarseGrid;
|
|
||||||
GridBase *FineGrid;
|
|
||||||
std::vector<Lattice<Fobj> > subspace;
|
|
||||||
int checkerboard;
|
|
||||||
int Checkerboard(void){return checkerboard;}
|
|
||||||
Aggregation(GridBase *_CoarseGrid,GridBase *_FineGrid,int _checkerboard) :
|
|
||||||
CoarseGrid(_CoarseGrid),
|
|
||||||
FineGrid(_FineGrid),
|
|
||||||
subspace(nbasis,_FineGrid),
|
|
||||||
checkerboard(_checkerboard)
|
|
||||||
{
|
|
||||||
};
|
|
||||||
|
|
||||||
void Orthogonalise(void){
|
|
||||||
CoarseScalar InnerProd(CoarseGrid);
|
|
||||||
std::cout << GridLogMessage <<" Block Gramm-Schmidt pass 1"<<std::endl;
|
|
||||||
blockOrthogonalise(InnerProd,subspace);
|
|
||||||
}
|
|
||||||
void ProjectToSubspace(CoarseVector &CoarseVec,const FineField &FineVec){
|
|
||||||
blockProject(CoarseVec,FineVec,subspace);
|
|
||||||
}
|
|
||||||
void PromoteFromSubspace(const CoarseVector &CoarseVec,FineField &FineVec){
|
|
||||||
FineVec.Checkerboard() = subspace[0].Checkerboard();
|
|
||||||
blockPromote(CoarseVec,FineVec,subspace);
|
|
||||||
}
|
|
||||||
|
|
||||||
virtual void CreateSubspace(GridParallelRNG &RNG,LinearOperatorBase<FineField> &hermop,int nn=nbasis) {
|
|
||||||
|
|
||||||
RealD scale;
|
|
||||||
|
|
||||||
ConjugateGradient<FineField> CG(1.0e-2,100,false);
|
|
||||||
FineField noise(FineGrid);
|
|
||||||
FineField Mn(FineGrid);
|
|
||||||
|
|
||||||
for(int b=0;b<nn;b++){
|
|
||||||
|
|
||||||
subspace[b] = Zero();
|
|
||||||
gaussian(RNG,noise);
|
|
||||||
scale = std::pow(norm2(noise),-0.5);
|
|
||||||
noise=noise*scale;
|
|
||||||
|
|
||||||
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise ["<<b<<"] <n|MdagM|n> "<<norm2(Mn)<<std::endl;
|
|
||||||
|
|
||||||
for(int i=0;i<1;i++){
|
|
||||||
|
|
||||||
CG(hermop,noise,subspace[b]);
|
|
||||||
|
|
||||||
noise = subspace[b];
|
|
||||||
scale = std::pow(norm2(noise),-0.5);
|
|
||||||
noise=noise*scale;
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "filtered["<<b<<"] <f|MdagM|f> "<<norm2(Mn)<<std::endl;
|
|
||||||
subspace[b] = noise;
|
|
||||||
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
////////////////////////////////////////////////////////////////////////////////////////////////
|
|
||||||
// World of possibilities here. But have tried quite a lot of experiments (250+ jobs run on Summit)
|
|
||||||
// and this is the best I found
|
|
||||||
////////////////////////////////////////////////////////////////////////////////////////////////
|
|
||||||
|
|
||||||
virtual void CreateSubspaceChebyshev(GridParallelRNG &RNG,LinearOperatorBase<FineField> &hermop,
|
|
||||||
int nn,
|
|
||||||
double hi,
|
|
||||||
double lo,
|
|
||||||
int orderfilter,
|
|
||||||
int ordermin,
|
|
||||||
int orderstep,
|
|
||||||
double filterlo
|
|
||||||
) {
|
|
||||||
|
|
||||||
RealD scale;
|
|
||||||
|
|
||||||
FineField noise(FineGrid);
|
|
||||||
FineField Mn(FineGrid);
|
|
||||||
FineField tmp(FineGrid);
|
|
||||||
|
|
||||||
// New normalised noise
|
|
||||||
gaussian(RNG,noise);
|
|
||||||
scale = std::pow(norm2(noise),-0.5);
|
|
||||||
noise=noise*scale;
|
|
||||||
|
|
||||||
// Initial matrix element
|
|
||||||
hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl;
|
|
||||||
|
|
||||||
int b =0;
|
|
||||||
{
|
|
||||||
// Filter
|
|
||||||
Chebyshev<FineField> Cheb(lo,hi,orderfilter);
|
|
||||||
Cheb(hermop,noise,Mn);
|
|
||||||
// normalise
|
|
||||||
scale = std::pow(norm2(Mn),-0.5); Mn=Mn*scale;
|
|
||||||
subspace[b] = Mn;
|
|
||||||
hermop.Op(Mn,tmp);
|
|
||||||
std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
|
|
||||||
b++;
|
|
||||||
}
|
|
||||||
|
|
||||||
// Generate a full sequence of Chebyshevs
|
|
||||||
{
|
|
||||||
lo=filterlo;
|
|
||||||
noise=Mn;
|
|
||||||
|
|
||||||
FineField T0(FineGrid); T0 = noise;
|
|
||||||
FineField T1(FineGrid);
|
|
||||||
FineField T2(FineGrid);
|
|
||||||
FineField y(FineGrid);
|
|
||||||
|
|
||||||
FineField *Tnm = &T0;
|
|
||||||
FineField *Tn = &T1;
|
|
||||||
FineField *Tnp = &T2;
|
|
||||||
|
|
||||||
// Tn=T1 = (xscale M + mscale)in
|
|
||||||
RealD xscale = 2.0/(hi-lo);
|
|
||||||
RealD mscale = -(hi+lo)/(hi-lo);
|
|
||||||
hermop.HermOp(T0,y);
|
|
||||||
T1=y*xscale+noise*mscale;
|
|
||||||
|
|
||||||
for(int n=2;n<=ordermin+orderstep*(nn-2);n++){
|
|
||||||
|
|
||||||
hermop.HermOp(*Tn,y);
|
|
||||||
|
|
||||||
autoView( y_v , y, AcceleratorWrite);
|
|
||||||
autoView( Tn_v , (*Tn), AcceleratorWrite);
|
|
||||||
autoView( Tnp_v , (*Tnp), AcceleratorWrite);
|
|
||||||
autoView( Tnm_v , (*Tnm), AcceleratorWrite);
|
|
||||||
const int Nsimd = CComplex::Nsimd();
|
|
||||||
accelerator_for(ss, FineGrid->oSites(), Nsimd, {
|
|
||||||
coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss));
|
|
||||||
coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss));
|
|
||||||
});
|
|
||||||
|
|
||||||
// Possible more fine grained control is needed than a linear sweep,
|
|
||||||
// but huge productivity gain if this is simple algorithm and not a tunable
|
|
||||||
int m =1;
|
|
||||||
if ( n>=ordermin ) m=n-ordermin;
|
|
||||||
if ( (m%orderstep)==0 ) {
|
|
||||||
Mn=*Tnp;
|
|
||||||
scale = std::pow(norm2(Mn),-0.5); Mn=Mn*scale;
|
|
||||||
subspace[b] = Mn;
|
|
||||||
hermop.Op(Mn,tmp);
|
|
||||||
std::cout<<GridLogMessage << n<<" filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
|
|
||||||
b++;
|
|
||||||
}
|
|
||||||
|
|
||||||
// Cycle pointers to avoid copies
|
|
||||||
FineField *swizzle = Tnm;
|
|
||||||
Tnm =Tn;
|
|
||||||
Tn =Tnp;
|
|
||||||
Tnp =swizzle;
|
|
||||||
|
|
||||||
}
|
|
||||||
}
|
|
||||||
assert(b==nn);
|
|
||||||
}
|
|
||||||
|
|
||||||
};
|
|
||||||
|
|
||||||
// Fine Object == (per site) type of fine field
|
// Fine Object == (per site) type of fine field
|
||||||
// nbasis == number of deflation vectors
|
// nbasis == number of deflation vectors
|
||||||
template<class Fobj,class CComplex,int nbasis>
|
template<class Fobj,class CComplex,int nbasis>
|
449
Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h
Normal file
449
Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h
Normal file
@ -0,0 +1,449 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./lib/algorithms/GeneralCoarsenedMatrix.h
|
||||||
|
|
||||||
|
Copyright (C) 2015
|
||||||
|
|
||||||
|
Author: Peter Boyle <pboyle@bnl.gov>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#pragma once
|
||||||
|
|
||||||
|
#include <Grid/qcd/QCD.h> // needed for Dagger(Yes|No), Inverse(Yes|No)
|
||||||
|
|
||||||
|
#include <Grid/lattice/PaddedCell.h>
|
||||||
|
#include <Grid/stencil/GeneralLocalStencil.h>
|
||||||
|
|
||||||
|
NAMESPACE_BEGIN(Grid);
|
||||||
|
|
||||||
|
// Fine Object == (per site) type of fine field
|
||||||
|
// nbasis == number of deflation vectors
|
||||||
|
template<class Fobj,class CComplex,int nbasis>
|
||||||
|
class GeneralCoarsenedMatrix : public SparseMatrixBase<Lattice<iVector<CComplex,nbasis > > > {
|
||||||
|
public:
|
||||||
|
|
||||||
|
typedef GeneralCoarsenedMatrix<Fobj,CComplex,nbasis> GeneralCoarseOp;
|
||||||
|
typedef iVector<CComplex,nbasis > siteVector;
|
||||||
|
typedef iMatrix<CComplex,nbasis > siteMatrix;
|
||||||
|
typedef Lattice<iScalar<CComplex> > CoarseComplexField;
|
||||||
|
typedef Lattice<siteVector> CoarseVector;
|
||||||
|
typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix;
|
||||||
|
typedef iMatrix<CComplex,nbasis > Cobj;
|
||||||
|
typedef iVector<CComplex,nbasis > Cvec;
|
||||||
|
typedef Lattice< CComplex > CoarseScalar; // used for inner products on fine field
|
||||||
|
typedef Lattice<Fobj > FineField;
|
||||||
|
typedef CoarseVector Field;
|
||||||
|
////////////////////
|
||||||
|
// Data members
|
||||||
|
////////////////////
|
||||||
|
int hermitian;
|
||||||
|
GridBase * _FineGrid;
|
||||||
|
GridCartesian * _CoarseGrid;
|
||||||
|
NonLocalStencilGeometry &geom;
|
||||||
|
PaddedCell Cell;
|
||||||
|
GeneralLocalStencil Stencil;
|
||||||
|
|
||||||
|
std::vector<CoarseMatrix> _A;
|
||||||
|
std::vector<CoarseMatrix> _Adag;
|
||||||
|
std::vector<CoarseVector> MultTemporaries;
|
||||||
|
|
||||||
|
///////////////////////
|
||||||
|
// Interface
|
||||||
|
///////////////////////
|
||||||
|
GridBase * Grid(void) { return _FineGrid; }; // this is all the linalg routines need to know
|
||||||
|
GridBase * FineGrid(void) { return _FineGrid; }; // this is all the linalg routines need to know
|
||||||
|
GridCartesian * CoarseGrid(void) { return _CoarseGrid; }; // this is all the linalg routines need to know
|
||||||
|
|
||||||
|
void ProjectNearestNeighbour(RealD shift, GeneralCoarseOp &CopyMe)
|
||||||
|
{
|
||||||
|
int nfound=0;
|
||||||
|
std::cout << GridLogMessage <<"GeneralCoarsenedMatrix::ProjectNearestNeighbour "<< CopyMe._A[0].Grid()<<std::endl;
|
||||||
|
for(int p=0;p<geom.npoint;p++){
|
||||||
|
for(int pp=0;pp<CopyMe.geom.npoint;pp++){
|
||||||
|
// Search for the same relative shift
|
||||||
|
// Avoids brutal handling of Grid pointers
|
||||||
|
if ( CopyMe.geom.shifts[pp]==geom.shifts[p] ) {
|
||||||
|
_A[p] = CopyMe.Cell.Extract(CopyMe._A[pp]);
|
||||||
|
_Adag[p] = CopyMe.Cell.Extract(CopyMe._Adag[pp]);
|
||||||
|
nfound++;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
assert(nfound==geom.npoint);
|
||||||
|
ExchangeCoarseLinks();
|
||||||
|
}
|
||||||
|
|
||||||
|
GeneralCoarsenedMatrix(NonLocalStencilGeometry &_geom,GridBase *FineGrid, GridCartesian * CoarseGrid)
|
||||||
|
: geom(_geom),
|
||||||
|
_FineGrid(FineGrid),
|
||||||
|
_CoarseGrid(CoarseGrid),
|
||||||
|
hermitian(1),
|
||||||
|
Cell(_geom.Depth(),_CoarseGrid),
|
||||||
|
Stencil(Cell.grids.back(),geom.shifts)
|
||||||
|
{
|
||||||
|
{
|
||||||
|
int npoint = _geom.npoint;
|
||||||
|
autoView( Stencil_v , Stencil, AcceleratorRead);
|
||||||
|
int osites=Stencil.Grid()->oSites();
|
||||||
|
for(int ss=0;ss<osites;ss++){
|
||||||
|
for(int point=0;point<npoint;point++){
|
||||||
|
auto SE = Stencil_v.GetEntry(point,ss);
|
||||||
|
int o = SE->_offset;
|
||||||
|
assert( o< osites);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
_A.resize(geom.npoint,CoarseGrid);
|
||||||
|
_Adag.resize(geom.npoint,CoarseGrid);
|
||||||
|
}
|
||||||
|
void M (const CoarseVector &in, CoarseVector &out)
|
||||||
|
{
|
||||||
|
Mult(_A,in,out);
|
||||||
|
}
|
||||||
|
void Mdag (const CoarseVector &in, CoarseVector &out)
|
||||||
|
{
|
||||||
|
if ( hermitian ) M(in,out);
|
||||||
|
else Mult(_Adag,in,out);
|
||||||
|
}
|
||||||
|
void Mult (std::vector<CoarseMatrix> &A,const CoarseVector &in, CoarseVector &out)
|
||||||
|
{
|
||||||
|
RealD tviews=0; RealD ttot=0; RealD tmult=0; RealD texch=0; RealD text=0; RealD ttemps=0; RealD tcopy=0;
|
||||||
|
|
||||||
|
ttot=-usecond();
|
||||||
|
conformable(CoarseGrid(),in.Grid());
|
||||||
|
conformable(in.Grid(),out.Grid());
|
||||||
|
out.Checkerboard() = in.Checkerboard();
|
||||||
|
CoarseVector tin=in;
|
||||||
|
|
||||||
|
texch-=usecond();
|
||||||
|
CoarseVector pin = Cell.ExchangePeriodic(tin);
|
||||||
|
texch+=usecond();
|
||||||
|
|
||||||
|
CoarseVector pout(pin.Grid());
|
||||||
|
|
||||||
|
int npoint = geom.npoint;
|
||||||
|
typedef LatticeView<Cobj> Aview;
|
||||||
|
typedef LatticeView<Cvec> Vview;
|
||||||
|
|
||||||
|
const int Nsimd = CComplex::Nsimd();
|
||||||
|
|
||||||
|
int64_t osites=pin.Grid()->oSites();
|
||||||
|
|
||||||
|
RealD flops = 1.0* npoint * nbasis * nbasis * 8.0 * osites * CComplex::Nsimd();
|
||||||
|
RealD bytes = 1.0*osites*sizeof(siteMatrix)*npoint
|
||||||
|
+ 2.0*osites*sizeof(siteVector)*npoint;
|
||||||
|
|
||||||
|
{
|
||||||
|
tviews-=usecond();
|
||||||
|
autoView( in_v , pin, AcceleratorRead);
|
||||||
|
autoView( out_v , pout, AcceleratorWriteDiscard);
|
||||||
|
autoView( Stencil_v , Stencil, AcceleratorRead);
|
||||||
|
tviews+=usecond();
|
||||||
|
|
||||||
|
// Static and prereserve to keep UVM region live and not resized across multiple calls
|
||||||
|
ttemps-=usecond();
|
||||||
|
MultTemporaries.resize(npoint,pin.Grid());
|
||||||
|
ttemps+=usecond();
|
||||||
|
std::vector<Aview> AcceleratorViewContainer_h;
|
||||||
|
std::vector<Vview> AcceleratorVecViewContainer_h;
|
||||||
|
|
||||||
|
tviews-=usecond();
|
||||||
|
for(int p=0;p<npoint;p++) {
|
||||||
|
AcceleratorViewContainer_h.push_back( A[p].View(AcceleratorRead));
|
||||||
|
AcceleratorVecViewContainer_h.push_back(MultTemporaries[p].View(AcceleratorWrite));
|
||||||
|
}
|
||||||
|
tviews+=usecond();
|
||||||
|
|
||||||
|
static deviceVector<Aview> AcceleratorViewContainer; AcceleratorViewContainer.resize(npoint);
|
||||||
|
static deviceVector<Vview> AcceleratorVecViewContainer; AcceleratorVecViewContainer.resize(npoint);
|
||||||
|
|
||||||
|
auto Aview_p = &AcceleratorViewContainer[0];
|
||||||
|
auto Vview_p = &AcceleratorVecViewContainer[0];
|
||||||
|
tcopy-=usecond();
|
||||||
|
acceleratorCopyToDevice(&AcceleratorViewContainer_h[0],&AcceleratorViewContainer[0],npoint *sizeof(Aview));
|
||||||
|
acceleratorCopyToDevice(&AcceleratorVecViewContainer_h[0],&AcceleratorVecViewContainer[0],npoint *sizeof(Vview));
|
||||||
|
tcopy+=usecond();
|
||||||
|
|
||||||
|
tmult-=usecond();
|
||||||
|
accelerator_for(spb, osites*nbasis*npoint, Nsimd, {
|
||||||
|
typedef decltype(coalescedRead(in_v[0](0))) calcComplex;
|
||||||
|
int32_t ss = spb/(nbasis*npoint);
|
||||||
|
int32_t bp = spb%(nbasis*npoint);
|
||||||
|
int32_t b = bp/npoint;
|
||||||
|
int32_t point= bp%npoint;
|
||||||
|
auto SE = Stencil_v.GetEntry(point,ss);
|
||||||
|
auto nbr = coalescedReadGeneralPermute(in_v[SE->_offset],SE->_permute,Nd);
|
||||||
|
auto res = coalescedRead(Aview_p[point][ss](b,0))*nbr(0);
|
||||||
|
for(int bb=1;bb<nbasis;bb++) {
|
||||||
|
res = res + coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb);
|
||||||
|
}
|
||||||
|
coalescedWrite(Vview_p[point][ss](b),res);
|
||||||
|
});
|
||||||
|
accelerator_for(sb, osites*nbasis, Nsimd, {
|
||||||
|
int ss = sb/nbasis;
|
||||||
|
int b = sb%nbasis;
|
||||||
|
auto res = coalescedRead(Vview_p[0][ss](b));
|
||||||
|
for(int point=1;point<npoint;point++){
|
||||||
|
res = res + coalescedRead(Vview_p[point][ss](b));
|
||||||
|
}
|
||||||
|
coalescedWrite(out_v[ss](b),res);
|
||||||
|
});
|
||||||
|
tmult+=usecond();
|
||||||
|
for(int p=0;p<npoint;p++) {
|
||||||
|
AcceleratorViewContainer_h[p].ViewClose();
|
||||||
|
AcceleratorVecViewContainer_h[p].ViewClose();
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
text-=usecond();
|
||||||
|
out = Cell.Extract(pout);
|
||||||
|
text+=usecond();
|
||||||
|
ttot+=usecond();
|
||||||
|
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult Aviews "<<tviews<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult exch "<<texch<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult mult "<<tmult<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult ext "<<text<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult temps "<<ttemps<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult copy "<<tcopy<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance<<"Coarse Mult tot "<<ttot<<" us"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance<<"Coarse Kernel flop/s "<< flops/tmult<<" mflop/s"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance<<"Coarse Kernel bytes/s"<< bytes/tmult<<" MB/s"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance<<"Coarse overall flops/s "<< flops/ttot<<" mflop/s"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance<<"Coarse total bytes "<< bytes/1e6<<" MB"<<std::endl;
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
void PopulateAdag(void)
|
||||||
|
{
|
||||||
|
for(int64_t bidx=0;bidx<CoarseGrid()->gSites() ;bidx++){
|
||||||
|
Coordinate bcoor;
|
||||||
|
CoarseGrid()->GlobalIndexToGlobalCoor(bidx,bcoor);
|
||||||
|
|
||||||
|
for(int p=0;p<geom.npoint;p++){
|
||||||
|
Coordinate scoor = bcoor;
|
||||||
|
for(int mu=0;mu<bcoor.size();mu++){
|
||||||
|
int L = CoarseGrid()->GlobalDimensions()[mu];
|
||||||
|
scoor[mu] = (bcoor[mu] - geom.shifts[p][mu] + L) % L; // Modulo arithmetic
|
||||||
|
}
|
||||||
|
// Flip to poke/peekLocalSite and not too bad
|
||||||
|
auto link = peekSite(_A[p],scoor);
|
||||||
|
int pp = geom.Reverse(p);
|
||||||
|
pokeSite(adj(link),_Adag[pp],bcoor);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
/////////////////////////////////////////////////////////////
|
||||||
|
//
|
||||||
|
// A) Only reduced flops option is to use a padded cell of depth 4
|
||||||
|
// and apply MpcDagMpc in the padded cell.
|
||||||
|
//
|
||||||
|
// Makes for ONE application of MpcDagMpc per vector instead of 30 or 80.
|
||||||
|
// With the effective cell size around (B+8)^4 perhaps 12^4/4^4 ratio
|
||||||
|
// Cost is 81x more, same as stencil size.
|
||||||
|
//
|
||||||
|
// But: can eliminate comms and do as local dirichlet.
|
||||||
|
//
|
||||||
|
// Local exchange gauge field once.
|
||||||
|
// Apply to all vectors, local only computation.
|
||||||
|
// Must exchange ghost subcells in reverse process of PaddedCell to take inner products
|
||||||
|
//
|
||||||
|
// B) Can reduce cost: pad by 1, apply Deo (4^4+6^4+8^4+8^4 )/ (4x 4^4)
|
||||||
|
// pad by 2, apply Doe
|
||||||
|
// pad by 3, apply Deo
|
||||||
|
// then break out 8x directions; cost is ~10x MpcDagMpc per vector
|
||||||
|
//
|
||||||
|
// => almost factor of 10 in setup cost, excluding data rearrangement
|
||||||
|
//
|
||||||
|
// Intermediates -- ignore the corner terms, leave approximate and force Hermitian
|
||||||
|
// Intermediates -- pad by 2 and apply 1+8+24 = 33 times.
|
||||||
|
/////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
//////////////////////////////////////////////////////////
|
||||||
|
// BFM HDCG style approach: Solve a system of equations to get Aij
|
||||||
|
//////////////////////////////////////////////////////////
|
||||||
|
/*
|
||||||
|
* Here, k,l index which possible shift within the 3^Nd "ball" connected by MdagM.
|
||||||
|
*
|
||||||
|
* conj(phases[block]) proj[k][ block*Nvec+j ] = \sum_ball e^{i q_k . delta} < phi_{block,j} | MdagM | phi_{(block+delta),i} >
|
||||||
|
* = \sum_ball e^{iqk.delta} A_ji
|
||||||
|
*
|
||||||
|
* Must invert matrix M_k,l = e^[i q_k . delta_l]
|
||||||
|
*
|
||||||
|
* Where q_k = delta_k . (2*M_PI/global_nb[mu])
|
||||||
|
*/
|
||||||
|
void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop,
|
||||||
|
Aggregation<Fobj,CComplex,nbasis> & Subspace)
|
||||||
|
{
|
||||||
|
std::cout << GridLogMessage<< "GeneralCoarsenMatrix "<< std::endl;
|
||||||
|
GridBase *grid = FineGrid();
|
||||||
|
|
||||||
|
RealD tproj=0.0;
|
||||||
|
RealD teigen=0.0;
|
||||||
|
RealD tmat=0.0;
|
||||||
|
RealD tphase=0.0;
|
||||||
|
RealD tinv=0.0;
|
||||||
|
|
||||||
|
/////////////////////////////////////////////////////////////
|
||||||
|
// Orthogonalise the subblocks over the basis
|
||||||
|
/////////////////////////////////////////////////////////////
|
||||||
|
CoarseScalar InnerProd(CoarseGrid());
|
||||||
|
blockOrthogonalise(InnerProd,Subspace.subspace);
|
||||||
|
|
||||||
|
const int npoint = geom.npoint;
|
||||||
|
|
||||||
|
Coordinate clatt = CoarseGrid()->GlobalDimensions();
|
||||||
|
int Nd = CoarseGrid()->Nd();
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Here, k,l index which possible momentum/shift within the N-points connected by MdagM.
|
||||||
|
* Matrix index i is mapped to this shift via
|
||||||
|
* geom.shifts[i]
|
||||||
|
*
|
||||||
|
* conj(pha[block]) proj[k (which mom)][j (basis vec cpt)][block]
|
||||||
|
* = \sum_{l in ball} e^{i q_k . delta_l} < phi_{block,j} | MdagM | phi_{(block+delta_l),i} >
|
||||||
|
* = \sum_{l in ball} e^{iqk.delta_l} A_ji^{b.b+l}
|
||||||
|
* = M_{kl} A_ji^{b.b+l}
|
||||||
|
*
|
||||||
|
* Must assemble and invert matrix M_k,l = e^[i q_k . delta_l]
|
||||||
|
*
|
||||||
|
* Where q_k = delta_k . (2*M_PI/global_nb[mu])
|
||||||
|
*
|
||||||
|
* Then A{ji}^{b,b+l} = M^{-1}_{lm} ComputeProj_{m,b,i,j}
|
||||||
|
*/
|
||||||
|
teigen-=usecond();
|
||||||
|
Eigen::MatrixXcd Mkl = Eigen::MatrixXcd::Zero(npoint,npoint);
|
||||||
|
Eigen::MatrixXcd invMkl = Eigen::MatrixXcd::Zero(npoint,npoint);
|
||||||
|
ComplexD ci(0.0,1.0);
|
||||||
|
for(int k=0;k<npoint;k++){ // Loop over momenta
|
||||||
|
|
||||||
|
for(int l=0;l<npoint;l++){ // Loop over nbr relative
|
||||||
|
ComplexD phase(0.0,0.0);
|
||||||
|
for(int mu=0;mu<Nd;mu++){
|
||||||
|
RealD TwoPiL = M_PI * 2.0/ clatt[mu];
|
||||||
|
phase=phase+TwoPiL*geom.shifts[k][mu]*geom.shifts[l][mu];
|
||||||
|
}
|
||||||
|
phase=exp(phase*ci);
|
||||||
|
Mkl(k,l) = phase;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
invMkl = Mkl.inverse();
|
||||||
|
teigen+=usecond();
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////////////////////////
|
||||||
|
// Now compute the matrix elements of linop between the orthonormal
|
||||||
|
// set of vectors.
|
||||||
|
///////////////////////////////////////////////////////////////////////
|
||||||
|
FineField phaV(grid); // Phased block basis vector
|
||||||
|
FineField MphaV(grid);// Matrix applied
|
||||||
|
CoarseVector coarseInner(CoarseGrid());
|
||||||
|
|
||||||
|
std::vector<CoarseVector> ComputeProj(npoint,CoarseGrid());
|
||||||
|
std::vector<CoarseVector> FT(npoint,CoarseGrid());
|
||||||
|
for(int i=0;i<nbasis;i++){// Loop over basis vectors
|
||||||
|
std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl;
|
||||||
|
for(int p=0;p<npoint;p++){ // Loop over momenta in npoint
|
||||||
|
/////////////////////////////////////////////////////
|
||||||
|
// Stick a phase on every block
|
||||||
|
/////////////////////////////////////////////////////
|
||||||
|
tphase-=usecond();
|
||||||
|
CoarseComplexField coor(CoarseGrid());
|
||||||
|
CoarseComplexField pha(CoarseGrid()); pha=Zero();
|
||||||
|
for(int mu=0;mu<Nd;mu++){
|
||||||
|
LatticeCoordinate(coor,mu);
|
||||||
|
RealD TwoPiL = M_PI * 2.0/ clatt[mu];
|
||||||
|
pha = pha + (TwoPiL * geom.shifts[p][mu]) * coor;
|
||||||
|
}
|
||||||
|
pha =exp(pha*ci);
|
||||||
|
phaV=Zero();
|
||||||
|
blockZAXPY(phaV,pha,Subspace.subspace[i],phaV);
|
||||||
|
tphase+=usecond();
|
||||||
|
|
||||||
|
/////////////////////////////////////////////////////////////////////
|
||||||
|
// Multiple phased subspace vector by matrix and project to subspace
|
||||||
|
// Remove local bulk phase to leave relative phases
|
||||||
|
/////////////////////////////////////////////////////////////////////
|
||||||
|
tmat-=usecond();
|
||||||
|
linop.Op(phaV,MphaV);
|
||||||
|
tmat+=usecond();
|
||||||
|
|
||||||
|
tproj-=usecond();
|
||||||
|
blockProject(coarseInner,MphaV,Subspace.subspace);
|
||||||
|
coarseInner = conjugate(pha) * coarseInner;
|
||||||
|
|
||||||
|
ComputeProj[p] = coarseInner;
|
||||||
|
tproj+=usecond();
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
|
tinv-=usecond();
|
||||||
|
for(int k=0;k<npoint;k++){
|
||||||
|
FT[k] = Zero();
|
||||||
|
for(int l=0;l<npoint;l++){
|
||||||
|
FT[k]= FT[k]+ invMkl(l,k)*ComputeProj[l];
|
||||||
|
}
|
||||||
|
|
||||||
|
int osites=CoarseGrid()->oSites();
|
||||||
|
autoView( A_v , _A[k], AcceleratorWrite);
|
||||||
|
autoView( FT_v , FT[k], AcceleratorRead);
|
||||||
|
accelerator_for(sss, osites, 1, {
|
||||||
|
for(int j=0;j<nbasis;j++){
|
||||||
|
A_v[sss](j,i) = FT_v[sss](j);
|
||||||
|
}
|
||||||
|
});
|
||||||
|
}
|
||||||
|
tinv+=usecond();
|
||||||
|
}
|
||||||
|
|
||||||
|
for(int p=0;p<geom.npoint;p++){
|
||||||
|
Coordinate coor({0,0,0,0,0});
|
||||||
|
auto sval = peekSite(_A[p],coor);
|
||||||
|
}
|
||||||
|
|
||||||
|
// Only needed if nonhermitian
|
||||||
|
if ( ! hermitian ) {
|
||||||
|
std::cout << GridLogMessage<<"PopulateAdag "<<std::endl;
|
||||||
|
PopulateAdag();
|
||||||
|
}
|
||||||
|
|
||||||
|
// Need to write something to populate Adag from A
|
||||||
|
ExchangeCoarseLinks();
|
||||||
|
std::cout << GridLogMessage<<"CoarsenOperator eigen "<<teigen<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"CoarsenOperator phase "<<tphase<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"CoarsenOperator mat "<<tmat <<" us"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"CoarsenOperator proj "<<tproj<<" us"<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"CoarsenOperator inv "<<tinv<<" us"<<std::endl;
|
||||||
|
}
|
||||||
|
void ExchangeCoarseLinks(void){
|
||||||
|
for(int p=0;p<geom.npoint;p++){
|
||||||
|
_A[p] = Cell.Exchange(_A[p]);
|
||||||
|
_Adag[p]= Cell.Exchange(_Adag[p]);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
virtual void Mdiag (const Field &in, Field &out){ assert(0);};
|
||||||
|
virtual void Mdir (const Field &in, Field &out,int dir, int disp){assert(0);};
|
||||||
|
virtual void MdirAll (const Field &in, std::vector<Field> &out){assert(0);};
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
NAMESPACE_END(Grid);
|
243
Grid/algorithms/multigrid/Geometry.h
Normal file
243
Grid/algorithms/multigrid/Geometry.h
Normal file
@ -0,0 +1,243 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./lib/algorithms/GeneralCoarsenedMatrix.h
|
||||||
|
|
||||||
|
Copyright (C) 2015
|
||||||
|
|
||||||
|
Author: Peter Boyle <pboyle@bnl.gov>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#pragma once
|
||||||
|
|
||||||
|
NAMESPACE_BEGIN(Grid);
|
||||||
|
|
||||||
|
|
||||||
|
/////////////////////////////////////////////////////////////////
|
||||||
|
// Geometry class in cartesian case
|
||||||
|
/////////////////////////////////////////////////////////////////
|
||||||
|
|
||||||
|
class Geometry {
|
||||||
|
public:
|
||||||
|
int npoint;
|
||||||
|
int base;
|
||||||
|
std::vector<int> directions ;
|
||||||
|
std::vector<int> displacements;
|
||||||
|
std::vector<int> points_dagger;
|
||||||
|
|
||||||
|
Geometry(int _d) {
|
||||||
|
|
||||||
|
base = (_d==5) ? 1:0;
|
||||||
|
|
||||||
|
// make coarse grid stencil for 4d , not 5d
|
||||||
|
if ( _d==5 ) _d=4;
|
||||||
|
|
||||||
|
npoint = 2*_d+1;
|
||||||
|
directions.resize(npoint);
|
||||||
|
displacements.resize(npoint);
|
||||||
|
points_dagger.resize(npoint);
|
||||||
|
for(int d=0;d<_d;d++){
|
||||||
|
directions[d ] = d+base;
|
||||||
|
directions[d+_d] = d+base;
|
||||||
|
displacements[d ] = +1;
|
||||||
|
displacements[d+_d]= -1;
|
||||||
|
points_dagger[d ] = d+_d;
|
||||||
|
points_dagger[d+_d] = d;
|
||||||
|
}
|
||||||
|
directions [2*_d]=0;
|
||||||
|
displacements[2*_d]=0;
|
||||||
|
points_dagger[2*_d]=2*_d;
|
||||||
|
}
|
||||||
|
|
||||||
|
int point(int dir, int disp) {
|
||||||
|
assert(disp == -1 || disp == 0 || disp == 1);
|
||||||
|
assert(base+0 <= dir && dir < base+4);
|
||||||
|
|
||||||
|
// directions faster index = new indexing
|
||||||
|
// 4d (base = 0):
|
||||||
|
// point 0 1 2 3 4 5 6 7 8
|
||||||
|
// dir 0 1 2 3 0 1 2 3 0
|
||||||
|
// disp +1 +1 +1 +1 -1 -1 -1 -1 0
|
||||||
|
// 5d (base = 1):
|
||||||
|
// point 0 1 2 3 4 5 6 7 8
|
||||||
|
// dir 1 2 3 4 1 2 3 4 0
|
||||||
|
// disp +1 +1 +1 +1 -1 -1 -1 -1 0
|
||||||
|
|
||||||
|
// displacements faster index = old indexing
|
||||||
|
// 4d (base = 0):
|
||||||
|
// point 0 1 2 3 4 5 6 7 8
|
||||||
|
// dir 0 0 1 1 2 2 3 3 0
|
||||||
|
// disp +1 -1 +1 -1 +1 -1 +1 -1 0
|
||||||
|
// 5d (base = 1):
|
||||||
|
// point 0 1 2 3 4 5 6 7 8
|
||||||
|
// dir 1 1 2 2 3 3 4 4 0
|
||||||
|
// disp +1 -1 +1 -1 +1 -1 +1 -1 0
|
||||||
|
|
||||||
|
if(dir == 0 and disp == 0)
|
||||||
|
return 8;
|
||||||
|
else // New indexing
|
||||||
|
return (1 - disp) / 2 * 4 + dir - base;
|
||||||
|
// else // Old indexing
|
||||||
|
// return (4 * (dir - base) + 1 - disp) / 2;
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
/////////////////////////////////////////////////////////////////
|
||||||
|
// Less local equivalent of Geometry class in cartesian case
|
||||||
|
/////////////////////////////////////////////////////////////////
|
||||||
|
class NonLocalStencilGeometry {
|
||||||
|
public:
|
||||||
|
int depth;
|
||||||
|
int hops;
|
||||||
|
int npoint;
|
||||||
|
std::vector<Coordinate> shifts;
|
||||||
|
Coordinate stencil_size;
|
||||||
|
Coordinate stencil_lo;
|
||||||
|
Coordinate stencil_hi;
|
||||||
|
GridCartesian *grid;
|
||||||
|
GridCartesian *Grid() {return grid;};
|
||||||
|
int Depth(void){return 1;}; // Ghost zone depth
|
||||||
|
int Hops(void){return hops;}; // # of hops=> level of corner fill in in stencil
|
||||||
|
|
||||||
|
virtual int DimSkip(void) =0;
|
||||||
|
|
||||||
|
virtual ~NonLocalStencilGeometry() {};
|
||||||
|
|
||||||
|
int Reverse(int point)
|
||||||
|
{
|
||||||
|
int Nd = Grid()->Nd();
|
||||||
|
Coordinate shft = shifts[point];
|
||||||
|
Coordinate rev(Nd);
|
||||||
|
for(int mu=0;mu<Nd;mu++) rev[mu]= -shft[mu];
|
||||||
|
for(int p=0;p<npoint;p++){
|
||||||
|
if(rev==shifts[p]){
|
||||||
|
return p;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
assert(0);
|
||||||
|
return -1;
|
||||||
|
}
|
||||||
|
void BuildShifts(void)
|
||||||
|
{
|
||||||
|
this->shifts.resize(0);
|
||||||
|
int Nd = this->grid->Nd();
|
||||||
|
|
||||||
|
int dd = this->DimSkip();
|
||||||
|
for(int s0=this->stencil_lo[dd+0];s0<=this->stencil_hi[dd+0];s0++){
|
||||||
|
for(int s1=this->stencil_lo[dd+1];s1<=this->stencil_hi[dd+1];s1++){
|
||||||
|
for(int s2=this->stencil_lo[dd+2];s2<=this->stencil_hi[dd+2];s2++){
|
||||||
|
for(int s3=this->stencil_lo[dd+3];s3<=this->stencil_hi[dd+3];s3++){
|
||||||
|
Coordinate sft(Nd,0);
|
||||||
|
sft[dd+0] = s0;
|
||||||
|
sft[dd+1] = s1;
|
||||||
|
sft[dd+2] = s2;
|
||||||
|
sft[dd+3] = s3;
|
||||||
|
int nhops = abs(s0)+abs(s1)+abs(s2)+abs(s3);
|
||||||
|
if(nhops<=this->hops) this->shifts.push_back(sft);
|
||||||
|
}}}}
|
||||||
|
this->npoint = this->shifts.size();
|
||||||
|
std::cout << GridLogMessage << "NonLocalStencilGeometry has "<< this->npoint << " terms in stencil "<<std::endl;
|
||||||
|
}
|
||||||
|
|
||||||
|
NonLocalStencilGeometry(GridCartesian *_coarse_grid,int _hops) : grid(_coarse_grid), hops(_hops)
|
||||||
|
{
|
||||||
|
Coordinate latt = grid->GlobalDimensions();
|
||||||
|
stencil_size.resize(grid->Nd());
|
||||||
|
stencil_lo.resize(grid->Nd());
|
||||||
|
stencil_hi.resize(grid->Nd());
|
||||||
|
for(int d=0;d<grid->Nd();d++){
|
||||||
|
if ( latt[d] == 1 ) {
|
||||||
|
stencil_lo[d] = 0;
|
||||||
|
stencil_hi[d] = 0;
|
||||||
|
stencil_size[d]= 1;
|
||||||
|
} else if ( latt[d] == 2 ) {
|
||||||
|
stencil_lo[d] = -1;
|
||||||
|
stencil_hi[d] = 0;
|
||||||
|
stencil_size[d]= 2;
|
||||||
|
} else if ( latt[d] > 2 ) {
|
||||||
|
stencil_lo[d] = -1;
|
||||||
|
stencil_hi[d] = 1;
|
||||||
|
stencil_size[d]= 3;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
// Need to worry about red-black now
|
||||||
|
class NonLocalStencilGeometry4D : public NonLocalStencilGeometry {
|
||||||
|
public:
|
||||||
|
virtual int DimSkip(void) { return 0;};
|
||||||
|
NonLocalStencilGeometry4D(GridCartesian *Coarse,int _hops) : NonLocalStencilGeometry(Coarse,_hops) { };
|
||||||
|
virtual ~NonLocalStencilGeometry4D() {};
|
||||||
|
};
|
||||||
|
class NonLocalStencilGeometry5D : public NonLocalStencilGeometry {
|
||||||
|
public:
|
||||||
|
virtual int DimSkip(void) { return 1; };
|
||||||
|
NonLocalStencilGeometry5D(GridCartesian *Coarse,int _hops) : NonLocalStencilGeometry(Coarse,_hops) { };
|
||||||
|
virtual ~NonLocalStencilGeometry5D() {};
|
||||||
|
};
|
||||||
|
/*
|
||||||
|
* Bunch of different options classes
|
||||||
|
*/
|
||||||
|
class NextToNextToNextToNearestStencilGeometry4D : public NonLocalStencilGeometry4D {
|
||||||
|
public:
|
||||||
|
NextToNextToNextToNearestStencilGeometry4D(GridCartesian *Coarse) : NonLocalStencilGeometry4D(Coarse,4)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
class NextToNextToNextToNearestStencilGeometry5D : public NonLocalStencilGeometry5D {
|
||||||
|
public:
|
||||||
|
NextToNextToNextToNearestStencilGeometry5D(GridCartesian *Coarse) : NonLocalStencilGeometry5D(Coarse,4)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
class NextToNearestStencilGeometry4D : public NonLocalStencilGeometry4D {
|
||||||
|
public:
|
||||||
|
NextToNearestStencilGeometry4D(GridCartesian *Coarse) : NonLocalStencilGeometry4D(Coarse,2)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
class NextToNearestStencilGeometry5D : public NonLocalStencilGeometry5D {
|
||||||
|
public:
|
||||||
|
NextToNearestStencilGeometry5D(GridCartesian *Coarse) : NonLocalStencilGeometry5D(Coarse,2)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
class NearestStencilGeometry4D : public NonLocalStencilGeometry4D {
|
||||||
|
public:
|
||||||
|
NearestStencilGeometry4D(GridCartesian *Coarse) : NonLocalStencilGeometry4D(Coarse,1)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
class NearestStencilGeometry5D : public NonLocalStencilGeometry5D {
|
||||||
|
public:
|
||||||
|
NearestStencilGeometry5D(GridCartesian *Coarse) : NonLocalStencilGeometry5D(Coarse,1)
|
||||||
|
{
|
||||||
|
this->BuildShifts();
|
||||||
|
};
|
||||||
|
};
|
||||||
|
|
||||||
|
NAMESPACE_END(Grid);
|
33
Grid/algorithms/multigrid/MultiGrid.h
Normal file
33
Grid/algorithms/multigrid/MultiGrid.h
Normal file
@ -0,0 +1,33 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: Grid/algorithms/multigrid/MultiGrid.h
|
||||||
|
|
||||||
|
Copyright (C) 2023
|
||||||
|
|
||||||
|
Author: Peter Boyle <pboyle@bnl.gov>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#pragma once
|
||||||
|
|
||||||
|
#include <Grid/algorithms/multigrid/Aggregates.h>
|
||||||
|
#include <Grid/algorithms/multigrid/Geometry.h>
|
||||||
|
#include <Grid/algorithms/multigrid/CoarsenedMatrix.h>
|
||||||
|
#include <Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h>
|
@ -209,9 +209,9 @@ private:
|
|||||||
static void CpuViewClose(uint64_t Ptr);
|
static void CpuViewClose(uint64_t Ptr);
|
||||||
static uint64_t CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
static uint64_t CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||||
#endif
|
#endif
|
||||||
static void NotifyDeletion(void * CpuPtr);
|
|
||||||
|
|
||||||
public:
|
public:
|
||||||
|
static void NotifyDeletion(void * CpuPtr);
|
||||||
static void Print(void);
|
static void Print(void);
|
||||||
static void PrintAll(void);
|
static void PrintAll(void);
|
||||||
static void PrintState( void* CpuPtr);
|
static void PrintState( void* CpuPtr);
|
||||||
|
@ -8,7 +8,7 @@ NAMESPACE_BEGIN(Grid);
|
|||||||
static char print_buffer [ MAXLINE ];
|
static char print_buffer [ MAXLINE ];
|
||||||
|
|
||||||
#define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer;
|
#define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer;
|
||||||
#define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer;
|
#define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogDebug << print_buffer;
|
||||||
//#define dprintf(...)
|
//#define dprintf(...)
|
||||||
|
|
||||||
|
|
||||||
@ -111,7 +111,7 @@ void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
|
|||||||
///////////////////////////////////////////////////////////
|
///////////////////////////////////////////////////////////
|
||||||
assert(AccCache.state!=Empty);
|
assert(AccCache.state!=Empty);
|
||||||
|
|
||||||
mprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);
|
dprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);
|
||||||
assert(AccCache.accLock==0);
|
assert(AccCache.accLock==0);
|
||||||
assert(AccCache.cpuLock==0);
|
assert(AccCache.cpuLock==0);
|
||||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||||
@ -141,7 +141,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
|
|||||||
///////////////////////////////////////////////////////////////////////////
|
///////////////////////////////////////////////////////////////////////////
|
||||||
assert(AccCache.state!=Empty);
|
assert(AccCache.state!=Empty);
|
||||||
|
|
||||||
mprintf("MemoryManager: Evict cpu %lx acc %lx cpuLock %ld accLock %ld\n",
|
mprintf("MemoryManager: Evict CpuPtr %lx AccPtr %lx cpuLock %ld accLock %ld\n",
|
||||||
(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr,
|
(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr,
|
||||||
(uint64_t)AccCache.cpuLock,(uint64_t)AccCache.accLock);
|
(uint64_t)AccCache.cpuLock,(uint64_t)AccCache.accLock);
|
||||||
if (AccCache.accLock!=0) return;
|
if (AccCache.accLock!=0) return;
|
||||||
@ -155,7 +155,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
|
|||||||
AccCache.AccPtr=(uint64_t)NULL;
|
AccCache.AccPtr=(uint64_t)NULL;
|
||||||
AccCache.state=CpuDirty; // CPU primary now
|
AccCache.state=CpuDirty; // CPU primary now
|
||||||
DeviceBytes -=AccCache.bytes;
|
DeviceBytes -=AccCache.bytes;
|
||||||
dprintf("MemoryManager: Free(%lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);
|
dprintf("MemoryManager: Free(AccPtr %lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);
|
||||||
}
|
}
|
||||||
// uint64_t CpuPtr = AccCache.CpuPtr;
|
// uint64_t CpuPtr = AccCache.CpuPtr;
|
||||||
DeviceEvictions++;
|
DeviceEvictions++;
|
||||||
@ -169,7 +169,7 @@ void MemoryManager::Flush(AcceleratorViewEntry &AccCache)
|
|||||||
assert(AccCache.AccPtr!=(uint64_t)NULL);
|
assert(AccCache.AccPtr!=(uint64_t)NULL);
|
||||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||||
acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
|
acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
|
||||||
mprintf("MemoryManager: Flush %lx -> %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
mprintf("MemoryManager: acceleratorCopyFromDevice Flush AccPtr %lx -> CpuPtr %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
||||||
DeviceToHostBytes+=AccCache.bytes;
|
DeviceToHostBytes+=AccCache.bytes;
|
||||||
DeviceToHostXfer++;
|
DeviceToHostXfer++;
|
||||||
AccCache.state=Consistent;
|
AccCache.state=Consistent;
|
||||||
@ -184,7 +184,7 @@ void MemoryManager::Clone(AcceleratorViewEntry &AccCache)
|
|||||||
AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
|
AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
|
||||||
DeviceBytes+=AccCache.bytes;
|
DeviceBytes+=AccCache.bytes;
|
||||||
}
|
}
|
||||||
mprintf("MemoryManager: Clone %lx <- %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
mprintf("MemoryManager: acceleratorCopyToDevice Clone AccPtr %lx <- CpuPtr %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
||||||
acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
|
acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
|
||||||
HostToDeviceBytes+=AccCache.bytes;
|
HostToDeviceBytes+=AccCache.bytes;
|
||||||
HostToDeviceXfer++;
|
HostToDeviceXfer++;
|
||||||
|
@ -70,8 +70,8 @@ public:
|
|||||||
Coordinate _istride; // Inner stride i.e. within simd lane
|
Coordinate _istride; // Inner stride i.e. within simd lane
|
||||||
int _osites; // _isites*_osites = product(dimensions).
|
int _osites; // _isites*_osites = product(dimensions).
|
||||||
int _isites;
|
int _isites;
|
||||||
int _fsites; // _isites*_osites = product(dimensions).
|
int64_t _fsites; // _isites*_osites = product(dimensions).
|
||||||
int _gsites;
|
int64_t _gsites;
|
||||||
Coordinate _slice_block;// subslice information
|
Coordinate _slice_block;// subslice information
|
||||||
Coordinate _slice_stride;
|
Coordinate _slice_stride;
|
||||||
Coordinate _slice_nblock;
|
Coordinate _slice_nblock;
|
||||||
@ -183,7 +183,7 @@ public:
|
|||||||
inline int Nsimd(void) const { return _isites; };// Synonymous with iSites
|
inline int Nsimd(void) const { return _isites; };// Synonymous with iSites
|
||||||
inline int oSites(void) const { return _osites; };
|
inline int oSites(void) const { return _osites; };
|
||||||
inline int lSites(void) const { return _isites*_osites; };
|
inline int lSites(void) const { return _isites*_osites; };
|
||||||
inline int gSites(void) const { return _isites*_osites*_Nprocessors; };
|
inline int64_t gSites(void) const { return (int64_t)_isites*(int64_t)_osites*(int64_t)_Nprocessors; };
|
||||||
inline int Nd (void) const { return _ndimension;};
|
inline int Nd (void) const { return _ndimension;};
|
||||||
|
|
||||||
inline const Coordinate LocalStarts(void) { return _lstart; };
|
inline const Coordinate LocalStarts(void) { return _lstart; };
|
||||||
@ -214,7 +214,7 @@ public:
|
|||||||
////////////////////////////////////////////////////////////////
|
////////////////////////////////////////////////////////////////
|
||||||
// Global addressing
|
// Global addressing
|
||||||
////////////////////////////////////////////////////////////////
|
////////////////////////////////////////////////////////////////
|
||||||
void GlobalIndexToGlobalCoor(int gidx,Coordinate &gcoor){
|
void GlobalIndexToGlobalCoor(int64_t gidx,Coordinate &gcoor){
|
||||||
assert(gidx< gSites());
|
assert(gidx< gSites());
|
||||||
Lexicographic::CoorFromIndex(gcoor,gidx,_gdimensions);
|
Lexicographic::CoorFromIndex(gcoor,gidx,_gdimensions);
|
||||||
}
|
}
|
||||||
@ -222,7 +222,7 @@ public:
|
|||||||
assert(lidx<lSites());
|
assert(lidx<lSites());
|
||||||
Lexicographic::CoorFromIndex(lcoor,lidx,_ldimensions);
|
Lexicographic::CoorFromIndex(lcoor,lidx,_ldimensions);
|
||||||
}
|
}
|
||||||
void GlobalCoorToGlobalIndex(const Coordinate & gcoor,int & gidx){
|
void GlobalCoorToGlobalIndex(const Coordinate & gcoor,int64_t & gidx){
|
||||||
gidx=0;
|
gidx=0;
|
||||||
int mult=1;
|
int mult=1;
|
||||||
for(int mu=0;mu<_ndimension;mu++) {
|
for(int mu=0;mu<_ndimension;mu++) {
|
||||||
|
@ -138,6 +138,14 @@ public:
|
|||||||
////////////////////////////////////////////////////////////
|
////////////////////////////////////////////////////////////
|
||||||
// Face exchange, buffer swap in translational invariant way
|
// Face exchange, buffer swap in translational invariant way
|
||||||
////////////////////////////////////////////////////////////
|
////////////////////////////////////////////////////////////
|
||||||
|
void CommsComplete(std::vector<CommsRequest_t> &list);
|
||||||
|
void SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||||
|
void *xmit,
|
||||||
|
int dest,
|
||||||
|
void *recv,
|
||||||
|
int from,
|
||||||
|
int bytes,int dir);
|
||||||
|
|
||||||
void SendToRecvFrom(void *xmit,
|
void SendToRecvFrom(void *xmit,
|
||||||
int xmit_to_rank,
|
int xmit_to_rank,
|
||||||
void *recv,
|
void *recv,
|
||||||
|
@ -306,6 +306,44 @@ void CartesianCommunicator::GlobalSumVector(double *d,int N)
|
|||||||
int ierr = MPI_Allreduce(MPI_IN_PLACE,d,N,MPI_DOUBLE,MPI_SUM,communicator);
|
int ierr = MPI_Allreduce(MPI_IN_PLACE,d,N,MPI_DOUBLE,MPI_SUM,communicator);
|
||||||
assert(ierr==0);
|
assert(ierr==0);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||||
|
void *xmit,
|
||||||
|
int dest,
|
||||||
|
void *recv,
|
||||||
|
int from,
|
||||||
|
int bytes,int dir)
|
||||||
|
{
|
||||||
|
MPI_Request xrq;
|
||||||
|
MPI_Request rrq;
|
||||||
|
|
||||||
|
assert(dest != _processor);
|
||||||
|
assert(from != _processor);
|
||||||
|
|
||||||
|
int tag;
|
||||||
|
|
||||||
|
tag= dir+from*32;
|
||||||
|
int ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator,&rrq);
|
||||||
|
assert(ierr==0);
|
||||||
|
list.push_back(rrq);
|
||||||
|
|
||||||
|
tag= dir+_processor*32;
|
||||||
|
ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator,&xrq);
|
||||||
|
assert(ierr==0);
|
||||||
|
list.push_back(xrq);
|
||||||
|
}
|
||||||
|
void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list)
|
||||||
|
{
|
||||||
|
int nreq=list.size();
|
||||||
|
|
||||||
|
if (nreq==0) return;
|
||||||
|
|
||||||
|
std::vector<MPI_Status> status(nreq);
|
||||||
|
int ierr = MPI_Waitall(nreq,&list[0],&status[0]);
|
||||||
|
assert(ierr==0);
|
||||||
|
list.resize(0);
|
||||||
|
}
|
||||||
|
|
||||||
// Basic Halo comms primitive
|
// Basic Halo comms primitive
|
||||||
void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
||||||
int dest,
|
int dest,
|
||||||
|
@ -91,6 +91,17 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
|||||||
{
|
{
|
||||||
assert(0);
|
assert(0);
|
||||||
}
|
}
|
||||||
|
void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list){ assert(0);}
|
||||||
|
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||||
|
void *xmit,
|
||||||
|
int dest,
|
||||||
|
void *recv,
|
||||||
|
int from,
|
||||||
|
int bytes,int dir)
|
||||||
|
{
|
||||||
|
assert(0);
|
||||||
|
}
|
||||||
|
|
||||||
void CartesianCommunicator::AllToAll(int dim,void *in,void *out,uint64_t words,uint64_t bytes)
|
void CartesianCommunicator::AllToAll(int dim,void *in,void *out,uint64_t words,uint64_t bytes)
|
||||||
{
|
{
|
||||||
bcopy(in,out,bytes*words);
|
bcopy(in,out,bytes*words);
|
||||||
|
@ -360,7 +360,7 @@ public:
|
|||||||
|
|
||||||
template<class vobj> std::ostream& operator<< (std::ostream& stream, const Lattice<vobj> &o){
|
template<class vobj> std::ostream& operator<< (std::ostream& stream, const Lattice<vobj> &o){
|
||||||
typedef typename vobj::scalar_object sobj;
|
typedef typename vobj::scalar_object sobj;
|
||||||
for(int g=0;g<o.Grid()->_gsites;g++){
|
for(int64_t g=0;g<o.Grid()->_gsites;g++){
|
||||||
|
|
||||||
Coordinate gcoor;
|
Coordinate gcoor;
|
||||||
o.Grid()->GlobalIndexToGlobalCoor(g,gcoor);
|
o.Grid()->GlobalIndexToGlobalCoor(g,gcoor);
|
||||||
|
@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
|||||||
|
|
||||||
NAMESPACE_BEGIN(Grid);
|
NAMESPACE_BEGIN(Grid);
|
||||||
|
|
||||||
template<class vobj> void DumpSliceNorm(std::string s,Lattice<vobj> &f,int mu=-1)
|
template<class vobj> void DumpSliceNorm(std::string s,const Lattice<vobj> &f,int mu=-1)
|
||||||
{
|
{
|
||||||
auto ff = localNorm2(f);
|
auto ff = localNorm2(f);
|
||||||
if ( mu==-1 ) mu = f.Grid()->Nd()-1;
|
if ( mu==-1 ) mu = f.Grid()->Nd()-1;
|
||||||
|
@ -361,9 +361,14 @@ public:
|
|||||||
_bernoulli.resize(_vol,std::discrete_distribution<int32_t>{1,1});
|
_bernoulli.resize(_vol,std::discrete_distribution<int32_t>{1,1});
|
||||||
_uid.resize(_vol,std::uniform_int_distribution<uint32_t>() );
|
_uid.resize(_vol,std::uniform_int_distribution<uint32_t>() );
|
||||||
}
|
}
|
||||||
|
template <class vobj,class distribution> inline void fill(Lattice<vobj> &l,std::vector<distribution> &dist)
|
||||||
template <class vobj,class distribution> inline void fill(Lattice<vobj> &l,std::vector<distribution> &dist){
|
{
|
||||||
|
if ( l.Grid()->_isCheckerBoarded ) {
|
||||||
|
Lattice<vobj> tmp(_grid);
|
||||||
|
fill(tmp,dist);
|
||||||
|
pickCheckerboard(l.Checkerboard(),l,tmp);
|
||||||
|
return;
|
||||||
|
}
|
||||||
typedef typename vobj::scalar_object scalar_object;
|
typedef typename vobj::scalar_object scalar_object;
|
||||||
typedef typename vobj::scalar_type scalar_type;
|
typedef typename vobj::scalar_type scalar_type;
|
||||||
typedef typename vobj::vector_type vector_type;
|
typedef typename vobj::vector_type vector_type;
|
||||||
@ -427,7 +432,7 @@ public:
|
|||||||
#if 1
|
#if 1
|
||||||
thread_for( lidx, _grid->lSites(), {
|
thread_for( lidx, _grid->lSites(), {
|
||||||
|
|
||||||
int gidx;
|
int64_t gidx;
|
||||||
int o_idx;
|
int o_idx;
|
||||||
int i_idx;
|
int i_idx;
|
||||||
int rank;
|
int rank;
|
||||||
|
@ -471,13 +471,13 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
|||||||
|
|
||||||
vobj zz = Zero();
|
vobj zz = Zero();
|
||||||
|
|
||||||
accelerator_for(sc,coarse->oSites(),1,{
|
accelerator_for(sc,coarse->oSites(),vobj::Nsimd(),{
|
||||||
|
|
||||||
// One thread per sub block
|
// One thread per sub block
|
||||||
Coordinate coor_c(_ndimension);
|
Coordinate coor_c(_ndimension);
|
||||||
Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions); // Block coordinate
|
Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions); // Block coordinate
|
||||||
|
|
||||||
vobj cd = zz;
|
auto cd = coalescedRead(zz);
|
||||||
|
|
||||||
for(int sb=0;sb<blockVol;sb++){
|
for(int sb=0;sb<blockVol;sb++){
|
||||||
|
|
||||||
@ -488,10 +488,10 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
|||||||
for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
|
for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
|
||||||
Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions);
|
Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions);
|
||||||
|
|
||||||
cd=cd+fineData_p[sf];
|
cd=cd+coalescedRead(fineData_p[sf]);
|
||||||
}
|
}
|
||||||
|
|
||||||
coarseData_p[sc] = cd;
|
coalescedWrite(coarseData_p[sc],cd);
|
||||||
|
|
||||||
});
|
});
|
||||||
return;
|
return;
|
||||||
@ -1054,7 +1054,7 @@ void Replicate(const Lattice<vobj> &coarse,Lattice<vobj> & fine)
|
|||||||
|
|
||||||
Coordinate fcoor(nd);
|
Coordinate fcoor(nd);
|
||||||
Coordinate ccoor(nd);
|
Coordinate ccoor(nd);
|
||||||
for(int g=0;g<fg->gSites();g++){
|
for(int64_t g=0;g<fg->gSites();g++){
|
||||||
|
|
||||||
fg->GlobalIndexToGlobalCoor(g,fcoor);
|
fg->GlobalIndexToGlobalCoor(g,fcoor);
|
||||||
for(int d=0;d<nd;d++){
|
for(int d=0;d<nd;d++){
|
||||||
|
@ -45,6 +45,170 @@ struct CshiftImplGauge: public CshiftImplBase<typename Gimpl::GaugeLinkField::ve
|
|||||||
typename Gimpl::GaugeLinkField Cshift(const typename Gimpl::GaugeLinkField &in, int dir, int shift) const override{ return Gimpl::CshiftLink(in,dir,shift); }
|
typename Gimpl::GaugeLinkField Cshift(const typename Gimpl::GaugeLinkField &in, int dir, int shift) const override{ return Gimpl::CshiftLink(in,dir,shift); }
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|
||||||
|
/*
|
||||||
|
*
|
||||||
|
* TODO:
|
||||||
|
* -- address elementsof vobj via thread block in Scatter/Gather
|
||||||
|
* -- overlap comms with motion in Face_exchange
|
||||||
|
*
|
||||||
|
*/
|
||||||
|
|
||||||
|
template<class vobj> inline void ScatterSlice(const cshiftVector<vobj> &buf,
|
||||||
|
Lattice<vobj> &lat,
|
||||||
|
int x,
|
||||||
|
int dim,
|
||||||
|
int offset=0)
|
||||||
|
{
|
||||||
|
const int Nsimd=vobj::Nsimd();
|
||||||
|
typedef typename vobj::scalar_object sobj;
|
||||||
|
|
||||||
|
GridBase *grid = lat.Grid();
|
||||||
|
Coordinate simd = grid->_simd_layout;
|
||||||
|
int Nd = grid->Nd();
|
||||||
|
int block = grid->_slice_block[dim];
|
||||||
|
int stride = grid->_slice_stride[dim];
|
||||||
|
int nblock = grid->_slice_nblock[dim];
|
||||||
|
int rd = grid->_rdimensions[dim];
|
||||||
|
|
||||||
|
int ox = x%rd;
|
||||||
|
int ix = x/rd;
|
||||||
|
|
||||||
|
int isites = 1; for(int d=0;d<Nd;d++) if( d!=dim) isites*=simd[d];
|
||||||
|
|
||||||
|
Coordinate rsimd= simd; rsimd[dim]=1; // maybe reduce Nsimd
|
||||||
|
|
||||||
|
int rNsimd = 1; for(int d=0;d<Nd;d++) rNsimd*=rsimd[d];
|
||||||
|
int rNsimda= Nsimd/simd[dim]; // should be equal
|
||||||
|
assert(rNsimda==rNsimd);
|
||||||
|
int face_ovol=block*nblock;
|
||||||
|
|
||||||
|
// assert(buf.size()==face_ovol*rNsimd);
|
||||||
|
|
||||||
|
/*This will work GPU ONLY unless rNsimd is put in the lexico index*/
|
||||||
|
//Let's make it work on GPU and then make a special accelerator_for that
|
||||||
|
//doesn't hide the SIMD direction and keeps explicit in the threadIdx
|
||||||
|
//for cross platform
|
||||||
|
// FIXME -- can put internal indices into thread loop
|
||||||
|
auto buf_p = & buf[0];
|
||||||
|
autoView(lat_v, lat, AcceleratorRead);
|
||||||
|
accelerator_for(ss, face_ovol/simd[dim],Nsimd,{
|
||||||
|
|
||||||
|
// scalar layout won't coalesce
|
||||||
|
int blane=acceleratorSIMTlane(Nsimd); // buffer lane
|
||||||
|
int olane=blane%rNsimd; // reduced lattice lane
|
||||||
|
int obit =blane/rNsimd;
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////////////////
|
||||||
|
// osite -- potentially one bit from simd in the buffer: (ss<<1)|obit
|
||||||
|
///////////////////////////////////////////////////////////////
|
||||||
|
int ssp = ss*simd[dim]+obit;
|
||||||
|
int b = ssp%block;
|
||||||
|
int n = ssp/block;
|
||||||
|
int osite= b+n*stride + ox*block;
|
||||||
|
|
||||||
|
////////////////////////////////////////////
|
||||||
|
// isite -- map lane within buffer to lane within lattice
|
||||||
|
////////////////////////////////////////////
|
||||||
|
Coordinate icoor;
|
||||||
|
int lane;
|
||||||
|
Lexicographic::CoorFromIndex(icoor,olane,rsimd);
|
||||||
|
icoor[dim]=ix;
|
||||||
|
Lexicographic::IndexFromCoor(icoor,lane,simd);
|
||||||
|
|
||||||
|
///////////////////////////////////////////
|
||||||
|
// Transfer into lattice - will coalesce
|
||||||
|
///////////////////////////////////////////
|
||||||
|
sobj obj = extractLane(blane,buf_p[ss+offset]);
|
||||||
|
insertLane(lane,lat_v[osite],obj);
|
||||||
|
});
|
||||||
|
}
|
||||||
|
|
||||||
|
template<class vobj> inline void GatherSlice(cshiftVector<vobj> &buf,
|
||||||
|
const Lattice<vobj> &lat,
|
||||||
|
int x,
|
||||||
|
int dim,
|
||||||
|
int offset=0)
|
||||||
|
{
|
||||||
|
const int Nsimd=vobj::Nsimd();
|
||||||
|
typedef typename vobj::scalar_object sobj;
|
||||||
|
|
||||||
|
autoView(lat_v, lat, AcceleratorRead);
|
||||||
|
|
||||||
|
GridBase *grid = lat.Grid();
|
||||||
|
Coordinate simd = grid->_simd_layout;
|
||||||
|
int Nd = grid->Nd();
|
||||||
|
int block = grid->_slice_block[dim];
|
||||||
|
int stride = grid->_slice_stride[dim];
|
||||||
|
int nblock = grid->_slice_nblock[dim];
|
||||||
|
int rd = grid->_rdimensions[dim];
|
||||||
|
|
||||||
|
int ox = x%rd;
|
||||||
|
int ix = x/rd;
|
||||||
|
|
||||||
|
int isites = 1; for(int d=0;d<Nd;d++) if( d!=dim) isites*=simd[d];
|
||||||
|
|
||||||
|
Coordinate rsimd= simd; rsimd[dim]=1; // maybe reduce Nsimd
|
||||||
|
|
||||||
|
int rNsimd = 1; for(int d=0;d<Nd;d++) rNsimd*=rsimd[d];
|
||||||
|
|
||||||
|
int face_ovol=block*nblock;
|
||||||
|
|
||||||
|
// assert(buf.size()==face_ovol*rNsimd);
|
||||||
|
|
||||||
|
/*This will work GPU ONLY unless rNsimd is put in the lexico index*/
|
||||||
|
//Let's make it work on GPU and then make a special accelerator_for that
|
||||||
|
//doesn't hide the SIMD direction and keeps explicit in the threadIdx
|
||||||
|
//for cross platform
|
||||||
|
//For CPU perhaps just run a loop over Nsimd
|
||||||
|
auto buf_p = & buf[0];
|
||||||
|
accelerator_for(ss, face_ovol/simd[dim],Nsimd,{
|
||||||
|
|
||||||
|
// scalar layout won't coalesce
|
||||||
|
int blane=acceleratorSIMTlane(Nsimd); // buffer lane
|
||||||
|
int olane=blane%rNsimd; // reduced lattice lane
|
||||||
|
int obit =blane/rNsimd;
|
||||||
|
|
||||||
|
////////////////////////////////////////////
|
||||||
|
// osite
|
||||||
|
////////////////////////////////////////////
|
||||||
|
int ssp = ss*simd[dim]+obit;
|
||||||
|
int b = ssp%block;
|
||||||
|
int n = ssp/block;
|
||||||
|
int osite= b+n*stride + ox*block;
|
||||||
|
|
||||||
|
////////////////////////////////////////////
|
||||||
|
// isite -- map lane within buffer to lane within lattice
|
||||||
|
////////////////////////////////////////////
|
||||||
|
Coordinate icoor;
|
||||||
|
int lane;
|
||||||
|
Lexicographic::CoorFromIndex(icoor,olane,rsimd);
|
||||||
|
icoor[dim]=ix;
|
||||||
|
Lexicographic::IndexFromCoor(icoor,lane,simd);
|
||||||
|
|
||||||
|
///////////////////////////////////////////
|
||||||
|
// Take out of lattice
|
||||||
|
///////////////////////////////////////////
|
||||||
|
|
||||||
|
sobj obj = extractLane(lane,lat_v[osite]);
|
||||||
|
insertLane(blane,buf_p[ss+offset],obj);
|
||||||
|
|
||||||
|
});
|
||||||
|
/*
|
||||||
|
int words =block*nblock/simd[dim];
|
||||||
|
std::vector<vobj> tbuf(words);
|
||||||
|
acceleratorCopyFromDevice((void *)&buf[offset],(void *)&tbuf[0],words*sizeof(vobj));
|
||||||
|
typedef typename vobj::scalar_type scalar;
|
||||||
|
scalar *sbuf = (scalar *)&tbuf[0];
|
||||||
|
scalar tmp=0.0;
|
||||||
|
for(int w=0;w<words*sizeof(vobj)/sizeof(scalar);w++){
|
||||||
|
tmp=tmp+conjugate(sbuf[w])*sbuf[w];
|
||||||
|
}
|
||||||
|
std::cout << " Gathered buffer norm "<<tmp<<std::endl;
|
||||||
|
*/
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
class PaddedCell {
|
class PaddedCell {
|
||||||
public:
|
public:
|
||||||
GridCartesian * unpadded_grid;
|
GridCartesian * unpadded_grid;
|
||||||
@ -63,8 +227,9 @@ public:
|
|||||||
dims=_grid->Nd();
|
dims=_grid->Nd();
|
||||||
AllocateGrids();
|
AllocateGrids();
|
||||||
Coordinate local =unpadded_grid->LocalDimensions();
|
Coordinate local =unpadded_grid->LocalDimensions();
|
||||||
|
Coordinate procs =unpadded_grid->ProcessorGrid();
|
||||||
for(int d=0;d<dims;d++){
|
for(int d=0;d<dims;d++){
|
||||||
assert(local[d]>=depth);
|
if ( procs[d] > 1 ) assert(local[d]>=depth);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
void DeleteGrids(void)
|
void DeleteGrids(void)
|
||||||
@ -81,27 +246,36 @@ public:
|
|||||||
Coordinate processors=unpadded_grid->_processors;
|
Coordinate processors=unpadded_grid->_processors;
|
||||||
Coordinate plocal =unpadded_grid->LocalDimensions();
|
Coordinate plocal =unpadded_grid->LocalDimensions();
|
||||||
Coordinate global(dims);
|
Coordinate global(dims);
|
||||||
|
GridCartesian *old_grid = unpadded_grid;
|
||||||
// expand up one dim at a time
|
// expand up one dim at a time
|
||||||
for(int d=0;d<dims;d++){
|
for(int d=0;d<dims;d++){
|
||||||
|
|
||||||
|
if ( processors[d] > 1 ) {
|
||||||
plocal[d] += 2*depth;
|
plocal[d] += 2*depth;
|
||||||
|
|
||||||
for(int d=0;d<dims;d++){
|
for(int d=0;d<dims;d++){
|
||||||
global[d] = plocal[d]*processors[d];
|
global[d] = plocal[d]*processors[d];
|
||||||
}
|
}
|
||||||
|
|
||||||
grids.push_back(new GridCartesian(global,simd,processors));
|
old_grid = new GridCartesian(global,simd,processors);
|
||||||
|
}
|
||||||
|
grids.push_back(old_grid);
|
||||||
}
|
}
|
||||||
};
|
};
|
||||||
template<class vobj>
|
template<class vobj>
|
||||||
inline Lattice<vobj> Extract(const Lattice<vobj> &in) const
|
inline Lattice<vobj> Extract(const Lattice<vobj> &in) const
|
||||||
{
|
{
|
||||||
|
Coordinate processors=unpadded_grid->_processors;
|
||||||
|
|
||||||
Lattice<vobj> out(unpadded_grid);
|
Lattice<vobj> out(unpadded_grid);
|
||||||
|
|
||||||
Coordinate local =unpadded_grid->LocalDimensions();
|
Coordinate local =unpadded_grid->LocalDimensions();
|
||||||
Coordinate fll(dims,depth); // depends on the MPI spread
|
// depends on the MPI spread
|
||||||
|
Coordinate fll(dims,depth);
|
||||||
Coordinate tll(dims,0); // depends on the MPI spread
|
Coordinate tll(dims,0); // depends on the MPI spread
|
||||||
|
for(int d=0;d<dims;d++){
|
||||||
|
if( processors[d]==1 ) fll[d]=0;
|
||||||
|
}
|
||||||
localCopyRegion(in,out,fll,tll,local);
|
localCopyRegion(in,out,fll,tll,local);
|
||||||
return out;
|
return out;
|
||||||
}
|
}
|
||||||
@ -116,10 +290,22 @@ public:
|
|||||||
}
|
}
|
||||||
return tmp;
|
return tmp;
|
||||||
}
|
}
|
||||||
|
template<class vobj>
|
||||||
|
inline Lattice<vobj> ExchangePeriodic(const Lattice<vobj> &in, const CshiftImplBase<vobj> &cshift = CshiftImplDefault<vobj>()) const
|
||||||
|
{
|
||||||
|
GridBase *old_grid = in.Grid();
|
||||||
|
int dims = old_grid->Nd();
|
||||||
|
Lattice<vobj> tmp = in;
|
||||||
|
for(int d=0;d<dims;d++){
|
||||||
|
tmp = ExpandPeriodic(d,tmp,cshift); // rvalue && assignment
|
||||||
|
}
|
||||||
|
return tmp;
|
||||||
|
}
|
||||||
// expand up one dim at a time
|
// expand up one dim at a time
|
||||||
template<class vobj>
|
template<class vobj>
|
||||||
inline Lattice<vobj> Expand(int dim, const Lattice<vobj> &in, const CshiftImplBase<vobj> &cshift = CshiftImplDefault<vobj>()) const
|
inline Lattice<vobj> Expand(int dim, const Lattice<vobj> &in, const CshiftImplBase<vobj> &cshift = CshiftImplDefault<vobj>()) const
|
||||||
{
|
{
|
||||||
|
Coordinate processors=unpadded_grid->_processors;
|
||||||
GridBase *old_grid = in.Grid();
|
GridBase *old_grid = in.Grid();
|
||||||
GridCartesian *new_grid = grids[dim];//These are new grids
|
GridCartesian *new_grid = grids[dim];//These are new grids
|
||||||
Lattice<vobj> padded(new_grid);
|
Lattice<vobj> padded(new_grid);
|
||||||
@ -129,10 +315,31 @@ public:
|
|||||||
if(dim==0) conformable(old_grid,unpadded_grid);
|
if(dim==0) conformable(old_grid,unpadded_grid);
|
||||||
else conformable(old_grid,grids[dim-1]);
|
else conformable(old_grid,grids[dim-1]);
|
||||||
|
|
||||||
std::cout << " dim "<<dim<<" local "<<local << " padding to "<<plocal<<std::endl;
|
// std::cout << " dim "<<dim<<" local "<<local << " padding to "<<plocal<<std::endl;
|
||||||
|
|
||||||
double tins=0, tshift=0;
|
double tins=0, tshift=0;
|
||||||
|
|
||||||
|
int islocal = 0 ;
|
||||||
|
if ( processors[dim] == 1 ) islocal = 1;
|
||||||
|
|
||||||
|
if ( islocal ) {
|
||||||
|
|
||||||
|
// replace with a copy and maybe grid swizzle
|
||||||
|
double t = usecond();
|
||||||
|
padded = in;
|
||||||
|
tins += usecond() - t;
|
||||||
|
|
||||||
|
} else {
|
||||||
|
|
||||||
|
//////////////////////////////////////////////
|
||||||
|
// Replace sequence with
|
||||||
|
// ---------------------
|
||||||
|
// (i) Gather high face(s); start comms
|
||||||
|
// (ii) Gather low face(s); start comms
|
||||||
|
// (iii) Copy middle bit with localCopyRegion
|
||||||
|
// (iv) Complete high face(s), insert slice(s)
|
||||||
|
// (iv) Complete low face(s), insert slice(s)
|
||||||
|
//////////////////////////////////////////////
|
||||||
// Middle bit
|
// Middle bit
|
||||||
double t = usecond();
|
double t = usecond();
|
||||||
for(int x=0;x<local[dim];x++){
|
for(int x=0;x<local[dim];x++){
|
||||||
@ -162,13 +369,197 @@ public:
|
|||||||
}
|
}
|
||||||
tins += usecond() - t;
|
tins += usecond() - t;
|
||||||
|
|
||||||
|
}
|
||||||
std::cout << GridLogPerformance << "PaddedCell::Expand timings: cshift:" << tshift/1000 << "ms, insert-slice:" << tins/1000 << "ms" << std::endl;
|
std::cout << GridLogPerformance << "PaddedCell::Expand timings: cshift:" << tshift/1000 << "ms, insert-slice:" << tins/1000 << "ms" << std::endl;
|
||||||
|
|
||||||
return padded;
|
return padded;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
template<class vobj>
|
||||||
|
inline Lattice<vobj> ExpandPeriodic(int dim, const Lattice<vobj> &in, const CshiftImplBase<vobj> &cshift = CshiftImplDefault<vobj>()) const
|
||||||
|
{
|
||||||
|
Coordinate processors=unpadded_grid->_processors;
|
||||||
|
GridBase *old_grid = in.Grid();
|
||||||
|
GridCartesian *new_grid = grids[dim];//These are new grids
|
||||||
|
Lattice<vobj> padded(new_grid);
|
||||||
|
Lattice<vobj> shifted(old_grid);
|
||||||
|
Coordinate local =old_grid->LocalDimensions();
|
||||||
|
Coordinate plocal =new_grid->LocalDimensions();
|
||||||
|
if(dim==0) conformable(old_grid,unpadded_grid);
|
||||||
|
else conformable(old_grid,grids[dim-1]);
|
||||||
|
|
||||||
|
// std::cout << " dim "<<dim<<" local "<<local << " padding to "<<plocal<<std::endl;
|
||||||
|
double tins=0, tshift=0;
|
||||||
|
|
||||||
|
int islocal = 0 ;
|
||||||
|
if ( processors[dim] == 1 ) islocal = 1;
|
||||||
|
|
||||||
|
if ( islocal ) {
|
||||||
|
|
||||||
|
// replace with a copy and maybe grid swizzle
|
||||||
|
double t = usecond();
|
||||||
|
padded = in;
|
||||||
|
tins += usecond() - t;
|
||||||
|
|
||||||
|
} else {
|
||||||
|
|
||||||
|
//////////////////////////////////////////////
|
||||||
|
// Replace sequence with
|
||||||
|
// ---------------------
|
||||||
|
// (i) Gather high face(s); start comms
|
||||||
|
// (ii) Gather low face(s); start comms
|
||||||
|
// (iii) Copy middle bit with localCopyRegion
|
||||||
|
// (iv) Complete high face(s), insert slice(s)
|
||||||
|
// (iv) Complete low face(s), insert slice(s)
|
||||||
|
//////////////////////////////////////////////
|
||||||
|
Face_exchange(in,padded,dim,depth);
|
||||||
|
}
|
||||||
|
return padded;
|
||||||
|
}
|
||||||
|
template<class vobj>
|
||||||
|
void Face_exchange(const Lattice<vobj> &from,
|
||||||
|
Lattice<vobj> &to,
|
||||||
|
int dimension,int depth) const
|
||||||
|
{
|
||||||
|
typedef typename vobj::vector_type vector_type;
|
||||||
|
typedef typename vobj::scalar_type scalar_type;
|
||||||
|
typedef typename vobj::scalar_object sobj;
|
||||||
|
|
||||||
|
RealD t_gather=0.0;
|
||||||
|
RealD t_scatter=0.0;
|
||||||
|
RealD t_comms=0.0;
|
||||||
|
RealD t_copy=0.0;
|
||||||
|
|
||||||
|
// std::cout << GridLogMessage << "dimension " <<dimension<<std::endl;
|
||||||
|
// DumpSliceNorm(std::string("Face_exchange from"),from,dimension);
|
||||||
|
GridBase *grid=from.Grid();
|
||||||
|
GridBase *new_grid=to.Grid();
|
||||||
|
|
||||||
|
Coordinate lds = from.Grid()->_ldimensions;
|
||||||
|
Coordinate nlds= to.Grid()->_ldimensions;
|
||||||
|
Coordinate simd= from.Grid()->_simd_layout;
|
||||||
|
int ld = lds[dimension];
|
||||||
|
int nld = to.Grid()->_ldimensions[dimension];
|
||||||
|
const int Nsimd = vobj::Nsimd();
|
||||||
|
|
||||||
|
assert(depth<=lds[dimension]); // A must be on neighbouring node
|
||||||
|
assert(depth>0); // A caller bug if zero
|
||||||
|
assert(ld+2*depth==nld);
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Face size and byte calculations
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
int buffer_size = 1;
|
||||||
|
for(int d=0;d<lds.size();d++){
|
||||||
|
if ( d!= dimension) buffer_size=buffer_size*lds[d];
|
||||||
|
}
|
||||||
|
buffer_size = buffer_size / Nsimd;
|
||||||
|
int rNsimd = Nsimd / simd[dimension];
|
||||||
|
assert( buffer_size == from.Grid()->_slice_nblock[dimension]*from.Grid()->_slice_block[dimension] / simd[dimension]);
|
||||||
|
|
||||||
|
static cshiftVector<vobj> send_buf;
|
||||||
|
static cshiftVector<vobj> recv_buf;
|
||||||
|
send_buf.resize(buffer_size*2*depth);
|
||||||
|
recv_buf.resize(buffer_size*2*depth);
|
||||||
|
|
||||||
|
std::vector<CommsRequest_t> fwd_req;
|
||||||
|
std::vector<CommsRequest_t> bwd_req;
|
||||||
|
|
||||||
|
int words = buffer_size;
|
||||||
|
int bytes = words * sizeof(vobj);
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Communication coords
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
int comm_proc = 1;
|
||||||
|
int xmit_to_rank;
|
||||||
|
int recv_from_rank;
|
||||||
|
grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Gather all surface terms up to depth "d"
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
RealD t;
|
||||||
|
int plane=0;
|
||||||
|
for ( int d=0;d < depth ; d ++ ) {
|
||||||
|
int tag = d*1024 + dimension*2+0;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
GatherSlice(send_buf,from,d,dimension,plane*buffer_size); plane++;
|
||||||
|
t_gather+=usecond()-t;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
grid->SendToRecvFromBegin(fwd_req,
|
||||||
|
(void *)&send_buf[d*buffer_size], xmit_to_rank,
|
||||||
|
(void *)&recv_buf[d*buffer_size], recv_from_rank, bytes, tag);
|
||||||
|
t_comms+=usecond()-t;
|
||||||
|
}
|
||||||
|
for ( int d=0;d < depth ; d ++ ) {
|
||||||
|
int tag = d*1024 + dimension*2+1;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
GatherSlice(send_buf,from,ld-depth+d,dimension,plane*buffer_size); plane++;
|
||||||
|
t_gather+= usecond() - t;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
grid->SendToRecvFromBegin(bwd_req,
|
||||||
|
(void *)&send_buf[(d+depth)*buffer_size], recv_from_rank,
|
||||||
|
(void *)&recv_buf[(d+depth)*buffer_size], xmit_to_rank, bytes,tag);
|
||||||
|
t_comms+=usecond()-t;
|
||||||
|
}
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Copy interior -- overlap this with comms
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
int Nd = new_grid->Nd();
|
||||||
|
Coordinate LL(Nd,0);
|
||||||
|
Coordinate sz = grid->_ldimensions;
|
||||||
|
Coordinate toLL(Nd,0);
|
||||||
|
toLL[dimension]=depth;
|
||||||
|
t=usecond();
|
||||||
|
localCopyRegion(from,to,LL,toLL,sz);
|
||||||
|
t_copy= usecond() - t;
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// Scatter all faces
|
||||||
|
////////////////////////////////////////////////////////////////////////////
|
||||||
|
// DumpSliceNorm(std::string("Face_exchange to before scatter"),to,dimension);
|
||||||
|
|
||||||
|
plane=0;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
grid->CommsComplete(fwd_req);
|
||||||
|
t_comms+= usecond() - t;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
for ( int d=0;d < depth ; d ++ ) {
|
||||||
|
ScatterSlice(recv_buf,to,nld-depth+d,dimension,plane*buffer_size); plane++;
|
||||||
|
}
|
||||||
|
t_scatter= usecond() - t;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
grid->CommsComplete(bwd_req);
|
||||||
|
t_comms+= usecond() - t;
|
||||||
|
|
||||||
|
t=usecond();
|
||||||
|
for ( int d=0;d < depth ; d ++ ) {
|
||||||
|
ScatterSlice(recv_buf,to,d,dimension,plane*buffer_size); plane++;
|
||||||
|
}
|
||||||
|
t_scatter+= usecond() - t;
|
||||||
|
// DumpSliceNorm(std::string("Face_exchange to scatter 1st "),to,dimension);
|
||||||
|
|
||||||
|
//DumpSliceNorm(std::string("Face_exchange to done"),to,dimension);
|
||||||
|
std::cout << GridLogPerformance << "PaddedCell::Expand new timings: gather :" << t_gather/1000 << "ms"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance << "PaddedCell::Expand new timings: gather :" << 2.0*bytes/t_gather << "MB/s"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "PaddedCell::Expand new timings: scatter:" << t_scatter/1000 << "ms"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance << "PaddedCell::Expand new timings: scatter:" << 2.0*bytes/t_scatter<< "MB/s"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "PaddedCell::Expand new timings: copy :" << t_copy/1000 << "ms"<<std::endl;
|
||||||
|
std::cout << GridLogPerformance << "PaddedCell::Expand new timings: comms :" << t_comms/1000 << "ms"<<std::endl;
|
||||||
|
// std::cout << GridLogPerformance << "PaddedCell::Expand new timings: comms :" << (RealD)4.0*bytes/t_comms << "MB/s"<<std::endl;
|
||||||
|
}
|
||||||
|
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|
||||||
NAMESPACE_END(Grid);
|
NAMESPACE_END(Grid);
|
||||||
|
|
||||||
|
|
||||||
|
@ -165,7 +165,7 @@ class BinaryIO {
|
|||||||
* FIXME -- 128^3 x 256 x 16 will overflow.
|
* FIXME -- 128^3 x 256 x 16 will overflow.
|
||||||
*/
|
*/
|
||||||
|
|
||||||
int global_site;
|
int64_t global_site;
|
||||||
|
|
||||||
Lexicographic::CoorFromIndex(coor,local_site,local_vol);
|
Lexicographic::CoorFromIndex(coor,local_site,local_vol);
|
||||||
|
|
||||||
@ -175,8 +175,8 @@ class BinaryIO {
|
|||||||
|
|
||||||
Lexicographic::IndexFromCoor(coor,global_site,global_vol);
|
Lexicographic::IndexFromCoor(coor,global_site,global_vol);
|
||||||
|
|
||||||
uint32_t gsite29 = global_site%29;
|
uint64_t gsite29 = global_site%29;
|
||||||
uint32_t gsite31 = global_site%31;
|
uint64_t gsite31 = global_site%31;
|
||||||
|
|
||||||
site_crc = crc32(0,(unsigned char *)site_buf,sizeof(fobj));
|
site_crc = crc32(0,(unsigned char *)site_buf,sizeof(fobj));
|
||||||
// std::cout << "Site "<<local_site << " crc "<<std::hex<<site_crc<<std::dec<<std::endl;
|
// std::cout << "Site "<<local_site << " crc "<<std::hex<<site_crc<<std::dec<<std::endl;
|
||||||
@ -545,7 +545,9 @@ class BinaryIO {
|
|||||||
const std::string &format,
|
const std::string &format,
|
||||||
uint32_t &nersc_csum,
|
uint32_t &nersc_csum,
|
||||||
uint32_t &scidac_csuma,
|
uint32_t &scidac_csuma,
|
||||||
uint32_t &scidac_csumb)
|
uint32_t &scidac_csumb,
|
||||||
|
int control=BINARYIO_LEXICOGRAPHIC
|
||||||
|
)
|
||||||
{
|
{
|
||||||
typedef typename vobj::scalar_object sobj;
|
typedef typename vobj::scalar_object sobj;
|
||||||
typedef typename vobj::Realified::scalar_type word; word w=0;
|
typedef typename vobj::Realified::scalar_type word; word w=0;
|
||||||
@ -556,7 +558,7 @@ class BinaryIO {
|
|||||||
std::vector<sobj> scalardata(lsites);
|
std::vector<sobj> scalardata(lsites);
|
||||||
std::vector<fobj> iodata(lsites); // Munge, checksum, byte order in here
|
std::vector<fobj> iodata(lsites); // Munge, checksum, byte order in here
|
||||||
|
|
||||||
IOobject(w,grid,iodata,file,offset,format,BINARYIO_READ|BINARYIO_LEXICOGRAPHIC,
|
IOobject(w,grid,iodata,file,offset,format,BINARYIO_READ|control,
|
||||||
nersc_csum,scidac_csuma,scidac_csumb);
|
nersc_csum,scidac_csuma,scidac_csumb);
|
||||||
|
|
||||||
GridStopWatch timer;
|
GridStopWatch timer;
|
||||||
@ -582,7 +584,8 @@ class BinaryIO {
|
|||||||
const std::string &format,
|
const std::string &format,
|
||||||
uint32_t &nersc_csum,
|
uint32_t &nersc_csum,
|
||||||
uint32_t &scidac_csuma,
|
uint32_t &scidac_csuma,
|
||||||
uint32_t &scidac_csumb)
|
uint32_t &scidac_csumb,
|
||||||
|
int control=BINARYIO_LEXICOGRAPHIC)
|
||||||
{
|
{
|
||||||
typedef typename vobj::scalar_object sobj;
|
typedef typename vobj::scalar_object sobj;
|
||||||
typedef typename vobj::Realified::scalar_type word; word w=0;
|
typedef typename vobj::Realified::scalar_type word; word w=0;
|
||||||
@ -607,7 +610,7 @@ class BinaryIO {
|
|||||||
while (attemptsLeft >= 0)
|
while (attemptsLeft >= 0)
|
||||||
{
|
{
|
||||||
grid->Barrier();
|
grid->Barrier();
|
||||||
IOobject(w,grid,iodata,file,offset,format,BINARYIO_WRITE|BINARYIO_LEXICOGRAPHIC,
|
IOobject(w,grid,iodata,file,offset,format,BINARYIO_WRITE|control,
|
||||||
nersc_csum,scidac_csuma,scidac_csumb);
|
nersc_csum,scidac_csuma,scidac_csumb);
|
||||||
if (checkWrite)
|
if (checkWrite)
|
||||||
{
|
{
|
||||||
@ -617,7 +620,7 @@ class BinaryIO {
|
|||||||
|
|
||||||
std::cout << GridLogMessage << "writeLatticeObject: read back object" << std::endl;
|
std::cout << GridLogMessage << "writeLatticeObject: read back object" << std::endl;
|
||||||
grid->Barrier();
|
grid->Barrier();
|
||||||
IOobject(w,grid,ckiodata,file,ckoffset,format,BINARYIO_READ|BINARYIO_LEXICOGRAPHIC,
|
IOobject(w,grid,ckiodata,file,ckoffset,format,BINARYIO_READ|control,
|
||||||
cknersc_csum,ckscidac_csuma,ckscidac_csumb);
|
cknersc_csum,ckscidac_csuma,ckscidac_csumb);
|
||||||
if ((cknersc_csum != nersc_csum) or (ckscidac_csuma != scidac_csuma) or (ckscidac_csumb != scidac_csumb))
|
if ((cknersc_csum != nersc_csum) or (ckscidac_csuma != scidac_csuma) or (ckscidac_csumb != scidac_csumb))
|
||||||
{
|
{
|
||||||
|
@ -206,7 +206,7 @@ class GridLimeReader : public BinaryIO {
|
|||||||
// Read a generic lattice field and verify checksum
|
// Read a generic lattice field and verify checksum
|
||||||
////////////////////////////////////////////
|
////////////////////////////////////////////
|
||||||
template<class vobj>
|
template<class vobj>
|
||||||
void readLimeLatticeBinaryObject(Lattice<vobj> &field,std::string record_name)
|
void readLimeLatticeBinaryObject(Lattice<vobj> &field,std::string record_name,int control=BINARYIO_LEXICOGRAPHIC)
|
||||||
{
|
{
|
||||||
typedef typename vobj::scalar_object sobj;
|
typedef typename vobj::scalar_object sobj;
|
||||||
scidacChecksum scidacChecksum_;
|
scidacChecksum scidacChecksum_;
|
||||||
@ -238,7 +238,7 @@ class GridLimeReader : public BinaryIO {
|
|||||||
uint64_t offset= ftello(File);
|
uint64_t offset= ftello(File);
|
||||||
// std::cout << " ReadLatticeObject from offset "<<offset << std::endl;
|
// std::cout << " ReadLatticeObject from offset "<<offset << std::endl;
|
||||||
BinarySimpleMunger<sobj,sobj> munge;
|
BinarySimpleMunger<sobj,sobj> munge;
|
||||||
BinaryIO::readLatticeObject< vobj, sobj >(field, filename, munge, offset, format,nersc_csum,scidac_csuma,scidac_csumb);
|
BinaryIO::readLatticeObject< vobj, sobj >(field, filename, munge, offset, format,nersc_csum,scidac_csuma,scidac_csumb,control);
|
||||||
std::cout << GridLogMessage << "SciDAC checksum A " << std::hex << scidac_csuma << std::dec << std::endl;
|
std::cout << GridLogMessage << "SciDAC checksum A " << std::hex << scidac_csuma << std::dec << std::endl;
|
||||||
std::cout << GridLogMessage << "SciDAC checksum B " << std::hex << scidac_csumb << std::dec << std::endl;
|
std::cout << GridLogMessage << "SciDAC checksum B " << std::hex << scidac_csumb << std::dec << std::endl;
|
||||||
/////////////////////////////////////////////
|
/////////////////////////////////////////////
|
||||||
@ -408,7 +408,7 @@ class GridLimeWriter : public BinaryIO
|
|||||||
// in communicator used by the field.Grid()
|
// in communicator used by the field.Grid()
|
||||||
////////////////////////////////////////////////////
|
////////////////////////////////////////////////////
|
||||||
template<class vobj>
|
template<class vobj>
|
||||||
void writeLimeLatticeBinaryObject(Lattice<vobj> &field,std::string record_name)
|
void writeLimeLatticeBinaryObject(Lattice<vobj> &field,std::string record_name,int control=BINARYIO_LEXICOGRAPHIC)
|
||||||
{
|
{
|
||||||
////////////////////////////////////////////////////////////////////
|
////////////////////////////////////////////////////////////////////
|
||||||
// NB: FILE and iostream are jointly writing disjoint sequences in the
|
// NB: FILE and iostream are jointly writing disjoint sequences in the
|
||||||
@ -459,7 +459,7 @@ class GridLimeWriter : public BinaryIO
|
|||||||
///////////////////////////////////////////
|
///////////////////////////////////////////
|
||||||
std::string format = getFormatString<vobj>();
|
std::string format = getFormatString<vobj>();
|
||||||
BinarySimpleMunger<sobj,sobj> munge;
|
BinarySimpleMunger<sobj,sobj> munge;
|
||||||
BinaryIO::writeLatticeObject<vobj,sobj>(field, filename, munge, offset1, format,nersc_csum,scidac_csuma,scidac_csumb);
|
BinaryIO::writeLatticeObject<vobj,sobj>(field, filename, munge, offset1, format,nersc_csum,scidac_csuma,scidac_csumb,control);
|
||||||
|
|
||||||
///////////////////////////////////////////
|
///////////////////////////////////////////
|
||||||
// Wind forward and close the record
|
// Wind forward and close the record
|
||||||
@ -512,7 +512,8 @@ class ScidacWriter : public GridLimeWriter {
|
|||||||
////////////////////////////////////////////////
|
////////////////////////////////////////////////
|
||||||
template <class vobj, class userRecord>
|
template <class vobj, class userRecord>
|
||||||
void writeScidacFieldRecord(Lattice<vobj> &field,userRecord _userRecord,
|
void writeScidacFieldRecord(Lattice<vobj> &field,userRecord _userRecord,
|
||||||
const unsigned int recordScientificPrec = 0)
|
const unsigned int recordScientificPrec = 0,
|
||||||
|
int control=BINARYIO_LEXICOGRAPHIC)
|
||||||
{
|
{
|
||||||
GridBase * grid = field.Grid();
|
GridBase * grid = field.Grid();
|
||||||
|
|
||||||
@ -534,7 +535,7 @@ class ScidacWriter : public GridLimeWriter {
|
|||||||
writeLimeObject(0,0,_scidacRecord,_scidacRecord.SerialisableClassName(),std::string(SCIDAC_PRIVATE_RECORD_XML));
|
writeLimeObject(0,0,_scidacRecord,_scidacRecord.SerialisableClassName(),std::string(SCIDAC_PRIVATE_RECORD_XML));
|
||||||
}
|
}
|
||||||
// Collective call
|
// Collective call
|
||||||
writeLimeLatticeBinaryObject(field,std::string(ILDG_BINARY_DATA)); // Closes message with checksum
|
writeLimeLatticeBinaryObject(field,std::string(ILDG_BINARY_DATA),control); // Closes message with checksum
|
||||||
}
|
}
|
||||||
};
|
};
|
||||||
|
|
||||||
@ -553,7 +554,8 @@ class ScidacReader : public GridLimeReader {
|
|||||||
// Write generic lattice field in scidac format
|
// Write generic lattice field in scidac format
|
||||||
////////////////////////////////////////////////
|
////////////////////////////////////////////////
|
||||||
template <class vobj, class userRecord>
|
template <class vobj, class userRecord>
|
||||||
void readScidacFieldRecord(Lattice<vobj> &field,userRecord &_userRecord)
|
void readScidacFieldRecord(Lattice<vobj> &field,userRecord &_userRecord,
|
||||||
|
int control=BINARYIO_LEXICOGRAPHIC)
|
||||||
{
|
{
|
||||||
typedef typename vobj::scalar_object sobj;
|
typedef typename vobj::scalar_object sobj;
|
||||||
GridBase * grid = field.Grid();
|
GridBase * grid = field.Grid();
|
||||||
@ -571,7 +573,7 @@ class ScidacReader : public GridLimeReader {
|
|||||||
readLimeObject(header ,std::string("FieldMetaData"),std::string(GRID_FORMAT)); // Open message
|
readLimeObject(header ,std::string("FieldMetaData"),std::string(GRID_FORMAT)); // Open message
|
||||||
readLimeObject(_userRecord,_userRecord.SerialisableClassName(),std::string(SCIDAC_RECORD_XML));
|
readLimeObject(_userRecord,_userRecord.SerialisableClassName(),std::string(SCIDAC_RECORD_XML));
|
||||||
readLimeObject(_scidacRecord,_scidacRecord.SerialisableClassName(),std::string(SCIDAC_PRIVATE_RECORD_XML));
|
readLimeObject(_scidacRecord,_scidacRecord.SerialisableClassName(),std::string(SCIDAC_PRIVATE_RECORD_XML));
|
||||||
readLimeLatticeBinaryObject(field,std::string(ILDG_BINARY_DATA));
|
readLimeLatticeBinaryObject(field,std::string(ILDG_BINARY_DATA),control);
|
||||||
}
|
}
|
||||||
void skipPastBinaryRecord(void) {
|
void skipPastBinaryRecord(void) {
|
||||||
std::string rec_name(ILDG_BINARY_DATA);
|
std::string rec_name(ILDG_BINARY_DATA);
|
||||||
|
@ -487,7 +487,7 @@ public:
|
|||||||
for(int mu=0;mu<Nd;mu++){
|
for(int mu=0;mu<Nd;mu++){
|
||||||
{ //view scope
|
{ //view scope
|
||||||
autoView( gStaple_v , gStaple, AcceleratorWrite);
|
autoView( gStaple_v , gStaple, AcceleratorWrite);
|
||||||
auto gStencil_v = gStencil.View();
|
auto gStencil_v = gStencil.View(AcceleratorRead);
|
||||||
|
|
||||||
accelerator_for(ss, ggrid->oSites(), ggrid->Nsimd(), {
|
accelerator_for(ss, ggrid->oSites(), ggrid->Nsimd(), {
|
||||||
decltype(coalescedRead(Ug_dirs_v[0][0])) stencil_ss;
|
decltype(coalescedRead(Ug_dirs_v[0][0])) stencil_ss;
|
||||||
@ -1199,7 +1199,7 @@ public:
|
|||||||
|
|
||||||
{ //view scope
|
{ //view scope
|
||||||
autoView( gStaple_v , gStaple, AcceleratorWrite);
|
autoView( gStaple_v , gStaple, AcceleratorWrite);
|
||||||
auto gStencil_v = gStencil.View();
|
auto gStencil_v = gStencil.View(AcceleratorRead);
|
||||||
|
|
||||||
accelerator_for(ss, ggrid->oSites(), ggrid->Nsimd(), {
|
accelerator_for(ss, ggrid->oSites(), ggrid->Nsimd(), {
|
||||||
decltype(coalescedRead(Ug_dirs_v[0][0])) stencil_ss;
|
decltype(coalescedRead(Ug_dirs_v[0][0])) stencil_ss;
|
||||||
|
@ -1130,6 +1130,14 @@ static_assert(sizeof(SIMD_Ftype) == sizeof(SIMD_Itype), "SIMD vector lengths inc
|
|||||||
#endif
|
#endif
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
// Fixme need coalesced read gpermute
|
||||||
|
template<class vobj> void gpermute(vobj & inout,int perm){
|
||||||
|
vobj tmp=inout;
|
||||||
|
if (perm & 0x1 ) { permute(inout,tmp,0); tmp=inout;}
|
||||||
|
if (perm & 0x2 ) { permute(inout,tmp,1); tmp=inout;}
|
||||||
|
if (perm & 0x4 ) { permute(inout,tmp,2); tmp=inout;}
|
||||||
|
if (perm & 0x8 ) { permute(inout,tmp,3); tmp=inout;}
|
||||||
|
}
|
||||||
|
|
||||||
NAMESPACE_END(Grid);
|
NAMESPACE_END(Grid);
|
||||||
|
|
||||||
|
@ -46,7 +46,7 @@ class GeneralLocalStencilView {
|
|||||||
accelerator_inline GeneralStencilEntry * GetEntry(int point,int osite) {
|
accelerator_inline GeneralStencilEntry * GetEntry(int point,int osite) {
|
||||||
return & this->_entries_p[point+this->_npoints*osite];
|
return & this->_entries_p[point+this->_npoints*osite];
|
||||||
}
|
}
|
||||||
|
void ViewClose(void){};
|
||||||
};
|
};
|
||||||
////////////////////////////////////////
|
////////////////////////////////////////
|
||||||
// The Stencil Class itself
|
// The Stencil Class itself
|
||||||
@ -61,7 +61,7 @@ protected:
|
|||||||
public:
|
public:
|
||||||
GridBase *Grid(void) const { return _grid; }
|
GridBase *Grid(void) const { return _grid; }
|
||||||
|
|
||||||
View_type View(void) const {
|
View_type View(int mode) const {
|
||||||
View_type accessor(*( (View_type *) this));
|
View_type accessor(*( (View_type *) this));
|
||||||
return accessor;
|
return accessor;
|
||||||
}
|
}
|
||||||
|
@ -137,6 +137,18 @@ inline void cuda_mem(void)
|
|||||||
dim3 cu_blocks ((num1+nt-1)/nt,num2,1); \
|
dim3 cu_blocks ((num1+nt-1)/nt,num2,1); \
|
||||||
LambdaApply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,nsimd,lambda); \
|
LambdaApply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,nsimd,lambda); \
|
||||||
}
|
}
|
||||||
|
#define prof_accelerator_for2dNB( iter1, num1, iter2, num2, nsimd, ... ) \
|
||||||
|
{ \
|
||||||
|
int nt=acceleratorThreads(); \
|
||||||
|
typedef uint64_t Iterator; \
|
||||||
|
auto lambda = [=] accelerator \
|
||||||
|
(Iterator iter1,Iterator iter2,Iterator lane) mutable { \
|
||||||
|
__VA_ARGS__; \
|
||||||
|
}; \
|
||||||
|
dim3 cu_threads(nsimd,acceleratorThreads(),1); \
|
||||||
|
dim3 cu_blocks ((num1+nt-1)/nt,num2,1); \
|
||||||
|
ProfileLambdaApply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,nsimd,lambda); \
|
||||||
|
}
|
||||||
|
|
||||||
#define accelerator_for6dNB(iter1, num1, \
|
#define accelerator_for6dNB(iter1, num1, \
|
||||||
iter2, num2, \
|
iter2, num2, \
|
||||||
@ -157,6 +169,20 @@ inline void cuda_mem(void)
|
|||||||
Lambda6Apply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,num3,num4,num5,num6,lambda); \
|
Lambda6Apply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,num3,num4,num5,num6,lambda); \
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
|
#define accelerator_for2dNB( iter1, num1, iter2, num2, nsimd, ... ) \
|
||||||
|
{ \
|
||||||
|
int nt=acceleratorThreads(); \
|
||||||
|
typedef uint64_t Iterator; \
|
||||||
|
auto lambda = [=] accelerator \
|
||||||
|
(Iterator iter1,Iterator iter2,Iterator lane) mutable { \
|
||||||
|
__VA_ARGS__; \
|
||||||
|
}; \
|
||||||
|
dim3 cu_threads(nsimd,acceleratorThreads(),1); \
|
||||||
|
dim3 cu_blocks ((num1+nt-1)/nt,num2,1); \
|
||||||
|
LambdaApply<<<cu_blocks,cu_threads,0,computeStream>>>(num1,num2,nsimd,lambda); \
|
||||||
|
}
|
||||||
|
|
||||||
template<typename lambda> __global__
|
template<typename lambda> __global__
|
||||||
void LambdaApply(uint64_t num1, uint64_t num2, uint64_t num3, lambda Lambda)
|
void LambdaApply(uint64_t num1, uint64_t num2, uint64_t num3, lambda Lambda)
|
||||||
{
|
{
|
||||||
@ -168,6 +194,17 @@ void LambdaApply(uint64_t num1, uint64_t num2, uint64_t num3, lambda Lambda)
|
|||||||
Lambda(x,y,z);
|
Lambda(x,y,z);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
template<typename lambda> __global__
|
||||||
|
void ProfileLambdaApply(uint64_t num1, uint64_t num2, uint64_t num3, lambda Lambda)
|
||||||
|
{
|
||||||
|
// Weird permute is to make lane coalesce for large blocks
|
||||||
|
uint64_t x = threadIdx.y + blockDim.y*blockIdx.x;
|
||||||
|
uint64_t y = threadIdx.z + blockDim.z*blockIdx.y;
|
||||||
|
uint64_t z = threadIdx.x;
|
||||||
|
if ( (x < num1) && (y<num2) && (z<num3) ) {
|
||||||
|
Lambda(x,y,z);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
template<typename lambda> __global__
|
template<typename lambda> __global__
|
||||||
void Lambda6Apply(uint64_t num1, uint64_t num2, uint64_t num3,
|
void Lambda6Apply(uint64_t num1, uint64_t num2, uint64_t num3,
|
||||||
@ -208,6 +245,7 @@ inline void *acceleratorAllocShared(size_t bytes)
|
|||||||
if( err != cudaSuccess ) {
|
if( err != cudaSuccess ) {
|
||||||
ptr = (void *) NULL;
|
ptr = (void *) NULL;
|
||||||
printf(" cudaMallocManaged failed for %d %s \n",bytes,cudaGetErrorString(err));
|
printf(" cudaMallocManaged failed for %d %s \n",bytes,cudaGetErrorString(err));
|
||||||
|
assert(0);
|
||||||
}
|
}
|
||||||
return ptr;
|
return ptr;
|
||||||
};
|
};
|
||||||
@ -460,6 +498,9 @@ inline void acceleratorCopySynchronise(void) { hipStreamSynchronize(copyStream);
|
|||||||
#if defined(GRID_SYCL) || defined(GRID_CUDA) || defined(GRID_HIP)
|
#if defined(GRID_SYCL) || defined(GRID_CUDA) || defined(GRID_HIP)
|
||||||
// FIXME -- the non-blocking nature got broken March 30 2023 by PAB
|
// FIXME -- the non-blocking nature got broken March 30 2023 by PAB
|
||||||
#define accelerator_forNB( iter1, num1, nsimd, ... ) accelerator_for2dNB( iter1, num1, iter2, 1, nsimd, {__VA_ARGS__} );
|
#define accelerator_forNB( iter1, num1, nsimd, ... ) accelerator_for2dNB( iter1, num1, iter2, 1, nsimd, {__VA_ARGS__} );
|
||||||
|
#define prof_accelerator_for( iter1, num1, nsimd, ... ) \
|
||||||
|
prof_accelerator_for2dNB( iter1, num1, iter2, 1, nsimd, {__VA_ARGS__} );\
|
||||||
|
accelerator_barrier(dummy);
|
||||||
|
|
||||||
#define accelerator_for( iter, num, nsimd, ... ) \
|
#define accelerator_for( iter, num, nsimd, ... ) \
|
||||||
accelerator_forNB(iter, num, nsimd, { __VA_ARGS__ } ); \
|
accelerator_forNB(iter, num, nsimd, { __VA_ARGS__ } ); \
|
||||||
|
@ -94,6 +94,13 @@ static constexpr int MaxDims = GRID_MAX_LATTICE_DIMENSION;
|
|||||||
|
|
||||||
typedef AcceleratorVector<int,MaxDims> Coordinate;
|
typedef AcceleratorVector<int,MaxDims> Coordinate;
|
||||||
|
|
||||||
|
template<class T,int _ndim>
|
||||||
|
inline bool operator==(const AcceleratorVector<T,_ndim> &v,const AcceleratorVector<T,_ndim> &w)
|
||||||
|
{
|
||||||
|
if (v.size()!=w.size()) return false;
|
||||||
|
for(int i=0;i<v.size();i++) if ( v[i]!=w[i] ) return false;
|
||||||
|
return true;
|
||||||
|
}
|
||||||
template<class T,int _ndim>
|
template<class T,int _ndim>
|
||||||
inline std::ostream & operator<<(std::ostream &os, const AcceleratorVector<T,_ndim> &v)
|
inline std::ostream & operator<<(std::ostream &os, const AcceleratorVector<T,_ndim> &v)
|
||||||
{
|
{
|
||||||
|
@ -283,6 +283,7 @@ void GridBanner(void)
|
|||||||
std::cout << "Build " << GRID_BUILD_STR(GRID_BUILD_REF) << std::endl;
|
std::cout << "Build " << GRID_BUILD_STR(GRID_BUILD_REF) << std::endl;
|
||||||
#endif
|
#endif
|
||||||
std::cout << std::endl;
|
std::cout << std::endl;
|
||||||
|
std::cout << std::setprecision(9);
|
||||||
}
|
}
|
||||||
|
|
||||||
void Grid_init(int *argc,char ***argv)
|
void Grid_init(int *argc,char ***argv)
|
||||||
|
@ -8,7 +8,7 @@ namespace Grid{
|
|||||||
public:
|
public:
|
||||||
|
|
||||||
template<class coor_t>
|
template<class coor_t>
|
||||||
static accelerator_inline void CoorFromIndex (coor_t& coor,int index,const coor_t &dims){
|
static accelerator_inline void CoorFromIndex (coor_t& coor,int64_t index,const coor_t &dims){
|
||||||
int nd= dims.size();
|
int nd= dims.size();
|
||||||
coor.resize(nd);
|
coor.resize(nd);
|
||||||
for(int d=0;d<nd;d++){
|
for(int d=0;d<nd;d++){
|
||||||
@ -18,28 +18,45 @@ namespace Grid{
|
|||||||
}
|
}
|
||||||
|
|
||||||
template<class coor_t>
|
template<class coor_t>
|
||||||
static accelerator_inline void IndexFromCoor (const coor_t& coor,int &index,const coor_t &dims){
|
static accelerator_inline void IndexFromCoor (const coor_t& coor,int64_t &index,const coor_t &dims){
|
||||||
int nd=dims.size();
|
int nd=dims.size();
|
||||||
int stride=1;
|
int stride=1;
|
||||||
index=0;
|
index=0;
|
||||||
for(int d=0;d<nd;d++){
|
for(int d=0;d<nd;d++){
|
||||||
index = index+stride*coor[d];
|
index = index+(int64_t)stride*coor[d];
|
||||||
stride=stride*dims[d];
|
stride=stride*dims[d];
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
template<class coor_t>
|
||||||
|
static accelerator_inline void IndexFromCoor (const coor_t& coor,int &index,const coor_t &dims){
|
||||||
|
int64_t index64;
|
||||||
|
IndexFromCoor(coor,index64,dims);
|
||||||
|
assert(index64<2*1024*1024*1024LL);
|
||||||
|
index = (int) index64;
|
||||||
|
}
|
||||||
|
|
||||||
template<class coor_t>
|
template<class coor_t>
|
||||||
static inline void IndexFromCoorReversed (const coor_t& coor,int &index,const coor_t &dims){
|
static inline void IndexFromCoorReversed (const coor_t& coor,int64_t &index,const coor_t &dims){
|
||||||
int nd=dims.size();
|
int nd=dims.size();
|
||||||
int stride=1;
|
int stride=1;
|
||||||
index=0;
|
index=0;
|
||||||
for(int d=nd-1;d>=0;d--){
|
for(int d=nd-1;d>=0;d--){
|
||||||
index = index+stride*coor[d];
|
index = index+(int64_t)stride*coor[d];
|
||||||
stride=stride*dims[d];
|
stride=stride*dims[d];
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
template<class coor_t>
|
template<class coor_t>
|
||||||
static inline void CoorFromIndexReversed (coor_t& coor,int index,const coor_t &dims){
|
static inline void IndexFromCoorReversed (const coor_t& coor,int &index,const coor_t &dims){
|
||||||
|
int64_t index64;
|
||||||
|
IndexFromCoorReversed(coor,index64,dims);
|
||||||
|
if ( index64>=2*1024*1024*1024LL ){
|
||||||
|
std::cout << " IndexFromCoorReversed " << coor<<" index " << index64<< " dims "<<dims<<std::endl;
|
||||||
|
}
|
||||||
|
assert(index64<2*1024*1024*1024LL);
|
||||||
|
index = (int) index64;
|
||||||
|
}
|
||||||
|
template<class coor_t>
|
||||||
|
static inline void CoorFromIndexReversed (coor_t& coor,int64_t index,const coor_t &dims){
|
||||||
int nd= dims.size();
|
int nd= dims.size();
|
||||||
coor.resize(nd);
|
coor.resize(nd);
|
||||||
for(int d=nd-1;d>=0;d--){
|
for(int d=nd-1;d>=0;d--){
|
||||||
|
44
scripts/prequisites.sh
Executable file
44
scripts/prequisites.sh
Executable file
@ -0,0 +1,44 @@
|
|||||||
|
#!/bin/bash
|
||||||
|
|
||||||
|
if [ $1 = "install" ]
|
||||||
|
then
|
||||||
|
dir=`pwd`
|
||||||
|
cd $HOME
|
||||||
|
git clone -c feature.manyFiles=true https://github.com/spack/spack.git
|
||||||
|
source $HOME/spack/share/spack/setup-env.sh
|
||||||
|
|
||||||
|
spack install autoconf
|
||||||
|
spack install automake
|
||||||
|
spack install c-lime cppflags=-fPIE
|
||||||
|
spack install fftw
|
||||||
|
spack install llvm
|
||||||
|
spack install gmp
|
||||||
|
spack install mpfr
|
||||||
|
spack install cuda@11.8
|
||||||
|
spack install openmpi
|
||||||
|
spack install openssl
|
||||||
|
spack install hdf5
|
||||||
|
else
|
||||||
|
source $HOME/spack/share/spack/setup-env.sh
|
||||||
|
fi
|
||||||
|
|
||||||
|
spack load autoconf
|
||||||
|
spack load automake
|
||||||
|
spack load c-lime
|
||||||
|
spack load fftw
|
||||||
|
spack load llvm
|
||||||
|
spack load gmp
|
||||||
|
spack load mpfr
|
||||||
|
spack load cuda@11.8
|
||||||
|
spack load openmpi
|
||||||
|
spack load openssl
|
||||||
|
spack load hdf5
|
||||||
|
|
||||||
|
export FFTW=`spack find --paths fftw | grep ^fftw | awk '{print $2}' `
|
||||||
|
export HDF5=`spack find --paths hdf5 | grep ^hdf5 | awk '{print $2}' `
|
||||||
|
export CLIME=`spack find --paths c-lime | grep ^c-lime | awk '{print $2}' `
|
||||||
|
export MPFR=`spack find --paths mpfr | grep ^mpfr | awk '{print $2}' `
|
||||||
|
export GMP=`spack find --paths gmp | grep ^gmp | awk '{print $2}' `
|
||||||
|
export NVIDIA=$CUDA_HOME
|
||||||
|
export NVIDIALIB=$NVIDIA/targets/x86_64-linux/lib/
|
||||||
|
export LD_LIBRARY_PATH=$NVIDIALIB:$FFTW/lib/:$MPFR/lib:$LD_LIBRARY_PATH
|
43
systems/Frontier/benchmarks/bench2.slurm
Executable file
43
systems/Frontier/benchmarks/bench2.slurm
Executable file
@ -0,0 +1,43 @@
|
|||||||
|
#!/bin/bash -l
|
||||||
|
#SBATCH --job-name=bench
|
||||||
|
##SBATCH --partition=small-g
|
||||||
|
#SBATCH --nodes=2
|
||||||
|
#SBATCH --ntasks-per-node=8
|
||||||
|
#SBATCH --cpus-per-task=7
|
||||||
|
#SBATCH --gpus-per-node=8
|
||||||
|
#SBATCH --time=00:10:00
|
||||||
|
#SBATCH --account=phy157_dwf
|
||||||
|
#SBATCH --gpu-bind=none
|
||||||
|
#SBATCH --exclusive
|
||||||
|
#SBATCH --mem=0
|
||||||
|
|
||||||
|
cat << EOF > select_gpu
|
||||||
|
#!/bin/bash
|
||||||
|
export GPU_MAP=(0 1 2 3 7 6 5 4)
|
||||||
|
export NUMA_MAP=(3 3 1 1 2 2 0 0)
|
||||||
|
export GPU=\${GPU_MAP[\$SLURM_LOCALID]}
|
||||||
|
export NUMA=\${NUMA_MAP[\$SLURM_LOCALID]}
|
||||||
|
export HIP_VISIBLE_DEVICES=\$GPU
|
||||||
|
unset ROCR_VISIBLE_DEVICES
|
||||||
|
echo RANK \$SLURM_LOCALID using GPU \$GPU
|
||||||
|
exec numactl -m \$NUMA -N \$NUMA \$*
|
||||||
|
EOF
|
||||||
|
|
||||||
|
chmod +x ./select_gpu
|
||||||
|
|
||||||
|
root=$HOME/Frontier/Grid/systems/Frontier/
|
||||||
|
source ${root}/sourceme.sh
|
||||||
|
|
||||||
|
export OMP_NUM_THREADS=7
|
||||||
|
export MPICH_GPU_SUPPORT_ENABLED=1
|
||||||
|
export MPICH_SMP_SINGLE_COPY_MODE=XPMEM
|
||||||
|
|
||||||
|
for vol in 32.32.32.64
|
||||||
|
do
|
||||||
|
srun ./select_gpu ./Benchmark_dwf_fp32 --mpi 2.2.2.2 --accelerator-threads 8 --comms-overlap --shm 2048 --shm-mpi 0 --grid $vol > log.shm0.ov.$vol
|
||||||
|
srun ./select_gpu ./Benchmark_dwf_fp32 --mpi 2.2.2.2 --accelerator-threads 8 --comms-overlap --shm 2048 --shm-mpi 1 --grid $vol > log.shm1.ov.$vol
|
||||||
|
|
||||||
|
srun ./select_gpu ./Benchmark_dwf_fp32 --mpi 2.2.2.2 --accelerator-threads 8 --comms-sequential --shm 2048 --shm-mpi 0 --grid $vol > log.shm0.seq.$vol
|
||||||
|
srun ./select_gpu ./Benchmark_dwf_fp32 --mpi 2.2.2.2 --accelerator-threads 8 --comms-sequential --shm 2048 --shm-mpi 1 --grid $vol > log.shm1.seq.$vol
|
||||||
|
done
|
||||||
|
|
23
systems/Frontier/config-command
Normal file
23
systems/Frontier/config-command
Normal file
@ -0,0 +1,23 @@
|
|||||||
|
CLIME=`spack find --paths c-lime@2-3-9 | grep c-lime| cut -c 15-`
|
||||||
|
../../configure --enable-comms=mpi-auto \
|
||||||
|
--with-lime=$CLIME \
|
||||||
|
--enable-unified=no \
|
||||||
|
--enable-shm=nvlink \
|
||||||
|
--enable-tracing=timer \
|
||||||
|
--enable-accelerator=hip \
|
||||||
|
--enable-gen-simd-width=64 \
|
||||||
|
--disable-gparity \
|
||||||
|
--disable-fermion-reps \
|
||||||
|
--enable-simd=GPU \
|
||||||
|
--enable-accelerator-cshift \
|
||||||
|
--with-gmp=$OLCF_GMP_ROOT \
|
||||||
|
--with-fftw=$FFTW_DIR/.. \
|
||||||
|
--with-mpfr=/opt/cray/pe/gcc/mpfr/3.1.4/ \
|
||||||
|
--disable-fermion-reps \
|
||||||
|
CXX=hipcc MPICXX=mpicxx \
|
||||||
|
CXXFLAGS="-fPIC -I{$ROCM_PATH}/include/ -std=c++14 -I${MPICH_DIR}/include -L/lib64 " \
|
||||||
|
LDFLAGS="-L/lib64 -L${MPICH_DIR}/lib -lmpi -L${CRAY_MPICH_ROOTDIR}/gtl/lib -lmpi_gtl_hsa -lamdhip64 "
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
13
systems/Frontier/mpiwrapper.sh
Executable file
13
systems/Frontier/mpiwrapper.sh
Executable file
@ -0,0 +1,13 @@
|
|||||||
|
#!/bin/bash
|
||||||
|
|
||||||
|
lrank=$SLURM_LOCALID
|
||||||
|
lgpu=(0 1 2 3 7 6 5 4)
|
||||||
|
|
||||||
|
export ROCR_VISIBLE_DEVICES=${lgpu[$lrank]}
|
||||||
|
|
||||||
|
echo "`hostname` - $lrank device=$ROCR_VISIBLE_DEVICES "
|
||||||
|
|
||||||
|
$*
|
||||||
|
|
||||||
|
|
||||||
|
|
13
systems/Frontier/sourceme.sh
Normal file
13
systems/Frontier/sourceme.sh
Normal file
@ -0,0 +1,13 @@
|
|||||||
|
. /autofs/nccs-svm1_home1/paboyle/Crusher/Grid/spack/share/spack/setup-env.sh
|
||||||
|
spack load c-lime
|
||||||
|
#export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/sw/crusher/spack-envs/base/opt/cray-sles15-zen3/gcc-11.2.0/gperftools-2.9.1-72ubwtuc5wcz2meqltbfdb76epufgzo2/lib
|
||||||
|
module load emacs
|
||||||
|
module load PrgEnv-gnu
|
||||||
|
module load rocm
|
||||||
|
module load cray-mpich/8.1.23
|
||||||
|
module load gmp
|
||||||
|
module load cray-fftw
|
||||||
|
module load craype-accel-amd-gfx90a
|
||||||
|
export LD_LIBRARY_PATH=/opt/gcc/mpfr/3.1.4/lib:$LD_LIBRARY_PATH
|
||||||
|
#Hack for lib
|
||||||
|
#export LD_LIBRARY_PATH=`pwd`:$LD_LIBRARY_PATH
|
9
systems/Frontier/wrap.sh
Executable file
9
systems/Frontier/wrap.sh
Executable file
@ -0,0 +1,9 @@
|
|||||||
|
#!/bin/sh
|
||||||
|
|
||||||
|
export HIP_VISIBLE_DEVICES=$ROCR_VISIBLE_DEVICES
|
||||||
|
unset ROCR_VISIBLE_DEVICES
|
||||||
|
|
||||||
|
#rank=$SLURM_PROCID
|
||||||
|
#rocprof -d rocprof.$rank -o rocprof.$rank/results.rank$SLURM_PROCID.csv --sys-trace $@
|
||||||
|
|
||||||
|
$@
|
@ -1,4 +1,3 @@
|
|||||||
BREW=/opt/local/
|
BREW=/opt/local/
|
||||||
MPICXX=mpicxx ../../configure --enable-simd=GEN --enable-comms=mpi-auto --enable-unified=yes --prefix $HOME/QCD/GridInstall --with-lime=/Users/peterboyle/QCD/SciDAC/install/ --with-openssl=$BREW --disable-fermion-reps --disable-gparity --disable-debug
|
MPICXX=mpicxx ../../configure --enable-simd=GEN --enable-comms=mpi-auto --enable-unified=yes --prefix $HOME/QCD/GridInstall --with-lime=/Users/peterboyle/QCD/SciDAC/install/ --with-openssl=$BREW --disable-fermion-reps --disable-gparity --disable-debug
|
||||||
|
|
||||||
|
|
||||||
|
235
tests/debug/Test_general_coarse.cc
Normal file
235
tests/debug/Test_general_coarse.cc
Normal file
@ -0,0 +1,235 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./tests/Test_padded_cell.cc
|
||||||
|
|
||||||
|
Copyright (C) 2023
|
||||||
|
|
||||||
|
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#include <Grid/Grid.h>
|
||||||
|
#include <Grid/lattice/PaddedCell.h>
|
||||||
|
#include <Grid/stencil/GeneralLocalStencil.h>
|
||||||
|
|
||||||
|
#include <Grid/algorithms/iterative/PrecGeneralisedConjugateResidual.h>
|
||||||
|
#include <Grid/algorithms/iterative/PrecGeneralisedConjugateResidualNonHermitian.h>
|
||||||
|
#include <Grid/algorithms/iterative/BiCGSTAB.h>
|
||||||
|
|
||||||
|
using namespace std;
|
||||||
|
using namespace Grid;
|
||||||
|
|
||||||
|
///////////////////////
|
||||||
|
// Tells little dirac op to use MdagM as the .Op()
|
||||||
|
///////////////////////
|
||||||
|
template<class Field>
|
||||||
|
class HermOpAdaptor : public LinearOperatorBase<Field>
|
||||||
|
{
|
||||||
|
LinearOperatorBase<Field> & wrapped;
|
||||||
|
public:
|
||||||
|
HermOpAdaptor(LinearOperatorBase<Field> &wrapme) : wrapped(wrapme) {};
|
||||||
|
void OpDiag (const Field &in, Field &out) { assert(0); }
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp) { assert(0); }
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out){ assert(0); };
|
||||||
|
void Op (const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
void AdjOp (const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ assert(0); }
|
||||||
|
void HermOp(const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
int main (int argc, char ** argv)
|
||||||
|
{
|
||||||
|
Grid_init(&argc,&argv);
|
||||||
|
|
||||||
|
const int Ls=4;
|
||||||
|
|
||||||
|
GridCartesian * UGrid = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(),
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());
|
||||||
|
GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
|
||||||
|
|
||||||
|
GridCartesian * FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
|
||||||
|
GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
|
||||||
|
|
||||||
|
// Construct a coarsened grid
|
||||||
|
Coordinate clatt = GridDefaultLatt();
|
||||||
|
for(int d=0;d<clatt.size();d++){
|
||||||
|
clatt[d] = clatt[d]/2;
|
||||||
|
}
|
||||||
|
|
||||||
|
GridCartesian *Coarse4d = SpaceTimeGrid::makeFourDimGrid(clatt,
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());;
|
||||||
|
GridCartesian *Coarse5d = SpaceTimeGrid::makeFiveDimGrid(1,Coarse4d);
|
||||||
|
|
||||||
|
std::vector<int> seeds4({1,2,3,4});
|
||||||
|
std::vector<int> seeds5({5,6,7,8});
|
||||||
|
std::vector<int> cseeds({5,6,7,8});
|
||||||
|
GridParallelRNG RNG5(FGrid); RNG5.SeedFixedIntegers(seeds5);
|
||||||
|
GridParallelRNG RNG4(UGrid); RNG4.SeedFixedIntegers(seeds4);
|
||||||
|
GridParallelRNG CRNG(Coarse5d);CRNG.SeedFixedIntegers(cseeds);
|
||||||
|
|
||||||
|
LatticeFermion src(FGrid); random(RNG5,src);
|
||||||
|
LatticeFermion result(FGrid); result=Zero();
|
||||||
|
LatticeFermion ref(FGrid); ref=Zero();
|
||||||
|
LatticeFermion tmp(FGrid);
|
||||||
|
LatticeFermion err(FGrid);
|
||||||
|
LatticeGaugeField Umu(UGrid);
|
||||||
|
SU<Nc>::HotConfiguration(RNG4,Umu);
|
||||||
|
// Umu=Zero();
|
||||||
|
|
||||||
|
RealD mass=0.1;
|
||||||
|
RealD M5=1.8;
|
||||||
|
|
||||||
|
DomainWallFermionD Ddwf(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5);
|
||||||
|
|
||||||
|
const int nbasis = 16;
|
||||||
|
const int cb = 0 ;
|
||||||
|
LatticeFermion prom(FGrid);
|
||||||
|
|
||||||
|
std::vector<LatticeFermion> subspace(nbasis,FGrid);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Calling Aggregation class" <<std::endl;
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////////////
|
||||||
|
// Squared operator is in HermOp
|
||||||
|
///////////////////////////////////////////////////////////
|
||||||
|
MdagMLinearOperator<DomainWallFermionD,LatticeFermion> HermDefOp(Ddwf);
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
// Random aggregation space
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
std::cout<<GridLogMessage << "Building random aggregation class"<< std::endl;
|
||||||
|
typedef Aggregation<vSpinColourVector,vTComplex,nbasis> Subspace;
|
||||||
|
Subspace Aggregates(Coarse5d,FGrid,cb);
|
||||||
|
Aggregates.CreateSubspaceRandom(RNG5);
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
// Build little dirac op
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
std::cout<<GridLogMessage << "Building little Dirac operator"<< std::endl;
|
||||||
|
|
||||||
|
typedef GeneralCoarsenedMatrix<vSpinColourVector,vTComplex,nbasis> LittleDiracOperator;
|
||||||
|
typedef LittleDiracOperator::CoarseVector CoarseVector;
|
||||||
|
|
||||||
|
NextToNearestStencilGeometry5D geom(Coarse5d);
|
||||||
|
LittleDiracOperator LittleDiracOp(geom,FGrid,Coarse5d);
|
||||||
|
LittleDiracOperator LittleDiracOpCol(geom,FGrid,Coarse5d);
|
||||||
|
|
||||||
|
HermOpAdaptor<LatticeFermionD> HOA(HermDefOp);
|
||||||
|
|
||||||
|
int pp=16;
|
||||||
|
LittleDiracOp.CoarsenOperator(HOA,Aggregates);
|
||||||
|
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
// Test the operator
|
||||||
|
///////////////////////////////////////////////////
|
||||||
|
CoarseVector c_src (Coarse5d);
|
||||||
|
CoarseVector c_res (Coarse5d);
|
||||||
|
CoarseVector c_res_dag(Coarse5d);
|
||||||
|
CoarseVector c_proj(Coarse5d);
|
||||||
|
|
||||||
|
subspace=Aggregates.subspace;
|
||||||
|
|
||||||
|
// random(CRNG,c_src);
|
||||||
|
c_src = 1.0;
|
||||||
|
|
||||||
|
blockPromote(c_src,err,subspace);
|
||||||
|
|
||||||
|
prom=Zero();
|
||||||
|
for(int b=0;b<nbasis;b++){
|
||||||
|
prom=prom+subspace[b];
|
||||||
|
}
|
||||||
|
err=err-prom;
|
||||||
|
std::cout<<GridLogMessage<<"Promoted back from subspace: err "<<norm2(err)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"c_src "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"prom "<<norm2(prom)<<std::endl;
|
||||||
|
|
||||||
|
HermDefOp.HermOp(prom,tmp);
|
||||||
|
|
||||||
|
blockProject(c_proj,tmp,subspace);
|
||||||
|
std::cout<<GridLogMessage<<" Called Big Dirac Op "<<norm2(tmp)<<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<" Calling little Dirac Op "<<std::endl;
|
||||||
|
LittleDiracOp.M(c_src,c_res);
|
||||||
|
LittleDiracOp.Mdag(c_src,c_res_dag);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Little dop : "<<norm2(c_res)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"Little dop dag : "<<norm2(c_res_dag)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"Big dop in subspace : "<<norm2(c_proj)<<std::endl;
|
||||||
|
|
||||||
|
c_proj = c_proj - c_res;
|
||||||
|
std::cout<<GridLogMessage<<" ldop error: "<<norm2(c_proj)<<std::endl;
|
||||||
|
|
||||||
|
c_res_dag = c_res_dag - c_res;
|
||||||
|
std::cout<<GridLogMessage<<"Little dopDag - dop: "<<norm2(c_res_dag)<<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage << "Testing Hermiticity stochastically "<< std::endl;
|
||||||
|
CoarseVector phi(Coarse5d);
|
||||||
|
CoarseVector chi(Coarse5d);
|
||||||
|
CoarseVector Aphi(Coarse5d);
|
||||||
|
CoarseVector Achi(Coarse5d);
|
||||||
|
|
||||||
|
random(CRNG,phi);
|
||||||
|
random(CRNG,chi);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Made randoms "<<norm2(phi)<<" " << norm2(chi)<<std::endl;
|
||||||
|
|
||||||
|
LittleDiracOp.M(phi,Aphi);
|
||||||
|
|
||||||
|
LittleDiracOp.Mdag(chi,Achi);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Aphi "<<norm2(Aphi)<<" A chi" << norm2(Achi)<<std::endl;
|
||||||
|
|
||||||
|
ComplexD pAc = innerProduct(chi,Aphi);
|
||||||
|
ComplexD cAp = innerProduct(phi,Achi);
|
||||||
|
ComplexD cAc = innerProduct(chi,Achi);
|
||||||
|
ComplexD pAp = innerProduct(phi,Aphi);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<< "pAc "<<pAc<<" cAp "<< cAp<< " diff "<<pAc-adj(cAp)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<< "pAp "<<pAp<<" cAc "<< cAc<<"Should be real"<< std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Testing linearity"<<std::endl;
|
||||||
|
CoarseVector PhiPlusChi(Coarse5d);
|
||||||
|
CoarseVector APhiPlusChi(Coarse5d);
|
||||||
|
CoarseVector linerr(Coarse5d);
|
||||||
|
PhiPlusChi = phi+chi;
|
||||||
|
LittleDiracOp.M(PhiPlusChi,APhiPlusChi);
|
||||||
|
|
||||||
|
linerr= APhiPlusChi-Aphi;
|
||||||
|
linerr= linerr-Achi;
|
||||||
|
std::cout<<GridLogMessage<<"**Diff "<<norm2(linerr)<<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
|
||||||
|
Grid_finalize();
|
||||||
|
return 0;
|
||||||
|
}
|
426
tests/debug/Test_general_coarse_hdcg.cc
Normal file
426
tests/debug/Test_general_coarse_hdcg.cc
Normal file
@ -0,0 +1,426 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./tests/Test_general_coarse_hdcg.cc
|
||||||
|
|
||||||
|
Copyright (C) 2023
|
||||||
|
|
||||||
|
Author: Peter Boyle <pboyle@bnl.gov>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#include <Grid/Grid.h>
|
||||||
|
#include <Grid/lattice/PaddedCell.h>
|
||||||
|
#include <Grid/stencil/GeneralLocalStencil.h>
|
||||||
|
//#include <Grid/algorithms/GeneralCoarsenedMatrix.h>
|
||||||
|
#include <Grid/algorithms/iterative/AdefGeneric.h>
|
||||||
|
|
||||||
|
using namespace std;
|
||||||
|
using namespace Grid;
|
||||||
|
|
||||||
|
template<class Coarsened>
|
||||||
|
void SaveOperator(Coarsened &Operator,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacWriter WR(Operator.Grid()->IsBoss());
|
||||||
|
assert(Operator._A.size()==Operator.geom.npoint);
|
||||||
|
WR.open(file);
|
||||||
|
for(int p=0;p<Operator._A.size();p++){
|
||||||
|
auto tmp = Operator.Cell.Extract(Operator._A[p]);
|
||||||
|
WR.writeScidacFieldRecord(tmp,record);
|
||||||
|
}
|
||||||
|
WR.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class Coarsened>
|
||||||
|
void LoadOperator(Coarsened &Operator,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
Grid::ScidacReader RD ;
|
||||||
|
RD.open(file);
|
||||||
|
assert(Operator._A.size()==Operator.geom.npoint);
|
||||||
|
for(int p=0;p<Operator.geom.npoint;p++){
|
||||||
|
conformable(Operator._A[p].Grid(),Operator.CoarseGrid());
|
||||||
|
RD.readScidacFieldRecord(Operator._A[p],record);
|
||||||
|
}
|
||||||
|
RD.close();
|
||||||
|
Operator.ExchangeCoarseLinks();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class aggregation>
|
||||||
|
void SaveBasis(aggregation &Agg,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacWriter WR(Agg.FineGrid->IsBoss());
|
||||||
|
WR.open(file);
|
||||||
|
for(int b=0;b<Agg.subspace.size();b++){
|
||||||
|
WR.writeScidacFieldRecord(Agg.subspace[b],record);
|
||||||
|
}
|
||||||
|
WR.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class aggregation>
|
||||||
|
void LoadBasis(aggregation &Agg, std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacReader RD ;
|
||||||
|
RD.open(file);
|
||||||
|
for(int b=0;b<Agg.subspace.size();b++){
|
||||||
|
RD.readScidacFieldRecord(Agg.subspace[b],record);
|
||||||
|
}
|
||||||
|
RD.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
template<class Field> class TestSolver : public LinearFunction<Field> {
|
||||||
|
public:
|
||||||
|
TestSolver() {};
|
||||||
|
void operator() (const Field &in, Field &out){ out = Zero(); }
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
RealD InverseApproximation(RealD x){
|
||||||
|
return 1.0/x;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Want Op in CoarsenOp to call MatPcDagMatPc
|
||||||
|
template<class Field>
|
||||||
|
class HermOpAdaptor : public LinearOperatorBase<Field>
|
||||||
|
{
|
||||||
|
LinearOperatorBase<Field> & wrapped;
|
||||||
|
public:
|
||||||
|
HermOpAdaptor(LinearOperatorBase<Field> &wrapme) : wrapped(wrapme) {};
|
||||||
|
void Op (const Field &in, Field &out) { wrapped.HermOp(in,out); }
|
||||||
|
void HermOp(const Field &in, Field &out) { wrapped.HermOp(in,out); }
|
||||||
|
void AdjOp (const Field &in, Field &out){ wrapped.HermOp(in,out); }
|
||||||
|
void OpDiag (const Field &in, Field &out) { assert(0); }
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp) { assert(0); }
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out) { assert(0); };
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ assert(0); }
|
||||||
|
};
|
||||||
|
template<class Field,class Matrix> class ChebyshevSmoother : public LinearFunction<Field>
|
||||||
|
{
|
||||||
|
public:
|
||||||
|
using LinearFunction<Field>::operator();
|
||||||
|
typedef LinearOperatorBase<Field> FineOperator;
|
||||||
|
FineOperator & _SmootherOperator;
|
||||||
|
Chebyshev<Field> Cheby;
|
||||||
|
ChebyshevSmoother(RealD _lo,RealD _hi,int _ord, FineOperator &SmootherOperator) :
|
||||||
|
_SmootherOperator(SmootherOperator),
|
||||||
|
Cheby(_lo,_hi,_ord,InverseApproximation)
|
||||||
|
{
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev smoother order "<<_ord<<" ["<<_lo<<","<<_hi<<"]"<<std::endl;
|
||||||
|
};
|
||||||
|
void operator() (const Field &in, Field &out)
|
||||||
|
{
|
||||||
|
Field tmp(in.Grid());
|
||||||
|
tmp = in;
|
||||||
|
Cheby(_SmootherOperator,tmp,out);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
int main (int argc, char ** argv)
|
||||||
|
{
|
||||||
|
Grid_init(&argc,&argv);
|
||||||
|
|
||||||
|
const int Ls=24;
|
||||||
|
const int nbasis = 40;
|
||||||
|
const int cb = 0 ;
|
||||||
|
RealD mass=0.00078;
|
||||||
|
RealD M5=1.8;
|
||||||
|
RealD b=1.5;
|
||||||
|
RealD c=0.5;
|
||||||
|
|
||||||
|
GridCartesian * UGrid = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(),
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());
|
||||||
|
GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
|
||||||
|
GridCartesian * FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
|
||||||
|
GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
|
||||||
|
|
||||||
|
// Construct a coarsened grid with 4^4 cell
|
||||||
|
Coordinate clatt = GridDefaultLatt();
|
||||||
|
for(int d=0;d<clatt.size();d++){
|
||||||
|
clatt[d] = clatt[d]/4;
|
||||||
|
}
|
||||||
|
GridCartesian *Coarse4d = SpaceTimeGrid::makeFourDimGrid(clatt,
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());;
|
||||||
|
GridCartesian *Coarse5d = SpaceTimeGrid::makeFiveDimGrid(1,Coarse4d);
|
||||||
|
|
||||||
|
///////////////////////// RNGs /////////////////////////////////
|
||||||
|
std::vector<int> seeds4({1,2,3,4});
|
||||||
|
std::vector<int> seeds5({5,6,7,8});
|
||||||
|
std::vector<int> cseeds({5,6,7,8});
|
||||||
|
|
||||||
|
GridParallelRNG RNG5(FGrid); RNG5.SeedFixedIntegers(seeds5);
|
||||||
|
GridParallelRNG RNG4(UGrid); RNG4.SeedFixedIntegers(seeds4);
|
||||||
|
GridParallelRNG CRNG(Coarse5d);CRNG.SeedFixedIntegers(cseeds);
|
||||||
|
|
||||||
|
///////////////////////// Configuration /////////////////////////////////
|
||||||
|
LatticeGaugeField Umu(UGrid);
|
||||||
|
|
||||||
|
FieldMetaData header;
|
||||||
|
std::string file("ckpoint_lat.4000");
|
||||||
|
NerscIO::readConfiguration(Umu,header,file);
|
||||||
|
|
||||||
|
//////////////////////// Fermion action //////////////////////////////////
|
||||||
|
MobiusFermionD Ddwf(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5,b,c);
|
||||||
|
|
||||||
|
SchurDiagMooeeOperator<MobiusFermionD, LatticeFermion> HermOpEO(Ddwf);
|
||||||
|
|
||||||
|
typedef HermOpAdaptor<LatticeFermionD> HermFineMatrix;
|
||||||
|
HermFineMatrix FineHermOp(HermOpEO);
|
||||||
|
|
||||||
|
LatticeFermion result(FrbGrid); result=Zero();
|
||||||
|
|
||||||
|
LatticeFermion src(FrbGrid); random(RNG5,src);
|
||||||
|
|
||||||
|
// Run power method on FineHermOp
|
||||||
|
PowerMethod<LatticeFermion> PM; PM(HermOpEO,src);
|
||||||
|
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
///////////// Coarse basis and Little Dirac Operator ///////
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
typedef GeneralCoarsenedMatrix<vSpinColourVector,vTComplex,nbasis> LittleDiracOperator;
|
||||||
|
typedef LittleDiracOperator::CoarseVector CoarseVector;
|
||||||
|
|
||||||
|
NextToNextToNextToNearestStencilGeometry5D geom(Coarse5d);
|
||||||
|
NearestStencilGeometry5D geom_nn(Coarse5d);
|
||||||
|
|
||||||
|
// Warning: This routine calls PVdagM.Op, not PVdagM.HermOp
|
||||||
|
typedef Aggregation<vSpinColourVector,vTComplex,nbasis> Subspace;
|
||||||
|
Subspace Aggregates(Coarse5d,FrbGrid,cb);
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
// Need to check about red-black grid coarsening
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
LittleDiracOperator LittleDiracOp(geom,FrbGrid,Coarse5d);
|
||||||
|
|
||||||
|
bool load=false;
|
||||||
|
if ( load ) {
|
||||||
|
LoadBasis(Aggregates,"/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/Subspace.scidac");
|
||||||
|
LoadOperator(LittleDiracOp,"/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/LittleDiracOp.scidac");
|
||||||
|
} else {
|
||||||
|
Aggregates.CreateSubspaceChebyshev(RNG5,HermOpEO,nbasis,
|
||||||
|
95.0,0.1,
|
||||||
|
// 400,200,200 -- 48 iters
|
||||||
|
// 600,200,200 -- 38 iters, 162s
|
||||||
|
// 600,200,100 -- 38 iters, 169s
|
||||||
|
// 600,200,50 -- 88 iters. 370s
|
||||||
|
800,
|
||||||
|
200,
|
||||||
|
100,
|
||||||
|
0.0);
|
||||||
|
LittleDiracOp.CoarsenOperator(FineHermOp,Aggregates);
|
||||||
|
SaveBasis(Aggregates,"/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/Subspace.scidac");
|
||||||
|
SaveOperator(LittleDiracOp,"/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/LittleDiracOp.scidac");
|
||||||
|
}
|
||||||
|
|
||||||
|
// Try projecting to one hop only
|
||||||
|
LittleDiracOperator LittleDiracOpProj(geom_nn,FrbGrid,Coarse5d);
|
||||||
|
LittleDiracOpProj.ProjectNearestNeighbour(0.01,LittleDiracOp); // smaller shift 0.02? n
|
||||||
|
|
||||||
|
typedef HermitianLinearOperator<LittleDiracOperator,CoarseVector> HermMatrix;
|
||||||
|
HermMatrix CoarseOp (LittleDiracOp);
|
||||||
|
HermMatrix CoarseOpProj (LittleDiracOpProj);
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a coarse lanczos
|
||||||
|
//////////////////////////////////////////
|
||||||
|
Chebyshev<CoarseVector> IRLCheby(0.2,40.0,71); // 1 iter
|
||||||
|
FunctionHermOp<CoarseVector> IRLOpCheby(IRLCheby,CoarseOp);
|
||||||
|
PlainHermOp<CoarseVector> IRLOp (CoarseOp);
|
||||||
|
int Nk=48;
|
||||||
|
int Nm=64;
|
||||||
|
int Nstop=Nk;
|
||||||
|
ImplicitlyRestartedLanczos<CoarseVector> IRL(IRLOpCheby,IRLOp,Nstop,Nk,Nm,1.0e-5,20);
|
||||||
|
|
||||||
|
int Nconv;
|
||||||
|
std::vector<RealD> eval(Nm);
|
||||||
|
std::vector<CoarseVector> evec(Nm,Coarse5d);
|
||||||
|
CoarseVector c_src(Coarse5d);
|
||||||
|
//c_src=1.0;
|
||||||
|
random(CRNG,c_src);
|
||||||
|
|
||||||
|
CoarseVector c_res(Coarse5d);
|
||||||
|
CoarseVector c_ref(Coarse5d);
|
||||||
|
|
||||||
|
PowerMethod<CoarseVector> cPM; cPM(CoarseOp,c_src);
|
||||||
|
|
||||||
|
IRL.calc(eval,evec,c_src,Nconv);
|
||||||
|
DeflatedGuesser<CoarseVector> DeflCoarseGuesser(evec,eval);
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a coarse space solver
|
||||||
|
//////////////////////////////////////////
|
||||||
|
int maxit=20000;
|
||||||
|
ConjugateGradient<CoarseVector> CG(1.0e-8,maxit,false);
|
||||||
|
ConjugateGradient<LatticeFermionD> CGfine(1.0e-8,10000,false);
|
||||||
|
ZeroGuesser<CoarseVector> CoarseZeroGuesser;
|
||||||
|
|
||||||
|
// HPDSolver<CoarseVector> HPDSolve(CoarseOp,CG,CoarseZeroGuesser);
|
||||||
|
HPDSolver<CoarseVector> HPDSolve(CoarseOp,CG,DeflCoarseGuesser);
|
||||||
|
c_res=Zero();
|
||||||
|
HPDSolve(c_src,c_res); c_ref = c_res;
|
||||||
|
std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"ref norm "<<norm2(c_ref)<<std::endl;
|
||||||
|
//////////////////////////////////////////////////////////////////////////
|
||||||
|
// Deflated (with real op EV's) solve for the projected coarse op
|
||||||
|
// Work towards ADEF1 in the coarse space
|
||||||
|
//////////////////////////////////////////////////////////////////////////
|
||||||
|
HPDSolver<CoarseVector> HPDSolveProj(CoarseOpProj,CG,DeflCoarseGuesser);
|
||||||
|
c_res=Zero();
|
||||||
|
HPDSolveProj(c_src,c_res);
|
||||||
|
std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
c_res = c_res - c_ref;
|
||||||
|
std::cout << "Projected solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
//////////////////////////////////////////////////////////////////////
|
||||||
|
// Coarse ADEF1 with deflation space
|
||||||
|
//////////////////////////////////////////////////////////////////////
|
||||||
|
ChebyshevSmoother<CoarseVector,HermMatrix >
|
||||||
|
CoarseSmoother(1.0,37.,8,CoarseOpProj); // just go to sloppy 0.1 convergence
|
||||||
|
// CoarseSmoother(0.1,37.,8,CoarseOpProj); //
|
||||||
|
// CoarseSmoother(0.5,37.,6,CoarseOpProj); // 8 iter 0.36s
|
||||||
|
// CoarseSmoother(0.5,37.,12,CoarseOpProj); // 8 iter, 0.55s
|
||||||
|
// CoarseSmoother(0.5,37.,8,CoarseOpProj);// 7-9 iter
|
||||||
|
// CoarseSmoother(1.0,37.,8,CoarseOpProj); // 0.4 - 0.5s solve to 0.04, 7-9 iter
|
||||||
|
// ChebyshevSmoother<CoarseVector,HermMatrix > CoarseSmoother(0.5,36.,10,CoarseOpProj); // 311
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// CG, Cheby mode spacing 200,200
|
||||||
|
// Unprojected Coarse CG solve to 1e-8 : 190 iters, 4.9s
|
||||||
|
// Unprojected Coarse CG solve to 4e-2 : 33 iters, 0.8s
|
||||||
|
// Projected Coarse CG solve to 1e-8 : 100 iters, 0.36s
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// CoarseSmoother(1.0,48.,8,CoarseOpProj); 48 evecs
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// ADEF1 Coarse solve to 1e-8 : 44 iters, 2.34s 2.1x gain
|
||||||
|
// ADEF1 Coarse solve to 4e-2 : 7 iters, 0.4s
|
||||||
|
// HDCG 38 iters 162s
|
||||||
|
//
|
||||||
|
// CoarseSmoother(1.0,40.,8,CoarseOpProj); 48 evecs
|
||||||
|
// ADEF1 Coarse solve to 1e-8 : 37 iters, 2.0s 2.1x gain
|
||||||
|
// ADEF1 Coarse solve to 4e-2 : 6 iters, 0.36s
|
||||||
|
// HDCG 38 iters 169s
|
||||||
|
|
||||||
|
TwoLevelADEF1defl<CoarseVector>
|
||||||
|
cADEF1(1.0e-8, 500,
|
||||||
|
CoarseOp,
|
||||||
|
CoarseSmoother,
|
||||||
|
evec,eval);
|
||||||
|
|
||||||
|
c_res=Zero();
|
||||||
|
cADEF1(c_src,c_res);
|
||||||
|
std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"cADEF1 res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
c_res = c_res - c_ref;
|
||||||
|
std::cout << "cADEF1 solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
// cADEF1.Tolerance = 4.0e-2;
|
||||||
|
// cADEF1.Tolerance = 1.0e-1;
|
||||||
|
cADEF1.Tolerance = 5.0e-2;
|
||||||
|
c_res=Zero();
|
||||||
|
cADEF1(c_src,c_res);
|
||||||
|
std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout << GridLogMessage<<"cADEF1 res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
c_res = c_res - c_ref;
|
||||||
|
std::cout << "cADEF1 solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a smoother
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(10.0,100.0,10,FineHermOp); //499
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(3.0,100.0,10,FineHermOp); //383
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(1.0,100.0,10,FineHermOp); //328
|
||||||
|
// std::vector<RealD> los({0.5,1.0,3.0}); // 147/142/146 nbasis 1
|
||||||
|
// std::vector<RealD> los({1.0,2.0}); // Nbasis 24: 88,86 iterations
|
||||||
|
// std::vector<RealD> los({2.0,4.0}); // Nbasis 32 == 52, iters
|
||||||
|
// std::vector<RealD> los({2.0,4.0}); // Nbasis 40 == 36,36 iters
|
||||||
|
|
||||||
|
//
|
||||||
|
// Turns approx 2700 iterations into 340 fine multiplies with Nbasis 40
|
||||||
|
// Need to measure cost of coarse space.
|
||||||
|
//
|
||||||
|
// -- i) Reduce coarse residual -- 0.04
|
||||||
|
// -- ii) Lanczos on coarse space -- done
|
||||||
|
// -- iii) Possible 1 hop project and/or preconditioning it - easy - PrecCG it and
|
||||||
|
// use a limited stencil. Reread BFM code to check on evecs / deflation strategy with prec
|
||||||
|
//
|
||||||
|
std::vector<RealD> los({3.0}); // Nbasis 40 == 36,36 iters
|
||||||
|
|
||||||
|
// std::vector<int> ords({7,8,10}); // Nbasis 40 == 40,38,36 iters (320,342,396 mults)
|
||||||
|
std::vector<int> ords({7}); // Nbasis 40 == 40 iters (320 mults)
|
||||||
|
|
||||||
|
for(int l=0;l<los.size();l++){
|
||||||
|
|
||||||
|
RealD lo = los[l];
|
||||||
|
|
||||||
|
for(int o=0;o<ords.size();o++){
|
||||||
|
|
||||||
|
ConjugateGradient<CoarseVector> CGsloppy(4.0e-2,maxit,false);
|
||||||
|
HPDSolver<CoarseVector> HPDSolveSloppy(CoarseOp,CGsloppy,DeflCoarseGuesser);
|
||||||
|
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(lo,92,10,FineHermOp); // 36 best case
|
||||||
|
ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(lo,92,ords[o],FineHermOp); // 311
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a HDCG solver
|
||||||
|
//////////////////////////////////////////
|
||||||
|
TwoLevelADEF2<LatticeFermion,CoarseVector,Subspace>
|
||||||
|
HDCG(1.0e-8, 100,
|
||||||
|
FineHermOp,
|
||||||
|
Smoother,
|
||||||
|
HPDSolveSloppy,
|
||||||
|
HPDSolve,
|
||||||
|
Aggregates);
|
||||||
|
|
||||||
|
TwoLevelADEF2<LatticeFermion,CoarseVector,Subspace>
|
||||||
|
HDCGdefl(1.0e-8, 100,
|
||||||
|
FineHermOp,
|
||||||
|
Smoother,
|
||||||
|
cADEF1,
|
||||||
|
HPDSolve,
|
||||||
|
Aggregates);
|
||||||
|
|
||||||
|
result=Zero();
|
||||||
|
HDCGdefl(src,result);
|
||||||
|
|
||||||
|
result=Zero();
|
||||||
|
HDCG(src,result);
|
||||||
|
|
||||||
|
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Standard CG
|
||||||
|
result=Zero();
|
||||||
|
CGfine(HermOpEO, src, result);
|
||||||
|
|
||||||
|
Grid_finalize();
|
||||||
|
return 0;
|
||||||
|
}
|
429
tests/debug/Test_general_coarse_hdcg_phys.cc
Normal file
429
tests/debug/Test_general_coarse_hdcg_phys.cc
Normal file
@ -0,0 +1,429 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./tests/Test_general_coarse_hdcg.cc
|
||||||
|
|
||||||
|
Copyright (C) 2023
|
||||||
|
|
||||||
|
Author: Peter Boyle <pboyle@bnl.gov>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#include <Grid/Grid.h>
|
||||||
|
#include <Grid/lattice/PaddedCell.h>
|
||||||
|
#include <Grid/stencil/GeneralLocalStencil.h>
|
||||||
|
//#include <Grid/algorithms/GeneralCoarsenedMatrix.h>
|
||||||
|
#include <Grid/algorithms/iterative/AdefGeneric.h>
|
||||||
|
|
||||||
|
using namespace std;
|
||||||
|
using namespace Grid;
|
||||||
|
|
||||||
|
template<class Coarsened>
|
||||||
|
void SaveOperator(Coarsened &Operator,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacWriter WR(Operator.Grid()->IsBoss());
|
||||||
|
assert(Operator._A.size()==Operator.geom.npoint);
|
||||||
|
WR.open(file);
|
||||||
|
for(int p=0;p<Operator._A.size();p++){
|
||||||
|
auto tmp = Operator.Cell.Extract(Operator._A[p]);
|
||||||
|
WR.writeScidacFieldRecord(tmp,record,0,0);
|
||||||
|
// WR.writeScidacFieldRecord(tmp,record,0,BINARYIO_LEXICOGRAPHIC);
|
||||||
|
}
|
||||||
|
WR.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class Coarsened>
|
||||||
|
void LoadOperator(Coarsened &Operator,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
Grid::ScidacReader RD ;
|
||||||
|
RD.open(file);
|
||||||
|
assert(Operator._A.size()==Operator.geom.npoint);
|
||||||
|
for(int p=0;p<Operator.geom.npoint;p++){
|
||||||
|
conformable(Operator._A[p].Grid(),Operator.CoarseGrid());
|
||||||
|
// RD.readScidacFieldRecord(Operator._A[p],record,BINARYIO_LEXICOGRAPHIC);
|
||||||
|
RD.readScidacFieldRecord(Operator._A[p],record,0);
|
||||||
|
}
|
||||||
|
RD.close();
|
||||||
|
Operator.ExchangeCoarseLinks();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class aggregation>
|
||||||
|
void SaveBasis(aggregation &Agg,std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacWriter WR(Agg.FineGrid->IsBoss());
|
||||||
|
WR.open(file);
|
||||||
|
for(int b=0;b<Agg.subspace.size();b++){
|
||||||
|
//WR.writeScidacFieldRecord(Agg.subspace[b],record,0,BINARYIO_LEXICOGRAPHIC);
|
||||||
|
WR.writeScidacFieldRecord(Agg.subspace[b],record,0,0);
|
||||||
|
}
|
||||||
|
WR.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
template<class aggregation>
|
||||||
|
void LoadBasis(aggregation &Agg, std::string file)
|
||||||
|
{
|
||||||
|
#ifdef HAVE_LIME
|
||||||
|
emptyUserRecord record;
|
||||||
|
ScidacReader RD ;
|
||||||
|
RD.open(file);
|
||||||
|
for(int b=0;b<Agg.subspace.size();b++){
|
||||||
|
// RD.readScidacFieldRecord(Agg.subspace[b],record,BINARYIO_LEXICOGRAPHIC);
|
||||||
|
RD.readScidacFieldRecord(Agg.subspace[b],record,0);
|
||||||
|
}
|
||||||
|
RD.close();
|
||||||
|
#endif
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
template<class Field> class TestSolver : public LinearFunction<Field> {
|
||||||
|
public:
|
||||||
|
TestSolver() {};
|
||||||
|
void operator() (const Field &in, Field &out){ out = Zero(); }
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
RealD InverseApproximation(RealD x){
|
||||||
|
return 1.0/x;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Want Op in CoarsenOp to call MatPcDagMatPc
|
||||||
|
template<class Field>
|
||||||
|
class HermOpAdaptor : public LinearOperatorBase<Field>
|
||||||
|
{
|
||||||
|
LinearOperatorBase<Field> & wrapped;
|
||||||
|
public:
|
||||||
|
HermOpAdaptor(LinearOperatorBase<Field> &wrapme) : wrapped(wrapme) {};
|
||||||
|
void Op (const Field &in, Field &out) { wrapped.HermOp(in,out); }
|
||||||
|
void HermOp(const Field &in, Field &out) { wrapped.HermOp(in,out); }
|
||||||
|
void AdjOp (const Field &in, Field &out){ wrapped.HermOp(in,out); }
|
||||||
|
void OpDiag (const Field &in, Field &out) { assert(0); }
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp) { assert(0); }
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out) { assert(0); };
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ assert(0); }
|
||||||
|
};
|
||||||
|
template<class Field,class Matrix> class ChebyshevSmoother : public LinearFunction<Field>
|
||||||
|
{
|
||||||
|
public:
|
||||||
|
using LinearFunction<Field>::operator();
|
||||||
|
typedef LinearOperatorBase<Field> FineOperator;
|
||||||
|
FineOperator & _SmootherOperator;
|
||||||
|
Chebyshev<Field> Cheby;
|
||||||
|
ChebyshevSmoother(RealD _lo,RealD _hi,int _ord, FineOperator &SmootherOperator) :
|
||||||
|
_SmootherOperator(SmootherOperator),
|
||||||
|
Cheby(_lo,_hi,_ord,InverseApproximation)
|
||||||
|
{
|
||||||
|
std::cout << GridLogMessage<<" Chebyshev smoother order "<<_ord<<" ["<<_lo<<","<<_hi<<"]"<<std::endl;
|
||||||
|
};
|
||||||
|
void operator() (const Field &in, Field &out)
|
||||||
|
{
|
||||||
|
Field tmp(in.Grid());
|
||||||
|
tmp = in;
|
||||||
|
Cheby(_SmootherOperator,tmp,out);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
int main (int argc, char ** argv)
|
||||||
|
{
|
||||||
|
Grid_init(&argc,&argv);
|
||||||
|
|
||||||
|
const int Ls=24;
|
||||||
|
const int nbasis = 40;
|
||||||
|
const int cb = 0 ;
|
||||||
|
RealD mass=0.00078;
|
||||||
|
RealD M5=1.8;
|
||||||
|
RealD b=1.5;
|
||||||
|
RealD c=0.5;
|
||||||
|
|
||||||
|
GridCartesian * UGrid = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(),
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());
|
||||||
|
GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
|
||||||
|
GridCartesian * FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
|
||||||
|
GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
|
||||||
|
|
||||||
|
// Construct a coarsened grid with 4^4 cell
|
||||||
|
Coordinate clatt = GridDefaultLatt();
|
||||||
|
for(int d=0;d<clatt.size();d++){
|
||||||
|
clatt[d] = clatt[d]/4;
|
||||||
|
}
|
||||||
|
GridCartesian *Coarse4d = SpaceTimeGrid::makeFourDimGrid(clatt,
|
||||||
|
GridDefaultSimd(Nd,vComplex::Nsimd()),
|
||||||
|
GridDefaultMpi());;
|
||||||
|
GridCartesian *Coarse5d = SpaceTimeGrid::makeFiveDimGrid(1,Coarse4d);
|
||||||
|
|
||||||
|
///////////////////////// RNGs /////////////////////////////////
|
||||||
|
std::vector<int> seeds4({1,2,3,4});
|
||||||
|
std::vector<int> seeds5({5,6,7,8});
|
||||||
|
std::vector<int> cseeds({5,6,7,8});
|
||||||
|
|
||||||
|
GridParallelRNG RNG5(FGrid); RNG5.SeedFixedIntegers(seeds5);
|
||||||
|
GridParallelRNG RNG4(UGrid); RNG4.SeedFixedIntegers(seeds4);
|
||||||
|
GridParallelRNG CRNG(Coarse5d);CRNG.SeedFixedIntegers(cseeds);
|
||||||
|
|
||||||
|
///////////////////////// Configuration /////////////////////////////////
|
||||||
|
LatticeGaugeField Umu(UGrid);
|
||||||
|
|
||||||
|
FieldMetaData header;
|
||||||
|
std::string file("ckpoint_lat.2250");
|
||||||
|
NerscIO::readConfiguration(Umu,header,file);
|
||||||
|
|
||||||
|
//////////////////////// Fermion action //////////////////////////////////
|
||||||
|
MobiusFermionD Ddwf(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5,b,c);
|
||||||
|
|
||||||
|
SchurDiagMooeeOperator<MobiusFermionD, LatticeFermion> HermOpEO(Ddwf);
|
||||||
|
|
||||||
|
typedef HermOpAdaptor<LatticeFermionD> HermFineMatrix;
|
||||||
|
HermFineMatrix FineHermOp(HermOpEO);
|
||||||
|
|
||||||
|
LatticeFermion result(FrbGrid); result=Zero();
|
||||||
|
|
||||||
|
LatticeFermion src(FrbGrid); random(RNG5,src);
|
||||||
|
|
||||||
|
// Run power method on FineHermOp
|
||||||
|
PowerMethod<LatticeFermion> PM; PM(HermOpEO,src);
|
||||||
|
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
///////////// Coarse basis and Little Dirac Operator ///////
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
typedef GeneralCoarsenedMatrix<vSpinColourVector,vTComplex,nbasis> LittleDiracOperator;
|
||||||
|
typedef LittleDiracOperator::CoarseVector CoarseVector;
|
||||||
|
|
||||||
|
NextToNextToNextToNearestStencilGeometry5D geom(Coarse5d);
|
||||||
|
NearestStencilGeometry5D geom_nn(Coarse5d);
|
||||||
|
|
||||||
|
// Warning: This routine calls PVdagM.Op, not PVdagM.HermOp
|
||||||
|
typedef Aggregation<vSpinColourVector,vTComplex,nbasis> Subspace;
|
||||||
|
Subspace Aggregates(Coarse5d,FrbGrid,cb);
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
// Need to check about red-black grid coarsening
|
||||||
|
////////////////////////////////////////////////////////////
|
||||||
|
LittleDiracOperator LittleDiracOp(geom,FrbGrid,Coarse5d);
|
||||||
|
|
||||||
|
std::string subspace_file("/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/Subspace.phys.nolex.scidac");
|
||||||
|
std::string ldop_file("/lustre/orion/phy157/proj-shared/phy157_dwf/paboyle/LittleDiracOp.phys.nolex.scidac");
|
||||||
|
bool load_agg=true;
|
||||||
|
bool load_mat=true;
|
||||||
|
if ( load_agg ) {
|
||||||
|
LoadBasis(Aggregates,subspace_file);
|
||||||
|
} else {
|
||||||
|
Aggregates.CreateSubspaceChebyshev(RNG5,HermOpEO,nbasis,
|
||||||
|
95.0,0.05,
|
||||||
|
1000,
|
||||||
|
200,
|
||||||
|
200,
|
||||||
|
0.0);
|
||||||
|
SaveBasis(Aggregates,subspace_file);
|
||||||
|
}
|
||||||
|
if ( load_mat ) {
|
||||||
|
LoadOperator(LittleDiracOp,ldop_file);
|
||||||
|
} else {
|
||||||
|
LittleDiracOp.CoarsenOperator(FineHermOp,Aggregates);
|
||||||
|
SaveOperator(LittleDiracOp,ldop_file);
|
||||||
|
}
|
||||||
|
|
||||||
|
// Try projecting to one hop only
|
||||||
|
LittleDiracOperator LittleDiracOpProj(geom_nn,FrbGrid,Coarse5d);
|
||||||
|
LittleDiracOpProj.ProjectNearestNeighbour(0.01,LittleDiracOp); // smaller shift 0.02? n
|
||||||
|
|
||||||
|
typedef HermitianLinearOperator<LittleDiracOperator,CoarseVector> HermMatrix;
|
||||||
|
HermMatrix CoarseOp (LittleDiracOp);
|
||||||
|
HermMatrix CoarseOpProj (LittleDiracOpProj);
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a coarse lanczos
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Chebyshev<CoarseVector> IRLCheby(0.01,44.0,201); // 1 iter
|
||||||
|
Chebyshev<CoarseVector> IRLCheby(0.005,44.0,401); // 1 iter
|
||||||
|
FunctionHermOp<CoarseVector> IRLOpCheby(IRLCheby,CoarseOp);
|
||||||
|
PlainHermOp<CoarseVector> IRLOp (CoarseOp);
|
||||||
|
int Nk=160;
|
||||||
|
int Nm=240;
|
||||||
|
int Nstop=Nk;
|
||||||
|
ImplicitlyRestartedLanczos<CoarseVector> IRL(IRLOpCheby,IRLOp,Nstop,Nk,Nm,1.0e-3,20);
|
||||||
|
|
||||||
|
int Nconv;
|
||||||
|
std::vector<RealD> eval(Nm);
|
||||||
|
std::vector<CoarseVector> evec(Nm,Coarse5d);
|
||||||
|
CoarseVector c_src(Coarse5d); c_src=1.0;
|
||||||
|
CoarseVector c_res(Coarse5d);
|
||||||
|
CoarseVector c_ref(Coarse5d);
|
||||||
|
|
||||||
|
PowerMethod<CoarseVector> cPM; cPM(CoarseOp,c_src);
|
||||||
|
|
||||||
|
IRL.calc(eval,evec,c_src,Nconv);
|
||||||
|
DeflatedGuesser<CoarseVector> DeflCoarseGuesser(evec,eval);
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a coarse space solver
|
||||||
|
//////////////////////////////////////////
|
||||||
|
int maxit=20000;
|
||||||
|
ConjugateGradient<CoarseVector> CG(1.0e-8,maxit,false);
|
||||||
|
ConjugateGradient<LatticeFermionD> CGfine(1.0e-8,10000,false);
|
||||||
|
ZeroGuesser<CoarseVector> CoarseZeroGuesser;
|
||||||
|
|
||||||
|
// HPDSolver<CoarseVector> HPDSolve(CoarseOp,CG,CoarseZeroGuesser);
|
||||||
|
HPDSolver<CoarseVector> HPDSolve(CoarseOp,CG,DeflCoarseGuesser);
|
||||||
|
c_res=Zero();
|
||||||
|
// HPDSolve(c_src,c_res); c_ref = c_res;
|
||||||
|
// std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
// std::cout << GridLogMessage<<"ref norm "<<norm2(c_ref)<<std::endl;
|
||||||
|
//////////////////////////////////////////////////////////////////////////
|
||||||
|
// Deflated (with real op EV's) solve for the projected coarse op
|
||||||
|
// Work towards ADEF1 in the coarse space
|
||||||
|
//////////////////////////////////////////////////////////////////////////
|
||||||
|
HPDSolver<CoarseVector> HPDSolveProj(CoarseOpProj,CG,DeflCoarseGuesser);
|
||||||
|
c_res=Zero();
|
||||||
|
// HPDSolveProj(c_src,c_res);
|
||||||
|
// std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
// std::cout << GridLogMessage<<"res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
// c_res = c_res - c_ref;
|
||||||
|
// std::cout << "Projected solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
//////////////////////////////////////////////////////////////////////
|
||||||
|
// Coarse ADEF1 with deflation space
|
||||||
|
//////////////////////////////////////////////////////////////////////
|
||||||
|
ChebyshevSmoother<CoarseVector,HermMatrix >
|
||||||
|
CoarseSmoother(1.0,37.,8,CoarseOpProj); // just go to sloppy 0.1 convergence
|
||||||
|
// CoarseSmoother(0.1,37.,8,CoarseOpProj); //
|
||||||
|
// CoarseSmoother(0.5,37.,6,CoarseOpProj); // 8 iter 0.36s
|
||||||
|
// CoarseSmoother(0.5,37.,12,CoarseOpProj); // 8 iter, 0.55s
|
||||||
|
// CoarseSmoother(0.5,37.,8,CoarseOpProj);// 7-9 iter
|
||||||
|
// CoarseSmoother(1.0,37.,8,CoarseOpProj); // 0.4 - 0.5s solve to 0.04, 7-9 iter
|
||||||
|
// ChebyshevSmoother<CoarseVector,HermMatrix > CoarseSmoother(0.5,36.,10,CoarseOpProj); // 311
|
||||||
|
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// CG, Cheby mode spacing 200,200
|
||||||
|
// Unprojected Coarse CG solve to 1e-8 : 190 iters, 4.9s
|
||||||
|
// Unprojected Coarse CG solve to 4e-2 : 33 iters, 0.8s
|
||||||
|
// Projected Coarse CG solve to 1e-8 : 100 iters, 0.36s
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// CoarseSmoother(1.0,48.,8,CoarseOpProj); 48 evecs
|
||||||
|
////////////////////////////////////////////////////////
|
||||||
|
// ADEF1 Coarse solve to 1e-8 : 44 iters, 2.34s 2.1x gain
|
||||||
|
// ADEF1 Coarse solve to 4e-2 : 7 iters, 0.4s
|
||||||
|
// HDCG 38 iters 162s
|
||||||
|
//
|
||||||
|
// CoarseSmoother(1.0,40.,8,CoarseOpProj); 48 evecs
|
||||||
|
// ADEF1 Coarse solve to 1e-8 : 37 iters, 2.0s 2.1x gain
|
||||||
|
// ADEF1 Coarse solve to 4e-2 : 6 iters, 0.36s
|
||||||
|
// HDCG 38 iters 169s
|
||||||
|
|
||||||
|
TwoLevelADEF1defl<CoarseVector>
|
||||||
|
cADEF1(1.0e-8, 500,
|
||||||
|
CoarseOp,
|
||||||
|
CoarseSmoother,
|
||||||
|
evec,eval);
|
||||||
|
|
||||||
|
// c_res=Zero();
|
||||||
|
// cADEF1(c_src,c_res);
|
||||||
|
// std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
// std::cout << GridLogMessage<<"cADEF1 res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
// c_res = c_res - c_ref;
|
||||||
|
// std::cout << "cADEF1 solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
// cADEF1.Tolerance = 4.0e-2;
|
||||||
|
// cADEF1.Tolerance = 1.0e-1;
|
||||||
|
// cADEF1.Tolerance = 5.0e-2;
|
||||||
|
// c_res=Zero();
|
||||||
|
// cADEF1(c_src,c_res);
|
||||||
|
// std::cout << GridLogMessage<<"src norm "<<norm2(c_src)<<std::endl;
|
||||||
|
// std::cout << GridLogMessage<<"cADEF1 res norm "<<norm2(c_res)<<std::endl;
|
||||||
|
// c_res = c_res - c_ref;
|
||||||
|
// std::cout << "cADEF1 solver error "<<norm2(c_res)<<std::endl;
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a smoother
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(10.0,100.0,10,FineHermOp); //499
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(3.0,100.0,10,FineHermOp); //383
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(1.0,100.0,10,FineHermOp); //328
|
||||||
|
// std::vector<RealD> los({0.5,1.0,3.0}); // 147/142/146 nbasis 1
|
||||||
|
// std::vector<RealD> los({1.0,2.0}); // Nbasis 24: 88,86 iterations
|
||||||
|
// std::vector<RealD> los({2.0,4.0}); // Nbasis 32 == 52, iters
|
||||||
|
// std::vector<RealD> los({2.0,4.0}); // Nbasis 40 == 36,36 iters
|
||||||
|
|
||||||
|
//
|
||||||
|
// Turns approx 2700 iterations into 340 fine multiplies with Nbasis 40
|
||||||
|
// Need to measure cost of coarse space.
|
||||||
|
//
|
||||||
|
// -- i) Reduce coarse residual -- 0.04
|
||||||
|
// -- ii) Lanczos on coarse space -- done
|
||||||
|
// -- iii) Possible 1 hop project and/or preconditioning it - easy - PrecCG it and
|
||||||
|
// use a limited stencil. Reread BFM code to check on evecs / deflation strategy with prec
|
||||||
|
//
|
||||||
|
std::vector<RealD> los({3.0}); // Nbasis 40 == 36,36 iters
|
||||||
|
|
||||||
|
// std::vector<int> ords({7,8,10}); // Nbasis 40 == 40,38,36 iters (320,342,396 mults)
|
||||||
|
std::vector<int> ords({7}); // Nbasis 40 == 40 iters (320 mults)
|
||||||
|
|
||||||
|
for(int l=0;l<los.size();l++){
|
||||||
|
|
||||||
|
RealD lo = los[l];
|
||||||
|
|
||||||
|
for(int o=0;o<ords.size();o++){
|
||||||
|
|
||||||
|
ConjugateGradient<CoarseVector> CGsloppy(5.0e-2,maxit,false);
|
||||||
|
HPDSolver<CoarseVector> HPDSolveSloppy(CoarseOp,CGsloppy,DeflCoarseGuesser);
|
||||||
|
|
||||||
|
// ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(lo,92,10,FineHermOp); // 36 best case
|
||||||
|
ChebyshevSmoother<LatticeFermionD,HermFineMatrix > Smoother(lo,92,ords[o],FineHermOp); // 311
|
||||||
|
|
||||||
|
//////////////////////////////////////////
|
||||||
|
// Build a HDCG solver
|
||||||
|
//////////////////////////////////////////
|
||||||
|
TwoLevelADEF2<LatticeFermion,CoarseVector,Subspace>
|
||||||
|
HDCG(1.0e-8, 100,
|
||||||
|
FineHermOp,
|
||||||
|
Smoother,
|
||||||
|
HPDSolveSloppy,
|
||||||
|
HPDSolve,
|
||||||
|
Aggregates);
|
||||||
|
|
||||||
|
TwoLevelADEF2<LatticeFermion,CoarseVector,Subspace>
|
||||||
|
HDCGdefl(1.0e-8, 100,
|
||||||
|
FineHermOp,
|
||||||
|
Smoother,
|
||||||
|
cADEF1,
|
||||||
|
HPDSolve,
|
||||||
|
Aggregates);
|
||||||
|
|
||||||
|
// result=Zero();
|
||||||
|
// HDCGdefl(src,result);
|
||||||
|
|
||||||
|
result=Zero();
|
||||||
|
HDCG(src,result);
|
||||||
|
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Standard CG
|
||||||
|
result=Zero();
|
||||||
|
CGfine(HermOpEO, src, result);
|
||||||
|
|
||||||
|
Grid_finalize();
|
||||||
|
return 0;
|
||||||
|
}
|
267
tests/debug/Test_general_coarse_pvdagm.cc
Normal file
267
tests/debug/Test_general_coarse_pvdagm.cc
Normal file
@ -0,0 +1,267 @@
|
|||||||
|
/*************************************************************************************
|
||||||
|
|
||||||
|
Grid physics library, www.github.com/paboyle/Grid
|
||||||
|
|
||||||
|
Source file: ./tests/Test_padded_cell.cc
|
||||||
|
|
||||||
|
Copyright (C) 2023
|
||||||
|
|
||||||
|
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||||
|
|
||||||
|
This program is free software; you can redistribute it and/or modify
|
||||||
|
it under the terms of the GNU General Public License as published by
|
||||||
|
the Free Software Foundation; either version 2 of the License, or
|
||||||
|
(at your option) any later version.
|
||||||
|
|
||||||
|
This program is distributed in the hope that it will be useful,
|
||||||
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||||
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||||
|
GNU General Public License for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License along
|
||||||
|
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||||
|
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||||
|
|
||||||
|
See the full license in the file "LICENSE" in the top level distribution directory
|
||||||
|
*************************************************************************************/
|
||||||
|
/* END LEGAL */
|
||||||
|
#include <Grid/Grid.h>
|
||||||
|
#include <Grid/lattice/PaddedCell.h>
|
||||||
|
#include <Grid/stencil/GeneralLocalStencil.h>
|
||||||
|
|
||||||
|
#include <Grid/algorithms/iterative/PrecGeneralisedConjugateResidual.h>
|
||||||
|
#include <Grid/algorithms/iterative/PrecGeneralisedConjugateResidualNonHermitian.h>
|
||||||
|
#include <Grid/algorithms/iterative/BiCGSTAB.h>
|
||||||
|
|
||||||
|
using namespace std;
|
||||||
|
using namespace Grid;
|
||||||
|
|
||||||
|
template<class Field>
|
||||||
|
class HermOpAdaptor : public LinearOperatorBase<Field>
|
||||||
|
{
|
||||||
|
LinearOperatorBase<Field> & wrapped;
|
||||||
|
public:
|
||||||
|
HermOpAdaptor(LinearOperatorBase<Field> &wrapme) : wrapped(wrapme) {};
|
||||||
|
void OpDiag (const Field &in, Field &out) { assert(0); }
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp) { assert(0); }
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out){ assert(0); };
|
||||||
|
void Op (const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
void AdjOp (const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ assert(0); }
|
||||||
|
void HermOp(const Field &in, Field &out){
|
||||||
|
wrapped.HermOp(in,out);
|
||||||
|
}
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
template<class Matrix,class Field>
|
||||||
|
class PVdagMLinearOperator : public LinearOperatorBase<Field> {
|
||||||
|
Matrix &_Mat;
|
||||||
|
Matrix &_PV;
|
||||||
|
public:
|
||||||
|
PVdagMLinearOperator(Matrix &Mat,Matrix &PV): _Mat(Mat),_PV(PV){};
|
||||||
|
|
||||||
|
void OpDiag (const Field &in, Field &out) { assert(0); }
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp) { assert(0); }
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out){ assert(0); };
|
||||||
|
void Op (const Field &in, Field &out){
|
||||||
|
Field tmp(in.Grid());
|
||||||
|
_Mat.M(in,tmp);
|
||||||
|
_PV.Mdag(tmp,out);
|
||||||
|
}
|
||||||
|
void AdjOp (const Field &in, Field &out){
|
||||||
|
Field tmp(in.Grid());
|
||||||
|
_PV.M(tmp,out);
|
||||||
|
_Mat.Mdag(in,tmp);
|
||||||
|
}
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ assert(0); }
|
||||||
|
void HermOp(const Field &in, Field &out){
|
||||||
|
std::cout << "HermOp"<<std::endl;
|
||||||
|
Field tmp(in.Grid());
|
||||||
|
_Mat.M(in,tmp);
|
||||||
|
_PV.Mdag(tmp,out);
|
||||||
|
_PV.M(out,tmp);
|
||||||
|
_Mat.Mdag(tmp,out);
|
||||||
|
std::cout << "HermOp done "<<norm2(out)<<std::endl;
|
||||||
|
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
template<class Field> class DumbOperator : public LinearOperatorBase<Field> {
|
||||||
|
public:
|
||||||
|
LatticeComplex scale;
|
||||||
|
DumbOperator(GridBase *grid) : scale(grid)
|
||||||
|
{
|
||||||
|
scale = 0.0;
|
||||||
|
LatticeComplex scalesft(grid);
|
||||||
|
LatticeComplex scaletmp(grid);
|
||||||
|
for(int d=0;d<4;d++){
|
||||||
|
Lattice<iScalar<vInteger> > x(grid); LatticeCoordinate(x,d+1);
|
||||||
|
LatticeCoordinate(scaletmp,d+1);
|
||||||
|
scalesft = Cshift(scaletmp,d+1,1);
|
||||||
|
scale = 100.0*scale + where( mod(x ,2)==(Integer)0, scalesft,scaletmp);
|
||||||
|
}
|
||||||
|
std::cout << " scale\n" << scale << std::endl;
|
||||||
|
}
|
||||||
|
// Support for coarsening to a multigrid
|
||||||
|
void OpDiag (const Field &in, Field &out) {};
|
||||||
|
void OpDir (const Field &in, Field &out,int dir,int disp){};
|
||||||
|
void OpDirAll (const Field &in, std::vector<Field> &out) {};
|
||||||
|
|
||||||
|
void Op (const Field &in, Field &out){
|
||||||
|
out = scale * in;
|
||||||
|
}
|
||||||
|
void AdjOp (const Field &in, Field &out){
|
||||||
|
out = scale * in;
|
||||||
|
}
|
||||||
|
void HermOp(const Field &in, Field &out){
|
||||||
|
double n1, n2;
|
||||||
|
HermOpAndNorm(in,out,n1,n2);
|
||||||
|
}
|
||||||
|
void HermOpAndNorm(const Field &in, Field &out,double &n1,double &n2){
|
||||||
|
ComplexD dot;
|
||||||
|
|
||||||
|
out = scale * in;
|
||||||
|
|
||||||
|
dot= innerProduct(in,out);
|
||||||
|
n1=real(dot);
|
||||||
|
|
||||||
|
dot = innerProduct(out,out);
|
||||||
|
n2=real(dot);
|
||||||
|
}
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
int main (int argc, char ** argv)
|
||||||
|
{
|
||||||
|
Grid_init(&argc,&argv);
|
||||||
|
|
||||||
|
const int Ls=2;
|
||||||
|
|
||||||
|
GridCartesian * UGrid = SpaceTimeGrid::makeFourDimGrid(GridDefaultLatt(), GridDefaultSimd(Nd,vComplex::Nsimd()),GridDefaultMpi());
|
||||||
|
GridRedBlackCartesian * UrbGrid = SpaceTimeGrid::makeFourDimRedBlackGrid(UGrid);
|
||||||
|
|
||||||
|
GridCartesian * FGrid = SpaceTimeGrid::makeFiveDimGrid(Ls,UGrid);
|
||||||
|
GridRedBlackCartesian * FrbGrid = SpaceTimeGrid::makeFiveDimRedBlackGrid(Ls,UGrid);
|
||||||
|
|
||||||
|
// Construct a coarsened grid
|
||||||
|
Coordinate clatt = GridDefaultLatt();
|
||||||
|
for(int d=0;d<clatt.size();d++){
|
||||||
|
clatt[d] = clatt[d]/4;
|
||||||
|
}
|
||||||
|
GridCartesian *Coarse4d = SpaceTimeGrid::makeFourDimGrid(clatt, GridDefaultSimd(Nd,vComplex::Nsimd()),GridDefaultMpi());;
|
||||||
|
GridCartesian *Coarse5d = SpaceTimeGrid::makeFiveDimGrid(1,Coarse4d);
|
||||||
|
|
||||||
|
std::vector<int> seeds4({1,2,3,4});
|
||||||
|
std::vector<int> seeds5({5,6,7,8});
|
||||||
|
std::vector<int> cseeds({5,6,7,8});
|
||||||
|
GridParallelRNG RNG5(FGrid); RNG5.SeedFixedIntegers(seeds5);
|
||||||
|
GridParallelRNG RNG4(UGrid); RNG4.SeedFixedIntegers(seeds4);
|
||||||
|
GridParallelRNG CRNG(Coarse5d);CRNG.SeedFixedIntegers(cseeds);
|
||||||
|
|
||||||
|
LatticeFermion src(FGrid); random(RNG5,src);
|
||||||
|
LatticeFermion result(FGrid); result=Zero();
|
||||||
|
LatticeFermion ref(FGrid); ref=Zero();
|
||||||
|
LatticeFermion tmp(FGrid);
|
||||||
|
LatticeFermion err(FGrid);
|
||||||
|
LatticeGaugeField Umu(UGrid);
|
||||||
|
|
||||||
|
FieldMetaData header;
|
||||||
|
std::string file("ckpoint_lat.4000");
|
||||||
|
NerscIO::readConfiguration(Umu,header,file);
|
||||||
|
//Umu = 1.0;
|
||||||
|
|
||||||
|
RealD mass=0.5;
|
||||||
|
RealD M5=1.8;
|
||||||
|
|
||||||
|
DomainWallFermionD Ddwf(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,mass,M5);
|
||||||
|
DomainWallFermionD Dpv(Umu,*FGrid,*FrbGrid,*UGrid,*UrbGrid,1.0,M5);
|
||||||
|
|
||||||
|
const int nbasis = 1;
|
||||||
|
const int cb = 0 ;
|
||||||
|
LatticeFermion prom(FGrid);
|
||||||
|
|
||||||
|
typedef GeneralCoarsenedMatrix<vSpinColourVector,vTComplex,nbasis> LittleDiracOperator;
|
||||||
|
typedef LittleDiracOperator::CoarseVector CoarseVector;
|
||||||
|
|
||||||
|
NextToNearestStencilGeometry5D geom(Coarse5d);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
|
||||||
|
PVdagMLinearOperator<DomainWallFermionD,LatticeFermionD> PVdagM(Ddwf,Dpv);
|
||||||
|
HermOpAdaptor<LatticeFermionD> HOA(PVdagM);
|
||||||
|
|
||||||
|
// Run power method on HOA??
|
||||||
|
PowerMethod<LatticeFermion> PM; PM(HOA,src);
|
||||||
|
|
||||||
|
// Warning: This routine calls PVdagM.Op, not PVdagM.HermOp
|
||||||
|
typedef Aggregation<vSpinColourVector,vTComplex,nbasis> Subspace;
|
||||||
|
Subspace AggregatesPD(Coarse5d,FGrid,cb);
|
||||||
|
AggregatesPD.CreateSubspaceChebyshev(RNG5,
|
||||||
|
HOA,
|
||||||
|
nbasis,
|
||||||
|
5000.0,
|
||||||
|
0.02,
|
||||||
|
100,
|
||||||
|
50,
|
||||||
|
50,
|
||||||
|
0.0);
|
||||||
|
|
||||||
|
LittleDiracOperator LittleDiracOpPV(geom,FGrid,Coarse5d);
|
||||||
|
LittleDiracOpPV.CoarsenOperator(PVdagM,AggregatesPD);
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"Testing coarsened operator "<<std::endl;
|
||||||
|
|
||||||
|
CoarseVector c_src (Coarse5d);
|
||||||
|
CoarseVector c_res (Coarse5d);
|
||||||
|
CoarseVector c_proj(Coarse5d);
|
||||||
|
|
||||||
|
std::vector<LatticeFermion> subspace(nbasis,FGrid);
|
||||||
|
subspace=AggregatesPD.subspace;
|
||||||
|
|
||||||
|
Complex one(1.0);
|
||||||
|
c_src = one; // 1 in every element for vector 1.
|
||||||
|
blockPromote(c_src,err,subspace);
|
||||||
|
|
||||||
|
prom=Zero();
|
||||||
|
for(int b=0;b<nbasis;b++){
|
||||||
|
prom=prom+subspace[b];
|
||||||
|
}
|
||||||
|
err=err-prom;
|
||||||
|
std::cout<<GridLogMessage<<"Promoted back from subspace: err "<<norm2(err)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"c_src "<<norm2(c_src)<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"prom "<<norm2(prom)<<std::endl;
|
||||||
|
|
||||||
|
PVdagM.Op(prom,tmp);
|
||||||
|
blockProject(c_proj,tmp,subspace);
|
||||||
|
std::cout<<GridLogMessage<<" Called Big Dirac Op "<<norm2(tmp)<<std::endl;
|
||||||
|
|
||||||
|
LittleDiracOpPV.M(c_src,c_res);
|
||||||
|
std::cout<<GridLogMessage<<" Called Little Dirac Op c_src "<< norm2(c_src) << " c_res "<< norm2(c_res) <<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Little dop : "<<norm2(c_res)<<std::endl;
|
||||||
|
// std::cout<<GridLogMessage<<" Little "<< c_res<<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<"Big dop in subspace : "<<norm2(c_proj)<<std::endl;
|
||||||
|
// std::cout<<GridLogMessage<<" Big "<< c_proj<<std::endl;
|
||||||
|
c_proj = c_proj - c_res;
|
||||||
|
std::cout<<GridLogMessage<<" ldop error: "<<norm2(c_proj)<<std::endl;
|
||||||
|
// std::cout<<GridLogMessage<<" error "<< c_proj<<std::endl;
|
||||||
|
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<"*******************************************"<<std::endl;
|
||||||
|
std::cout<<GridLogMessage<<std::endl;
|
||||||
|
std::cout<<GridLogMessage << "Done "<< std::endl;
|
||||||
|
|
||||||
|
Grid_finalize();
|
||||||
|
return 0;
|
||||||
|
}
|
Reference in New Issue
Block a user