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Commit Graph

  • 5f192ad30f Thread pool implementation portelli 2021-11-28 23:26:17 +00:00
  • ccb837a244 Update build-macos.yml portelli 2021-11-17 16:37:05 +00:00
  • 499e173bac Update Readme.md master portelli 2021-11-17 16:20:56 +00:00
  • 75485219d8 CI uses HDF5 1.10.8 hoping to solve compilation issues on Big Sur portelli 2021-11-17 16:17:45 +00:00
  • a3054a0f44 first GitHub CI portelli 2021-11-17 16:06:26 +00:00
  • d6e5ba724d CI scripts expose number of build tasks portelli 2021-11-16 21:35:35 +00:00
  • 9341a31cf4 gitignore update portelli 2021-11-16 21:34:39 +00:00
  • b4b6bd22fa compatible with Minuit2 in ROOT portelli 2021-11-16 21:34:25 +00:00
  • 6eca1e6fc6 i) removed pvalue fit criteria ii) overloaded fit() to output FitResult object of a particular sample AndrewYongZhenNing 2021-10-07 17:41:36 +01:00
  • 28aff209c4 New function fitSample to make XYSampleData::fit more modular: Eg application: In fit scans, one may only want central fit for the uncorr fit to speed up process. AndrewYongZhenNing 2021-09-22 12:38:54 +01:00
  • 9c5ade4989 Changed fit criteria from chi2PerDof to pValue. AndrewYongZhenNing 2021-09-22 12:35:41 +01:00
  • f0739047c3 XYSampleData throws Runtime exception error if central fit's chi2PerDof exceeds user-set/default bounds for chi2PerDof. This can be used to skip fits with bad fitranges. AndrewYongZhenNing 2021-08-25 15:59:00 +01:00
  • 6990d16ca0 Merge remote-tracking branch 'fork/develop' into develop AndrewYongZhenNing 2021-08-25 14:55:52 +01:00
  • 80e3c27d8e Added private variables to set bound on chi2perDof. This is used tas criteria for fit scans. TODO: modify to exception handling. aznyong 2021-08-25 14:53:52 +01:00
  • 2b52ee4512 Merge remote-tracking branch 'fork/develop' into develop AndrewYongZhenNing 2021-05-21 15:33:52 +01:00
  • af31d1564d Previous commit failed to compile: needed to remove leftover lines. aznyong 2021-05-21 15:33:34 +01:00
  • 938b96bf95 Merge remote-tracking branch 'fork/develop' into develop AndrewYongZhenNing 2021-05-21 15:30:02 +01:00
  • 375b8fd038 Removed criteria of rejecting fits if sample fit chi2PerDof is bad. aznyong 2021-05-21 15:29:24 +01:00
  • a7d020e0f9 Merge remote-tracking branch 'fork/develop' into develop AndrewYongZhenNing 2021-05-20 11:51:53 +01:00
  • c48e2be20b Added feature to reject fit if 25% of sample fits are bad (with chi2perdof > 2 or is a NaN) aznyong 2021-05-20 11:49:03 +01:00
  • 113b433b5e Merge remote-tracking branch 'fork/develop' into develop AndrewYongZhenNing 2021-05-20 11:14:53 +01:00
  • 9e8d534635 New methods in XYSampleData class to skip fits that are non-converging/large chi2PerDof. This is tracked by boolean goodFit_. aznyong 2021-05-20 11:04:21 +01:00
  • 68d22eca11 Badges update portelli 2020-11-27 17:09:31 +00:00
  • d4704267d6 Dev version number portelli 2020-11-27 13:34:58 +00:00
  • d67a25245e Merge tag 'v3.5.1' into develop portelli 2020-11-27 13:34:26 +00:00
  • 2de70a2775 Merge branch 'release/v3.5.1' 3.5.1 portelli 2020-11-27 13:34:26 +00:00
  • cfb2c0c5e8 version number bump portelli 2020-11-27 13:33:39 +00:00
  • 0160c88c29 bootstrap script fix portelli 2020-11-17 11:56:10 +00:00
  • 376bdfc38b Remove archaic error is DISPLAY is not set portelli 2020-11-17 11:50:52 +00:00
  • 0cec36dded Eigen update portelli 2020-11-17 11:20:16 +00:00
  • 0cda9e20cd Warning suppression portelli 2020-11-17 11:19:51 +00:00
  • 1b12f2ca2d latan-sample-fake now takes option -r/--seed where seed can be specified if fake bootstrap samples with 100% correlation are needed. aznyong 2020-11-13 07:56:58 +00:00
  • ddee922e72 1) restored original definition of sinh in makeSinhModel() and its init in parameterGuess(). 2) fold definition includes sign factor due to cosh/sinh model. aznyong 2020-07-10 08:33:28 +01:00
  • 7b3b203ca9 Merge remote-tracking branch 'upstream/develop' into develop aznyong 2020-07-07 10:09:01 +01:00
  • 3e3cdf2d69 2pt-fit.cpp now has correct number of arguments for fold function if --fold is called. aznyong 2020-07-07 10:07:48 +01:00
  • b6c2efa666 1) fold now requires second argument: modelPar to properly fold correlators with cosh/sinh form. 2) makeSinhModel has the appropriate alternate sign s.t the prefactor remains positive. 3) parameterGuess uses correct analytic form for sinh-type correlator's init(1), corresponding to the prefactor. aznyong 2020-07-07 10:07:05 +01:00
  • 2b9508c20f Merge pull request #18 from AndrewYongZhenNing/develop portelli 2020-05-08 18:53:05 +01:00
  • 417e068485 Swapped p[0] -> p[1] such that p[0] is always the effective mass parameter. aznyong 2020-05-07 17:08:12 +01:00
  • 524c11d2ba Merge pull request #17 from AndrewYongZhenNing/develop portelli 2020-04-30 17:22:10 +01:00
  • 3602bbd368 Merging with upstream before pull request. aznyong 2020-04-30 10:50:54 +01:00
  • bb4e9e1d42 Added else if block for CorrelatorType::linear to set its limits. aznyong 2020-04-30 10:50:08 +01:00
  • 4347511e39 Merge pull request #16 from AndrewYongZhenNing/develop portelli 2020-02-21 15:22:22 +01:00
  • e944f9c4aa For 'cst' model, changed bug from x[0] -> p[0]. aznyong 2020-02-21 11:18:02 +00:00
  • 3e70792a06 correlator transform utilities portelli 2020-02-02 19:43:14 +01:00
  • f014003593 minor FFT leak portelli 2020-02-02 19:42:54 +01:00
  • c37e6e1bfd effective mass fix portelli 2020-01-28 20:15:28 +00:00
  • 0e8b9d2a8f Merge branch 'feature/correlator-fitter' into develop portelli 2020-01-28 17:56:08 +00:00
  • 1d6a66263d code cleaning portelli 2020-01-28 17:55:47 +00:00
  • 1775f4992b rewrite of the 2pt fitter using the new physics classes portelli 2020-01-28 17:35:07 +00:00
  • 685d433032 minor fixes in new physics classes portelli 2020-01-28 17:34:37 +00:00
  • 1bde8822b1 band plot does not rely anymore on tac & tail -r commands portelli 2020-01-28 17:34:00 +00:00
  • f826f30e82 first stab at correlator fit utility classes portelli 2020-01-23 19:11:01 +00:00
  • 51efb2a81f nlopt CI linking fix portelli 2020-01-13 16:40:04 +00:00
  • 5f5ecf241f Copyright year update portelli 2020-01-13 09:57:06 +00:00
  • d85860a2ef CI scripts update portelli 2020-01-11 20:16:56 +00:00
  • d894aa185c bigger font in plots portelli 2020-01-11 17:23:02 +00:00
  • 0fbe00da0d gnuplot path search fix portelli 2020-01-11 16:48:36 +00:00
  • caeb78b143 more default options when trying to localise gnuplot portelli 2020-01-11 16:34:05 +00:00
  • 9f98ed42c3 Haswell is the default architecture for CI builds portelli 2020-01-10 17:10:33 +00:00
  • d43197ccc7 public access to gnuplot path portelli 2020-01-10 15:15:46 +00:00
  • 4b5ad9014c more script tuning portelli 2020-01-10 14:15:40 +00:00
  • 2e2e676196 more CI script tuning portelli 2020-01-10 12:09:39 +00:00
  • c0dac8063e scripts fine-tuning portelli 2020-01-10 11:59:07 +00:00
  • 29863a348b CI build script minor fixes portelli 2020-01-09 17:35:53 +00:00
  • a1fae4356e CI scripts build a static version of NLOpt portelli 2020-01-09 13:43:52 +00:00
  • 5e891063e1 plot fixes when reploting the same Plot object portelli 2020-01-09 13:43:27 +00:00
  • 97267c196f saving PDF is optional when saving plot portelli 2020-01-09 13:42:59 +00:00
  • c81316ef32 development version number portelli 2019-12-12 18:24:29 +00:00
  • 267bd33a97 Merge tag '3.5' into develop portelli 2019-12-12 18:23:50 +00:00
  • f356700a4f Merge branch 'release/3.5' 3.5 portelli 2019-12-12 18:23:50 +00:00
  • dfaea5f156 Readme and version number update portelli 2019-12-12 18:23:35 +00:00
  • 7163a55775 scan mode in 2-pt fitter portelli 2019-12-12 18:07:03 +00:00
  • c7ed995052 quieter gnuplot call portelli 2019-12-12 18:06:43 +00:00
  • 1c55c93669 option parser checks for duplicated options portelli 2019-12-12 18:05:13 +00:00
  • 21812e1fd7 added NaN numbers portelli 2019-12-12 18:04:57 +00:00
  • 0ca4e0ef17 p-value now 2-sided and added chi^2 CCDF portelli 2019-12-12 18:04:33 +00:00
  • d30303bb54 Merge pull request #14 from AndrewYongZhenNing/develop portelli 2019-11-28 16:21:45 +00:00
  • ae77d9a2fd Moved file to analysis work directory on local machine AndrewYongZhenNing 2019-11-28 16:00:28 +00:00
  • 4e1f9db6fd Moved file to analysis work directory on local machine AndrewYongZhenNing 2019-11-28 16:00:17 +00:00
  • 87e15f8331 Minor fixes on save variable name. aznyong 2019-11-28 15:51:24 +00:00
  • c3d0f93e1a Removed coth model and changed save option name aznyong 2019-11-28 15:49:28 +00:00
  • 6fe58aba18 Too much contributors to be meaningfully listed here portelli 2019-11-28 15:04:45 +00:00
  • f047cd9821 readme update portelli 2019-11-28 15:03:39 +00:00
  • ec5e6c6920 build system update portelli 2019-11-28 12:30:17 +00:00
  • 8cfbaeb9ce compatibility fix portelli 2019-11-08 13:11:27 +00:00
  • 35a20ed713 matrix plot fix portelli 2019-11-08 12:58:38 +00:00
  • 161c06292e Suppresses plot when save option is swithced on aznyong 2019-10-14 09:22:46 +01:00
  • 2096238ff6 Last commit before sync with original repo aznyong 2019-07-29 19:39:14 +08:00
  • 4cab49cd92 Added cotanh fit function aznyong 2019-05-28 07:38:43 +01:00
  • eb73d2f269 CI scripts update portelli 2019-04-26 17:36:44 +01:00
  • e44460c9fd permission fix portelli 2019-04-26 16:55:14 +01:00
  • b3bf75f93a build GSL in CI flow portelli 2019-04-26 16:54:04 +01:00
  • b04338bf36 Plot prediction bands without samples portelli 2019-04-26 16:33:38 +01:00
  • 070f91a4ed correlation matrix plot utility can (optionally) save matrices portelli 2019-04-04 20:05:23 +01:00
  • 11ecea3c6d const-correctness fix portelli 2019-04-04 20:04:56 +01:00
  • c49da2ec2d Merge branch 'master' into tmp-merge aznyong 2019-03-28 11:28:55 +00:00
  • 4a95bc39c8 Last commit before merge iwth upstream aznyong 2019-03-27 07:13:54 +00:00
  • cb2f6bf0aa Plot: dashed lines portelli 2019-03-25 23:20:25 +00:00
  • e37f2ab124 multivariate Gaussian RNG portelli 2019-03-25 23:20:09 +00:00
  • 0bf6d8c8ae line plots portelli 2019-03-21 17:40:13 +00:00