Scripts

Feature/wilson clover 5d

Grid/algorithms/FFT.h

@@ -168,6 +168,7 @@ public:
   template<class vobj>
   void FFT_dim(Lattice<vobj> &result,const Lattice<vobj> &source,int dim, int sign){
 #ifndef HAVE_FFTW
+    std::cerr << "FFTW is not compiled but is called"<<std::endl;
     assert(0);
 #else
     conformable(result.Grid(),vgrid);
@@ -190,7 +191,8 @@ public:
       
     Lattice<sobj> pgbuf(&pencil_g);
     autoView(pgbuf_v , pgbuf, CpuWrite);
-
+    //std::cout << "CPU view" << std::endl;
+    
     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar;
     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan;
       
@@ -213,6 +215,7 @@ public:
     else if ( sign == forward ) div = 1.0;
     else assert(0);
       
+    //std::cout << GridLogPerformance<<"Making FFTW plan" << std::endl;
     FFTW_plan p;
     {
       FFTW_scalar *in = (FFTW_scalar *)&pgbuf_v[0];
@@ -226,6 +229,7 @@ public:
     }
       
     // Barrel shift and collect global pencil
+    //std::cout << GridLogPerformance<<"Making pencil" << std::endl;
     Coordinate lcoor(Nd), gcoor(Nd);
     result = source;
     int pc = processor_coor[dim];
@@ -247,6 +251,7 @@ public:
       }
     }
       
+    //std::cout <<GridLogPerformance<< "Looping orthog" << std::endl;
     // Loop over orthog coords
     int NN=pencil_g.lSites();
     GridStopWatch timer;
@@ -269,6 +274,7 @@ public:
     usec += timer.useconds();
     flops+= flops_call*NN;
       
+    //std::cout <<GridLogPerformance<< "Writing back results " << std::endl;
     // writing out result
     {
       autoView(pgbuf_v,pgbuf,CpuRead);
@@ -285,6 +291,7 @@ public:
     }
     result = result*div;
       
+    //std::cout <<GridLogPerformance<< "Destroying plan " << std::endl;
     // destroying plan
     FFTW<scalar>::fftw_destroy_plan(p);
 #endif

Grid/algorithms/LinearOperator.h

@@ -277,6 +277,38 @@ public:
     assert(0);
   }
 };
+template<class Matrix,class Field>
+class ShiftedNonHermitianLinearOperator : public LinearOperatorBase<Field> {
+  Matrix &_Mat;
+  RealD shift;
+public:
+  ShiftedNonHermitianLinearOperator(Matrix &Mat,RealD shft): _Mat(Mat),shift(shft){};
+  // Support for coarsening to a multigrid
+  void OpDiag (const Field &in, Field &out) {
+    _Mat.Mdiag(in,out);
+    out = out + shift*in;
+  }
+  void OpDir  (const Field &in, Field &out,int dir,int disp) {
+    _Mat.Mdir(in,out,dir,disp);
+  }
+  void OpDirAll  (const Field &in, std::vector<Field> &out){
+    _Mat.MdirAll(in,out);
+  };
+  void Op     (const Field &in, Field &out){
+    _Mat.M(in,out);
+    out = out + shift * in;
+  }
+  void AdjOp     (const Field &in, Field &out){
+    _Mat.Mdag(in,out);
+    out = out + shift * in;
+  }
+  void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
+    assert(0);
+  }
+  void HermOp(const Field &in, Field &out){
+    assert(0);
+  }
+};
 
 //////////////////////////////////////////////////////////
 // Even Odd Schur decomp operators; there are several

Grid/algorithms/approx/Chebyshev.h

@@ -269,7 +269,9 @@ public:
     RealD xscale = 2.0/(hi-lo);
     RealD mscale = -(hi+lo)/(hi-lo);
     Linop.HermOp(T0,y);
+    grid->Barrier();
     axpby(T1,xscale,mscale,y,in);
+    grid->Barrier();
 
     // sum = .5 c[0] T0 + c[1] T1
     //    out = ()*T0 + Coeffs[1]*T1;

Grid/algorithms/blas/BatchedBlas.h

@@ -55,10 +55,10 @@ NAMESPACE_BEGIN(Grid);
   typedef cublasHandle_t gridblasHandle_t;
 #endif
 #ifdef GRID_SYCL
-  typedef cl::sycl::queue *gridblasHandle_t;
+  typedef sycl::queue *gridblasHandle_t;
 #endif
 #ifdef GRID_ONE_MKL
-  typedef cl::sycl::queue *gridblasHandle_t;
+  typedef sycl::queue *gridblasHandle_t;
 #endif
 #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) && !defined(GRID_ONE_MKL)
   typedef int32_t gridblasHandle_t;
@@ -89,9 +89,9 @@ public:
       gridblasHandle = theGridAccelerator;
 #endif
 #ifdef GRID_ONE_MKL
-      cl::sycl::gpu_selector selector;
+      sycl::gpu_selector selector;
-      cl::sycl::device selectedDevice { selector };
+      sycl::device selectedDevice { selector };
-      cl::sycl::property_list q_prop{cl::sycl::property::queue::in_order()};
+      sycl::property_list q_prop{sycl::property::queue::in_order()};
       gridblasHandle =new sycl::queue (selectedDevice,q_prop);
 #endif
       gridblasInit=1;
@@ -208,8 +208,8 @@ public:
     assert(Bkn.size()==batchCount);
     assert(Cmn.size()==batchCount);
 
-    assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose
+    //assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose
-    assert(OpB!=GridBLAS_OP_T);
+    //assert(OpB!=GridBLAS_OP_T);
 
     int lda = m; // m x k column major
     int ldb = k; // k x n column major
@@ -367,28 +367,67 @@ public:
 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  else
+	    eCmn = alpha * eAmk * eBkn ;
         });
       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_N) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.adjoint() * eBkn ;
+	  });
+      } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m);
+	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],k,n);
+	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_C) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ;
+	  else
+	    eCmn = alpha * eAmk * eBkn.adjoint() ;
+	  });
+      } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],m,k);
+	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k);
+	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
+	  eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
 	  });
       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_C) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  else
+	    eCmn = alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  } );
+      } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m);
+	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k);
+	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n);
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn.transpose() ;
 	  } );
       } else { 
 	assert(0);
@@ -414,8 +453,8 @@ public:
     RealD t2=usecond();
     int32_t batchCount = Amk.size();
 
-    assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose
+    //assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose
-    assert(OpB!=GridBLAS_OP_T);
+    //assert(OpB!=GridBLAS_OP_T);
 
     int lda = m; // m x k column major
     int ldb = k; // k x n column major
@@ -514,28 +553,70 @@ public:
 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  else
+	    eCmn = alpha * eAmk * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_N) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.adjoint() * eBkn ;
+	  });
+      } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m);
+	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],k,n);
+	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_C) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ;
+	  else
+	    eCmn = alpha * eAmk * eBkn.adjoint() ;
+	  });
+      } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],m,k);
+	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k);
+	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk * eBkn.transpose() ;
 	  });
       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_C) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  else
+	    eCmn = alpha * eAmk.adjoint() * eBkn.adjoint() ;
+	  } );
+      } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) {
+	thread_for (p, batchCount, {
+	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m);
+	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k);
+	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n);
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn.transpose() ;
 	  } );
       } else { 
 	assert(0);
@@ -661,29 +742,41 @@ public:
 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  else
+	    eCmn = alpha * eAmk * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk * eBkn.transpose() ;	  
 	  });
       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  if (std::abs(beta) != 0.0)
-	  } );
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn.transpose() ;
+	  });
       } else { 
 	assert(0);
       }
@@ -809,28 +902,40 @@ public:
 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn ;
+	  else
+	    eCmn = alpha * eAmk * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],k,n);
 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn ;
 	  });
       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],m,k);
 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk * eBkn.transpose() ;
 	  });
       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) {
 	thread_for (p, batchCount, {
 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],k,m);
 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],n,k);
 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n);
-	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  if (std::abs(beta) != 0.0)
+	    eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ;
+	  else
+	    eCmn = alpha * eAmk.transpose() * eBkn.transpose() ;
 	  });
       } else { 
 	assert(0);

Grid/algorithms/iterative/ConjugateGradientMixedPrec.h

@@ -116,14 +116,14 @@ NAMESPACE_BEGIN(Grid);
       //Compute double precision rsd and also new RHS vector.
       Linop_d.HermOp(sol_d, tmp_d);
       RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector
-      
+      std::cout<<GridLogMessage<<" rsd norm "<<norm<<std::endl;
       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration " <<outer_iter<<" residual "<< norm<< " target "<< stop<<std::endl;
 
       if(norm < OuterLoopNormMult * stop){
 	std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration converged on iteration " <<outer_iter <<std::endl;
 	break;
       }
-      while(norm * inner_tol * inner_tol < stop) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ??
+      while(norm * inner_tol * inner_tol < stop*1.01) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ??
 
       PrecChangeTimer.Start();
       precisionChange(src_f, src_d, pc_wk_dp_to_sp);

Grid/algorithms/iterative/ConjugateGradientMultiShift.h

@@ -102,11 +102,11 @@ public:
     assert(mass.size()==nshift);
     assert(mresidual.size()==nshift);
   
-    // dynamic sized arrays on stack; 2d is a pain with vector
+    // remove dynamic sized arrays on stack; 2d is a pain with vector
-    RealD  bs[nshift];
+    std::vector<RealD>  bs(nshift);
-    RealD  rsq[nshift];
+    std::vector<RealD>  rsq(nshift);
-    RealD  z[nshift][2];
+    std::vector<std::array<RealD,2> >  z(nshift);
-    int     converged[nshift];
+    std::vector<int>     converged(nshift);
   
     const int       primary =0;
   

Grid/algorithms/iterative/ConjugateGradientMultiShiftCleanup.h

@@ -123,11 +123,11 @@ public:
     assert(mresidual.size()==nshift);
   
     // dynamic sized arrays on stack; 2d is a pain with vector
-    RealD  bs[nshift];
+    std::vector<RealD>  bs(nshift);
-    RealD  rsq[nshift];
+    std::vector<RealD>  rsq(nshift);
-    RealD  rsqf[nshift];
+    std::vector<RealD>  rsqf(nshift);
-    RealD  z[nshift][2];
+    std::vector<std::array<RealD,2> >  z(nshift);
-    int     converged[nshift];
+    std::vector<int>     converged(nshift);
   
     const int       primary =0;
   

Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h

@@ -156,11 +156,11 @@ public:
     assert(mresidual.size()==nshift);
   
     // dynamic sized arrays on stack; 2d is a pain with vector
-    RealD  bs[nshift];
+    std::vector<RealD>  bs(nshift);
-    RealD  rsq[nshift];
+    std::vector<RealD>  rsq(nshift);
-    RealD  rsqf[nshift];
+    std::vector<RealD>  rsqf(nshift);
-    RealD  z[nshift][2];
+    std::vector<std::array<RealD,2> >  z(nshift);
-    int     converged[nshift];
+    std::vector<int>     converged(nshift);
   
     const int       primary =0;
   

Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h

@@ -245,9 +245,10 @@ until convergence
 	_HermOp(src_n,tmp);
 	//	std::cout << GridLogMessage<< tmp<<std::endl; exit(0);
 	//	std::cout << GridLogIRL << " _HermOp " << norm2(tmp) << std::endl;
-	RealD vnum = real(innerProduct(src_n,tmp)); // HermOp.
+//	RealD vnum = real(innerProduct(src_n,tmp)); // HermOp.
+	RealD vnum = real(innerProduct(tmp,tmp)); // HermOp^2.
 	RealD vden = norm2(src_n);
-	RealD na = vnum/vden;
+	RealD na = std::sqrt(vnum/vden);
 	if (fabs(evalMaxApprox/na - 1.0) < 0.0001)
 	  i=_MAX_ITER_IRL_MEVAPP_;
 	evalMaxApprox = na;
@@ -255,6 +256,7 @@ until convergence
 	src_n = tmp;
       }
     }
+    std::cout << GridLogIRL << " Final evalMaxApprox  " << evalMaxApprox << std::endl;
 	
     std::vector<RealD> lme(Nm);  
     std::vector<RealD> lme2(Nm);

Grid/algorithms/iterative/PrecGeneralisedConjugateResidualNonHermitian.h

@@ -74,7 +74,7 @@ public:
 
   void operator() (const Field &src, Field &psi){
 
-    psi=Zero();
+    //    psi=Zero();
     RealD cp, ssq,rsq;
     ssq=norm2(src);
     rsq=Tolerance*Tolerance*ssq;

Grid/algorithms/multigrid/Aggregates.h

@@ -30,6 +30,8 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 /*  END LEGAL */
 #pragma once
 
+#include <Grid/algorithms/iterative/PrecGeneralisedConjugateResidualNonHermitian.h>
+
 NAMESPACE_BEGIN(Grid);
 
 inline RealD AggregatePowerLaw(RealD x)
@@ -95,7 +97,7 @@ public:
 
     RealD scale;
 
-    ConjugateGradient<FineField> CG(1.0e-2,100,false);
+    ConjugateGradient<FineField> CG(1.0e-3,400,false);
     FineField noise(FineGrid);
     FineField Mn(FineGrid);
 
@@ -108,7 +110,7 @@ public:
       
       hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise   ["<<b<<"] <n|MdagM|n> "<<norm2(Mn)<<std::endl;
 
-      for(int i=0;i<1;i++){
+      for(int i=0;i<4;i++){
 
 	CG(hermop,noise,subspace[b]);
 
@@ -124,6 +126,53 @@ public:
     }
   }
 
+  virtual void CreateSubspaceGCR(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &DiracOp,int nn=nbasis)
+  {
+    RealD scale;
+
+    TrivialPrecon<FineField> simple_fine;
+    PrecGeneralisedConjugateResidualNonHermitian<FineField> GCR(0.001,30,DiracOp,simple_fine,12,12);
+    FineField noise(FineGrid);
+    FineField src(FineGrid);
+    FineField guess(FineGrid);
+    FineField Mn(FineGrid);
+
+    for(int b=0;b<nn;b++){
+      
+      subspace[b] = Zero();
+      gaussian(RNG,noise);
+      scale = std::pow(norm2(noise),-0.5); 
+      noise=noise*scale;
+      
+      DiracOp.Op(noise,Mn); std::cout<<GridLogMessage << "noise   ["<<b<<"] <n|Op|n> "<<innerProduct(noise,Mn)<<std::endl;
+
+      for(int i=0;i<2;i++){
+	//  void operator() (const Field &src, Field &psi){
+#if 1
+	std::cout << GridLogMessage << " inverting on noise "<<std::endl;
+	src = noise;
+	guess=Zero();
+	GCR(src,guess);
+	subspace[b] = guess;
+#else
+	std::cout << GridLogMessage << " inverting on zero "<<std::endl;
+	src=Zero();
+	guess = noise;
+	GCR(src,guess);
+	subspace[b] = guess;
+#endif
+	noise = subspace[b];
+	scale = std::pow(norm2(noise),-0.5); 
+	noise=noise*scale;
+
+      }
+
+      DiracOp.Op(noise,Mn); std::cout<<GridLogMessage << "filtered["<<b<<"] <f|Op|f> "<<innerProduct(noise,Mn)<<std::endl;
+      subspace[b]   = noise;
+
+    }
+  }
+
   ////////////////////////////////////////////////////////////////////////////////////////////////
   // World of possibilities here. But have tried quite a lot of experiments (250+ jobs run on Summit)
   // and this is the best I found
@@ -160,14 +209,21 @@ public:
 
     int b =0;
     {
+      ComplexD ip;
       // Filter
       Chebyshev<FineField> Cheb(lo,hi,orderfilter);
       Cheb(hermop,noise,Mn);
       // normalise
       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale;
       subspace[b]   = Mn;
-      hermop.Op(Mn,tmp); 
+
-      std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
+      hermop.Op(Mn,tmp);
+      ip= innerProduct(Mn,tmp); 
+      std::cout<<GridLogMessage << "filt ["<<b<<"] <n|Op|n> "<<norm2(tmp)<<" "<<ip<<std::endl;
+
+      hermop.AdjOp(Mn,tmp); 
+      ip = innerProduct(Mn,tmp); 
+      std::cout<<GridLogMessage << "filt ["<<b<<"] <n|AdjOp|n> "<<norm2(tmp)<<" "<<ip<<std::endl;
       b++;
     }
 
@@ -213,8 +269,18 @@ public:
 	  Mn=*Tnp;
 	  scale = std::pow(norm2(Mn),-0.5);         Mn=Mn*scale;
 	  subspace[b] = Mn;
-	  hermop.Op(Mn,tmp); 
+
-	  std::cout<<GridLogMessage << n<<" filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl;
+
+	  ComplexD ip;
+
+	  hermop.Op(Mn,tmp);
+	  ip= innerProduct(Mn,tmp); 
+	  std::cout<<GridLogMessage << "filt ["<<b<<"] <n|Op|n> "<<norm2(tmp)<<" "<<ip<<std::endl;
+
+	  hermop.AdjOp(Mn,tmp); 
+	  ip = innerProduct(Mn,tmp); 
+	  std::cout<<GridLogMessage << "filt ["<<b<<"] <n|AdjOp|n> "<<norm2(tmp)<<" "<<ip<<std::endl;
+	  
 	  b++;
 	}
 

Grid/algorithms/multigrid/CoarsenedMatrix.h

@@ -99,7 +99,7 @@ public:
   CoarseMatrix AselfInvEven;
   CoarseMatrix AselfInvOdd;
 
-  Vector<RealD> dag_factor;
+  deviceVector<RealD> dag_factor;
 
   ///////////////////////
   // Interface
@@ -124,9 +124,13 @@ public:
     int npoint = geom.npoint;
     typedef LatticeView<Cobj> Aview;
       
-    Vector<Aview> AcceleratorViewContainer;
+    deviceVector<Aview> AcceleratorViewContainer(geom.npoint);
+    hostVector<Aview>   hAcceleratorViewContainer(geom.npoint);
   
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer.push_back(A[p].View(AcceleratorRead));
+    for(int p=0;p<geom.npoint;p++) {
+      hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead);
+      acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]);
+    }
     Aview *Aview_p = & AcceleratorViewContainer[0];
 
     const int Nsimd = CComplex::Nsimd();
@@ -161,7 +165,7 @@ public:
       coalescedWrite(out_v[ss](b),res);
       });
 
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer[p].ViewClose();
+    for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose();
   };
 
   void Mdag (const CoarseVector &in, CoarseVector &out)
@@ -190,9 +194,14 @@ public:
     int npoint = geom.npoint;
     typedef LatticeView<Cobj> Aview;
 
-    Vector<Aview> AcceleratorViewContainer;
 
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer.push_back(A[p].View(AcceleratorRead));
+    deviceVector<Aview> AcceleratorViewContainer(geom.npoint);
+    hostVector<Aview>   hAcceleratorViewContainer(geom.npoint);
+  
+    for(int p=0;p<geom.npoint;p++) {
+      hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead);
+      acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]);
+    }
     Aview *Aview_p = & AcceleratorViewContainer[0];
 
     const int Nsimd = CComplex::Nsimd();
@@ -201,10 +210,10 @@ public:
 
     int osites=Grid()->oSites();
 
-    Vector<int> points(geom.npoint, 0);
+    deviceVector<int> points(geom.npoint);
-    for(int p=0; p<geom.npoint; p++)
+    for(int p=0; p<geom.npoint; p++) { 
-      points[p] = geom.points_dagger[p];
+      acceleratorPut(points[p],geom.points_dagger[p]);
-
+    }
     auto points_p = &points[0];
 
     RealD* dag_factor_p = &dag_factor[0];
@@ -236,7 +245,7 @@ public:
       coalescedWrite(out_v[ss](b),res);
       });
 
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer[p].ViewClose();
+    for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose();
   }
 
   void MdirComms(const CoarseVector &in)
@@ -251,8 +260,14 @@ public:
     out.Checkerboard() = in.Checkerboard();
 
     typedef LatticeView<Cobj> Aview;
-    Vector<Aview> AcceleratorViewContainer;
+
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer.push_back(A[p].View(AcceleratorRead));
+    deviceVector<Aview> AcceleratorViewContainer(geom.npoint);
+    hostVector<Aview>   hAcceleratorViewContainer(geom.npoint);
+  
+    for(int p=0;p<geom.npoint;p++) {
+      hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead);
+      acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]);
+    }
     Aview *Aview_p = & AcceleratorViewContainer[0];
 
     autoView( out_v , out, AcceleratorWrite);
@@ -285,7 +300,7 @@ public:
       }
       coalescedWrite(out_v[ss](b),res);
     });
-    for(int p=0;p<geom.npoint;p++) AcceleratorViewContainer[p].ViewClose();
+    for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose();
   }
   void MdirAll(const CoarseVector &in,std::vector<CoarseVector> &out)
   {
@@ -469,14 +484,20 @@ public:
 
     // determine in what order we need the points
     int npoint = geom.npoint-1;
-    Vector<int> points(npoint, 0);
+    deviceVector<int> points(npoint);
-    for(int p=0; p<npoint; p++)
+    for(int p=0; p<npoint; p++) {
-      points[p] = (dag && !hermitian) ? geom.points_dagger[p] : p;
+      int val = (dag && !hermitian) ? geom.points_dagger[p] : p;
-
+      acceleratorPut(points[p], val);
+    }
     auto points_p = &points[0];
 
-    Vector<Aview> AcceleratorViewContainer;
+    deviceVector<Aview> AcceleratorViewContainer(geom.npoint);
-    for(int p=0;p<npoint;p++) AcceleratorViewContainer.push_back(a[p].View(AcceleratorRead));
+    hostVector<Aview>   hAcceleratorViewContainer(geom.npoint);
+  
+    for(int p=0;p<geom.npoint;p++) {
+      hAcceleratorViewContainer[p] = a[p].View(AcceleratorRead);
+      acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]);
+    }
     Aview *Aview_p = & AcceleratorViewContainer[0];
 
     const int Nsimd = CComplex::Nsimd();
@@ -539,7 +560,7 @@ public:
       });
     }
 
-    for(int p=0;p<npoint;p++) AcceleratorViewContainer[p].ViewClose();
+    for(int p=0;p<npoint;p++) hAcceleratorViewContainer[p].ViewClose();
   }
   
   CoarsenedMatrix(GridCartesian &CoarseGrid, int hermitian_=0) 	:
@@ -590,11 +611,13 @@ public:
     }
 
     // GPU readable prefactor
+    std::vector<RealD> h_dag_factor(nbasis*nbasis);
     thread_for(i, nbasis*nbasis, {
       int j = i/nbasis;
       int k = i%nbasis;
-      dag_factor[i] = dag_factor_eigen(j, k);
+      h_dag_factor[i] = dag_factor_eigen(j, k);
     });
+    acceleratorCopyToDevice(&h_dag_factor[0],&dag_factor[0],dag_factor.size()*sizeof(RealD));
   }
 
   void CoarsenOperator(GridBase *FineGrid,LinearOperatorBase<Lattice<Fobj> > &linop,

Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h

@@ -441,8 +441,20 @@ public:
     std::cout << GridLogMessage<<"CoarsenOperator inv    "<<tinv<<" us"<<std::endl;
   }
 #else
+  //////////////////////////////////////////////////////////////////////
+  // Galerkin projection of matrix
+  //////////////////////////////////////////////////////////////////////
   void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop,
 		       Aggregation<Fobj,CComplex,nbasis> & Subspace)
+  {
+    CoarsenOperator(linop,Subspace,Subspace);
+  }
+  //////////////////////////////////////////////////////////////////////
+  // Petrov - Galerkin projection of matrix
+  //////////////////////////////////////////////////////////////////////
+  void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop,
+		       Aggregation<Fobj,CComplex,nbasis> & U,
+		       Aggregation<Fobj,CComplex,nbasis> & V)
   {
     std::cout << GridLogMessage<< "GeneralCoarsenMatrix "<< std::endl;
     GridBase *grid = FineGrid();
@@ -458,11 +470,9 @@ public:
     // Orthogonalise the subblocks over the basis
     /////////////////////////////////////////////////////////////
     CoarseScalar InnerProd(CoarseGrid()); 
-    blockOrthogonalise(InnerProd,Subspace.subspace);
+    blockOrthogonalise(InnerProd,V.subspace);
+    blockOrthogonalise(InnerProd,U.subspace);
 
-    //    for(int s=0;s<Subspace.subspace.size();s++){
-      //      std::cout << " subspace norm "<<norm2(Subspace.subspace[s])<<std::endl;
-    //    }
     const int npoint = geom.npoint;
       
     Coordinate clatt = CoarseGrid()->GlobalDimensions();
@@ -542,7 +552,7 @@ public:
       std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl;
       for(int p=0;p<npoint;p++){ // Loop over momenta in npoint
 	tphaseBZ-=usecond();
-	phaV = phaF[p]*Subspace.subspace[i];
+	phaV = phaF[p]*V.subspace[i];
 	tphaseBZ+=usecond();
 
 	/////////////////////////////////////////////////////////////////////
@@ -555,7 +565,7 @@ public:
 	//	std::cout << i << " " <<p << " MphaV "<<norm2(MphaV)<<" "<<norm2(phaV)<<std::endl;
 
 	tproj-=usecond();
-	blockProject(coarseInner,MphaV,Subspace.subspace);
+	blockProject(coarseInner,MphaV,U.subspace);
 	coarseInner = conjugate(pha[p]) * coarseInner;
 
 	ComputeProj[p] = coarseInner;

Grid/allocator/AlignedAllocator.h

@@ -69,7 +69,7 @@ public:
   }
 
   // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop
-  void construct(pointer __p, const _Tp& __val) { assert(0);};
+  void construct(pointer __p, const _Tp& __val) { };
   void construct(pointer __p) { };
   void destroy(pointer __p) { };
 };
@@ -174,19 +174,10 @@ template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const d
 ////////////////////////////////////////////////////////////////////////////////
 // Template typedefs
 ////////////////////////////////////////////////////////////////////////////////
-#ifdef ACCELERATOR_CSHIFT
+template<class T> using hostVector          = std::vector<T,alignedAllocator<T> >;           // Needs autoview
-// Cshift on device
+template<class T> using Vector              = std::vector<T,uvmAllocator<T> >;               // Really want to deprecate
-template<class T> using cshiftAllocator = devAllocator<T>;
+template<class T> using uvmVector           = std::vector<T,uvmAllocator<T> >;               // auto migrating page
-#else
+template<class T> using deviceVector        = std::vector<T,devAllocator<T> >;               // device vector
-// Cshift on host
-template<class T> using cshiftAllocator = std::allocator<T>;
-#endif
-
-template<class T> using Vector        = std::vector<T,uvmAllocator<T> >;           
-template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;           
-template<class T> using commVector    = std::vector<T,devAllocator<T> >;
-template<class T> using deviceVector  = std::vector<T,devAllocator<T> >;
-template<class T> using cshiftVector  = std::vector<T,cshiftAllocator<T> >;
 
 /*
 template<class T> class vecView
@@ -197,8 +188,9 @@ template<class T> class vecView
   ViewMode mode;
   void * cpu_ptr;
  public:
+  // Rvalue accessor
   accelerator_inline T & operator[](size_t i) const { return this->data[i]; };
-  vecView(std::vector<T> &refer_to_me,ViewMode _mode)
+  vecView(Vector<T> &refer_to_me,ViewMode _mode)
   {
     cpu_ptr = &refer_to_me[0];
     size = refer_to_me.size();
@@ -214,22 +206,12 @@ template<class T> class vecView
   }
 };
 
-template<class T> vecView<T> VectorView(std::vector<T> &vec,ViewMode _mode)
+template<class T> vecView<T> VectorView(Vector<T> &vec,ViewMode _mode)
 {
   vecView<T> ret(vec,_mode); // does the open
   return ret;                // must be closed
 }
 
-// Little autoscope assister
-template<class View> 
-class VectorViewCloser
-{
-  View v;  // Take a copy of view and call view close when I go out of scope automatically
- public:
-  VectorViewCloser(View &_v) : v(_v) {};
-  ~VectorViewCloser() { auto ptr = v.cpu_ptr; v.ViewClose();  MemoryManager::NotifyDeletion(ptr);}
-};
-
 #define autoVecView(v_v,v,mode)					\
   auto v_v = VectorView(v,mode);				\
   ViewCloser<decltype(v_v)> _autoView##v_v(v_v);

Grid/allocator/MemoryManagerCache.cc

@@ -1,16 +1,15 @@
 #include <Grid/GridCore.h>
 #ifndef GRID_UVM
 
-#warning "Using explicit device memory copies"
 NAMESPACE_BEGIN(Grid);
 
 #define MAXLINE 512
 static char print_buffer [ MAXLINE ];
 
-#define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer;
+#define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer << std::endl;
-#define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogDebug << print_buffer;
+#define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogDebug  << print_buffer << std::endl;
 //#define dprintf(...) 
-
+//#define mprintf(...) 
 
 ////////////////////////////////////////////////////////////
 // For caching copies of data on device
@@ -111,7 +110,7 @@ void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
   ///////////////////////////////////////////////////////////
   assert(AccCache.state!=Empty);
   
-  dprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
+  dprintf("MemoryManager: Discard(%lx) %lx",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
   assert(AccCache.accLock==0);
   assert(AccCache.cpuLock==0);
   assert(AccCache.CpuPtr!=(uint64_t)NULL);
@@ -121,7 +120,7 @@ void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
     DeviceBytes   -=AccCache.bytes;
     LRUremove(AccCache);
     AccCache.AccPtr=(uint64_t) NULL;
-    dprintf("MemoryManager: Free(%lx) LRU %ld Total %ld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);  
+    dprintf("MemoryManager: Free(%lx) LRU %ld Total %ld",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);  
   }
   uint64_t CpuPtr = AccCache.CpuPtr;
   EntryErase(CpuPtr);
@@ -141,7 +140,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
   ///////////////////////////////////////////////////////////////////////////
   assert(AccCache.state!=Empty);
   
-  mprintf("MemoryManager: Evict CpuPtr %lx AccPtr %lx cpuLock %ld accLock %ld\n",
+  mprintf("MemoryManager: Evict CpuPtr %lx AccPtr %lx cpuLock %ld accLock %ld",
 	  (uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr,
 	  (uint64_t)AccCache.cpuLock,(uint64_t)AccCache.accLock); 
   if (AccCache.accLock!=0) return;
@@ -155,7 +154,7 @@ void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
     AccCache.AccPtr=(uint64_t)NULL;
     AccCache.state=CpuDirty; // CPU primary now
     DeviceBytes   -=AccCache.bytes;
-    dprintf("MemoryManager: Free(AccPtr %lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);  
+    dprintf("MemoryManager: Free(AccPtr %lx) footprint now %ld ",(uint64_t)AccCache.AccPtr,DeviceBytes);  
   }
   //  uint64_t CpuPtr = AccCache.CpuPtr;
   DeviceEvictions++;
@@ -169,7 +168,7 @@ void MemoryManager::Flush(AcceleratorViewEntry &AccCache)
   assert(AccCache.AccPtr!=(uint64_t)NULL);
   assert(AccCache.CpuPtr!=(uint64_t)NULL);
   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
-  mprintf("MemoryManager: acceleratorCopyFromDevice Flush AccPtr %lx -> CpuPtr %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
+  mprintf("MemoryManager: acceleratorCopyFromDevice Flush size %ld AccPtr %lx -> CpuPtr %lx",(uint64_t)AccCache.bytes,(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
   DeviceToHostBytes+=AccCache.bytes;
   DeviceToHostXfer++;
   AccCache.state=Consistent;
@@ -184,7 +183,9 @@ void MemoryManager::Clone(AcceleratorViewEntry &AccCache)
     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
     DeviceBytes+=AccCache.bytes;
   }
-  mprintf("MemoryManager: acceleratorCopyToDevice   Clone AccPtr %lx <- CpuPtr %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
+  mprintf("MemoryManager: acceleratorCopyToDevice   Clone size %ld AccPtr %lx <- CpuPtr %lx",
+	  (uint64_t)AccCache.bytes,
+	  (uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
   HostToDeviceBytes+=AccCache.bytes;
   HostToDeviceXfer++;
@@ -210,7 +211,7 @@ void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache)
 void MemoryManager::ViewClose(void* Ptr,ViewMode mode)
 {
   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
-    dprintf("AcceleratorViewClose %lx\n",(uint64_t)Ptr);
+    dprintf("AcceleratorViewClose %lx",(uint64_t)Ptr);
     AcceleratorViewClose((uint64_t)Ptr);
   } else if( (mode==CpuRead)||(mode==CpuWrite)){
     CpuViewClose((uint64_t)Ptr);
@@ -222,7 +223,7 @@ void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvis
 {
   uint64_t CpuPtr = (uint64_t)_CpuPtr;
   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
-    dprintf("AcceleratorViewOpen %lx\n",(uint64_t)CpuPtr);
+    dprintf("AcceleratorViewOpen %lx",(uint64_t)CpuPtr);
     return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint);
   } else if( (mode==CpuRead)||(mode==CpuWrite)){
     return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint);
@@ -233,6 +234,9 @@ void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvis
 }
 void  MemoryManager::EvictVictims(uint64_t bytes)
 {
+  if(bytes>=DeviceMaxBytes) {
+    printf("EvictVictims bytes %ld DeviceMaxBytes %ld\n",bytes,DeviceMaxBytes);
+  }
   assert(bytes<DeviceMaxBytes);
   while(bytes+DeviceLRUBytes > DeviceMaxBytes){
     if ( DeviceLRUBytes > 0){
@@ -265,7 +269,7 @@ uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMod
   assert(AccCache.cpuLock==0);  // Programming error
 
   if(AccCache.state!=Empty) {
-    dprintf("ViewOpen found entry %lx %lx : %ld %ld accLock %ld\n",
+    dprintf("ViewOpen found entry %lx %lx : sizes %ld %ld accLock %ld",
 		    (uint64_t)AccCache.CpuPtr,
 		    (uint64_t)CpuPtr,
 		    (uint64_t)AccCache.bytes,
@@ -305,7 +309,7 @@ uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMod
       AccCache.state  = Consistent; // Empty + AccRead => Consistent
     }
     AccCache.accLock= 1;
-    dprintf("Copied Empty entry into device accLock= %d\n",AccCache.accLock);
+    dprintf("Copied Empty entry into device accLock= %d",AccCache.accLock);
   } else if(AccCache.state==CpuDirty ){
     if(mode==AcceleratorWriteDiscard) {
       CpuDiscard(AccCache);
@@ -318,21 +322,21 @@ uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMod
       AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent
     }
     AccCache.accLock++;
-    dprintf("CpuDirty entry into device ++accLock= %d\n",AccCache.accLock);
+    dprintf("CpuDirty entry into device ++accLock= %d",AccCache.accLock);
   } else if(AccCache.state==Consistent) {
     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
       AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty
     else
       AccCache.state  = Consistent; // Consistent + AccRead => Consistent
     AccCache.accLock++;
-    dprintf("Consistent entry into device ++accLock= %d\n",AccCache.accLock);
+    dprintf("Consistent entry into device ++accLock= %d",AccCache.accLock);
   } else if(AccCache.state==AccDirty) {
     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
       AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty
     else
       AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty
     AccCache.accLock++;
-    dprintf("AccDirty entry ++accLock= %d\n",AccCache.accLock);
+    dprintf("AccDirty entry ++accLock= %d",AccCache.accLock);
   } else {
     assert(0);
   }
@@ -341,7 +345,7 @@ uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMod
   // If view is opened on device must remove from LRU
   if(AccCache.LRU_valid==1){
     // must possibly remove from LRU as now locked on GPU
-    dprintf("AccCache entry removed from LRU \n");
+    dprintf("AccCache entry removed from LRU ");
     LRUremove(AccCache);
   }
 
@@ -364,10 +368,10 @@ void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr)
   AccCache.accLock--;
   // Move to LRU queue if not locked and close on device
   if(AccCache.accLock==0) {
-    dprintf("AccleratorViewClose %lx AccLock decremented to %ld move to LRU queue\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock);
+    dprintf("AccleratorViewClose %lx AccLock decremented to %ld move to LRU queue",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock);
     LRUinsert(AccCache);
   } else {
-    dprintf("AccleratorViewClose %lx AccLock decremented to %ld\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock);
+    dprintf("AccleratorViewClose %lx AccLock decremented to %ld",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock);
   }
 }
 void MemoryManager::CpuViewClose(uint64_t CpuPtr)

Grid/allocator/MemoryStats.cc

@@ -15,10 +15,10 @@ void check_huge_pages(void *Buf,uint64_t BYTES)
   uint64_t virt_pfn = (uint64_t)Buf / page_size;
   off_t offset = sizeof(uint64_t) * virt_pfn;
   uint64_t npages = (BYTES + page_size-1) / page_size;
-  uint64_t pagedata[npages];
+  std::vector<uint64_t> pagedata(npages);
   uint64_t ret = lseek(fd, offset, SEEK_SET);
   assert(ret == offset);
-  ret = ::read(fd, pagedata, sizeof(uint64_t)*npages);
+  ret = ::read(fd, &pagedata[0], sizeof(uint64_t)*npages);
   assert(ret == sizeof(uint64_t) * npages);
   int nhugepages = npages / 512;
   int n4ktotal, nnothuge;

Grid/communicator/Communicator_base.cc

@@ -57,18 +57,29 @@ int                      CartesianCommunicator::ProcessorCount(void)    { return
 // very VERY rarely (Log, serial RNG) we need world without a grid
 ////////////////////////////////////////////////////////////////////////////////
 
+#ifdef USE_GRID_REDUCTION
+void CartesianCommunicator::GlobalSum(ComplexF &c)
+{
+  GlobalSumP2P(c);
+}
+void CartesianCommunicator::GlobalSum(ComplexD &c)
+{
+  GlobalSumP2P(c);
+}
+#else
 void CartesianCommunicator::GlobalSum(ComplexF &c)
 {
   GlobalSumVector((float *)&c,2);
 }
-void CartesianCommunicator::GlobalSumVector(ComplexF *c,int N)
-{
-  GlobalSumVector((float *)c,2*N);
-}
 void CartesianCommunicator::GlobalSum(ComplexD &c)
 {
   GlobalSumVector((double *)&c,2);
 }
+#endif
+void CartesianCommunicator::GlobalSumVector(ComplexF *c,int N)
+{
+  GlobalSumVector((float *)c,2*N);
+}
 void CartesianCommunicator::GlobalSumVector(ComplexD *c,int N)
 {
   GlobalSumVector((double *)c,2*N);

Grid/communicator/Communicator_base.h

@@ -33,6 +33,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 ///////////////////////////////////
 #include <Grid/communicator/SharedMemory.h>
 
+#define NVLINK_GET
+
 NAMESPACE_BEGIN(Grid);
 
 extern bool Stencil_force_mpi ;
@@ -136,7 +138,7 @@ public:
     for(int d=0;d<_ndimension;d++){
       column.resize(_processors[d]);
       column[0] = accum;
-      std::vector<CommsRequest_t> list;
+      std::vector<MpiCommsRequest_t> list;
       for(int p=1;p<_processors[d];p++){
 	ShiftedRanks(d,p,source,dest);
 	SendToRecvFromBegin(list,
@@ -147,7 +149,8 @@ public:
 			    sizeof(obj),d*100+p);
 
       }
-      CommsComplete(list);
+      if (!list.empty()) // avoid triggering assert in comms == none
+	CommsComplete(list);
       for(int p=1;p<_processors[d];p++){
 	accum = accum + column[p];
       }
@@ -166,8 +169,8 @@ public:
   ////////////////////////////////////////////////////////////
   // Face exchange, buffer swap in translational invariant way
   ////////////////////////////////////////////////////////////
-  void CommsComplete(std::vector<CommsRequest_t> &list);
+  void CommsComplete(std::vector<MpiCommsRequest_t> &list);
-  void SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
+  void SendToRecvFromBegin(std::vector<MpiCommsRequest_t> &list,
 			   void *xmit,
 			   int dest,
 			   void *recv,
@@ -186,6 +189,17 @@ public:
 			       int recv_from_rank,int do_recv,
 			       int bytes,int dir);
 
+  double StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list,
+				      void *xmit,
+				      int xmit_to_rank,int do_xmit,
+				      void *recv,
+				      int recv_from_rank,int do_recv,
+				      int xbytes,int rbytes,int dir);
+
+  // Could do a PollHtoD and have a CommsMerge dependence
+  void StencilSendToRecvFromPollDtoH (std::vector<CommsRequest_t> &list);
+  void StencilSendToRecvFromPollIRecv(std::vector<CommsRequest_t> &list);
+
   double StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 				    void *xmit,
 				    int xmit_to_rank,int do_xmit,

Grid/communicator/Communicator_mpi3.cc

@@ -30,6 +30,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 
 NAMESPACE_BEGIN(Grid);
 
+
 Grid_MPI_Comm       CartesianCommunicator::communicator_world;
 
 ////////////////////////////////////////////
@@ -257,15 +258,41 @@ CartesianCommunicator::~CartesianCommunicator()
     }
   }
 }
+#ifdef USE_GRID_REDUCTION
+void CartesianCommunicator::GlobalSum(float &f){
+  FlightRecorder::StepLog("GlobalSumP2P");
+  CartesianCommunicator::GlobalSumP2P(f);
+}
+void CartesianCommunicator::GlobalSum(double &d)
+{
+  FlightRecorder::StepLog("GlobalSumP2P");
+  CartesianCommunicator::GlobalSumP2P(d);
+}
+#else
+void CartesianCommunicator::GlobalSum(float &f){
+  FlightRecorder::StepLog("AllReduce");
+  int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator);
+  assert(ierr==0);
+}
+void CartesianCommunicator::GlobalSum(double &d)
+{
+  FlightRecorder::StepLog("AllReduce");
+  int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_SUM,communicator);
+  assert(ierr==0);
+}
+#endif
 void CartesianCommunicator::GlobalSum(uint32_t &u){
+  FlightRecorder::StepLog("AllReduce");
   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_SUM,communicator);
   assert(ierr==0);
 }
 void CartesianCommunicator::GlobalSum(uint64_t &u){
+  FlightRecorder::StepLog("AllReduce");
   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator);
   assert(ierr==0);
 }
 void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){
+  FlightRecorder::StepLog("AllReduceVector");
   int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator);
   assert(ierr==0);
 }
@@ -287,27 +314,18 @@ void CartesianCommunicator::GlobalMax(double &d)
   int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_MAX,communicator);
   assert(ierr==0);
 }
-void CartesianCommunicator::GlobalSum(float &f){
-  int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator);
-  assert(ierr==0);
-}
 void CartesianCommunicator::GlobalSumVector(float *f,int N)
 {
   int ierr=MPI_Allreduce(MPI_IN_PLACE,f,N,MPI_FLOAT,MPI_SUM,communicator);
   assert(ierr==0);
 }
-void CartesianCommunicator::GlobalSum(double &d)
-{
-  int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_SUM,communicator);
-  assert(ierr==0);
-}
 void CartesianCommunicator::GlobalSumVector(double *d,int N)
 {
   int ierr = MPI_Allreduce(MPI_IN_PLACE,d,N,MPI_DOUBLE,MPI_SUM,communicator);
   assert(ierr==0);
 }
 
-void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
+void CartesianCommunicator::SendToRecvFromBegin(std::vector<MpiCommsRequest_t> &list,
 						void *xmit,
 						int dest,
 						void *recv,
@@ -332,7 +350,7 @@ void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &lis
   assert(ierr==0);
   list.push_back(xrq);
 }
-void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list)
+void CartesianCommunicator::CommsComplete(std::vector<MpiCommsRequest_t> &list)
 {
   int nreq=list.size();
 
@@ -351,9 +369,7 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
 					   int from,
 					   int bytes)
 {
-  std::vector<CommsRequest_t> reqs(0);
+  std::vector<MpiCommsRequest_t> reqs(0);
-  unsigned long  xcrc = crc32(0L, Z_NULL, 0);
-  unsigned long  rcrc = crc32(0L, Z_NULL, 0);
 
   int myrank = _processor;
   int ierr;
@@ -369,9 +385,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
 		    communicator,MPI_STATUS_IGNORE);
   assert(ierr==0);
 
-  //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes);
-  //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
-  //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush
 }
 // Basic Halo comms primitive
 double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
@@ -381,12 +394,287 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
 						     int bytes,int dir)
 {
   std::vector<CommsRequest_t> list;
-  double offbytes = StencilSendToRecvFromBegin(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir);
+  double offbytes = StencilSendToRecvFromPrepare(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir);
+  offbytes       += StencilSendToRecvFromBegin(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir);
   StencilSendToRecvFromComplete(list,dir);
   return offbytes;
 }
 
-#undef NVLINK_GET // Define to use get instead of put DMA
+
+#ifdef ACCELERATOR_AWARE_MPI
+void CartesianCommunicator::StencilSendToRecvFromPollIRecv(std::vector<CommsRequest_t> &list) {};
+void CartesianCommunicator::StencilSendToRecvFromPollDtoH(std::vector<CommsRequest_t> &list) {};
+double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list,
+							   void *xmit,
+							   int dest,int dox,
+							   void *recv,
+							   int from,int dor,
+							   int xbytes,int rbytes,int dir)
+{
+  return 0.0; // Do nothing -- no preparation required
+}
+double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
+							 void *xmit,
+							 int dest,int dox,
+							 void *recv,
+							 int from,int dor,
+							 int xbytes,int rbytes,int dir)
+{
+  int ncomm  =communicator_halo.size();
+  int commdir=dir%ncomm;
+
+  MPI_Request xrq;
+  MPI_Request rrq;
+
+  int ierr;
+  int gdest = ShmRanks[dest];
+  int gfrom = ShmRanks[from];
+  int gme   = ShmRanks[_processor];
+
+  assert(dest != _processor);
+  assert(from != _processor);
+  assert(gme  == ShmRank);
+  double off_node_bytes=0.0;
+  int tag;
+  
+  if ( dor ) {
+    if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) {
+      tag= dir+from*32;
+      ierr=MPI_Irecv(recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq);
+      assert(ierr==0);
+      list.push_back(rrq);
+      off_node_bytes+=rbytes;
+    }
+#ifdef NVLINK_GET
+    else { 
+      void *shm = (void *) this->ShmBufferTranslate(from,xmit);
+      assert(shm!=NULL);
+      acceleratorCopyDeviceToDeviceAsynch(shm,recv,rbytes);
+    }
+#endif
+  }
+  // This is a NVLINK PUT  
+  if (dox) {
+    if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) {
+      tag= dir+_processor*32;
+      ierr =MPI_Isend(xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
+      assert(ierr==0);
+      list.push_back(xrq);
+      off_node_bytes+=xbytes;
+    } else {
+#ifndef NVLINK_GET
+      void *shm = (void *) this->ShmBufferTranslate(dest,recv);
+      assert(shm!=NULL);
+      acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes);
+#endif
+    }
+  }
+  return off_node_bytes;
+}
+
+void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir)
+{
+  int nreq=list.size();
+  /*finishes Get/Put*/
+  acceleratorCopySynchronise();
+
+  if (nreq==0) return;
+  std::vector<MPI_Status> status(nreq);
+  int ierr = MPI_Waitall(nreq,&list[0],&status[0]);
+  assert(ierr==0);
+  list.resize(0);
+  this->StencilBarrier(); 
+}
+
+#else /* NOT     ... ACCELERATOR_AWARE_MPI */
+///////////////////////////////////////////
+// Pipeline mode through host memory
+///////////////////////////////////////////
+  /*
+   * In prepare (phase 1):
+   * PHASE 1: (prepare)
+   * - post MPI receive buffers asynch
+   * - post device - host send buffer transfer asynch
+   * PHASE 2: (Begin)
+   * - complete all copies
+   * - post MPI send asynch
+   * - post device - device transfers
+   * PHASE 3: (Complete)
+   * - MPI_waitall
+   * - host-device transfers
+   *
+   *********************************
+   * NB could split this further:
+   *--------------------------------
+   * PHASE 1: (Prepare)
+   * - post MPI receive buffers asynch
+   * - post device - host send buffer transfer asynch
+   * PHASE 2: (BeginInterNode)
+   * - complete all copies 
+   * - post MPI send asynch
+   * PHASE 3: (BeginIntraNode)
+   * - post device - device transfers
+   * PHASE 4: (Complete)
+   * - MPI_waitall
+   * - host-device transfers asynch
+   * - (complete all copies) 
+   */
+double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list,
+							   void *xmit,
+							   int dest,int dox,
+							   void *recv,
+							   int from,int dor,
+							   int xbytes,int rbytes,int dir)
+{
+/*
+ * Bring sequence from Stencil.h down to lower level.
+ * Assume using XeLink is ok
+ */  
+  int ncomm  =communicator_halo.size();
+  int commdir=dir%ncomm;
+
+  MPI_Request xrq;
+  MPI_Request rrq;
+
+  int ierr;
+  int gdest = ShmRanks[dest];
+  int gfrom = ShmRanks[from];
+  int gme   = ShmRanks[_processor];
+
+  assert(dest != _processor);
+  assert(from != _processor);
+  assert(gme  == ShmRank);
+  double off_node_bytes=0.0;
+  int tag;
+
+  void * host_recv = NULL;
+  void * host_xmit = NULL;
+
+  /*
+   * PHASE 1: (Prepare)
+   * - post MPI receive buffers asynch
+   * - post device - host send buffer transfer asynch
+   */
+  
+  if ( dor ) {
+    if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) {
+      tag= dir+from*32;
+      host_recv = this->HostBufferMalloc(rbytes);
+      ierr=MPI_Irecv(host_recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq);
+      assert(ierr==0);
+      CommsRequest_t srq;
+      srq.PacketType = InterNodeRecv;
+      srq.bytes      = rbytes;
+      srq.req        = rrq;
+      srq.host_buf   = host_recv;
+      srq.device_buf = recv;
+      list.push_back(srq);
+      off_node_bytes+=rbytes;
+    }
+  }
+  
+  if (dox) {
+    if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) {
+
+      tag= dir+_processor*32;
+
+      host_xmit = this->HostBufferMalloc(xbytes);
+      CommsRequest_t srq;
+
+      srq.ev = acceleratorCopyFromDeviceAsynch(xmit, host_xmit,xbytes); // Make this Asynch
+      
+      //      ierr =MPI_Isend(host_xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
+      //      assert(ierr==0);
+      //      off_node_bytes+=xbytes;
+
+      srq.PacketType = InterNodeXmit;
+      srq.bytes      = xbytes;
+      //      srq.req        = xrq;
+      srq.host_buf   = host_xmit;
+      srq.device_buf = xmit;
+      srq.tag        = tag;
+      srq.dest       = dest;
+      srq.commdir    = commdir;
+      list.push_back(srq);
+    }
+  }
+
+  return off_node_bytes;
+}
+/*
+ * In the interest of better pipelining, poll for completion on each DtoH and 
+ * start MPI_ISend in the meantime
+ */
+void CartesianCommunicator::StencilSendToRecvFromPollIRecv(std::vector<CommsRequest_t> &list)
+{
+  int pending = 0;
+  do {
+
+    pending = 0;
+
+    for(int idx = 0; idx<list.size();idx++){
+
+      if ( list[idx].PacketType==InterNodeRecv ) {
+
+	int flag = 0;
+	MPI_Status status;
+	int ierr = MPI_Test(&list[idx].req,&flag,&status);
+	assert(ierr==0);
+
+	if ( flag ) {
+	  //	  std::cout << " PollIrecv "<<idx<<" flag "<<flag<<std::endl;
+	  acceleratorCopyToDeviceAsynch(list[idx].host_buf,list[idx].device_buf,list[idx].bytes);
+	  list[idx].PacketType=InterNodeReceiveHtoD;
+	} else {
+	  pending ++;
+	}
+      }
+    }
+    //    std::cout << " PollIrecv "<<pending<<" pending requests"<<std::endl;
+  } while ( pending );
+  
+}
+void CartesianCommunicator::StencilSendToRecvFromPollDtoH(std::vector<CommsRequest_t> &list)
+{
+  int pending = 0;
+  do {
+
+    pending = 0;
+
+    for(int idx = 0; idx<list.size();idx++){
+
+      if ( list[idx].PacketType==InterNodeXmit ) {
+
+	if ( acceleratorEventIsComplete(list[idx].ev) ) {
+
+	  void *host_xmit = list[idx].host_buf;
+	  uint32_t xbytes = list[idx].bytes;
+	  int dest        = list[idx].dest;
+	  int tag         = list[idx].tag;
+	  int commdir     = list[idx].commdir;
+	  ///////////////////
+	  // Send packet
+	  ///////////////////
+
+	  //	  std::cout << " DtoH is complete for index "<<idx<<" calling MPI_Isend "<<std::endl;
+	  
+	  MPI_Request xrq;
+	  int ierr =MPI_Isend(host_xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
+	  assert(ierr==0);
+
+	  list[idx].req        = xrq; // Update the MPI request in the list
+
+	  list[idx].PacketType=InterNodeXmitISend;
+
+	} else {
+	  // not done, so return to polling loop
+	  pending++;
+	}
+      }
+    }
+  } while (pending);
+}  
+
 double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 							 void *xmit,
 							 int dest,int dox,
@@ -411,56 +699,109 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
   double off_node_bytes=0.0;
   int tag;
 
-  if ( dor ) {
+  void * host_xmit = NULL;
-    if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) {
+
-      tag= dir+from*32;
+  ////////////////////////////////
-      ierr=MPI_Irecv(recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq);
+  // Receives already posted
-      assert(ierr==0);
+  // Copies already started
-      list.push_back(rrq);
+  ////////////////////////////////
-      off_node_bytes+=rbytes;
+  /*  
-    }
+   * PHASE 2: (Begin)
+   * - complete all copies
+   * - post MPI send asynch
+   */
 #ifdef NVLINK_GET
+  if ( dor ) {
+
+    if ( ! ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) ) {
+      // Intranode
       void *shm = (void *) this->ShmBufferTranslate(from,xmit);
       assert(shm!=NULL);
-      acceleratorCopyDeviceToDeviceAsynch(shm,recv,rbytes);
+
-#endif
+      CommsRequest_t srq;
-  }
+
-  
+      srq.ev = acceleratorCopyDeviceToDeviceAsynch(shm,recv,rbytes);
+
+      srq.PacketType = IntraNodeRecv;
+      srq.bytes      = xbytes;
+      //      srq.req        = xrq;
+      srq.host_buf   = NULL;
+      srq.device_buf = xmit;
+      srq.tag        = -1;
+      srq.dest       = dest;
+      srq.commdir    = dir;
+      list.push_back(srq);
+    }
+  }  
+#else
   if (dox) {
-    //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
+
-    if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) {
+    if ( !( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) ) {
-      tag= dir+_processor*32;
+      // Intranode
-      ierr =MPI_Isend(xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
-      assert(ierr==0);
-      list.push_back(xrq);
-      off_node_bytes+=xbytes;
-    } else {
-#ifndef NVLINK_GET
       void *shm = (void *) this->ShmBufferTranslate(dest,recv);
       assert(shm!=NULL);
-      acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes);
+
-#endif
+      CommsRequest_t srq;
+      
+      srq.ev = acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes);
+
+      srq.PacketType = IntraNodeXmit;
+      srq.bytes      = xbytes;
+      //      srq.req        = xrq;
+      srq.host_buf   = NULL;
+      srq.device_buf = xmit;
+      srq.tag        = -1;
+      srq.dest       = dest;
+      srq.commdir    = dir;
+      list.push_back(srq);
       
     }
   }
-
+#endif
   return off_node_bytes;
 }
 void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir)
 {
-  int nreq=list.size();
+  acceleratorCopySynchronise(); // Complete all pending copy transfers D2D
 
-  acceleratorCopySynchronise();
+  std::vector<MPI_Status> status;
+  std::vector<MPI_Request> MpiRequests;
+    
+  for(int r=0;r<list.size();r++){
+    // Must check each Send buf is clear to reuse
+    if ( list[r].PacketType == InterNodeXmitISend ) MpiRequests.push_back(list[r].req);
+    //    if ( list[r].PacketType == InterNodeRecv ) MpiRequests.push_back(list[r].req); // Already "Test" passed
+  }
 
-  if (nreq==0) return;
+  int nreq=MpiRequests.size();
 
-  std::vector<MPI_Status> status(nreq);
+  if (nreq>0) {
-  int ierr = MPI_Waitall(nreq,&list[0],&status[0]);
+    status.resize(MpiRequests.size());
-  assert(ierr==0);
+    int ierr = MPI_Waitall(MpiRequests.size(),&MpiRequests[0],&status[0]); // Sends are guaranteed in order. No harm in not completing.
-  list.resize(0);
+    assert(ierr==0);
+  }
+  
+  //  for(int r=0;r<nreq;r++){
+  //    if ( list[r].PacketType==InterNodeRecv ) {
+  //      acceleratorCopyToDeviceAsynch(list[r].host_buf,list[r].device_buf,list[r].bytes);
+  //    }
+  //  }
+  
+  
+  list.resize(0);               // Delete the list
+  this->HostBufferFreeAll();    // Clean up the buffer allocs
+#ifndef NVLINK_GET
+  this->StencilBarrier(); // if PUT must check our nbrs have filled our receive buffers.
+#endif   
 }
+#endif
+////////////////////////////////////////////
+// END PIPELINE MODE / NO CUDA AWARE MPI
+////////////////////////////////////////////
+
 void CartesianCommunicator::StencilBarrier(void)
 {
+  FlightRecorder::StepLog("NodeBarrier");
   MPI_Barrier  (ShmComm);
 }
 //void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
@@ -468,11 +809,13 @@ void CartesianCommunicator::StencilBarrier(void)
 //}
 void CartesianCommunicator::Barrier(void)
 {
+  FlightRecorder::StepLog("GridBarrier");
   int ierr = MPI_Barrier(communicator);
   assert(ierr==0);
 }
 void CartesianCommunicator::Broadcast(int root,void* data, int bytes)
 {
+  FlightRecorder::StepLog("Broadcast");
   int ierr=MPI_Bcast(data,
 		     bytes,
 		     MPI_BYTE,
@@ -491,6 +834,7 @@ void CartesianCommunicator::BarrierWorld(void){
 }
 void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes)
 {
+  FlightRecorder::StepLog("BroadcastWorld");
   int ierr= MPI_Bcast(data,
 		      bytes,
 		      MPI_BYTE,
@@ -513,6 +857,7 @@ void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,
 }
 void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t bytes)
 {
+  FlightRecorder::StepLog("AllToAll");
   // MPI is a pain and uses "int" arguments
   // 64*64*64*128*16 == 500Million elements of data.
   // When 24*4 bytes multiples get 50x 10^9 >>> 2x10^9 Y2K bug.

Grid/communicator/Communicator_none.cc

@@ -91,7 +91,7 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
 {
   assert(0);
 }
-void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list){ assert(0);}
+void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list){ assert(list.size()==0);}
 void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 						void *xmit,
 						int dest,
@@ -132,6 +132,17 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
 {
   return 2.0*bytes;
 }
+void CartesianCommunicator::StencilSendToRecvFromPollIRecv(std::vector<CommsRequest_t> &list) {};
+void CartesianCommunicator::StencilSendToRecvFromPollDtoH(std::vector<CommsRequest_t> &list) {};
+double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list,
+							   void *xmit,
+							   int xmit_to_rank,int dox,
+							   void *recv,
+							   int recv_from_rank,int dor,
+							   int xbytes,int rbytes, int dir)
+{
+  return 0.0;
+}
 double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 							 void *xmit,
 							 int xmit_to_rank,int dox,

Grid/communicator/SharedMemory.h

@@ -46,8 +46,40 @@ NAMESPACE_BEGIN(Grid);
 
 #if defined (GRID_COMMS_MPI3) 
 typedef MPI_Comm    Grid_MPI_Comm;
+typedef MPI_Request MpiCommsRequest_t;
+#ifdef ACCELERATOR_AWARE_MPI
 typedef MPI_Request CommsRequest_t;
+#else
+/*
+ * Enable state transitions as each packet flows.
+ */
+enum PacketType_t {
+  FaceGather,
+  InterNodeXmit,
+  InterNodeRecv,
+  IntraNodeXmit,
+  IntraNodeRecv,
+  InterNodeXmitISend,
+  InterNodeReceiveHtoD
+};
+/*
+ *Package arguments needed for various actions along packet flow
+ */
+typedef struct {
+  PacketType_t PacketType;
+  void *host_buf;
+  void *device_buf;
+  int dest;
+  int tag;
+  int commdir;
+  unsigned long bytes;
+  acceleratorEvent_t ev;
+  MpiCommsRequest_t req;
+} CommsRequest_t;
+#endif
+
 #else 
+typedef int MpiCommsRequest_t;
 typedef int CommsRequest_t;
 typedef int Grid_MPI_Comm;
 #endif
@@ -105,7 +137,7 @@ public:
   ///////////////////////////////////////////////////
   static void SharedMemoryAllocate(uint64_t bytes, int flags);
   static void SharedMemoryFree(void);
-  static void SharedMemoryCopy(void *dest,void *src,size_t bytes);
+  //  static void SharedMemoryCopy(void *dest,void *src,size_t bytes);
   static void SharedMemoryZero(void *dest,size_t bytes);
 
 };

Grid/communicator/SharedMemoryMPI.cc

@@ -42,6 +42,11 @@ Author: Christoph Lehner <christoph@lhnr.de>
 #ifdef ACCELERATOR_AWARE_MPI
 #define GRID_SYCL_LEVEL_ZERO_IPC
 #define SHM_SOCKETS
+#else
+#ifdef HAVE_NUMAIF_H
+  #warning " Using NUMAIF "
+#include <numaif.h>
+#endif 
 #endif 
 #include <syscall.h>
 #endif
@@ -537,7 +542,38 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
   // Each MPI rank should allocate our own buffer
   ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 #ifndef ACCELERATOR_AWARE_MPI
-  HostCommBuf= malloc(bytes);
+  // printf("Host buffer allocate for GPU non-aware MPI\n");
+#if 0
+  HostCommBuf= acceleratorAllocHost(bytes);
+#else 
+  HostCommBuf= malloc(bytes); /// CHANGE THIS TO malloc_host
+#if 0
+  #warning "Moving host buffers to specific NUMA domain"
+  int numa;
+  char *numa_name=(char *)getenv("MPI_BUF_NUMA");
+  if(numa_name) {
+    unsigned long page_size = sysconf(_SC_PAGESIZE);
+    numa = atoi(numa_name);
+    unsigned long page_count = bytes/page_size;
+    std::vector<void *> pages(page_count);
+    std::vector<int>    nodes(page_count,numa);
+    std::vector<int>    status(page_count,-1);
+    for(unsigned long p=0;p<page_count;p++){
+      pages[p] =(void *) ((uint64_t) HostCommBuf + p*page_size);
+    }
+    int ret = move_pages(0,
+			 page_count,
+			 &pages[0],
+			 &nodes[0],
+			 &status[0],
+			 MPOL_MF_MOVE);
+    printf("Host buffer move to numa domain %d : move_pages returned %d\n",numa,ret);
+    if (ret) perror(" move_pages failed for reason:");
+  }
+#endif  
+  acceleratorPin(HostCommBuf,bytes);
+#endif  
+
 #endif  
   ShmCommBuf = acceleratorAllocDevice(bytes);
   if (ShmCommBuf == (void *)NULL ) {
@@ -569,8 +605,8 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 #ifdef GRID_SYCL_LEVEL_ZERO_IPC
     typedef struct { int fd; pid_t pid ; ze_ipc_mem_handle_t ze; } clone_mem_t;
 
-    auto zeDevice    = cl::sycl::get_native<cl::sycl::backend::ext_oneapi_level_zero>(theGridAccelerator->get_device());
+    auto zeDevice    = sycl::get_native<sycl::backend::ext_oneapi_level_zero>(theGridAccelerator->get_device());
-    auto zeContext   = cl::sycl::get_native<cl::sycl::backend::ext_oneapi_level_zero>(theGridAccelerator->get_context());
+    auto zeContext   = sycl::get_native<sycl::backend::ext_oneapi_level_zero>(theGridAccelerator->get_context());
       
     ze_ipc_mem_handle_t ihandle;
     clone_mem_t handle;
@@ -880,14 +916,14 @@ void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
   bzero(dest,bytes);
 #endif
 }
-void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
+//void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
-{
+//{
-#if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL)
+//#if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL)
-  acceleratorCopyToDevice(src,dest,bytes);
+//  acceleratorCopyToDevice(src,dest,bytes);
-#else   
+//#else   
-  bcopy(src,dest,bytes);
+//  bcopy(src,dest,bytes);
-#endif
+//#endif
-}
+//}
 ////////////////////////////////////////////////////////
 // Global shared functionality finished
 // Now move to per communicator functionality
@@ -923,6 +959,7 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
     MPI_Allreduce(MPI_IN_PLACE,&wsr,1,MPI_UINT32_T,MPI_SUM,ShmComm);
 
     ShmCommBufs[r] = GlobalSharedMemory::WorldShmCommBufs[wsr];
+    //    std::cerr << " SetCommunicator rank "<<r<<" comm "<<ShmCommBufs[r] <<std::endl;
   }
   ShmBufferFreeAll();
 
@@ -953,7 +990,7 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
   }
 #endif
 
-  //SharedMemoryTest();
+  //  SharedMemoryTest();
 }
 //////////////////////////////////////////////////////////////////
 // On node barrier
@@ -975,19 +1012,18 @@ void SharedMemory::SharedMemoryTest(void)
        check[0]=GlobalSharedMemory::WorldNode;
        check[1]=r;
        check[2]=magic;
-       GlobalSharedMemory::SharedMemoryCopy( ShmCommBufs[r], check, 3*sizeof(uint64_t));
+       acceleratorCopyToDevice(check,ShmCommBufs[r],3*sizeof(uint64_t));
     }
   }
   ShmBarrier();
   for(uint64_t r=0;r<ShmSize;r++){
-    ShmBarrier();
+    acceleratorCopyFromDevice(ShmCommBufs[r],check,3*sizeof(uint64_t));
-    GlobalSharedMemory::SharedMemoryCopy(check,ShmCommBufs[r], 3*sizeof(uint64_t));
-    ShmBarrier();
     assert(check[0]==GlobalSharedMemory::WorldNode);
     assert(check[1]==r);
     assert(check[2]==magic);
-    ShmBarrier();
   }
+  ShmBarrier();
+  std::cout << GridLogDebug << " SharedMemoryTest has passed "<<std::endl;
 }
 
 void *SharedMemory::ShmBuffer(int rank)

Grid/communicator/SharedMemoryNone.cc

@@ -122,10 +122,10 @@ void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
 {
   acceleratorMemSet(dest,0,bytes);
 }
-void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
+//void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
-{
+//{
-  acceleratorCopyToDevice(src,dest,bytes);
+//  acceleratorCopyToDevice(src,dest,bytes);
-}
+//}
 ////////////////////////////////////////////////////////
 // Global shared functionality finished
 // Now move to per communicator functionality

Grid/cshift/Cshift.h

@@ -51,7 +51,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 #endif 
 
 NAMESPACE_BEGIN(Grid);
-
 template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 auto Cshift(const Expression &expr,int dim,int shift)  -> decltype(closure(expr)) 
 {

Grid/cshift/Cshift_common.h

@@ -30,12 +30,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 NAMESPACE_BEGIN(Grid);
 
 extern std::vector<std::pair<int,int> > Cshift_table; 
-extern commVector<std::pair<int,int> > Cshift_table_device; 
+extern deviceVector<std::pair<int,int> > Cshift_table_device; 
 
 inline std::pair<int,int> *MapCshiftTable(void)
 {
   // GPU version
-#ifdef ACCELERATOR_CSHIFT    
   uint64_t sz=Cshift_table.size();
   if (Cshift_table_device.size()!=sz )    {
     Cshift_table_device.resize(sz);
@@ -45,16 +44,13 @@ inline std::pair<int,int> *MapCshiftTable(void)
 			  sizeof(Cshift_table[0])*sz);
 
   return &Cshift_table_device[0];
-#else 
-  return &Cshift_table[0];
-#endif
   // CPU version use identify map
 }
 ///////////////////////////////////////////////////////////////////
 // Gather for when there is no need to SIMD split 
 ///////////////////////////////////////////////////////////////////
 template<class vobj> void 
-Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
+Gather_plane_simple (const Lattice<vobj> &rhs,deviceVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
 {
   int rd = rhs.Grid()->_rdimensions[dimension];
 
@@ -94,17 +90,10 @@ Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dim
   {
     auto buffer_p = & buffer[0];
     auto table = MapCshiftTable();
-#ifdef ACCELERATOR_CSHIFT
     autoView(rhs_v , rhs, AcceleratorRead);
     accelerator_for(i,ent,vobj::Nsimd(),{
 	coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second]));
     });
-#else
-    autoView(rhs_v , rhs, CpuRead);
-    thread_for(i,ent,{
-      buffer_p[table[i].first]=rhs_v[table[i].second];
-    });
-#endif
   }
 }
 
@@ -129,7 +118,6 @@ Gather_plane_extract(const Lattice<vobj> &rhs,
   int n1=rhs.Grid()->_slice_stride[dimension];
 
   if ( cbmask ==0x3){
-#ifdef ACCELERATOR_CSHIFT
     autoView(rhs_v , rhs, AcceleratorRead);
     accelerator_for(nn,e1*e2,1,{
 	int n = nn%e1;
@@ -140,21 +128,10 @@ Gather_plane_extract(const Lattice<vobj> &rhs,
 	vobj temp =rhs_v[so+o+b];
 	extract<vobj>(temp,pointers,offset);
       });
-#else
-    autoView(rhs_v , rhs, CpuRead);
-    thread_for2d(n,e1,b,e2,{
-	int o      =   n*n1;
-	int offset = b+n*e2;
-	
-	vobj temp =rhs_v[so+o+b];
-	extract<vobj>(temp,pointers,offset);
-      });
-#endif
   } else { 
     Coordinate rdim=rhs.Grid()->_rdimensions;
     Coordinate cdm =rhs.Grid()->_checker_dim_mask;
     std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb?
-#ifdef ACCELERATOR_CSHIFT    
     autoView(rhs_v , rhs, AcceleratorRead);
     accelerator_for(nn,e1*e2,1,{
 	int n = nn%e1;
@@ -175,33 +152,13 @@ Gather_plane_extract(const Lattice<vobj> &rhs,
 	  extract<vobj>(temp,pointers,offset);
 	}
       });
-#else
-    autoView(rhs_v , rhs, CpuRead);
-    thread_for2d(n,e1,b,e2,{
-
-	Coordinate coor;
-
-	int o=n*n1;
-	int oindex = o+b;
-
-       	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm);
-
-	int ocb=1<<cb;
-	int offset = b+n*e2;
-
-	if ( ocb & cbmask ) {
-	  vobj temp =rhs_v[so+o+b];
-	  extract<vobj>(temp,pointers,offset);
-	}
-      });
-#endif
   }
 }
 
 //////////////////////////////////////////////////////
 // Scatter for when there is no need to SIMD split
 //////////////////////////////////////////////////////
-template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask)
+template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,deviceVector<vobj> &buffer, int dimension,int plane,int cbmask)
 {
   int rd = rhs.Grid()->_rdimensions[dimension];
 
@@ -245,17 +202,10 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<
   {
     auto buffer_p = & buffer[0];
     auto table = MapCshiftTable();
-#ifdef ACCELERATOR_CSHIFT    
     autoView( rhs_v, rhs, AcceleratorWrite);
     accelerator_for(i,ent,vobj::Nsimd(),{
 	coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second]));
     });
-#else
-    autoView( rhs_v, rhs, CpuWrite);
-    thread_for(i,ent,{
-      rhs_v[table[i].first]=buffer_p[table[i].second];
-    });
-#endif
   }
 }
 
@@ -278,7 +228,6 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
   if(cbmask ==0x3 ) {
     int _slice_stride = rhs.Grid()->_slice_stride[dimension];
     int _slice_block = rhs.Grid()->_slice_block[dimension];
-#ifdef ACCELERATOR_CSHIFT    
     autoView( rhs_v , rhs, AcceleratorWrite);
     accelerator_for(nn,e1*e2,1,{
 	int n = nn%e1;
@@ -287,14 +236,6 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
 	int offset = b+n*_slice_block;
 	merge(rhs_v[so+o+b],pointers,offset);
       });
-#else
-    autoView( rhs_v , rhs, CpuWrite);
-    thread_for2d(n,e1,b,e2,{
-	int o      = n*_slice_stride;
-	int offset = b+n*_slice_block;
-	merge(rhs_v[so+o+b],pointers,offset);
-    });
-#endif
   } else { 
 
     // Case of SIMD split AND checker dim cannot currently be hit, except in 
@@ -360,19 +301,11 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs
 
   {
     auto table = MapCshiftTable();
-#ifdef ACCELERATOR_CSHIFT    
     autoView(rhs_v , rhs, AcceleratorRead);
     autoView(lhs_v , lhs, AcceleratorWrite);
     accelerator_for(i,ent,vobj::Nsimd(),{
       coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second]));
     });
-#else
-    autoView(rhs_v , rhs, CpuRead);
-    autoView(lhs_v , lhs, CpuWrite);
-    thread_for(i,ent,{
-      lhs_v[table[i].first]=rhs_v[table[i].second];
-    });
-#endif
   }
 }
 
@@ -412,19 +345,11 @@ template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vo
 
   {
     auto table = MapCshiftTable();
-#ifdef ACCELERATOR_CSHIFT    
     autoView( rhs_v, rhs, AcceleratorRead);
     autoView( lhs_v, lhs, AcceleratorWrite);
     accelerator_for(i,ent,1,{
       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
     });
-#else
-    autoView( rhs_v, rhs, CpuRead);
-    autoView( lhs_v, lhs, CpuWrite);
-    thread_for(i,ent,{
-      permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
-    });
-#endif
   }
 }
 

Grid/cshift/Cshift_mpi.h

@@ -31,7 +31,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 
 
 NAMESPACE_BEGIN(Grid); 
-
+const int Cshift_verbose=0;
 template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension,int shift)
 {
   typedef typename vobj::vector_type vector_type;
@@ -55,17 +55,17 @@ template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension
   RealD t1,t0;
   t0=usecond();
   if ( !comm_dim ) {
-    //std::cout << "CSHIFT: Cshift_local" <<std::endl;
+    //    std::cout << "CSHIFT: Cshift_local" <<std::endl;
     Cshift_local(ret,rhs,dimension,shift); // Handles checkerboarding
   } else if ( splice_dim ) {
-    //std::cout << "CSHIFT: Cshift_comms_simd call - splice_dim = " << splice_dim << " shift " << shift << " dimension = " << dimension << std::endl;
+    //    std::cout << "CSHIFT: Cshift_comms_simd call - splice_dim = " << splice_dim << " shift " << shift << " dimension = " << dimension << std::endl;
     Cshift_comms_simd(ret,rhs,dimension,shift);
   } else {
-    //std::cout << "CSHIFT: Cshift_comms" <<std::endl;
+    //    std::cout << "CSHIFT: Cshift_comms" <<std::endl;
     Cshift_comms(ret,rhs,dimension,shift);
   }
   t1=usecond();
-  //  std::cout << GridLogPerformance << "Cshift took "<< (t1-t0)/1e3 << " ms"<<std::endl;
+  if(Cshift_verbose) std::cout << GridLogPerformance << "Cshift took "<< (t1-t0)/1e3 << " ms"<<std::endl;
   return ret;
 }
 
@@ -94,18 +94,16 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob
   sshift[0] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Even);
   sshift[1] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Odd);
 
-  //std::cout << "Cshift_comms_simd dim "<<dimension<<"cb "<<rhs.checkerboard<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl;
+  //  std::cout << "Cshift_comms_simd dim "<<dimension<<"cb "<<rhs.Checkerboard()<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl;
   if ( sshift[0] == sshift[1] ) {
-    //std::cout << "Single pass Cshift_comms" <<std::endl;
+    //    std::cout << "Single pass Cshift_comms" <<std::endl;
     Cshift_comms_simd(ret,rhs,dimension,shift,0x3);
   } else {
-    //std::cout << "Two pass Cshift_comms" <<std::endl;
+    //    std::cout << "Two pass Cshift_comms" <<std::endl;
     Cshift_comms_simd(ret,rhs,dimension,shift,0x1);// if checkerboard is unfavourable take two passes
     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration
   }
 }
-#define ACCELERATOR_CSHIFT_NO_COPY
-#ifdef ACCELERATOR_CSHIFT_NO_COPY
 template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
 {
   typedef typename vobj::vector_type vector_type;
@@ -125,9 +123,13 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
   assert(shift<fd);
   
   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
-  static cshiftVector<vobj> send_buf; send_buf.resize(buffer_size);
+  static deviceVector<vobj> send_buf; send_buf.resize(buffer_size);
-  static cshiftVector<vobj> recv_buf; recv_buf.resize(buffer_size);
+  static deviceVector<vobj> recv_buf; recv_buf.resize(buffer_size);
-    
+#ifndef ACCELERATOR_AWARE_MPI
+  static hostVector<vobj> hsend_buf; hsend_buf.resize(buffer_size);
+  static hostVector<vobj> hrecv_buf; hrecv_buf.resize(buffer_size);
+#endif
+  
   int cb= (cbmask==0x2)? Odd : Even;
   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
   RealD tcopy=0.0;
@@ -158,18 +160,31 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
       //      int rank           = grid->_processor;
       int recv_from_rank;
       int xmit_to_rank;
+
       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
       
       tcomms-=usecond();
-      //      grid->Barrier();
+      grid->Barrier();
 
+#ifdef ACCELERATOR_AWARE_MPI
       grid->SendToRecvFrom((void *)&send_buf[0],
 			   xmit_to_rank,
 			   (void *)&recv_buf[0],
 			   recv_from_rank,
 			   bytes);
+#else
+      // bouncy bouncy
+      acceleratorCopyFromDevice(&send_buf[0],&hsend_buf[0],bytes);
+      grid->SendToRecvFrom((void *)&hsend_buf[0],
+			   xmit_to_rank,
+			   (void *)&hrecv_buf[0],
+			   recv_from_rank,
+			   bytes);
+      acceleratorCopyToDevice(&hrecv_buf[0],&recv_buf[0],bytes);
+#endif
+
       xbytes+=bytes;
-      //      grid->Barrier();
+      grid->Barrier();
       tcomms+=usecond();
 
       tscatter-=usecond();
@@ -177,13 +192,13 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
       tscatter+=usecond();
     }
   }
-  /*
+  if (Cshift_verbose){
-  std::cout << GridLogPerformance << " Cshift copy    "<<tcopy/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift copy    "<<tcopy/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift gather  "<<tgather/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift gather  "<<tgather/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift scatter "<<tscatter/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift scatter "<<tscatter/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift comm    "<<tcomms/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift comm    "<<tcomms/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s "<<2*xbytes<< " Bytes "<<std::endl;
+    std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s "<<2*xbytes<< " Bytes "<<std::endl;
-  */
+  }
 }
 
 template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
@@ -201,9 +216,9 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
   int simd_layout     = grid->_simd_layout[dimension];
   int comm_dim        = grid->_processors[dimension] >1 ;
 
-  //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd
+  //  std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd
-  //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout 
+  //	    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout 
-  //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl;
+  //	    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl;
 
   assert(comm_dim==1);
   assert(simd_layout==2);
@@ -224,16 +239,20 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
   //  int words = sizeof(vobj)/sizeof(vector_type);
 
-  static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd);
+  static std::vector<deviceVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd);
-  static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd);
+  static std::vector<deviceVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd);
   scalar_object *  recv_buf_extract_mpi;
   scalar_object *  send_buf_extract_mpi;
- 
+
   for(int s=0;s<Nsimd;s++){
     send_buf_extract[s].resize(buffer_size);
     recv_buf_extract[s].resize(buffer_size);
   }
-
+#ifndef ACCELERATOR_AWARE_MPI
+  hostVector<scalar_object> hsend_buf; hsend_buf.resize(buffer_size);
+  hostVector<scalar_object> hrecv_buf; hrecv_buf.resize(buffer_size);
+#endif
+  
   int bytes = buffer_size*sizeof(scalar_object);
 
   ExtractPointerArray<scalar_object>  pointers(Nsimd); // 
@@ -281,266 +300,50 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank); 
 
 	tcomms-=usecond();
-	//	grid->Barrier();
+	grid->Barrier();
 
 	send_buf_extract_mpi = &send_buf_extract[nbr_lane][0];
 	recv_buf_extract_mpi = &recv_buf_extract[i][0];
+#ifdef ACCELERATOR_AWARE_MPI
 	grid->SendToRecvFrom((void *)send_buf_extract_mpi,
 			     xmit_to_rank,
 			     (void *)recv_buf_extract_mpi,
 			     recv_from_rank,
 			     bytes);
-
+#else
-	xbytes+=bytes;
+      // bouncy bouncy
-	//	grid->Barrier();
+	acceleratorCopyFromDevice((void *)send_buf_extract_mpi,(void *)&hsend_buf[0],bytes);
-	tcomms+=usecond();
+	grid->SendToRecvFrom((void *)&hsend_buf[0],
-
-	rpointers[i] = &recv_buf_extract[i][0];
-      } else { 
-	rpointers[i] = &send_buf_extract[nbr_lane][0];
-      }
-
-    }
-    tscatter-=usecond();
-    Scatter_plane_merge(ret,rpointers,dimension,x,cbmask);
-    tscatter+=usecond();
-  }
-  /*
-  std::cout << GridLogPerformance << " Cshift (s) copy    "<<tcopy/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) gather  "<<tgather/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) scatter "<<tscatter/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) comm    "<<tcomms/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s "<<2*xbytes<< " Bytes "<<std::endl;
-  */
-}
-#else 
-template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
-{
-  typedef typename vobj::vector_type vector_type;
-  typedef typename vobj::scalar_type scalar_type;
-
-  GridBase *grid=rhs.Grid();
-  Lattice<vobj> temp(rhs.Grid());
-
-  int fd              = rhs.Grid()->_fdimensions[dimension];
-  int rd              = rhs.Grid()->_rdimensions[dimension];
-  int pd              = rhs.Grid()->_processors[dimension];
-  int simd_layout     = rhs.Grid()->_simd_layout[dimension];
-  int comm_dim        = rhs.Grid()->_processors[dimension] >1 ;
-  assert(simd_layout==1);
-  assert(comm_dim==1);
-  assert(shift>=0);
-  assert(shift<fd);
-  RealD tcopy=0.0;
-  RealD tgather=0.0;
-  RealD tscatter=0.0;
-  RealD tcomms=0.0;
-  uint64_t xbytes=0;
-  
-  int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
-  static cshiftVector<vobj> send_buf_v; send_buf_v.resize(buffer_size);
-  static cshiftVector<vobj> recv_buf_v; recv_buf_v.resize(buffer_size);
-  vobj *send_buf;
-  vobj *recv_buf;
-  {
-    grid->ShmBufferFreeAll();
-    size_t bytes = buffer_size*sizeof(vobj);
-    send_buf=(vobj *)grid->ShmBufferMalloc(bytes);
-    recv_buf=(vobj *)grid->ShmBufferMalloc(bytes);
-  }
-    
-  int cb= (cbmask==0x2)? Odd : Even;
-  int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
-
-  for(int x=0;x<rd;x++){       
-
-    int sx        =  (x+sshift)%rd;
-    int comm_proc = ((x+sshift)/rd)%pd;
-    
-    if (comm_proc==0) {
-
-      tcopy-=usecond();
-      Copy_plane(ret,rhs,dimension,x,sx,cbmask); 
-      tcopy+=usecond();
-
-    } else {
-
-      int words = buffer_size;
-      if (cbmask != 0x3) words=words>>1;
-
-      int bytes = words * sizeof(vobj);
-
-      tgather-=usecond();
-      Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask);
-      tgather+=usecond();
-
-      //      int rank           = grid->_processor;
-      int recv_from_rank;
-      int xmit_to_rank;
-      grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
-
-
-      tcomms-=usecond();
-      //      grid->Barrier();
-
-      acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes);
-      grid->SendToRecvFrom((void *)&send_buf[0],
-			   xmit_to_rank,
-			   (void *)&recv_buf[0],
-			   recv_from_rank,
-			   bytes);
-      xbytes+=bytes;
-      acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes);
-
-      //      grid->Barrier();
-      tcomms+=usecond();
-
-      tscatter-=usecond();
-      Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask);
-      tscatter+=usecond();
-    }
-  }
-  /*
-  std::cout << GridLogPerformance << " Cshift copy    "<<tcopy/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift gather  "<<tgather/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift scatter "<<tscatter/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift comm    "<<tcomms/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s "<<2*xbytes<< " Bytes "<<std::endl;
-  */
-}
-
-template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
-{
-  GridBase *grid=rhs.Grid();
-  const int Nsimd = grid->Nsimd();
-  typedef typename vobj::vector_type vector_type;
-  typedef typename vobj::scalar_object scalar_object;
-  typedef typename vobj::scalar_type scalar_type;
-   
-  int fd = grid->_fdimensions[dimension];
-  int rd = grid->_rdimensions[dimension];
-  int ld = grid->_ldimensions[dimension];
-  int pd = grid->_processors[dimension];
-  int simd_layout     = grid->_simd_layout[dimension];
-  int comm_dim        = grid->_processors[dimension] >1 ;
-
-  //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd
-  //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout 
-  //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl;
-
-  assert(comm_dim==1);
-  assert(simd_layout==2);
-  assert(shift>=0);
-  assert(shift<fd);
-  RealD tcopy=0.0;
-  RealD tgather=0.0;
-  RealD tscatter=0.0;
-  RealD tcomms=0.0;
-  uint64_t xbytes=0;
-
-  int permute_type=grid->PermuteType(dimension);
-
-  ///////////////////////////////////////////////
-  // Simd direction uses an extract/merge pair
-  ///////////////////////////////////////////////
-  int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
-  //  int words = sizeof(vobj)/sizeof(vector_type);
-
-  static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd);
-  static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd);
-  scalar_object *  recv_buf_extract_mpi;
-  scalar_object *  send_buf_extract_mpi;
-  {
-    size_t bytes = sizeof(scalar_object)*buffer_size;
-    grid->ShmBufferFreeAll();
-    send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
-    recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
-  }
-  for(int s=0;s<Nsimd;s++){
-    send_buf_extract[s].resize(buffer_size);
-    recv_buf_extract[s].resize(buffer_size);
-  }
-
-  int bytes = buffer_size*sizeof(scalar_object);
-
-  ExtractPointerArray<scalar_object>  pointers(Nsimd); // 
-  ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers
-
-  ///////////////////////////////////////////
-  // Work out what to send where
-  ///////////////////////////////////////////
-  int cb    = (cbmask==0x2)? Odd : Even;
-  int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
-
-  // loop over outer coord planes orthog to dim
-  for(int x=0;x<rd;x++){       
-
-    // FIXME call local permute copy if none are offnode.
-    for(int i=0;i<Nsimd;i++){       
-      pointers[i] = &send_buf_extract[i][0];
-    }
-    tgather-=usecond();
-    int sx   = (x+sshift)%rd;
-    Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
-    tgather+=usecond();
-
-    for(int i=0;i<Nsimd;i++){
-      
-      int inner_bit = (Nsimd>>(permute_type+1));
-      int ic= (i&inner_bit)? 1:0;
-
-      int my_coor          = rd*ic + x;
-      int nbr_coor         = my_coor+sshift;
-      int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors
-
-      int nbr_ic   = (nbr_coor%ld)/rd;    // inner coord of peer
-      int nbr_ox   = (nbr_coor%rd);       // outer coord of peer
-      int nbr_lane = (i&(~inner_bit));
-
-      int recv_from_rank;
-      int xmit_to_rank;
-
-      if (nbr_ic) nbr_lane|=inner_bit;
-
-      assert (sx == nbr_ox);
-
-      if(nbr_proc){
-	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank); 
-
-	tcomms-=usecond();
-	//	grid->Barrier();
-
-	acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes);
-	grid->SendToRecvFrom((void *)send_buf_extract_mpi,
 			     xmit_to_rank,
-			     (void *)recv_buf_extract_mpi,
+			     (void *)&hrecv_buf[0],
 			     recv_from_rank,
 			     bytes);
-	acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes);
+	acceleratorCopyToDevice((void *)&hrecv_buf[0],(void *)recv_buf_extract_mpi,bytes);
-	xbytes+=bytes;
-
-	//	grid->Barrier();
-	tcomms+=usecond();
-	rpointers[i] = &recv_buf_extract[i][0];
-      } else { 
-	rpointers[i] = &send_buf_extract[nbr_lane][0];
-      }
-
-    }
-    tscatter-=usecond();
-    Scatter_plane_merge(ret,rpointers,dimension,x,cbmask);
-    tscatter+=usecond();
-
-  }
-  /*
-  std::cout << GridLogPerformance << " Cshift (s) copy    "<<tcopy/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) gather  "<<tgather/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) scatter "<<tscatter/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift (s) comm    "<<tcomms/1e3<<" ms"<<std::endl;
-  std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s"<<std::endl;
-  */
-}
 #endif
+
+	xbytes+=bytes;
+	grid->Barrier();
+	tcomms+=usecond();
+
+	rpointers[i] = &recv_buf_extract[i][0];
+      } else { 
+	rpointers[i] = &send_buf_extract[nbr_lane][0];
+      }
+
+    }
+    tscatter-=usecond();
+    Scatter_plane_merge(ret,rpointers,dimension,x,cbmask);
+    tscatter+=usecond();
+  }
+  if(Cshift_verbose){
+    std::cout << GridLogPerformance << " Cshift (s) copy    "<<tcopy/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift (s) gather  "<<tgather/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift (s) scatter "<<tscatter/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift (s) comm    "<<tcomms/1e3<<" ms"<<std::endl;
+    std::cout << GridLogPerformance << " Cshift BW      "<<(2.0*xbytes)/tcomms<<" MB/s "<<2*xbytes<< " Bytes "<<std::endl;
+  }
+}
+
 NAMESPACE_END(Grid); 
 
 #endif

Grid/cshift/Cshift_table.cc

@@ -1,5 +1,5 @@
 #include <Grid/GridCore.h>       
 NAMESPACE_BEGIN(Grid);
 std::vector<std::pair<int,int> > Cshift_table; 
-commVector<std::pair<int,int> > Cshift_table_device; 
+deviceVector<std::pair<int,int> > Cshift_table_device; 
 NAMESPACE_END(Grid);

Grid/lattice/Lattice_arith.h

@@ -257,17 +257,30 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice
   });
 }
 
+#define FAST_AXPY_NORM
 template<class sobj,class vobj> inline
 RealD axpy_norm(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y)
 {
   GRID_TRACE("axpy_norm");
-    return axpy_norm_fast(ret,a,x,y);
+#ifdef FAST_AXPY_NORM
+  return axpy_norm_fast(ret,a,x,y);
+#else
+  ret = a*x+y;
+  RealD nn=norm2(ret);
+  return nn;
+#endif
 }
 template<class sobj,class vobj> inline
 RealD axpby_norm(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y)
 {
   GRID_TRACE("axpby_norm");
-    return axpby_norm_fast(ret,a,b,x,y);
+#ifdef FAST_AXPY_NORM
+  return axpby_norm_fast(ret,a,b,x,y);
+#else
+  ret = a*x+b*y;
+  RealD nn=norm2(ret);
+  return nn;
+#endif
 }
 
 /// Trace product

Grid/lattice/Lattice_base.h

@@ -236,10 +236,13 @@ public:
   template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){
     vobj vtmp;
     vtmp = r;
-#if 0
+#if 1
+    deviceVector<vobj> vvtmp(1);
+    acceleratorPut(vvtmp[0],vtmp);
+    vobj *vvtmp_p = & vvtmp[0];
     auto me  = View(AcceleratorWrite);
     accelerator_for(ss,me.size(),vobj::Nsimd(),{
-	auto stmp=coalescedRead(vtmp);
+	auto stmp=coalescedRead(*vvtmp_p);
 	coalescedWrite(me[ss],stmp);
     });
 #else    

Grid/lattice/Lattice_basis.h

@@ -53,36 +53,19 @@ void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)
   typedef decltype(basis[0]) Field;
   typedef decltype(basis[0].View(AcceleratorRead)) View;
 
-  Vector<View> basis_v; basis_v.reserve(basis.size());
+  hostVector<View>  h_basis_v(basis.size());
-  typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj;
+  deviceVector<View> d_basis_v(basis.size());
+  typedef typename std::remove_reference<decltype(h_basis_v[0][0])>::type vobj;
   typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t;
+
   GridBase* grid = basis[0].Grid();
       
   for(int k=0;k<basis.size();k++){
-    basis_v.push_back(basis[k].View(AcceleratorWrite));
+    h_basis_v[k] = basis[k].View(AcceleratorWrite);
+    acceleratorPut(d_basis_v[k],h_basis_v[k]);
   }
 
-#if ( !(defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL)) )
+  View *basis_vp = &d_basis_v[0];
-  int max_threads = thread_max();
-  Vector < vobj > Bt(Nm * max_threads);
-  thread_region
-    {
-      vobj* B = &Bt[Nm * thread_num()];
-      thread_for_in_region(ss, grid->oSites(),{
-	  for(int j=j0; j<j1; ++j) B[j]=0.;
-      
-	  for(int j=j0; j<j1; ++j){
-	    for(int k=k0; k<k1; ++k){
-	      B[j] +=Qt(j,k) * basis_v[k][ss];
-	    }
-	  }
-	  for(int j=j0; j<j1; ++j){
-	    basis_v[j][ss] = B[j];
-	  }
-	});
-    }
-#else
-  View *basis_vp = &basis_v[0];
 
   int nrot = j1-j0;
   if (!nrot) // edge case not handled gracefully by Cuda
@@ -91,17 +74,19 @@ void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)
   uint64_t oSites   =grid->oSites();
   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead
 
-  Vector <vobj> Bt(siteBlock * nrot); 
+  deviceVector <vobj> Bt(siteBlock * nrot); 
   auto Bp=&Bt[0];
 
   // GPU readable copy of matrix
-  Vector<Coeff_t> Qt_jv(Nm*Nm);
+  hostVector<Coeff_t> h_Qt_jv(Nm*Nm);
+  deviceVector<Coeff_t> Qt_jv(Nm*Nm);
   Coeff_t *Qt_p = & Qt_jv[0];
   thread_for(i,Nm*Nm,{
       int j = i/Nm;
       int k = i%Nm;
-      Qt_p[i]=Qt(j,k);
+      h_Qt_jv[i]=Qt(j,k);
   });
+  acceleratorCopyToDevice(&h_Qt_jv[0],Qt_p,Nm*Nm*sizeof(Coeff_t));
 
   // Block the loop to keep storage footprint down
   for(uint64_t s=0;s<oSites;s+=siteBlock){
@@ -137,9 +122,8 @@ void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)
 	coalescedWrite(basis_vp[jj][sss],coalescedRead(Bp[ss*nrot+j]));
       });
   }
-#endif
 
-  for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
+  for(int k=0;k<basis.size();k++) h_basis_v[k].ViewClose();
 }
 
 // Extract a single rotated vector
@@ -152,16 +136,19 @@ void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,in
 
   result.Checkerboard() = basis[0].Checkerboard();
 
-  Vector<View> basis_v; basis_v.reserve(basis.size());
+  hostVector<View>  h_basis_v(basis.size());
+  deviceVector<View> d_basis_v(basis.size());
   for(int k=0;k<basis.size();k++){
-    basis_v.push_back(basis[k].View(AcceleratorRead));
+    h_basis_v[k]=basis[k].View(AcceleratorRead);
+    acceleratorPut(d_basis_v[k],h_basis_v[k]);
   }
-  vobj zz=Zero();
-  Vector<double> Qt_jv(Nm);
-  double * Qt_j = & Qt_jv[0];
-  for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k);
 
-  auto basis_vp=& basis_v[0];
+  vobj zz=Zero();
+  deviceVector<double> Qt_jv(Nm);
+  double * Qt_j = & Qt_jv[0];
+  for(int k=0;k<Nm;++k) acceleratorPut(Qt_j[k],Qt(j,k));
+
+  auto basis_vp=& d_basis_v[0];
   autoView(result_v,result,AcceleratorWrite);
   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{
     vobj zzz=Zero();
@@ -171,7 +158,7 @@ void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,in
     }
     coalescedWrite(result_v[ss], B);
   });
-  for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
+  for(int k=0;k<basis.size();k++) h_basis_v[k].ViewClose();
 }
 
 template<class Field>

Grid/lattice/Lattice_reduction.h

@@ -46,7 +46,7 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites)
   //  const int Nsimd = vobj::Nsimd();
   const int nthread = GridThread::GetThreads();
 
-  Vector<sobj> sumarray(nthread);
+  std::vector<sobj> sumarray(nthread);
   for(int i=0;i<nthread;i++){
     sumarray[i]=Zero();
   }
@@ -75,7 +75,7 @@ inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites)
 
   const int nthread = GridThread::GetThreads();
 
-  Vector<sobj> sumarray(nthread);
+  std::vector<sobj> sumarray(nthread);
   for(int i=0;i<nthread;i++){
     sumarray[i]=Zero();
   }
@@ -290,8 +290,10 @@ template<class vobj>
 inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) {
   GridBase *grid = left.Grid();
 
+  bool ok;
 #ifdef GRID_SYCL
   uint64_t csum=0;
+  uint64_t csum2=0;
   if ( FlightRecorder::LoggingMode != FlightRecorder::LoggingModeNone)
   {
     // Hack
@@ -300,13 +302,33 @@ inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &righ
     Integer words = left.Grid()->oSites()*sizeof(vobj)/sizeof(uint64_t);
     uint64_t *base= (uint64_t *)&l_v[0];
     csum=svm_xor(base,words);
+    ok = FlightRecorder::CsumLog(csum);
+    if ( !ok ) {
+      csum2=svm_xor(base,words);
+      std::cerr<< " Bad CSUM " << std::hex<< csum << " recomputed as "<<csum2<<std::dec<<std::endl;
+    } else {
+      //      csum2=svm_xor(base,words);
+      //      std::cerr<< " ok CSUM " << std::hex<< csum << " recomputed as "<<csum2<<std::dec<<std::endl;
+    }
+    assert(ok);
   }
-  FlightRecorder::CsumLog(csum);
 #endif
+  FlightRecorder::StepLog("rank inner product");
   ComplexD nrm = rankInnerProduct(left,right);
+  //  ComplexD nrmck=nrm;
   RealD local = real(nrm);
-  FlightRecorder::NormLog(real(nrm)); 
+  ok = FlightRecorder::NormLog(real(nrm));
+  if ( !ok ) {
+    ComplexD nrm2 = rankInnerProduct(left,right);
+    RealD local2 = real(nrm2);
+    std::cerr<< " Bad NORM " << local << " recomputed as "<<local2<<std::endl;
+    assert(ok);
+  }
+  FlightRecorder::StepLog("Start global sum");
+  //  grid->GlobalSumP2P(nrm);
   grid->GlobalSum(nrm);
+  FlightRecorder::StepLog("Finished global sum");
+  //  std::cout << " norm "<< nrm << " p2p norm "<<nrmck<<std::endl;
   FlightRecorder::ReductionLog(local,real(nrm)); 
   return nrm;
 }
@@ -343,18 +365,6 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt
   autoView( x_v, x, AcceleratorRead);
   autoView( y_v, y, AcceleratorRead);
   autoView( z_v, z, AcceleratorWrite);
-#if 0
-  typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t;
-  Vector<inner_t> inner_tmp(sites);
-  auto inner_tmp_v = &inner_tmp[0];
-
-  accelerator_for( ss, sites, nsimd,{
-      auto tmp = a*x_v(ss)+b*y_v(ss);
-      coalescedWrite(inner_tmp_v[ss],innerProductD(tmp,tmp));
-      coalescedWrite(z_v[ss],tmp);
-  });
-  nrm = real(TensorRemove(sum(inner_tmp_v,sites)));
-#else
   typedef decltype(innerProduct(x_v[0],y_v[0])) inner_t;
   deviceVector<inner_t> inner_tmp;
   inner_tmp.resize(sites);
@@ -365,9 +375,44 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt
       coalescedWrite(inner_tmp_v[ss],innerProduct(tmp,tmp));
       coalescedWrite(z_v[ss],tmp);
   });
-  nrm = real(TensorRemove(sumD(inner_tmp_v,sites)));
+  bool ok;
+#ifdef GRID_SYCL
+  uint64_t csum=0;
+  uint64_t csum2=0;
+  if ( FlightRecorder::LoggingMode != FlightRecorder::LoggingModeNone)
+  {
+    // z_v
+    {
+      Integer words = sites*sizeof(vobj)/sizeof(uint64_t);
+      uint64_t *base= (uint64_t *)&z_v[0];
+      csum=svm_xor(base,words);
+      ok = FlightRecorder::CsumLog(csum);
+      if ( !ok ) {
+	csum2=svm_xor(base,words);
+	std::cerr<< " Bad z_v CSUM " << std::hex<< csum << " recomputed as "<<csum2<<std::dec<<std::endl;
+      }
+      assert(ok);
+    }
+    // inner_v
+    {
+      Integer words = sites*sizeof(inner_t)/sizeof(uint64_t);
+      uint64_t *base= (uint64_t *)&inner_tmp_v[0];
+      csum=svm_xor(base,words);
+      ok = FlightRecorder::CsumLog(csum);
+      if ( !ok ) {
+	csum2=svm_xor(base,words);
+	std::cerr<< " Bad inner_tmp_v CSUM " << std::hex<< csum << " recomputed as "<<csum2<<std::dec<<std::endl;
+      }
+      assert(ok);
+    }
+  }
 #endif
+  nrm = real(TensorRemove(sumD(inner_tmp_v,sites)));
+  ok = FlightRecorder::NormLog(real(nrm));
+  assert(ok);
+  RealD local = real(nrm);
   grid->GlobalSum(nrm);
+  FlightRecorder::ReductionLog(local,real(nrm));
   return nrm; 
 }
  
@@ -377,7 +422,7 @@ innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Latti
   conformable(left,right);
 
   typedef typename vobj::vector_typeD vector_type;
-  Vector<ComplexD> tmp(2);
+  std::vector<ComplexD> tmp(2);
 
   GridBase *grid = left.Grid();
 
@@ -387,8 +432,8 @@ innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Latti
   // GPU
   typedef decltype(innerProductD(vobj(),vobj())) inner_t;
   typedef decltype(innerProductD(vobj(),vobj())) norm_t;
-  Vector<inner_t> inner_tmp(sites);
+  deviceVector<inner_t> inner_tmp(sites);
-  Vector<norm_t>  norm_tmp(sites);
+  deviceVector<norm_t>  norm_tmp(sites);
   auto inner_tmp_v = &inner_tmp[0];
   auto norm_tmp_v = &norm_tmp[0];
   {
@@ -438,7 +483,9 @@ inline auto sum(const LatticeTrinaryExpression<Op,T1,T2,T3> & expr)
 // sliceSum, sliceInnerProduct, sliceAxpy, sliceNorm etc...
 //////////////////////////////////////////////////////////////////////////////////////////////////////////////
 
-template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<typename vobj::scalar_object> &result,int orthogdim)
+template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,
+					  std::vector<typename vobj::scalar_object> &result,
+					  int orthogdim)
 {
   ///////////////////////////////////////////////////////
   // FIXME precision promoted summation
@@ -460,8 +507,8 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<
   int ld=grid->_ldimensions[orthogdim];
   int rd=grid->_rdimensions[orthogdim];
 
-  Vector<vobj> lvSum(rd); // will locally sum vectors first
+  std::vector<vobj> lvSum(rd); // will locally sum vectors first
-  Vector<sobj> lsSum(ld,Zero());                    // sum across these down to scalars
+  std::vector<sobj> lsSum(ld,Zero());                    // sum across these down to scalars
   ExtractBuffer<sobj> extracted(Nsimd);                  // splitting the SIMD
 
   result.resize(fd); // And then global sum to return the same vector to every node 
@@ -509,6 +556,8 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<
   scalar_type * ptr = (scalar_type *) &result[0];
   int words = fd*sizeof(sobj)/sizeof(scalar_type);
   grid->GlobalSumVector(ptr, words);
+  //  std::cout << GridLogMessage << " sliceSum local"<<t_sum<<" us, host+mpi "<<t_rest<<std::endl;
+  
 }
 template<class vobj> inline
 std::vector<typename vobj::scalar_object> 
@@ -552,8 +601,8 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti
   int ld=grid->_ldimensions[orthogdim];
   int rd=grid->_rdimensions[orthogdim];
 
-  Vector<vector_type> lvSum(rd); // will locally sum vectors first
+  std::vector<vector_type> lvSum(rd); // will locally sum vectors first
-  Vector<scalar_type > lsSum(ld,scalar_type(0.0));                    // sum across these down to scalars
+  std::vector<scalar_type > lsSum(ld,scalar_type(0.0));                    // sum across these down to scalars
   ExtractBuffer<iScalar<scalar_type> > extracted(Nsimd);   // splitting the SIMD  
 
   result.resize(fd); // And then global sum to return the same vector to every node for IO to file

Grid/lattice/Lattice_reduction_gpu.h

@@ -214,22 +214,12 @@ inline typename vobj::scalar_objectD sumD_gpu_small(const vobj *lat, Integer osi
   // Move out of UVM
   // Turns out I had messed up the synchronise after move to compute stream
   // as running this on the default stream fools the synchronise
-#undef UVM_BLOCK_BUFFER  
+  deviceVector<sobj> buffer(numBlocks);
-#ifndef UVM_BLOCK_BUFFER  
-  commVector<sobj> buffer(numBlocks);
   sobj *buffer_v = &buffer[0];
   sobj result;
   reduceKernel<<< numBlocks, numThreads, smemSize, computeStream >>>(lat, buffer_v, size);
   accelerator_barrier();
   acceleratorCopyFromDevice(buffer_v,&result,sizeof(result));
-#else
-  Vector<sobj> buffer(numBlocks);
-  sobj *buffer_v = &buffer[0];
-  sobj result;
-  reduceKernel<<< numBlocks, numThreads, smemSize, computeStream >>>(lat, buffer_v, size);
-  accelerator_barrier();
-  result = *buffer_v;
-#endif
   return result;
 }
 
@@ -244,7 +234,7 @@ inline typename vobj::scalar_objectD sumD_gpu_large(const vobj *lat, Integer osi
   
   const int words = sizeof(vobj)/sizeof(vector);
 
-  Vector<vector> buffer(osites);
+  deviceVector<vector> buffer(osites);
   vector *dat = (vector *)lat;
   vector *buf = &buffer[0];
   iScalar<vector> *tbuf =(iScalar<vector> *)  &buffer[0];

Grid/lattice/Lattice_reduction_sycl.h

@@ -4,33 +4,28 @@ NAMESPACE_BEGIN(Grid);
 // Possibly promote to double and sum
 /////////////////////////////////////////////////////////////////////////////////////////////////////////
 
+
 template <class vobj>
 inline typename vobj::scalar_objectD sumD_gpu_tensor(const vobj *lat, Integer osites) 
 {
   typedef typename vobj::scalar_object sobj;
   typedef typename vobj::scalar_objectD sobjD;
-  static Vector<sobj> mysum;
+
-  mysum.resize(1);
-  sobj *mysum_p = & mysum[0];
   sobj identity; zeroit(identity);
-  mysum[0] = identity;
+  sobj ret; zeroit(ret);
-  sobj ret ; 
-
   Integer nsimd= vobj::Nsimd();
-
+  { 
-  const cl::sycl::property_list PropList ({ cl::sycl::property::reduction::initialize_to_identity() });
+    sycl::buffer<sobj, 1> abuff(&ret, {1});
-  theGridAccelerator->submit([&](cl::sycl::handler &cgh) {
+    theGridAccelerator->submit([&](sycl::handler &cgh) {
-    auto Reduction = cl::sycl::reduction(mysum_p,identity,std::plus<>(),PropList);
+      auto Reduction = sycl::reduction(abuff,cgh,identity,std::plus<>());
-     cgh.parallel_for(cl::sycl::range<1>{osites},
+      cgh.parallel_for(sycl::range<1>{osites},
-		      Reduction,
+                      Reduction,
-		      [=] (cl::sycl::id<1> item, auto &sum) {
+                      [=] (sycl::id<1> item, auto &sum) {
-      auto osite   = item[0];
+                        auto osite   = item[0];
-      sum +=Reduce(lat[osite]);
+                        sum +=Reduce(lat[osite]);
-     });
+                      });
-   });
+    });
-  theGridAccelerator->wait();
+  }
-  ret = mysum[0];
-  //  free(mysum,*theGridAccelerator);
   sobjD dret; convertType(dret,ret);
   return dret;
 }
@@ -76,59 +71,22 @@ inline typename vobj::scalar_object sum_gpu_large(const vobj *lat, Integer osite
 
 template<class Word> Word svm_xor(Word *vec,uint64_t L)
 {
-  Word xorResult; xorResult = 0;
-  static Vector<Word> d_sum;
-  d_sum.resize(1);
-  Word *d_sum_p=&d_sum[0];
   Word identity;  identity=0;
-  d_sum[0] = identity;
+  Word ret = 0;
-  const cl::sycl::property_list PropList ({ cl::sycl::property::reduction::initialize_to_identity() });
+  { 
-  theGridAccelerator->submit([&](cl::sycl::handler &cgh) {
+    sycl::buffer<Word, 1> abuff(&ret, {1});
-    auto Reduction = cl::sycl::reduction(d_sum_p,identity,std::bit_xor<>(),PropList);
+    theGridAccelerator->submit([&](sycl::handler &cgh) {
-     cgh.parallel_for(cl::sycl::range<1>{L},
+      auto Reduction = sycl::reduction(abuff,cgh,identity,std::bit_xor<>());
-		      Reduction,
+      cgh.parallel_for(sycl::range<1>{L},
-		      [=] (cl::sycl::id<1> index, auto &sum) {
+                      Reduction,
-	 sum^=vec[index];
+                      [=] (sycl::id<1> index, auto &sum) {
-     });
+                        sum ^=vec[index];
-   });
+                      });
+    });
+  }
   theGridAccelerator->wait();
-  Word ret = d_sum[0];
-  //  free(d_sum,*theGridAccelerator);
   return ret;
 }
 
 NAMESPACE_END(Grid);
 
-/*
-
-template <class vobj>
-inline typename vobj::scalar_objectD sumD_gpu_repack(const vobj *lat, Integer osites)
-{
-  typedef typename vobj::vector_type  vector;
-  typedef typename vobj::scalar_type  scalar;
-
-  typedef typename vobj::scalar_typeD scalarD;
-  typedef typename vobj::scalar_objectD sobjD;
-
-  sobjD ret;
-  scalarD *ret_p = (scalarD *)&ret;
-  
-  const int nsimd = vobj::Nsimd();
-  const int words = sizeof(vobj)/sizeof(vector);
-
-  Vector<scalar> buffer(osites*nsimd);
-  scalar *buf = &buffer[0];
-  vector *dat = (vector *)lat;
-
-  for(int w=0;w<words;w++) {
-
-    accelerator_for(ss,osites,nsimd,{
-	int lane = acceleratorSIMTlane(nsimd);
-	buf[ss*nsimd+lane] = dat[ss*words+w].getlane(lane);
-    });
-    //Precision change at this point is to late to gain precision
-    ret_p[w] = svm_reduce(buf,nsimd*osites);
-  }
-  return ret;
-}
-*/

Grid/lattice/Lattice_slicesum_core.h

@@ -21,9 +21,18 @@ NAMESPACE_BEGIN(Grid);
 
 
 #if defined(GRID_CUDA) || defined(GRID_HIP)
-template<class vobj> inline void sliceSumReduction_cub_small(const vobj *Data, Vector<vobj> &lvSum, const int rd, const int e1, const int e2, const int stride, const int ostride, const int Nsimd) {
+template<class vobj>
+inline void sliceSumReduction_cub_small(const vobj *Data,
+					std::vector<vobj> &lvSum,
+					const int rd,
+					const int e1,
+					const int e2,
+					const int stride,
+					const int ostride,
+					const int Nsimd)
+{
   size_t subvol_size = e1*e2;
-  commVector<vobj> reduction_buffer(rd*subvol_size);
+  deviceVector<vobj> reduction_buffer(rd*subvol_size);
   auto rb_p = &reduction_buffer[0];
   vobj zero_init;
   zeroit(zero_init);
@@ -46,7 +55,7 @@ template<class vobj> inline void sliceSumReduction_cub_small(const vobj *Data, V
   d_offsets = static_cast<int*>(acceleratorAllocDevice((rd+1)*sizeof(int)));
   
   //copy offsets to device
-  acceleratorCopyToDeviceAsync(&offsets[0],d_offsets,sizeof(int)*(rd+1),computeStream);
+  acceleratorCopyToDeviceAsynch(&offsets[0],d_offsets,sizeof(int)*(rd+1),computeStream);
   
   
   gpuError_t gpuErr = gpucub::DeviceSegmentedReduce::Reduce(temp_storage_array, temp_storage_bytes, rb_p,d_out, rd, d_offsets, d_offsets+1, ::gpucub::Sum(), zero_init, computeStream);
@@ -79,7 +88,7 @@ template<class vobj> inline void sliceSumReduction_cub_small(const vobj *Data, V
     exit(EXIT_FAILURE);
   }
   
-  acceleratorCopyFromDeviceAsync(d_out,&lvSum[0],rd*sizeof(vobj),computeStream);
+  acceleratorCopyFromDeviceAsynch(d_out,&lvSum[0],rd*sizeof(vobj),computeStream);
   
   //sync after copy
   accelerator_barrier();
@@ -94,7 +103,15 @@ template<class vobj> inline void sliceSumReduction_cub_small(const vobj *Data, V
 
 
 #if defined(GRID_SYCL)
-template<class vobj> inline void sliceSumReduction_sycl_small(const vobj *Data, Vector <vobj> &lvSum, const int  &rd, const int &e1, const int &e2, const int &stride, const int &ostride, const int &Nsimd)
+template<class vobj>
+inline void sliceSumReduction_sycl_small(const vobj *Data,
+					 std::vector <vobj> &lvSum,
+					 const int  &rd,
+					 const int &e1,
+					 const int &e2,
+					 const int &stride,
+					 const int &ostride,
+					 const int &Nsimd)
 {
   size_t subvol_size = e1*e2;
 
@@ -105,7 +122,7 @@ template<class vobj> inline void sliceSumReduction_sycl_small(const vobj *Data,
     mysum[r] = vobj_zero; 
   }
 
-  commVector<vobj> reduction_buffer(rd*subvol_size);    
+  deviceVector<vobj> reduction_buffer(rd*subvol_size);    
 
   auto rb_p = &reduction_buffer[0];
 
@@ -124,11 +141,11 @@ template<class vobj> inline void sliceSumReduction_sycl_small(const vobj *Data,
   });
 
   for (int r = 0; r < rd; r++) {
-      theGridAccelerator->submit([&](cl::sycl::handler &cgh) {
+      theGridAccelerator->submit([&](sycl::handler &cgh) {
-          auto Reduction = cl::sycl::reduction(&mysum[r],std::plus<>());
+          auto Reduction = sycl::reduction(&mysum[r],std::plus<>());
-          cgh.parallel_for(cl::sycl::range<1>{subvol_size},
+          cgh.parallel_for(sycl::range<1>{subvol_size},
           Reduction,
-          [=](cl::sycl::id<1> item, auto &sum) {
+          [=](sycl::id<1> item, auto &sum) {
               auto s = item[0];
               sum += rb_p[r*subvol_size+s];
           });
@@ -144,14 +161,23 @@ template<class vobj> inline void sliceSumReduction_sycl_small(const vobj *Data,
 }
 #endif
 
-template<class vobj> inline void sliceSumReduction_large(const vobj *Data, Vector<vobj> &lvSum, const int rd, const int e1, const int e2, const int stride, const int ostride, const int Nsimd) {
+template<class vobj>
+inline void sliceSumReduction_large(const vobj *Data,
+				    std::vector<vobj> &lvSum,
+				    const int rd,
+				    const int e1,
+				    const int e2,
+				    const int stride,
+				    const int ostride,
+				    const int Nsimd)
+{
   typedef typename vobj::vector_type vector;
   const int words = sizeof(vobj)/sizeof(vector);
   const int osites = rd*e1*e2;
-  commVector<vector>buffer(osites);
+  deviceVector<vector>buffer(osites);
   vector *dat = (vector *)Data;
   vector *buf = &buffer[0];
-  Vector<vector> lvSum_small(rd);
+  std::vector<vector> lvSum_small(rd);
   vector *lvSum_ptr = (vector *)&lvSum[0];
 
   for (int w = 0; w < words; w++) {
@@ -168,13 +194,18 @@ template<class vobj> inline void sliceSumReduction_large(const vobj *Data, Vecto
     for (int r = 0; r < rd; r++) {
       lvSum_ptr[w+words*r]=lvSum_small[r];
     }
-
   }
-
-  
 }
 
-template<class vobj> inline void sliceSumReduction_gpu(const Lattice<vobj> &Data, Vector<vobj> &lvSum, const int rd, const int e1, const int e2, const int stride, const int ostride, const int Nsimd)
+template<class vobj>
+inline void sliceSumReduction_gpu(const Lattice<vobj> &Data,
+				  std::vector<vobj> &lvSum,
+				  const int rd,
+				  const int e1,
+				  const int e2,
+				  const int stride,
+				  const int ostride,
+				  const int Nsimd)
 {
   autoView(Data_v, Data, AcceleratorRead); //reduction libraries cannot deal with large vobjs so we split into small/large case.
     if constexpr (sizeof(vobj) <= 256) { 
@@ -192,7 +223,15 @@ template<class vobj> inline void sliceSumReduction_gpu(const Lattice<vobj> &Data
 }
 
 
-template<class vobj> inline void sliceSumReduction_cpu(const Lattice<vobj> &Data, Vector<vobj> &lvSum, const int &rd, const int &e1, const int &e2, const int &stride, const int &ostride, const int &Nsimd)
+template<class vobj>
+inline void sliceSumReduction_cpu(const Lattice<vobj> &Data,
+				  std::vector<vobj> &lvSum,
+				  const int &rd,
+				  const int &e1,
+				  const int &e2,
+				  const int &stride,
+				  const int &ostride,
+				  const int &Nsimd)
 {
   // sum over reduced dimension planes, breaking out orthog dir
   // Parallel over orthog direction
@@ -208,16 +247,20 @@ template<class vobj> inline void sliceSumReduction_cpu(const Lattice<vobj> &Data
   });
 }
 
-template<class vobj> inline void sliceSumReduction(const Lattice<vobj> &Data, Vector<vobj> &lvSum, const int &rd, const int &e1, const int &e2, const int &stride, const int &ostride, const int &Nsimd) 
+template<class vobj> inline void sliceSumReduction(const Lattice<vobj> &Data,
+						   std::vector<vobj> &lvSum,
+						   const int &rd,
+						   const int &e1,
+						   const int &e2,
+						   const int &stride,
+						   const int &ostride,
+						   const int &Nsimd) 
 {
-  #if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL)
+#if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL)
-  
   sliceSumReduction_gpu(Data, lvSum, rd, e1, e2, stride, ostride, Nsimd);
-  
+#else
-  #else
   sliceSumReduction_cpu(Data, lvSum, rd, e1, e2, stride, ostride, Nsimd);
-
+#endif
-  #endif
 }
 
 

Grid/lattice/PaddedCell.h

@@ -54,7 +54,7 @@ struct CshiftImplGauge: public CshiftImplBase<typename Gimpl::GaugeLinkField::ve
  *
  */
 
-template<class vobj> inline void ScatterSlice(const cshiftVector<vobj> &buf,
+template<class vobj> inline void ScatterSlice(const deviceVector<vobj> &buf,
 					      Lattice<vobj> &lat,
 					      int x,
 					      int dim,
@@ -140,7 +140,7 @@ template<class vobj> inline void ScatterSlice(const cshiftVector<vobj> &buf,
   });
 }
 
-template<class vobj> inline void GatherSlice(cshiftVector<vobj> &buf,
+template<class vobj> inline void GatherSlice(deviceVector<vobj> &buf,
 					     const Lattice<vobj> &lat,
 					     int x,
 					     int dim,
@@ -462,13 +462,19 @@ public:
     int rNsimd = Nsimd / simd[dimension];
     assert( buffer_size == from.Grid()->_slice_nblock[dimension]*from.Grid()->_slice_block[dimension] / simd[dimension]);
 
-    static cshiftVector<vobj> send_buf; 
+    static deviceVector<vobj> send_buf; 
-    static cshiftVector<vobj> recv_buf;
+    static deviceVector<vobj> recv_buf;
     send_buf.resize(buffer_size*2*depth);    
     recv_buf.resize(buffer_size*2*depth);
+#ifndef ACCELERATOR_AWARE_MPI
+    static hostVector<vobj> hsend_buf; 
+    static hostVector<vobj> hrecv_buf;
+    hsend_buf.resize(buffer_size*2*depth);    
+    hrecv_buf.resize(buffer_size*2*depth);
+#endif    
 
-    std::vector<CommsRequest_t> fwd_req;   
+    std::vector<MpiCommsRequest_t> fwd_req;   
-    std::vector<CommsRequest_t> bwd_req;   
+    std::vector<MpiCommsRequest_t> bwd_req;   
 
     int words = buffer_size;
     int bytes = words * sizeof(vobj);
@@ -495,9 +501,16 @@ public:
       t_gather+=usecond()-t;
 
       t=usecond();
+#ifdef ACCELERATOR_AWARE_MPI
       grid->SendToRecvFromBegin(fwd_req,
 				(void *)&send_buf[d*buffer_size], xmit_to_rank,
 				(void *)&recv_buf[d*buffer_size], recv_from_rank, bytes, tag);
+#else
+      acceleratorCopyFromDevice(&send_buf[d*buffer_size],&hsend_buf[d*buffer_size],bytes);
+      grid->SendToRecvFromBegin(fwd_req,
+				(void *)&hsend_buf[d*buffer_size], xmit_to_rank,
+				(void *)&hrecv_buf[d*buffer_size], recv_from_rank, bytes, tag);
+#endif
       t_comms+=usecond()-t;
      }
     for ( int d=0;d < depth ; d ++ ) {
@@ -508,9 +521,16 @@ public:
       t_gather+= usecond() - t;
 
       t=usecond();
+#ifdef ACCELERATOR_AWARE_MPI
       grid->SendToRecvFromBegin(bwd_req,
 				(void *)&send_buf[(d+depth)*buffer_size], recv_from_rank,
 				(void *)&recv_buf[(d+depth)*buffer_size], xmit_to_rank, bytes,tag);
+#else
+      acceleratorCopyFromDevice(&send_buf[(d+depth)*buffer_size],&hsend_buf[(d+depth)*buffer_size],bytes);
+      grid->SendToRecvFromBegin(bwd_req,
+				(void *)&hsend_buf[(d+depth)*buffer_size], recv_from_rank,
+				(void *)&hrecv_buf[(d+depth)*buffer_size], xmit_to_rank, bytes,tag);
+#endif      
       t_comms+=usecond()-t;
     }
 
@@ -533,8 +553,13 @@ public:
 
     t=usecond();
     grid->CommsComplete(fwd_req);
+#ifndef ACCELERATOR_AWARE_MPI
+    for ( int d=0;d < depth ; d ++ ) {
+      acceleratorCopyToDevice(&hrecv_buf[d*buffer_size],&recv_buf[d*buffer_size],bytes);
+    }
+#endif
     t_comms+= usecond() - t;
-
+    
     t=usecond();
     for ( int d=0;d < depth ; d ++ ) {
       ScatterSlice(recv_buf,to,nld-depth+d,dimension,plane*buffer_size); plane++;
@@ -543,6 +568,11 @@ public:
 
     t=usecond();
     grid->CommsComplete(bwd_req);
+#ifndef ACCELERATOR_AWARE_MPI
+    for ( int d=0;d < depth ; d ++ ) {
+      acceleratorCopyToDevice(&hrecv_buf[(d+depth)*buffer_size],&recv_buf[(d+depth)*buffer_size],bytes);
+    }
+#endif
     t_comms+= usecond() - t;
     
     t=usecond();

Grid/qcd/action/ActionBase.h

@@ -98,7 +98,7 @@ public:
   virtual RealD S(const GaugeField& U) = 0;                             // evaluate the action
   virtual RealD Sinitial(const GaugeField& U) { return this->S(U); } ;  // if the refresh computes the action, can cache it. Alternately refreshAndAction() ?
   virtual void deriv(const GaugeField& U, GaugeField& dSdU) = 0;        // evaluate the action derivative
-
+ 
   /////////////////////////////////////////////////////////////
   // virtual smeared interface through configuration container
   /////////////////////////////////////////////////////////////
@@ -132,6 +132,10 @@ public:
 template <class GaugeField >
 class EmptyAction : public Action <GaugeField>
 {
+  using Action<GaugeField>::refresh;
+  using Action<GaugeField>::Sinitial;
+  using Action<GaugeField>::deriv;
+
   virtual void refresh(const GaugeField& U, GridSerialRNG &sRNG, GridParallelRNG& pRNG) { assert(0);}; // refresh pseudofermions
   virtual RealD S(const GaugeField& U) { return 0.0;};                             // evaluate the action
   virtual void deriv(const GaugeField& U, GaugeField& dSdU) { assert(0); };        // evaluate the action derivative

Grid/qcd/action/fermion/AbstractEOFAFermion.h

@@ -55,6 +55,11 @@ public:
   RealD alpha; // Mobius scale
   RealD k;     // EOFA normalization constant
 
+  // Device resident
+  deviceVector<Coeff_t> d_shift_coefficients;
+  deviceVector<Coeff_t> d_MooeeInv_shift_lc;
+  deviceVector<Coeff_t> d_MooeeInv_shift_norm;
+  
   virtual void Instantiatable(void) = 0;
 
   // EOFA-specific operations
@@ -92,6 +97,11 @@ public:
     this->k = this->alpha * (_mq3-_mq2) * std::pow(this->alpha+1.0,2*Ls) /
       ( std::pow(this->alpha+1.0,Ls) + _mq2*std::pow(this->alpha-1.0,Ls) ) /
       ( std::pow(this->alpha+1.0,Ls) + _mq3*std::pow(this->alpha-1.0,Ls) );
+    
+    d_shift_coefficients.resize(Ls);
+    d_MooeeInv_shift_lc.resize(Ls);
+    d_MooeeInv_shift_norm.resize(Ls);
+
   };
 };
 

Grid/qcd/action/fermion/CayleyFermion5D.h

@@ -90,16 +90,16 @@ public:
   void M5D(const FermionField &psi,
 	   const FermionField &phi,
 	   FermionField &chi,
-	   Vector<Coeff_t> &lower,
+	   std::vector<Coeff_t> &lower,
-	   Vector<Coeff_t> &diag,
+	   std::vector<Coeff_t> &diag,
-	   Vector<Coeff_t> &upper);
+	   std::vector<Coeff_t> &upper);
 
   void M5Ddag(const FermionField &psi,
 	      const FermionField &phi,
 	      FermionField &chi,
-	      Vector<Coeff_t> &lower,
+	      std::vector<Coeff_t> &lower,
-	      Vector<Coeff_t> &diag,
+	      std::vector<Coeff_t> &diag,
-	      Vector<Coeff_t> &upper);
+	      std::vector<Coeff_t> &upper);
 
   virtual void   Instantiatable(void)=0;
 
@@ -119,35 +119,51 @@ public:
   RealD mass_plus, mass_minus;
 
   // Save arguments to SetCoefficientsInternal
-  Vector<Coeff_t> _gamma;
+  std::vector<Coeff_t> _gamma;
   RealD                _zolo_hi;
   RealD                _b;
   RealD                _c;
 
+  // possible boost
+  std::vector<ComplexD> qmu;
+  void set_qmu(std::vector<ComplexD> _qmu) { qmu=_qmu; assert(qmu.size()==Nd);};
+  void addQmu(const FermionField &in, FermionField &out, int dag);
+  
   // Cayley form Moebius (tanh and zolotarev)
-  Vector<Coeff_t> omega;
+  std::vector<Coeff_t> omega;
-  Vector<Coeff_t> bs;    // S dependent coeffs
+  std::vector<Coeff_t> bs;    // S dependent coeffs
-  Vector<Coeff_t> cs;
+  std::vector<Coeff_t> cs;
-  Vector<Coeff_t> as;
+  std::vector<Coeff_t> as;
   // For preconditioning Cayley form
-  Vector<Coeff_t> bee;
+  std::vector<Coeff_t> bee;
-  Vector<Coeff_t> cee;
+  std::vector<Coeff_t> cee;
-  Vector<Coeff_t> aee;
+  std::vector<Coeff_t> aee;
-  Vector<Coeff_t> beo;
+  std::vector<Coeff_t> beo;
-  Vector<Coeff_t> ceo;
+  std::vector<Coeff_t> ceo;
-  Vector<Coeff_t> aeo;
+  std::vector<Coeff_t> aeo;
   // LDU factorisation of the eeoo matrix
-  Vector<Coeff_t> lee;
+  std::vector<Coeff_t> lee;
-  Vector<Coeff_t> leem;
+  std::vector<Coeff_t> leem;
-  Vector<Coeff_t> uee;
+  std::vector<Coeff_t> uee;
-  Vector<Coeff_t> ueem;
+  std::vector<Coeff_t> ueem;
-  Vector<Coeff_t> dee;
+  std::vector<Coeff_t> dee;
+
+  // Device memory
+  deviceVector<Coeff_t> d_diag;
+  deviceVector<Coeff_t> d_upper;
+  deviceVector<Coeff_t> d_lower;
+
+  deviceVector<Coeff_t> d_lee;
+  deviceVector<Coeff_t> d_dee;
+  deviceVector<Coeff_t> d_uee;
+  deviceVector<Coeff_t> d_leem;
+  deviceVector<Coeff_t> d_ueem;
 
   // Matrices of 5d ee inverse params
-  Vector<iSinglet<Simd> >  MatpInv;
+  //  std::vector<iSinglet<Simd> >  MatpInv;
-  Vector<iSinglet<Simd> >  MatmInv;
+  //  std::vector<iSinglet<Simd> >  MatmInv;
-  Vector<iSinglet<Simd> >  MatpInvDag;
+  //  std::vector<iSinglet<Simd> >  MatpInvDag;
-  Vector<iSinglet<Simd> >  MatmInvDag;
+  //  std::vector<iSinglet<Simd> >  MatmInvDag;
 
   ///////////////////////////////////////////////////////////////
   // Conserved current utilities
@@ -187,7 +203,7 @@ public:
 protected:
   virtual void SetCoefficientsZolotarev(RealD zolohi,Approx::zolotarev_data *zdata,RealD b,RealD c);
   virtual void SetCoefficientsTanh(Approx::zolotarev_data *zdata,RealD b,RealD c);
-  virtual void SetCoefficientsInternal(RealD zolo_hi,Vector<Coeff_t> & gamma,RealD b,RealD c);
+  virtual void SetCoefficientsInternal(RealD zolo_hi,std::vector<Coeff_t> & gamma,RealD b,RealD c);
 };
 
 NAMESPACE_END(Grid);

Grid/qcd/action/fermion/CompactWilsonCloverFermion5D.h

@@ -0,0 +1,196 @@
+/*************************************************************************************
+
+    Grid physics library, www.github.com/paboyle/Grid
+
+    Source file: ./lib/qcd/action/fermion/CompactWilsonCloverFermion5D.h
+
+    Copyright (C) 2020 - 2025
+
+    Author: Daniel Richtmann <daniel.richtmann@gmail.com>
+    Author: Nils Meyer <nils.meyer@ur.de>
+    Author: Christoph Lehner <christoph@lhnr.de>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+    See the full license in the file "LICENSE" in the top level distribution directory
+    *************************************************************************************/
+/*  END LEGAL */
+
+#pragma once
+
+#include <Grid/qcd/action/fermion/WilsonFermion5D.h>
+#include <Grid/qcd/action/fermion/WilsonCloverTypes.h>
+#include <Grid/qcd/action/fermion/WilsonCloverHelpers.h>
+#include <Grid/qcd/action/fermion/CloverHelpers.h>
+
+NAMESPACE_BEGIN(Grid);
+
+// see Grid/qcd/action/fermion/CompactWilsonCloverFermion.h for description
+
+template<class Impl, class CloverHelpers>
+class CompactWilsonCloverFermion5D : public WilsonFermion5D<Impl>,
+				     public WilsonCloverHelpers<Impl>,
+				     public CompactWilsonCloverHelpers<Impl> {
+  /////////////////////////////////////////////
+  // Sizes
+  /////////////////////////////////////////////
+
+public:
+
+  INHERIT_COMPACT_CLOVER_SIZES(Impl);
+
+  /////////////////////////////////////////////
+  // Type definitions
+  /////////////////////////////////////////////
+
+public:
+
+  INHERIT_IMPL_TYPES(Impl);
+  INHERIT_CLOVER_TYPES(Impl);
+  INHERIT_COMPACT_CLOVER_TYPES(Impl);
+
+  typedef WilsonFermion5D<Impl>            WilsonBase;
+  typedef WilsonCloverHelpers<Impl>        Helpers;
+  typedef CompactWilsonCloverHelpers<Impl> CompactHelpers;
+
+  /////////////////////////////////////////////
+  // Constructors
+  /////////////////////////////////////////////
+
+public:
+
+  CompactWilsonCloverFermion5D(GaugeField& _Umu,
+			       GridCartesian         &FiveDimGrid,
+			       GridRedBlackCartesian &FiveDimRedBlackGrid,
+			       GridCartesian         &FourDimGrid,
+			       GridRedBlackCartesian &FourDimRedBlackGrid,
+			       const RealD _mass,
+			       const RealD _csw_r = 0.0,
+			       const RealD _csw_t = 0.0,
+			       const RealD _cF = 1.0,
+			       const ImplParams& impl_p = ImplParams());
+
+  /////////////////////////////////////////////
+  // Member functions (implementing interface)
+  /////////////////////////////////////////////
+
+public:
+
+  virtual void Instantiatable() {};
+  int          ConstEE()     override { return 0; };
+  int          isTrivialEE() override { return 0; };
+
+  void Dhop(const FermionField& in, FermionField& out, int dag) override;
+
+  void DhopOE(const FermionField& in, FermionField& out, int dag) override;
+
+  void DhopEO(const FermionField& in, FermionField& out, int dag) override;
+
+  void DhopDir(const FermionField& in, FermionField& out, int dir, int disp) override;
+
+  void DhopDirAll(const FermionField& in, std::vector<FermionField>& out) /* override */;
+
+  void M(const FermionField& in, FermionField& out) override;
+
+  void Mdag(const FermionField& in, FermionField& out) override;
+
+  void Meooe(const FermionField& in, FermionField& out) override;
+
+  void MeooeDag(const FermionField& in, FermionField& out) override;
+
+  void Mooee(const FermionField& in, FermionField& out) override;
+
+  void MooeeDag(const FermionField& in, FermionField& out) override;
+
+  void MooeeInv(const FermionField& in, FermionField& out) override;
+
+  void MooeeInvDag(const FermionField& in, FermionField& out) override;
+
+  void Mdir(const FermionField& in, FermionField& out, int dir, int disp) override;
+
+  void MdirAll(const FermionField& in, std::vector<FermionField>& out) override;
+
+  void MDeriv(GaugeField& force, const FermionField& X, const FermionField& Y, int dag) override;
+
+  void MooDeriv(GaugeField& mat, const FermionField& U, const FermionField& V, int dag) override;
+
+  void MeeDeriv(GaugeField& mat, const FermionField& U, const FermionField& V, int dag) override;
+
+  /////////////////////////////////////////////
+  // Member functions (internals)
+  /////////////////////////////////////////////
+
+  void MooeeInternal(const FermionField&        in,
+                     FermionField&              out,
+                     const CloverDiagonalField& diagonal,
+                     const CloverTriangleField& triangle);
+
+  /////////////////////////////////////////////
+  // Helpers
+  /////////////////////////////////////////////
+
+  void ImportGauge(const GaugeField& _Umu) override;
+
+  /////////////////////////////////////////////
+  // Helpers
+  /////////////////////////////////////////////
+
+private:
+
+  template<class Field>
+  const MaskField* getCorrectMaskField(const Field &in) const {
+    if(in.Grid()->_isCheckerBoarded) {
+      if(in.Checkerboard() == Odd) {
+        return &this->BoundaryMaskOdd;
+      } else {
+        return &this->BoundaryMaskEven;
+      }
+    } else {
+      return &this->BoundaryMask;
+    }
+  }
+
+  template<class Field>
+  void ApplyBoundaryMask(Field& f) {
+    const MaskField* m = getCorrectMaskField(f); assert(m != nullptr);
+    assert(m != nullptr);
+    CompactHelpers::ApplyBoundaryMask(f, *m);
+  }
+
+  /////////////////////////////////////////////
+  // Member Data
+  /////////////////////////////////////////////
+
+public:
+
+  RealD csw_r;
+  RealD csw_t;
+  RealD cF;
+  int n_rhs;
+  
+  bool fixedBoundaries;
+
+  CloverDiagonalField Diagonal,    DiagonalEven,    DiagonalOdd;
+  CloverDiagonalField DiagonalInv, DiagonalInvEven, DiagonalInvOdd;
+
+  CloverTriangleField Triangle,    TriangleEven,    TriangleOdd;
+  CloverTriangleField TriangleInv, TriangleInvEven, TriangleInvOdd;
+
+  FermionField Tmp;
+
+  MaskField BoundaryMask, BoundaryMaskEven, BoundaryMaskOdd;
+};
+
+NAMESPACE_END(Grid);

Grid/qcd/action/fermion/ContinuedFractionFermion5D.h

@@ -60,6 +60,50 @@ public:
   //      virtual void   Instantiatable(void)=0;
   virtual void   Instantiatable(void) =0;
 
+  void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary, std::vector<double> twist)
+  {
+    std::cout << "Free Propagator for PartialFraction"<<std::endl;
+    FermionField in_k(in.Grid());
+    FermionField prop_k(in.Grid());
+    
+    FFT theFFT((GridCartesian *) in.Grid());
+
+    //phase for boundary condition
+    ComplexField coor(in.Grid());
+    ComplexField ph(in.Grid());  ph = Zero();
+    FermionField in_buf(in.Grid()); in_buf = Zero();
+    typedef typename Simd::scalar_type Scalar;
+    Scalar ci(0.0,1.0);
+    assert(twist.size() == Nd);//check that twist is Nd
+    assert(boundary.size() == Nd);//check that boundary conditions is Nd
+    int shift = 0;
+    for(unsigned int nu = 0; nu < Nd; nu++)
+      {
+	// Shift coordinate lattice index by 1 to account for 5th dimension.
+	LatticeCoordinate(coor, nu + shift);
+	double boundary_phase = ::acos(real(boundary[nu]));
+	ph = ph + boundary_phase*coor*((1./(in.Grid()->_fdimensions[nu+shift])));
+	//momenta for propagator shifted by twist+boundary
+	twist[nu] = twist[nu] + boundary_phase/((2.0*M_PI));
+      }
+    in_buf = exp(ci*ph*(-1.0))*in;
+
+    theFFT.FFT_all_dim(in_k,in,FFT::forward);
+    this->MomentumSpacePropagatorHw(prop_k,in_k,mass,twist);
+    theFFT.FFT_all_dim(out,prop_k,FFT::backward);
+    
+    //phase for boundary condition
+    out = out * exp(ci*ph);
+  };
+
+  virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass) {
+    std::vector<double> twist(Nd,0.0); //default: periodic boundarys in all directions
+    std::vector<Complex> boundary;
+    for(int i=0;i<Nd;i++) boundary.push_back(1);//default: periodic boundary conditions
+    FreePropagator(in,out,mass,boundary,twist);
+  };
+
+  
   // Efficient support for multigrid coarsening
   virtual void  Mdir (const FermionField &in, FermionField &out,int dir,int disp);
   virtual void  MdirAll(const FermionField &in, std::vector<FermionField> &out);
@@ -90,12 +134,12 @@ protected:
   RealD mass;
   RealD R;
   RealD ZoloHiInv;
-  Vector<double> Beta;
+  std::vector<double> Beta;
-  Vector<double> cc;;
+  std::vector<double> cc;;
-  Vector<double> cc_d;;
+  std::vector<double> cc_d;;
-  Vector<double> sqrt_cc;
+  std::vector<double> sqrt_cc;
-  Vector<double> See;
+  std::vector<double> See;
-  Vector<double> Aee;
+  std::vector<double> Aee;
 
 };
 

Grid/qcd/action/fermion/DomainWallEOFAFermion.h

@@ -69,10 +69,10 @@ public:
   // Instantiate different versions depending on Impl
   /////////////////////////////////////////////////////
   void M5D(const FermionField& psi, const FermionField& phi, FermionField& chi,
-	   Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper);
+	   std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper);
 
   void M5Ddag(const FermionField& psi, const FermionField& phi, FermionField& chi,
-	      Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper);
+	      std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper);
 
   virtual void RefreshShiftCoefficients(RealD new_shift);
 
@@ -83,7 +83,7 @@ public:
 			RealD _M5, const ImplParams& p=ImplParams());
 
 protected:
-  void SetCoefficientsInternal(RealD zolo_hi, Vector<Coeff_t>& gamma, RealD b, RealD c);
+  void SetCoefficientsInternal(RealD zolo_hi, std::vector<Coeff_t>& gamma, RealD b, RealD c);
 };
 
 NAMESPACE_END(Grid);

Grid/qcd/action/fermion/Fermion.h

@@ -55,6 +55,7 @@ NAMESPACE_CHECK(Wilson);
 NAMESPACE_CHECK(WilsonTM);
 #include <Grid/qcd/action/fermion/WilsonCloverFermion.h> // 4d wilson clover fermions
 #include <Grid/qcd/action/fermion/CompactWilsonCloverFermion.h> // 4d compact wilson clover fermions
+#include <Grid/qcd/action/fermion/CompactWilsonCloverFermion5D.h> // 5d compact wilson clover fermions
 NAMESPACE_CHECK(WilsonClover);
 #include <Grid/qcd/action/fermion/WilsonFermion5D.h>     // 5d base used by all 5d overlap types
 NAMESPACE_CHECK(Wilson5D);
@@ -164,12 +165,17 @@ typedef WilsonClover<WilsonTwoIndexAntiSymmetricImplD> WilsonCloverTwoIndexAntiS
 
 // Compact Clover fermions
 template <typename WImpl> using CompactWilsonClover = CompactWilsonCloverFermion<WImpl, CompactCloverHelpers<WImpl>>;
+template <typename WImpl> using CompactWilsonClover5D = CompactWilsonCloverFermion5D<WImpl, CompactCloverHelpers<WImpl>>;
 template <typename WImpl> using CompactWilsonExpClover = CompactWilsonCloverFermion<WImpl, CompactExpCloverHelpers<WImpl>>;
 
 typedef CompactWilsonClover<WilsonImplD2> CompactWilsonCloverFermionD2;
 typedef CompactWilsonClover<WilsonImplF> CompactWilsonCloverFermionF;
 typedef CompactWilsonClover<WilsonImplD> CompactWilsonCloverFermionD;
 
+typedef CompactWilsonClover5D<WilsonImplD2> CompactWilsonCloverFermion5DD2;
+typedef CompactWilsonClover5D<WilsonImplF> CompactWilsonCloverFermion5DF;
+typedef CompactWilsonClover5D<WilsonImplD> CompactWilsonCloverFermion5DD;
+
 typedef CompactWilsonExpClover<WilsonImplD2> CompactWilsonExpCloverFermionD2;
 typedef CompactWilsonExpClover<WilsonImplF> CompactWilsonExpCloverFermionF;
 typedef CompactWilsonExpClover<WilsonImplD> CompactWilsonExpCloverFermionD;

Grid/qcd/action/fermion/ImprovedStaggeredFermion.h

@@ -102,11 +102,11 @@ public:
 		     GaugeField &mat, 
 		     const FermionField &A, const FermionField &B, int dag);
 
-  void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,DoubledGaugeField &UUU,
+  void DhopInternal(StencilImpl &st, DoubledGaugeField &U,DoubledGaugeField &UUU,
                     const FermionField &in, FermionField &out, int dag);
-  void DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,DoubledGaugeField &UUU,
+  void DhopInternalSerialComms(StencilImpl &st, DoubledGaugeField &U,DoubledGaugeField &UUU,
                     const FermionField &in, FermionField &out, int dag);
-  void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,DoubledGaugeField &UUU,
+  void DhopInternalOverlappedComms(StencilImpl &st, DoubledGaugeField &U,DoubledGaugeField &UUU,
                     const FermionField &in, FermionField &out, int dag);
 
   //////////////////////////////////////////////////////////////////////////
@@ -164,8 +164,6 @@ public:
   DoubledGaugeField UUUmuEven;
   DoubledGaugeField UUUmuOdd;
 
-  LebesgueOrder Lebesgue;
-  LebesgueOrder LebesgueEvenOdd;
   
   ///////////////////////////////////////////////////////////////
   // Conserved current utilities

Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h

@@ -100,7 +100,6 @@ public:
 		     int dag);
     
   void DhopInternal(StencilImpl & st,
-		    LebesgueOrder &lo,
 		    DoubledGaugeField &U,
 		    DoubledGaugeField &UUU,
 		    const FermionField &in, 
@@ -108,7 +107,6 @@ public:
 		    int dag);
     
     void DhopInternalOverlappedComms(StencilImpl & st,
-		      LebesgueOrder &lo,
 		      DoubledGaugeField &U,
 		      DoubledGaugeField &UUU,
 		      const FermionField &in, 
@@ -116,7 +114,6 @@ public:
 		      int dag);
 
     void DhopInternalSerialComms(StencilImpl & st,
-		      LebesgueOrder &lo,
 		      DoubledGaugeField &U,
 		      DoubledGaugeField &UUU,
 		      const FermionField &in, 
@@ -192,8 +189,6 @@ public:
   DoubledGaugeField UUUmuEven;
   DoubledGaugeField UUUmuOdd;
     
-  LebesgueOrder Lebesgue;
-  LebesgueOrder LebesgueEvenOdd;
     
   // Comms buffer
   //  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;

Grid/qcd/action/fermion/MobiusEOFAFermion.h

@@ -42,11 +42,11 @@ public:
 
 public:
   // Shift operator coefficients for red-black preconditioned Mobius EOFA
-  Vector<Coeff_t> Mooee_shift;
+  std::vector<Coeff_t> Mooee_shift;
-  Vector<Coeff_t> MooeeInv_shift_lc;
+  std::vector<Coeff_t> MooeeInv_shift_lc;
-  Vector<Coeff_t> MooeeInv_shift_norm;
+  std::vector<Coeff_t> MooeeInv_shift_norm;
-  Vector<Coeff_t> MooeeInvDag_shift_lc;
+  std::vector<Coeff_t> MooeeInvDag_shift_lc;
-  Vector<Coeff_t> MooeeInvDag_shift_norm;
+  std::vector<Coeff_t> MooeeInvDag_shift_norm;
 
   virtual void Instantiatable(void) {};
 
@@ -74,18 +74,18 @@ public:
   // Instantiate different versions depending on Impl
   /////////////////////////////////////////////////////
   void M5D(const FermionField& psi, const FermionField& phi, FermionField& chi,
-	   Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper);
+	   std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper);
 
   void M5D_shift(const FermionField& psi, const FermionField& phi, FermionField& chi,
-		 Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper,
+		 std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper,
-		 Vector<Coeff_t>& shift_coeffs);
+		 std::vector<Coeff_t>& shift_coeffs);
 
   void M5Ddag(const FermionField& psi, const FermionField& phi, FermionField& chi,
-	      Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper);
+	      std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper);
 
   void M5Ddag_shift(const FermionField& psi, const FermionField& phi, FermionField& chi,
-		    Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper,
+		    std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper,
-		    Vector<Coeff_t>& shift_coeffs);
+		    std::vector<Coeff_t>& shift_coeffs);
 
   virtual void RefreshShiftCoefficients(RealD new_shift);
 

Grid/qcd/action/fermion/NaiveStaggeredFermion.h

@@ -102,11 +102,11 @@ public:
 		     GaugeField &mat, 
 		     const FermionField &A, const FermionField &B, int dag);
 
-  void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternal(StencilImpl &st, DoubledGaugeField &U,
                     const FermionField &in, FermionField &out, int dag);
-  void DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternalSerialComms(StencilImpl &st, DoubledGaugeField &U,
 			       const FermionField &in, FermionField &out, int dag);
-  void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternalOverlappedComms(StencilImpl &st, DoubledGaugeField &U,
 				   const FermionField &in, FermionField &out, int dag);
 
   //////////////////////////////////////////////////////////////////////////
@@ -152,9 +152,6 @@ public:
   DoubledGaugeField UmuEven;
   DoubledGaugeField UmuOdd;
 
-  LebesgueOrder Lebesgue;
-  LebesgueOrder LebesgueEvenOdd;
-  
   ///////////////////////////////////////////////////////////////
   // Conserved current utilities
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/OverlapWilsonCayleyTanhFermion.h

@@ -42,7 +42,7 @@ public:
 
      void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
        this->MomentumSpacePropagatorHw(out,in,_m,twist);
-  };
+     };
 
   // Constructors
   OverlapWilsonCayleyTanhFermion(GaugeField &_Umu,

Grid/qcd/action/fermion/OverlapWilsonCayleyZolotarevFermion.h

@@ -41,6 +41,10 @@ public:
 public:
 
   // Constructors
+  virtual void   Instantiatable(void){};
+  void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
+    this->MomentumSpacePropagatorHw(out,in,_m,twist);
+  };
 
   OverlapWilsonCayleyZolotarevFermion(GaugeField &_Umu,
 				      GridCartesian         &FiveDimGrid,

Grid/qcd/action/fermion/OverlapWilsonContfracTanhFermion.h

@@ -41,6 +41,9 @@ public:
 public:
 
   virtual void   Instantiatable(void){};
+  void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
+    this->MomentumSpacePropagatorHw(out,in,_m,twist);
+  };
   // Constructors
   OverlapWilsonContFracTanhFermion(GaugeField &_Umu,
 				   GridCartesian         &FiveDimGrid,

Grid/qcd/action/fermion/OverlapWilsonContfracZolotarevFermion.h

@@ -40,6 +40,9 @@ public:
   INHERIT_IMPL_TYPES(Impl);
 
   virtual void   Instantiatable(void){};
+  void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
+    this->MomentumSpacePropagatorHw(out,in,_m,twist);
+  };
   // Constructors
   OverlapWilsonContFracZolotarevFermion(GaugeField &_Umu,
 					GridCartesian         &FiveDimGrid,

Grid/qcd/action/fermion/OverlapWilsonPartialFractionTanhFermion.h

@@ -41,6 +41,9 @@ public:
 public:
 
   virtual void   Instantiatable(void){};
+  void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
+    this->MomentumSpacePropagatorHw(out,in,_m,twist);
+  };
   // Constructors
   OverlapWilsonPartialFractionTanhFermion(GaugeField &_Umu,
 					  GridCartesian         &FiveDimGrid,

Grid/qcd/action/fermion/OverlapWilsonPartialFractionZolotarevFermion.h

@@ -40,6 +40,11 @@ public:
   INHERIT_IMPL_TYPES(Impl);
 
   virtual void   Instantiatable(void){};
+
+  void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) {
+    this->MomentumSpacePropagatorHw(out,in,_m,twist);
+  };
+
   // Constructors
   OverlapWilsonPartialFractionZolotarevFermion(GaugeField &_Umu,
 					       GridCartesian         &FiveDimGrid,

Grid/qcd/action/fermion/PartialFractionFermion5D.h

@@ -39,7 +39,7 @@ class PartialFractionFermion5D : public WilsonFermion5D<Impl>
 public:
   INHERIT_IMPL_TYPES(Impl);
 
-  const int part_frac_chroma_convention=1;
+  const int part_frac_chroma_convention=0;
 
   void   Meooe_internal(const FermionField &in, FermionField &out,int dag);
   void   Mooee_internal(const FermionField &in, FermionField &out,int dag);
@@ -83,19 +83,78 @@ public:
 			   GridRedBlackCartesian &FourDimRedBlackGrid,
 			   RealD _mass,RealD M5,const ImplParams &p= ImplParams());
 
+  PartialFractionFermion5D(GaugeField &_Umu,
+			   GridCartesian         &FiveDimGrid,
+			   GridRedBlackCartesian &FiveDimRedBlackGrid,
+			   GridCartesian         &FourDimGrid,
+			   GridRedBlackCartesian &FourDimRedBlackGrid,
+			   RealD _mass,RealD M5,std::vector<RealD> &_qmu,const ImplParams &p= ImplParams());
+
+  void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary, std::vector<double> twist)
+  {
+    std::cout << "Free Propagator for PartialFraction"<<std::endl;
+    FermionField in_k(in.Grid());
+    FermionField prop_k(in.Grid());
+    
+    FFT theFFT((GridCartesian *) in.Grid());
+
+    //phase for boundary condition
+    ComplexField coor(in.Grid());
+    ComplexField ph(in.Grid());  ph = Zero();
+    FermionField in_buf(in.Grid()); in_buf = Zero();
+    typedef typename Simd::scalar_type Scalar;
+    Scalar ci(0.0,1.0);
+    assert(twist.size() == Nd);//check that twist is Nd
+    assert(boundary.size() == Nd);//check that boundary conditions is Nd
+    int shift = 0;
+    for(unsigned int nu = 0; nu < Nd; nu++)
+      {
+	// Shift coordinate lattice index by 1 to account for 5th dimension.
+	LatticeCoordinate(coor, nu + shift);
+	double boundary_phase = ::acos(real(boundary[nu]));
+	ph = ph + boundary_phase*coor*((1./(in.Grid()->_fdimensions[nu+shift])));
+	//momenta for propagator shifted by twist+boundary
+	twist[nu] = twist[nu] + boundary_phase/((2.0*M_PI));
+      }
+    in_buf = exp(ci*ph*(-1.0))*in;
+
+    theFFT.FFT_all_dim(in_k,in,FFT::forward);
+    if ( this->qmu.size() ){
+      this->MomentumSpacePropagatorHwQ(prop_k,in_k,mass,twist,this->qmu);
+    } else {
+      this->MomentumSpacePropagatorHw(prop_k,in_k,mass,twist);
+    }
+    theFFT.FFT_all_dim(out,prop_k,FFT::backward);
+    
+    //phase for boundary condition
+    out = out * exp(ci*ph);
+  };
+
+  virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass) {
+    std::vector<double> twist(Nd,0.0); //default: periodic boundarys in all directions
+    std::vector<Complex> boundary;
+    for(int i=0;i<Nd;i++) boundary.push_back(1);//default: periodic boundary conditions
+    FreePropagator(in,out,mass,boundary,twist);
+  };
+
+  void set_qmu(std::vector<RealD> _qmu) { qmu=_qmu; assert(qmu.size()==Nd);};
+  void addQmu(const FermionField &in, FermionField &out, int dag);
+
 protected:
 
   virtual void SetCoefficientsTanh(Approx::zolotarev_data *zdata,RealD scale);
   virtual void SetCoefficientsZolotarev(RealD zolo_hi,Approx::zolotarev_data *zdata);
 
+  std::vector<RealD> qmu;
+
   // Part frac
   RealD mass;
   RealD dw_diag;
   RealD R;
   RealD amax;
   RealD scale;
-  Vector<double> p; 
+  std::vector<double> p; 
-  Vector<double> q;
+  std::vector<double> q;
 
 };
 

Grid/qcd/action/fermion/SchurDiagTwoKappa.h

@@ -35,7 +35,7 @@ template<class Matrix, class Field>
 class KappaSimilarityTransform {
 public:
   INHERIT_IMPL_TYPES(Matrix);
-  Vector<Coeff_t> kappa, kappaDag, kappaInv, kappaInvDag;
+  std::vector<Coeff_t> kappa, kappaDag, kappaInv, kappaInvDag;
 
   KappaSimilarityTransform (Matrix &zmob) {
     for (int i=0;i<(int)zmob.bs.size();i++) {

Grid/qcd/action/fermion/StaggeredKernels.h

@@ -49,10 +49,10 @@ template<class Impl> class StaggeredKernels : public FermionOperator<Impl> , pub
    
  public:
 
-  void DhopImproved(StencilImpl &st, LebesgueOrder &lo, 
+  void DhopImproved(StencilImpl &st,
 		    DoubledGaugeField &U, DoubledGaugeField &UUU, 
 		    const FermionField &in, FermionField &out, int dag, int interior,int exterior);
-  void DhopNaive(StencilImpl &st, LebesgueOrder &lo, 
+  void DhopNaive(StencilImpl &st,
 		 DoubledGaugeField &U,
 		 const FermionField &in, FermionField &out, int dag, int interior,int exterior);
   

Grid/qcd/action/fermion/WilsonCompressor.h

@@ -47,7 +47,7 @@ public:
   static int PartialCompressionFactor(GridBase *grid) { return 1;}
 #endif
   template<class vobj,class cobj,class compressor>
-  static void Gather_plane_simple (commVector<std::pair<int,int> >& table,
+  static void Gather_plane_simple (deviceVector<std::pair<int,int> >& table,
 				   const Lattice<vobj> &rhs,
 				   cobj *buffer,
 				   compressor &compress,
@@ -109,7 +109,7 @@ public:
   // Reorder the fifth dim to be s=Ls-1 , s=0, s=1,...,Ls-2.
   ////////////////////////////////////////////////////////////////////////////////////////////
   template<class vobj,class cobj,class compressor>
-  static void Gather_plane_exchange(commVector<std::pair<int,int> >& table,const Lattice<vobj> &rhs,
+  static void Gather_plane_exchange(deviceVector<std::pair<int,int> >& table,const Lattice<vobj> &rhs,
 				    std::vector<cobj *> pointers,int dimension,int plane,int cbmask,
 				    compressor &compress,int type,int partial)
   {
@@ -197,7 +197,7 @@ public:
 #endif
   
   template<class vobj,class cobj,class compressor>
-  static void Gather_plane_simple (commVector<std::pair<int,int> >& table,
+  static void Gather_plane_simple (deviceVector<std::pair<int,int> >& table,
 					 const Lattice<vobj> &rhs,
 					 cobj *buffer,
 					 compressor &compress,
@@ -208,7 +208,7 @@ public:
     else        FaceGatherSimple::Gather_plane_simple(table,rhs,buffer,compress,off,so,partial);
   }
   template<class vobj,class cobj,class compressor>
-  static void Gather_plane_exchange(commVector<std::pair<int,int> >& table,const Lattice<vobj> &rhs,
+  static void Gather_plane_exchange(deviceVector<std::pair<int,int> >& table,const Lattice<vobj> &rhs,
 				    std::vector<cobj *> pointers,int dimension,int plane,int cbmask,
 				    compressor &compress,int type,int partial)
   {
@@ -402,7 +402,6 @@ public:
 
   typedef CartesianStencil<vobj,cobj,Parameters> Base;
   typedef typename Base::View_type View_type;
-  typedef typename Base::StencilVector StencilVector;
 
   //  Vector<int> surface_list;
   WilsonStencil(GridBase *grid,
@@ -415,29 +414,6 @@ public:
     //    surface_list.resize(0);
     this->same_node.resize(npoints);
   };
-
-  /*
-  void BuildSurfaceList(int Ls,int vol4){
-
-    // find same node for SHM
-    // Here we know the distance is 1 for WilsonStencil
-    for(int point=0;point<this->_npoints;point++){
-      this->same_node[point] = this->SameNode(point);
-    }
-    
-    for(int site = 0 ;site< vol4;site++){
-      int local = 1;
-      for(int point=0;point<this->_npoints;point++){
-	if( (!this->GetNodeLocal(site*Ls,point)) && (!this->same_node[point]) ){ 
-	  local = 0;
-	}
-      }
-      if(local == 0) { 
-	surface_list.push_back(site);
-      }
-    }
-  }
-  */
   
   template < class compressor>
   void HaloExchangeOpt(const Lattice<vobj> &source,compressor &compress) 
@@ -508,6 +484,11 @@ public:
     this->face_table_computed=1;
     assert(this->u_comm_offset==this->_unified_buffer_size);
     accelerator_barrier();
+#ifdef NVLINK_GET
+    this->_grid->StencilBarrier(); // He can now get mu local gather, I can get his
+    // Synch shared memory on a single nodes; could use an asynchronous barrier here and defer check
+    // Or issue barrier AFTER the DMA is running
+#endif    
   }
 
 };

Grid/qcd/action/fermion/WilsonFermion.h

@@ -126,14 +126,17 @@ public:
   void DerivInternal(StencilImpl &st, DoubledGaugeField &U, GaugeField &mat,
                      const FermionField &A, const FermionField &B, int dag);
 
-  void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternal(StencilImpl &st,
+		    DoubledGaugeField &U,
                     const FermionField &in, FermionField &out, int dag);
 
-  void DhopInternalSerial(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternalSerial(StencilImpl &st,
-                    const FermionField &in, FermionField &out, int dag);
+			  DoubledGaugeField &U,
+			  const FermionField &in, FermionField &out, int dag);
 
-  void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
+  void DhopInternalOverlappedComms(StencilImpl &st,
-                    const FermionField &in, FermionField &out, int dag);
+				   DoubledGaugeField &U,
+				   const FermionField &in, FermionField &out, int dag);
 
   // Constructor
   WilsonFermion(GaugeField &_Umu, GridCartesian &Fgrid,
@@ -168,9 +171,6 @@ public:
   DoubledGaugeField UmuEven;
   DoubledGaugeField UmuOdd;
 
-  LebesgueOrder Lebesgue;
-  LebesgueOrder LebesgueEvenOdd;
-
   WilsonAnisotropyCoefficients anisotropyCoeff;
 
   ///////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/WilsonFermion5D.h

@@ -91,13 +91,13 @@ public:
   virtual void   Mdag (const FermionField &in, FermionField &out){assert(0);};
 
   // half checkerboard operations; leave unimplemented as abstract for now
-  virtual void   Meooe       (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   Meooe       (const FermionField &in, FermionField &out);
-  virtual void   Mooee       (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   Mooee       (const FermionField &in, FermionField &out);
-  virtual void   MooeeInv    (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   MooeeInv    (const FermionField &in, FermionField &out);
 
-  virtual void   MeooeDag    (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   MeooeDag    (const FermionField &in, FermionField &out);
-  virtual void   MooeeDag    (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   MooeeDag    (const FermionField &in, FermionField &out);
-  virtual void   MooeeInvDag (const FermionField &in, FermionField &out){assert(0);};
+  virtual void   MooeeInvDag (const FermionField &in, FermionField &out);
   virtual void   Mdir   (const FermionField &in, FermionField &out,int dir,int disp){assert(0);};   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
   virtual void   MdirAll(const FermionField &in, std::vector<FermionField> &out){assert(0);};   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
 
@@ -109,6 +109,8 @@ public:
   void MomentumSpacePropagatorHt_5d(FermionField &out,const FermionField &in,RealD mass,std::vector<double> twist) ;
   void MomentumSpacePropagatorHt(FermionField &out,const FermionField &in,RealD mass,std::vector<double> twist) ;
   void MomentumSpacePropagatorHw(FermionField &out,const FermionField &in,RealD mass,std::vector<double> twist) ;
+  void MomentumSpacePropagatorHwQ(FermionField &out,const FermionField &in,RealD mass,std::vector<double> twist,
+				  std::vector<double> qmu) ;
 
   // Implement hopping term non-hermitian hopping term; half cb or both
   // Implement s-diagonal DW
@@ -117,6 +119,9 @@ public:
   void DhopOE(const FermionField &in, FermionField &out,int dag);
   void DhopEO(const FermionField &in, FermionField &out,int dag);
 
+  void DhopComms  (const FermionField &in, FermionField &out);
+  void DhopCalc   (const FermionField &in, FermionField &out,uint64_t *ids);
+  
   // add a DhopComm
   // -- suboptimal interface will presently trigger multiple comms.
   void DhopDir(const FermionField &in, FermionField &out,int dir,int disp);
@@ -135,21 +140,18 @@ public:
 		     int dag);
     
   void DhopInternal(StencilImpl & st,
-		    LebesgueOrder &lo,
 		    DoubledGaugeField &U,
 		    const FermionField &in, 
 		    FermionField &out,
 		    int dag);
 
   void DhopInternalOverlappedComms(StencilImpl & st,
-				   LebesgueOrder &lo,
 				   DoubledGaugeField &U,
 				   const FermionField &in, 
 				   FermionField &out,
 				   int dag);
 
   void DhopInternalSerialComms(StencilImpl & st,
-			       LebesgueOrder &lo,
 			       DoubledGaugeField &U,
 			       const FermionField &in, 
 			       FermionField &out,
@@ -203,9 +205,6 @@ public:
   DoubledGaugeField UmuEven;
   DoubledGaugeField UmuOdd;
     
-  LebesgueOrder Lebesgue;
-  LebesgueOrder LebesgueEvenOdd;
-    
   // Comms buffer
   //  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;
 

Grid/qcd/action/fermion/WilsonKernels.h

@@ -57,6 +57,10 @@ public:
 			 int Ls, int Nsite, const FermionField &in, FermionField &out,
 			 int interior=1,int exterior=1) ;
 
+  static void DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField &U, SiteHalfSpinor * buf,
+			 int Ls, int Nsite, const FermionField &in, FermionField &out,
+			 uint64_t *ids);
+  
   static void DhopDagKernel(int Opt,StencilImpl &st,  DoubledGaugeField &U, SiteHalfSpinor * buf,
 			    int Ls, int Nsite, const FermionField &in, FermionField &out,
 			    int interior=1,int exterior=1) ;

Grid/qcd/action/fermion/ZMobiusFermion.h

@@ -58,7 +58,7 @@ public:
   {
     //    RealD eps = 1.0;
     std::cout<<GridLogMessage << "ZMobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" gamma passed in"<<std::endl;
-    Vector<Coeff_t> zgamma(this->Ls);
+    std::vector<Coeff_t> zgamma(this->Ls);
     for(int s=0;s<this->Ls;s++){
       zgamma[s] = gamma[s];
     }

Grid/qcd/action/fermion/deprecated/CayleyFermion5Dvec.h

@@ -1,3 +1,5 @@
+#if 0
+
 /*************************************************************************************
 
     Grid physics library, www.github.com/paboyle/Grid 
@@ -818,3 +820,5 @@ CayleyFermion5D<Impl>::MooeeInternal(const FermionField &psi, FermionField &chi,
 }
 
 NAMESPACE_END(Grid);
+
+#endif

Grid/qcd/action/fermion/deprecated/Lebesgue.cc

@@ -1,3 +1,4 @@
+#if 0
 /*************************************************************************************
 
     Grid physics library, www.github.com/paboyle/Grid 
@@ -241,3 +242,4 @@ void LebesgueOrder::ZGraph(void)
 }
 NAMESPACE_END(Grid);
 
+#endif

Grid/qcd/action/fermion/deprecated/Lebesgue.h

@@ -72,7 +72,7 @@ public:
   void ThreadInterleave(void);
 
 private:
-  Vector<IndexInteger> _LebesgueReorder;
+  deviceVector<IndexInteger> _LebesgueReorder;
 
 };    
 

Grid/qcd/action/fermion/implementation/CayleyFermion5DImplementation.h

@@ -48,7 +48,8 @@ CayleyFermion5D<Impl>::CayleyFermion5D(GaugeField &_Umu,
 			FourDimGrid,
 			FourDimRedBlackGrid,_M5,p),
   mass_plus(_mass), mass_minus(_mass)
-{ 
+{
+  // qmu defaults to zero size;
 }
 
 ///////////////////////////////////////////////////////////////
@@ -156,18 +157,18 @@ template<class Impl>
 void CayleyFermion5D<Impl>::M5D   (const FermionField &psi, FermionField &chi)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag (Ls,1.0);
+  std::vector<Coeff_t> diag (Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1]=mass_minus;
+  std::vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1]=mass_minus;
-  Vector<Coeff_t> lower(Ls,-1.0); lower[0]   =mass_plus;
+  std::vector<Coeff_t> lower(Ls,-1.0); lower[0]   =mass_plus;
   M5D(psi,chi,chi,lower,diag,upper);
 }
 template<class Impl>
 void CayleyFermion5D<Impl>::Meooe5D    (const FermionField &psi, FermionField &Din)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag = bs;
+  std::vector<Coeff_t> diag = bs;
-  Vector<Coeff_t> upper= cs;
+  std::vector<Coeff_t> upper= cs;
-  Vector<Coeff_t> lower= cs; 
+  std::vector<Coeff_t> lower= cs; 
   upper[Ls-1]=-mass_minus*upper[Ls-1];
   lower[0]   =-mass_plus*lower[0];
   M5D(psi,psi,Din,lower,diag,upper);
@@ -176,9 +177,9 @@ void CayleyFermion5D<Impl>::Meooe5D    (const FermionField &psi, FermionField &D
 template<class Impl> void CayleyFermion5D<Impl>::Meo5D     (const FermionField &psi, FermionField &chi)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag = beo;
+  std::vector<Coeff_t> diag = beo;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
   for(int i=0;i<Ls;i++) {
     upper[i]=-ceo[i];
     lower[i]=-ceo[i];
@@ -191,9 +192,9 @@ template<class Impl>
 void CayleyFermion5D<Impl>::Mooee       (const FermionField &psi, FermionField &chi)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag = bee;
+  std::vector<Coeff_t> diag = bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
   for(int i=0;i<Ls;i++) {
     upper[i]=-cee[i];
     lower[i]=-cee[i];
@@ -206,9 +207,9 @@ template<class Impl>
 void CayleyFermion5D<Impl>::MooeeDag    (const FermionField &psi, FermionField &chi)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag = bee;
+  std::vector<Coeff_t> diag = bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
 
   for (int s=0;s<Ls;s++){
     // Assemble the 5d matrix
@@ -236,9 +237,9 @@ template<class Impl>
 void CayleyFermion5D<Impl>::M5Ddag (const FermionField &psi, FermionField &chi)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag(Ls,1.0);
+  std::vector<Coeff_t> diag(Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0);
+  std::vector<Coeff_t> upper(Ls,-1.0);
-  Vector<Coeff_t> lower(Ls,-1.0);
+  std::vector<Coeff_t> lower(Ls,-1.0);
   upper[Ls-1]=-mass_plus*upper[Ls-1];
   lower[0]   =-mass_minus*lower[0];
   M5Ddag(psi,chi,chi,lower,diag,upper);
@@ -248,9 +249,9 @@ template<class Impl>
 void CayleyFermion5D<Impl>::MeooeDag5D    (const FermionField &psi, FermionField &Din)
 {
   int Ls=this->Ls;
-  Vector<Coeff_t> diag =bs;
+  std::vector<Coeff_t> diag =bs;
-  Vector<Coeff_t> upper=cs;
+  std::vector<Coeff_t> upper=cs;
-  Vector<Coeff_t> lower=cs; 
+  std::vector<Coeff_t> lower=cs; 
 
   for (int s=0;s<Ls;s++){
     if ( s== 0 ) {
@@ -270,6 +271,34 @@ void CayleyFermion5D<Impl>::MeooeDag5D    (const FermionField &psi, FermionField
   M5Ddag(psi,psi,Din,lower,diag,upper);
 }
 
+template<class Impl>
+void CayleyFermion5D<Impl>::addQmu(const FermionField &psi,FermionField &chi, int dag)
+{
+  if ( qmu.size() ) {
+
+    Gamma::Algebra Gmu [] = {
+      Gamma::Algebra::GammaX,
+      Gamma::Algebra::GammaY,
+      Gamma::Algebra::GammaZ,
+      Gamma::Algebra::GammaT
+    };
+    std::vector<ComplexD> coeff(Nd);
+    ComplexD ci(0,1);
+
+    assert(qmu.size()==Nd);
+
+    for(int mu=0;mu<Nd;mu++){
+       coeff[mu] = ci*qmu[mu];
+       if ( dag ) coeff[mu] = conjugate(coeff[mu]);
+    }
+
+    chi = chi + Gamma(Gmu[0])*psi*coeff[0];
+    for(int mu=1;mu<Nd;mu++){
+      chi = chi + Gamma(Gmu[mu])*psi*coeff[mu];
+    }
+  }
+}
+
 template<class Impl>
 void CayleyFermion5D<Impl>::M    (const FermionField &psi, FermionField &chi)
 {
@@ -277,8 +306,12 @@ void CayleyFermion5D<Impl>::M    (const FermionField &psi, FermionField &chi)
   
   // Assemble Din
   Meooe5D(psi,Din);
-  
+
   this->DW(Din,chi,DaggerNo);
+
+  // add i q_mu gamma_mu here
+  addQmu(Din,chi,DaggerNo);
+  
   // ((b D_W + D_w hop terms +1) on s-diag
   axpby(chi,1.0,1.0,chi,psi); 
   
@@ -295,6 +328,9 @@ void CayleyFermion5D<Impl>::Mdag (const FermionField &psi, FermionField &chi)
   FermionField Din(psi.Grid());
   // Apply Dw
   this->DW(psi,Din,DaggerYes); 
+
+  // add -i conj(q_mu) gamma_mu here ... if qmu is real, gammm_5 hermitian, otherwise not.
+  addQmu(psi,Din,DaggerYes);
   
   MeooeDag5D(Din,chi);
   
@@ -394,7 +430,7 @@ void CayleyFermion5D<Impl>::MeoDeriv(GaugeField &mat,const FermionField &U,const
 template<class Impl>
 void CayleyFermion5D<Impl>::SetCoefficientsTanh(Approx::zolotarev_data *zdata,RealD b,RealD c)
 {
-  Vector<Coeff_t> gamma(this->Ls);
+  std::vector<Coeff_t> gamma(this->Ls);
   for(int s=0;s<this->Ls;s++) gamma[s] = zdata->gamma[s];
   SetCoefficientsInternal(1.0,gamma,b,c);
 }
@@ -402,13 +438,13 @@ void CayleyFermion5D<Impl>::SetCoefficientsTanh(Approx::zolotarev_data *zdata,Re
 template<class Impl>
 void CayleyFermion5D<Impl>::SetCoefficientsZolotarev(RealD zolo_hi,Approx::zolotarev_data *zdata,RealD b,RealD c)
 {
-  Vector<Coeff_t> gamma(this->Ls);
+  std::vector<Coeff_t> gamma(this->Ls);
   for(int s=0;s<this->Ls;s++) gamma[s] = zdata->gamma[s];
   SetCoefficientsInternal(zolo_hi,gamma,b,c);
 }
 //Zolo
 template<class Impl>
-void CayleyFermion5D<Impl>::SetCoefficientsInternal(RealD zolo_hi,Vector<Coeff_t> & gamma,RealD b,RealD c)
+void CayleyFermion5D<Impl>::SetCoefficientsInternal(RealD zolo_hi,std::vector<Coeff_t> & gamma,RealD b,RealD c)
 {
   int Ls=this->Ls;
 
@@ -488,7 +524,7 @@ void CayleyFermion5D<Impl>::SetCoefficientsInternal(RealD zolo_hi,Vector<Coeff_t
   leem.resize(Ls);
   uee.resize(Ls);
   ueem.resize(Ls);
-  
+
   for(int i=0;i<Ls;i++){
     
     dee[i] = bee[i];
@@ -529,6 +565,18 @@ void CayleyFermion5D<Impl>::SetCoefficientsInternal(RealD zolo_hi,Vector<Coeff_t
     dee[Ls-1] += delta_d;
   }  
 
+  //////////////////////////////////////////
+  // Device buffers
+  //////////////////////////////////////////
+  d_diag.resize(Ls);
+  d_upper.resize(Ls);
+  d_lower.resize(Ls);
+
+  d_dee.resize(Ls);
+  d_lee.resize(Ls);
+  d_uee.resize(Ls);
+  d_leem.resize(Ls);
+  d_ueem.resize(Ls);
   //  int inv=1;
   //  this->MooeeInternalCompute(0,inv,MatpInv,MatmInv);
   //  this->MooeeInternalCompute(1,inv,MatpInvDag,MatmInvDag);

Grid/qcd/action/fermion/implementation/CayleyFermion5Dcache.h

@@ -43,9 +43,9 @@ void
 CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
 			       const FermionField &phi_i, 
 			       FermionField &chi_i,
-			       Vector<Coeff_t> &lower,
+			       std::vector<Coeff_t> &lower,
-			       Vector<Coeff_t> &diag,
+			       std::vector<Coeff_t> &diag,
-			       Vector<Coeff_t> &upper)
+			       std::vector<Coeff_t> &upper)
 {
   
   chi_i.Checkerboard()=psi_i.Checkerboard();
@@ -55,12 +55,16 @@ CayleyFermion5D<Impl>::M5D(const FermionField &psi_i,
   autoView(chi , chi_i,AcceleratorWrite);
   assert(phi.Checkerboard() == psi.Checkerboard());
 
-  auto pdiag = &diag[0];
-  auto pupper = &upper[0];
-  auto plower = &lower[0];
-
   int Ls =this->Ls;
 
+  acceleratorCopyToDevice(&diag[0] ,&this->d_diag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&this->d_upper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&this->d_lower[0],Ls*sizeof(Coeff_t));
+  
+  auto pdiag = &d_diag[0];
+  auto pupper = &d_upper[0];
+  auto plower = &d_lower[0];
+
   // 10 = 3 complex mult + 2 complex add
   // Flops = 10.0*(Nc*Ns) *Ls*vol (/2 for red black counting)
   uint64_t nloop = grid->oSites();
@@ -82,9 +86,9 @@ void
 CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
 			      const FermionField &phi_i, 
 			      FermionField &chi_i,
-			      Vector<Coeff_t> &lower,
+			      std::vector<Coeff_t> &lower,
-			      Vector<Coeff_t> &diag,
+			      std::vector<Coeff_t> &diag,
-			      Vector<Coeff_t> &upper)
+			      std::vector<Coeff_t> &upper)
 {
   chi_i.Checkerboard()=psi_i.Checkerboard();
   GridBase *grid=psi_i.Grid();
@@ -93,12 +97,16 @@ CayleyFermion5D<Impl>::M5Ddag(const FermionField &psi_i,
   autoView(chi , chi_i,AcceleratorWrite);
   assert(phi.Checkerboard() == psi.Checkerboard());
 
-  auto pdiag = &diag[0];
-  auto pupper = &upper[0];
-  auto plower = &lower[0];
-
   int Ls=this->Ls;
 
+  acceleratorCopyToDevice(&diag[0] ,&this->d_diag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&this->d_upper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&this->d_lower[0],Ls*sizeof(Coeff_t));
+  
+  auto pdiag = &d_diag[0];
+  auto pupper = &d_upper[0];
+  auto plower = &d_lower[0];
+
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   uint64_t nloop = grid->oSites();
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -126,11 +134,17 @@ CayleyFermion5D<Impl>::MooeeInv    (const FermionField &psi_i, FermionField &chi
 
   int Ls=this->Ls;
 
-  auto plee  = & lee [0];
+  acceleratorCopyToDevice(&lee[0],&d_lee[0],Ls*sizeof(Coeff_t));
-  auto pdee  = & dee [0];
+  acceleratorCopyToDevice(&dee[0],&d_dee[0],Ls*sizeof(Coeff_t));
-  auto puee  = & uee [0];
+  acceleratorCopyToDevice(&uee[0],&d_uee[0],Ls*sizeof(Coeff_t));
-  auto pleem = & leem[0];
+  acceleratorCopyToDevice(&leem[0],&d_leem[0],Ls*sizeof(Coeff_t));
-  auto pueem = & ueem[0];
+  acceleratorCopyToDevice(&ueem[0],&d_ueem[0],Ls*sizeof(Coeff_t));
+
+  auto plee  = & d_lee [0];
+  auto pdee  = & d_dee [0];
+  auto puee  = & d_uee [0];
+  auto pleem = & d_leem[0];
+  auto pueem = & d_ueem[0];
 
   uint64_t nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -182,11 +196,17 @@ CayleyFermion5D<Impl>::MooeeInvDag (const FermionField &psi_i, FermionField &chi
   autoView(psi , psi_i,AcceleratorRead);
   autoView(chi , chi_i,AcceleratorWrite);
 
-  auto plee  = & lee [0];
+  acceleratorCopyToDevice(&lee[0],&d_lee[0],Ls*sizeof(Coeff_t));
-  auto pdee  = & dee [0];
+  acceleratorCopyToDevice(&dee[0],&d_dee[0],Ls*sizeof(Coeff_t));
-  auto puee  = & uee [0];
+  acceleratorCopyToDevice(&uee[0],&d_uee[0],Ls*sizeof(Coeff_t));
-  auto pleem = & leem[0];
+  acceleratorCopyToDevice(&leem[0],&d_leem[0],Ls*sizeof(Coeff_t));
-  auto pueem = & ueem[0];
+  acceleratorCopyToDevice(&ueem[0],&d_ueem[0],Ls*sizeof(Coeff_t));
+
+  auto plee  = & d_lee [0];
+  auto pdee  = & d_dee [0];
+  auto puee  = & d_uee [0];
+  auto pleem = & d_leem[0];
+  auto pueem = & d_ueem[0];
 
   assert(psi.Checkerboard() == psi.Checkerboard());
 

Grid/qcd/action/fermion/implementation/CompactWilsonCloverFermion5DImplementation.h

@@ -0,0 +1,376 @@
+/*************************************************************************************
+
+    Grid physics library, www.github.com/paboyle/Grid
+
+    Source file: ./lib/qcd/action/fermion/CompactWilsonCloverFermion5DImplementation.h
+
+    Copyright (C) 2017 - 2025
+
+    Author: paboyle <paboyle@ph.ed.ac.uk>
+    Author: Guido Cossu <guido.cossu@ed.ac.uk>
+    Author: Daniel Richtmann <daniel.richtmann@gmail.com>
+    Author: Christoph Lehner <christoph@lhnr.de>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+    See the full license in the file "LICENSE" in the top level distribution directory
+    *************************************************************************************/
+/*  END LEGAL */
+
+#include <Grid/Grid.h>
+#include <Grid/qcd/spin/Dirac.h>
+#include <Grid/qcd/action/fermion/CompactWilsonCloverFermion5D.h>
+
+
+NAMESPACE_BEGIN(Grid);
+template<class Impl, class CloverHelpers>
+CompactWilsonCloverFermion5D<Impl, CloverHelpers>::CompactWilsonCloverFermion5D(GaugeField& _Umu,
+										GridCartesian         &FiveDimGrid,
+										GridRedBlackCartesian &FiveDimRedBlackGrid,
+										GridCartesian         &FourDimGrid,
+										GridRedBlackCartesian &FourDimRedBlackGrid,
+										const RealD _mass,
+										const RealD _csw_r,
+										const RealD _csw_t,
+										const RealD _cF,
+										const ImplParams& impl_p)
+  : WilsonBase(_Umu, FiveDimGrid, FiveDimRedBlackGrid, FourDimGrid, FourDimRedBlackGrid, _mass, impl_p)
+  , csw_r(_csw_r)
+  , csw_t(_csw_t)
+  , cF(_cF)
+  , fixedBoundaries(impl_p.boundary_phases[Nd-1] == 0.0)
+  , Diagonal(&FourDimGrid),        Triangle(&FourDimGrid)
+  , DiagonalEven(&FourDimRedBlackGrid),    TriangleEven(&FourDimRedBlackGrid)
+  , DiagonalOdd(&FourDimRedBlackGrid),     TriangleOdd(&FourDimRedBlackGrid)
+  , DiagonalInv(&FourDimGrid),     TriangleInv(&FourDimGrid)
+  , DiagonalInvEven(&FourDimRedBlackGrid), TriangleInvEven(&FourDimRedBlackGrid)
+  , DiagonalInvOdd(&FourDimRedBlackGrid),  TriangleInvOdd(&FourDimRedBlackGrid)
+  , Tmp(&FiveDimGrid)
+  , BoundaryMask(&FiveDimGrid)
+  , BoundaryMaskEven(&FiveDimRedBlackGrid), BoundaryMaskOdd(&FiveDimRedBlackGrid)
+{
+  assert(Nd == 4 && Nc == 3 && Ns == 4 && Impl::Dimension == 3);
+
+  csw_r *= 0.5;
+  csw_t *= 0.5;
+  //if (clover_anisotropy.isAnisotropic)
+  //  csw_r /= clover_anisotropy.xi_0;
+
+  ImportGauge(_Umu);
+  if (fixedBoundaries) {
+    this->BoundaryMaskEven.Checkerboard() = Even;
+    this->BoundaryMaskOdd.Checkerboard() = Odd;
+    CompactHelpers::SetupMasks(this->BoundaryMask, this->BoundaryMaskEven, this->BoundaryMaskOdd);
+  }
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::Dhop(const FermionField& in, FermionField& out, int dag) {
+  WilsonBase::Dhop(in, out, dag);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::DhopOE(const FermionField& in, FermionField& out, int dag) {
+  WilsonBase::DhopOE(in, out, dag);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::DhopEO(const FermionField& in, FermionField& out, int dag) {
+  WilsonBase::DhopEO(in, out, dag);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::DhopDir(const FermionField& in, FermionField& out, int dir, int disp) {
+  WilsonBase::DhopDir(in, out, dir, disp);
+  if(this->fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::DhopDirAll(const FermionField& in, std::vector<FermionField>& out) {
+  WilsonBase::DhopDirAll(in, out);
+  if(this->fixedBoundaries) {
+    for(auto& o : out) ApplyBoundaryMask(o);
+  }
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::M(const FermionField& in, FermionField& out) {
+  out.Checkerboard() = in.Checkerboard();
+  WilsonBase::Dhop(in, out, DaggerNo); // call base to save applying bc
+  Mooee(in, Tmp);
+  axpy(out, 1.0, out, Tmp);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::Mdag(const FermionField& in, FermionField& out) {
+  out.Checkerboard() = in.Checkerboard();
+  WilsonBase::Dhop(in, out, DaggerYes);  // call base to save applying bc
+  MooeeDag(in, Tmp);
+  axpy(out, 1.0, out, Tmp);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::Meooe(const FermionField& in, FermionField& out) {
+  WilsonBase::Meooe(in, out);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MeooeDag(const FermionField& in, FermionField& out) {
+  WilsonBase::MeooeDag(in, out);
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::Mooee(const FermionField& in, FermionField& out) {
+  if(in.Grid()->_isCheckerBoarded) {
+    if(in.Checkerboard() == Odd) {
+      MooeeInternal(in, out, DiagonalOdd, TriangleOdd);
+    } else {
+      MooeeInternal(in, out, DiagonalEven, TriangleEven);
+    }
+  } else {
+    MooeeInternal(in, out, Diagonal, Triangle);
+  }
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MooeeDag(const FermionField& in, FermionField& out) {
+  Mooee(in, out); // blocks are hermitian
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MooeeInv(const FermionField& in, FermionField& out) {
+  if(in.Grid()->_isCheckerBoarded) {
+    if(in.Checkerboard() == Odd) {
+      MooeeInternal(in, out, DiagonalInvOdd, TriangleInvOdd);
+    } else {
+      MooeeInternal(in, out, DiagonalInvEven, TriangleInvEven);
+    }
+  } else {
+    MooeeInternal(in, out, DiagonalInv, TriangleInv);
+  }
+  if(fixedBoundaries) ApplyBoundaryMask(out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MooeeInvDag(const FermionField& in, FermionField& out) {
+  MooeeInv(in, out); // blocks are hermitian
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::Mdir(const FermionField& in, FermionField& out, int dir, int disp) {
+  DhopDir(in, out, dir, disp);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MdirAll(const FermionField& in, std::vector<FermionField>& out) {
+  DhopDirAll(in, out);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MDeriv(GaugeField& force, const FermionField& X, const FermionField& Y, int dag) {
+  assert(!fixedBoundaries); // TODO check for changes required for open bc
+
+  // NOTE: code copied from original clover term
+  conformable(X.Grid(), Y.Grid());
+  conformable(X.Grid(), force.Grid());
+  GaugeLinkField force_mu(force.Grid()), lambda(force.Grid());
+  GaugeField clover_force(force.Grid());
+  PropagatorField Lambda(force.Grid());
+
+  // Guido: Here we are hitting some performance issues:
+  // need to extract the components of the DoubledGaugeField
+  // for each call
+  // Possible solution
+  // Create a vector object to store them? (cons: wasting space)
+  std::vector<GaugeLinkField> U(Nd, this->Umu.Grid());
+
+  Impl::extractLinkField(U, this->Umu);
+
+  force = Zero();
+  // Derivative of the Wilson hopping term
+  this->DhopDeriv(force, X, Y, dag);
+
+  ///////////////////////////////////////////////////////////
+  // Clover term derivative
+  ///////////////////////////////////////////////////////////
+  Impl::outerProductImpl(Lambda, X, Y);
+  //std::cout << "Lambda:" << Lambda << std::endl;
+
+  Gamma::Algebra sigma[] = {
+      Gamma::Algebra::SigmaXY,
+      Gamma::Algebra::SigmaXZ,
+      Gamma::Algebra::SigmaXT,
+      Gamma::Algebra::MinusSigmaXY,
+      Gamma::Algebra::SigmaYZ,
+      Gamma::Algebra::SigmaYT,
+      Gamma::Algebra::MinusSigmaXZ,
+      Gamma::Algebra::MinusSigmaYZ,
+      Gamma::Algebra::SigmaZT,
+      Gamma::Algebra::MinusSigmaXT,
+      Gamma::Algebra::MinusSigmaYT,
+      Gamma::Algebra::MinusSigmaZT};
+
+  /*
+    sigma_{\mu \nu}=
+    | 0         sigma[0]  sigma[1]  sigma[2] |
+    | sigma[3]    0       sigma[4]  sigma[5] |
+    | sigma[6]  sigma[7]     0      sigma[8] |
+    | sigma[9]  sigma[10] sigma[11]   0      |
+  */
+
+  int count = 0;
+  clover_force = Zero();
+  for (int mu = 0; mu < 4; mu++)
+  {
+    force_mu = Zero();
+    for (int nu = 0; nu < 4; nu++)
+    {
+      if (mu == nu)
+        continue;
+
+      RealD factor;
+      if (nu == 4 || mu == 4)
+      {
+        factor = 2.0 * csw_t;
+      }
+      else
+      {
+        factor = 2.0 * csw_r;
+      }
+      PropagatorField Slambda = Gamma(sigma[count]) * Lambda; // sigma checked
+      Impl::TraceSpinImpl(lambda, Slambda);                   // traceSpin ok
+      force_mu -= factor*CloverHelpers::Cmunu(U, lambda, mu, nu);   // checked
+      count++;
+    }
+
+    pokeLorentz(clover_force, U[mu] * force_mu, mu);
+  }
+  //clover_force *= csw;
+  force += clover_force;
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MooDeriv(GaugeField& mat, const FermionField& U, const FermionField& V, int dag) {
+  assert(0);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MeeDeriv(GaugeField& mat, const FermionField& U, const FermionField& V, int dag) {
+  assert(0);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::MooeeInternal(const FermionField&        in,
+								      FermionField&              out,
+								      const CloverDiagonalField& diagonal,
+								      const CloverTriangleField& triangle) {
+  assert(in.Checkerboard() == Odd || in.Checkerboard() == Even);
+  out.Checkerboard() = in.Checkerboard();
+  conformable(in, out);
+  CompactHelpers::MooeeKernel(diagonal.oSites(), this->Ls, in, out, diagonal, triangle);
+}
+
+template<class Impl, class CloverHelpers>
+void CompactWilsonCloverFermion5D<Impl, CloverHelpers>::ImportGauge(const GaugeField& _Umu) {
+  // NOTE: parts copied from original implementation
+
+  // Import gauge into base class
+  double t0 = usecond();
+  WilsonBase::ImportGauge(_Umu); // NOTE: called here and in wilson constructor -> performed twice, but can't avoid that
+
+  // Initialize temporary variables
+  double t1 = usecond();
+  conformable(_Umu.Grid(), this->GaugeGrid());
+  GridBase* grid = _Umu.Grid();
+  typename Impl::GaugeLinkField Bx(grid), By(grid), Bz(grid), Ex(grid), Ey(grid), Ez(grid);
+  CloverField TmpOriginal(grid);
+  CloverField TmpInverse(grid);
+
+  // Compute the field strength terms mu>nu
+  double t2 = usecond();
+  WilsonLoops<Impl>::FieldStrength(Bx, _Umu, Zdir, Ydir);
+  WilsonLoops<Impl>::FieldStrength(By, _Umu, Zdir, Xdir);
+  WilsonLoops<Impl>::FieldStrength(Bz, _Umu, Ydir, Xdir);
+  WilsonLoops<Impl>::FieldStrength(Ex, _Umu, Tdir, Xdir);
+  WilsonLoops<Impl>::FieldStrength(Ey, _Umu, Tdir, Ydir);
+  WilsonLoops<Impl>::FieldStrength(Ez, _Umu, Tdir, Zdir);
+
+  // Compute the Clover Operator acting on Colour and Spin
+  // multiply here by the clover coefficients for the anisotropy
+  double t3 = usecond();
+  TmpOriginal  = Helpers::fillCloverYZ(Bx) * csw_r;
+  TmpOriginal += Helpers::fillCloverXZ(By) * csw_r;
+  TmpOriginal += Helpers::fillCloverXY(Bz) * csw_r;
+  TmpOriginal += Helpers::fillCloverXT(Ex) * csw_t;
+  TmpOriginal += Helpers::fillCloverYT(Ey) * csw_t;
+  TmpOriginal += Helpers::fillCloverZT(Ez) * csw_t;
+
+  // Instantiate the clover term
+  // - In case of the standard clover the mass term is added
+  // - In case of the exponential clover the clover term is exponentiated
+  double t4 = usecond();
+  CloverHelpers::InstantiateClover(TmpOriginal, TmpInverse, csw_t, 4.0 + this->M5 /*this->diag_mass*/);
+
+  // Convert the data layout of the clover term
+  double t5 = usecond();
+  CompactHelpers::ConvertLayout(TmpOriginal, Diagonal, Triangle);
+
+  // Modify the clover term at the temporal boundaries in case of open boundary conditions
+  double t6 = usecond();
+  if(fixedBoundaries) CompactHelpers::ModifyBoundaries(Diagonal, Triangle, csw_t, cF, 4.0 + this->M5 /*this->diag_mass*/);
+
+  // Invert the Clover term
+  // In case of the exponential clover with (anti-)periodic boundary conditions exp(-Clover) saved
+  // in TmpInverse can be used. In all other cases the clover term has to be explictly inverted.
+  // TODO: For now this inversion is explictly done on the CPU
+  double t7 = usecond();
+  CloverHelpers::InvertClover(TmpInverse, Diagonal, Triangle, DiagonalInv, TriangleInv, fixedBoundaries);
+
+  // Fill the remaining clover fields
+  double t8 = usecond();
+  pickCheckerboard(Even, DiagonalEven,    Diagonal);
+  pickCheckerboard(Even, TriangleEven,    Triangle);
+  pickCheckerboard(Odd,  DiagonalOdd,     Diagonal);
+  pickCheckerboard(Odd,  TriangleOdd,     Triangle);
+  pickCheckerboard(Even, DiagonalInvEven, DiagonalInv);
+  pickCheckerboard(Even, TriangleInvEven, TriangleInv);
+  pickCheckerboard(Odd,  DiagonalInvOdd,  DiagonalInv);
+  pickCheckerboard(Odd,  TriangleInvOdd,  TriangleInv);
+
+  // Report timings
+  double t9 = usecond();
+
+  std::cout << GridLogDebug << "CompactWilsonCloverFermion5D::ImportGauge timings:" << std::endl;
+  std::cout << GridLogDebug << "WilsonFermion::Importgauge = " << (t1 - t0) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "allocations =                " << (t2 - t1) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "field strength =             " << (t3 - t2) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "fill clover =                " << (t4 - t3) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "instantiate clover =         " << (t5 - t4) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "convert layout =             " << (t6 - t5) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "modify boundaries =          " << (t7 - t6) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "invert clover =              " << (t8 - t7) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "pick cbs =                   " << (t9 - t8) / 1e6 << std::endl;
+  std::cout << GridLogDebug << "total =                      " << (t9 - t0) / 1e6 << std::endl;
+}
+
+NAMESPACE_END(Grid);

Grid/qcd/action/fermion/implementation/ContinuedFractionFermion5DImplementation.h

@@ -42,13 +42,13 @@ template<class Impl>
 void ContinuedFractionFermion5D<Impl>::SetCoefficientsZolotarev(RealD zolo_hi,Approx::zolotarev_data *zdata)
 {
   // How to check Ls matches??
-  //      std::cout<<GridLogMessage << Ls << " Ls"<<std::endl;
+  std::cout<<GridLogMessage << zdata->n  << " - n"<<std::endl;
-  //      std::cout<<GridLogMessage << zdata->n  << " - n"<<std::endl;
+  std::cout<<GridLogMessage << zdata->da << " -da "<<std::endl;
-  //      std::cout<<GridLogMessage << zdata->da << " -da "<<std::endl;
+  std::cout<<GridLogMessage << zdata->db << " -db"<<std::endl;
-  //      std::cout<<GridLogMessage << zdata->db << " -db"<<std::endl;
+  std::cout<<GridLogMessage << zdata->dn << " -dn"<<std::endl;
-  //      std::cout<<GridLogMessage << zdata->dn << " -dn"<<std::endl;
+  std::cout<<GridLogMessage << zdata->dd << " -dd"<<std::endl;
-  //      std::cout<<GridLogMessage << zdata->dd << " -dd"<<std::endl;
   int Ls = this->Ls;
+  std::cout<<GridLogMessage << Ls << " Ls"<<std::endl;
   assert(zdata->db==Ls);// Beta has Ls coeffs
 
   R=(1+this->mass)/(1-this->mass);
@@ -320,7 +320,7 @@ ContinuedFractionFermion5D<Impl>::ContinuedFractionFermion5D(
       int Ls = this->Ls;
       conformable(solution5d.Grid(),this->FermionGrid());
       conformable(exported4d.Grid(),this->GaugeGrid());
-      ExtractSlice(exported4d, solution5d, Ls-1, Ls-1);
+      ExtractSlice(exported4d, solution5d, Ls-1, 0);
     }
     template<class Impl>
     void ContinuedFractionFermion5D<Impl>::ImportPhysicalFermionSource(const FermionField &input4d,FermionField &imported5d)
@@ -330,7 +330,7 @@ ContinuedFractionFermion5D<Impl>::ContinuedFractionFermion5D(
       conformable(input4d.Grid()   ,this->GaugeGrid());
       FermionField tmp(this->FermionGrid());
       tmp=Zero();
-      InsertSlice(input4d, tmp, Ls-1, Ls-1);
+      InsertSlice(input4d, tmp, Ls-1, 0);
       tmp=Gamma(Gamma::Algebra::Gamma5)*tmp;
       this->Dminus(tmp,imported5d);
     }

Grid/qcd/action/fermion/implementation/DomainWallEOFAFermionCache.h

@@ -41,7 +41,7 @@ NAMESPACE_BEGIN(Grid);
 // Pplus  backwards..
 template<class Impl>
 void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi_i, const FermionField& phi_i,FermionField& chi_i, 
-				      Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper)
+				      std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   int Ls = this->Ls;
@@ -50,9 +50,15 @@ void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi_i, const FermionFi
   autoView( psi , psi_i, AcceleratorRead);
   autoView( chi , chi_i, AcceleratorWrite);
   assert(phi.Checkerboard() == psi.Checkerboard());
-  auto pdiag = &diag[0];
+
-  auto pupper = &upper[0];
+  auto pdiag  = &this->d_diag[0];
-  auto plower = &lower[0];
+  auto pupper = &this->d_upper[0];
+  auto plower = &this->d_lower[0];
+
+  acceleratorCopyToDevice(&diag[0],&pdiag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
+
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   
   auto nloop=grid->oSites()/Ls;
@@ -73,7 +79,7 @@ void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi_i, const FermionFi
 
 template<class Impl>
 void DomainWallEOFAFermion<Impl>::M5Ddag(const FermionField& psi_i, const FermionField& phi_i, FermionField& chi_i, 
-					 Vector<Coeff_t>& lower, Vector<Coeff_t>& diag, Vector<Coeff_t>& upper)
+					 std::vector<Coeff_t>& lower, std::vector<Coeff_t>& diag, std::vector<Coeff_t>& upper)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   GridBase* grid = psi_i.Grid();
@@ -83,9 +89,14 @@ void DomainWallEOFAFermion<Impl>::M5Ddag(const FermionField& psi_i, const Fermio
   autoView( phi , phi_i, AcceleratorRead);
   autoView( chi , chi_i, AcceleratorWrite);
   assert(phi.Checkerboard() == psi.Checkerboard());
-  auto pdiag = &diag[0];
+  
-  auto pupper = &upper[0];
+  auto pdiag  = &this->d_diag[0];
-  auto plower = &lower[0];
+  auto pupper = &this->d_upper[0];
+  auto plower = &this->d_lower[0];
+
+  acceleratorCopyToDevice(&diag[0] ,&pdiag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
 
@@ -114,12 +125,17 @@ void DomainWallEOFAFermion<Impl>::MooeeInv(const FermionField& psi_i, FermionFie
   autoView( chi, chi_i, AcceleratorWrite);
   int Ls = this->Ls;
 
-  auto plee  = & this->lee[0];
+  auto plee  = & this->d_lee [0];
-  auto pdee  = & this->dee[0];
+  auto pdee  = & this->d_dee [0];
-  auto puee  = & this->uee[0];
+  auto puee  = & this->d_uee [0];
-
+  auto pleem = & this->d_leem[0];
-  auto pleem = & this->leem[0];
+  auto pueem = & this->d_ueem[0];
-  auto pueem = & this->ueem[0];
+  
+  acceleratorCopyToDevice(&this->lee[0],&plee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->dee[0],&pdee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->uee[0],&puee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->leem[0],&pleem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->ueem[0],&pueem[0],Ls*sizeof(Coeff_t));
 
   uint64_t nloop=grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{

Grid/qcd/action/fermion/implementation/DomainWallEOFAFermionImplementation.h

@@ -131,9 +131,9 @@ void DomainWallEOFAFermion<Impl>::M5D(const FermionField& psi, FermionField& chi
     else{ shiftm = -shift*(mq3-mq2); }
   }
 
-  Vector<Coeff_t> diag(Ls,1.0);
+  std::vector<Coeff_t> diag(Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1] = mq1 + shiftm;
+  std::vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1] = mq1 + shiftm;
-  Vector<Coeff_t> lower(Ls,-1.0); lower[0]    = mq1 + shiftp;
+  std::vector<Coeff_t> lower(Ls,-1.0); lower[0]    = mq1 + shiftp;
 
 #if(0)
   std::cout << GridLogMessage << "DomainWallEOFAFermion::M5D(FF&,FF&):" << std::endl;
@@ -168,9 +168,9 @@ void DomainWallEOFAFermion<Impl>::M5Ddag(const FermionField& psi, FermionField&
     else{ shiftm = -shift*(mq3-mq2); }
   }
 
-  Vector<Coeff_t> diag(Ls,1.0);
+  std::vector<Coeff_t> diag(Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1] = mq1 + shiftp;
+  std::vector<Coeff_t> upper(Ls,-1.0); upper[Ls-1] = mq1 + shiftp;
-  Vector<Coeff_t> lower(Ls,-1.0); lower[0]    = mq1 + shiftm;
+  std::vector<Coeff_t> lower(Ls,-1.0); lower[0]    = mq1 + shiftm;
 
   this->M5Ddag(psi, chi, chi, lower, diag, upper);
 }
@@ -181,9 +181,9 @@ void DomainWallEOFAFermion<Impl>::Mooee(const FermionField& psi, FermionField& c
 {
   int Ls = this->Ls;
 
-  Vector<Coeff_t> diag = this->bee;
+  std::vector<Coeff_t> diag = this->bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
 
   for(int s=0; s<Ls; s++){
     upper[s] = -this->cee[s];
@@ -200,9 +200,9 @@ void DomainWallEOFAFermion<Impl>::MooeeDag(const FermionField& psi, FermionField
 {
   int Ls = this->Ls;
 
-  Vector<Coeff_t> diag = this->bee;
+  std::vector<Coeff_t> diag = this->bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
 
   for(int s=0; s<Ls; s++){
     upper[s] = -this->cee[s];
@@ -218,7 +218,7 @@ void DomainWallEOFAFermion<Impl>::MooeeDag(const FermionField& psi, FermionField
 
 //Zolo
 template<class Impl>
-void DomainWallEOFAFermion<Impl>::SetCoefficientsInternal(RealD zolo_hi, Vector<Coeff_t>& gamma, RealD b, RealD c)
+void DomainWallEOFAFermion<Impl>::SetCoefficientsInternal(RealD zolo_hi, std::vector<Coeff_t>& gamma, RealD b, RealD c)
 {
   int   Ls    = this->Ls;
   int   pm    = this->pm;

Grid/qcd/action/fermion/implementation/ImprovedStaggeredFermion5DImplementation.h

@@ -61,8 +61,6 @@ ImprovedStaggeredFermion5D<Impl>::ImprovedStaggeredFermion5D(GridCartesian
   UUUmu(&FourDimGrid),
   UUUmuEven(&FourDimRedBlackGrid),
   UUUmuOdd(&FourDimRedBlackGrid),
-  Lebesgue(&FourDimGrid),
-  LebesgueEvenOdd(&FourDimRedBlackGrid),
   _tmp(&FiveDimRedBlackGrid)
 {
 
@@ -277,18 +275,18 @@ void ImprovedStaggeredFermion5D<Impl>::DhopDerivOE(GaugeField &mat,
 
 /*CHANGE */
 template<class Impl>
-void ImprovedStaggeredFermion5D<Impl>::DhopInternal(StencilImpl & st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion5D<Impl>::DhopInternal(StencilImpl & st, 
 						    DoubledGaugeField & U,DoubledGaugeField & UUU,
 						    const FermionField &in, FermionField &out,int dag)
 {
   if ( StaggeredKernelsStatic::Comms == StaggeredKernelsStatic::CommsAndCompute )
-    DhopInternalOverlappedComms(st,lo,U,UUU,in,out,dag);
+    DhopInternalOverlappedComms(st,U,UUU,in,out,dag);
   else
-    DhopInternalSerialComms(st,lo,U,UUU,in,out,dag);
+    DhopInternalSerialComms(st,U,UUU,in,out,dag);
 }
 
 template<class Impl>
-void ImprovedStaggeredFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, 
 								   DoubledGaugeField & U,DoubledGaugeField & UUU,
 								   const FermionField &in, FermionField &out,int dag)
 {
@@ -313,7 +311,7 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl &
   {
     int interior=1;
     int exterior=0;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 
   st.CommsMerge(compressor);
@@ -323,12 +321,12 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl &
   {
     int interior=0;
     int exterior=1;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 }
 
 template<class Impl>
-void ImprovedStaggeredFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, 
 						    DoubledGaugeField & U,DoubledGaugeField & UUU,
 						    const FermionField &in, FermionField &out,int dag)
 {
@@ -341,7 +339,7 @@ void ImprovedStaggeredFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st,
   {
     int interior=1;
     int exterior=1;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 }
 /*CHANGE END*/
@@ -357,7 +355,7 @@ void ImprovedStaggeredFermion5D<Impl>::DhopOE(const FermionField &in, FermionFie
   assert(in.Checkerboard()==Even);
   out.Checkerboard() = Odd;
 
-  DhopInternal(StencilEven,LebesgueEvenOdd,UmuOdd,UUUmuOdd,in,out,dag);
+  DhopInternal(StencilEven,UmuOdd,UUUmuOdd,in,out,dag);
 }
 template<class Impl>
 void ImprovedStaggeredFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int dag)
@@ -368,7 +366,7 @@ void ImprovedStaggeredFermion5D<Impl>::DhopEO(const FermionField &in, FermionFie
   assert(in.Checkerboard()==Odd);
   out.Checkerboard() = Even;
 
-  DhopInternal(StencilOdd,LebesgueEvenOdd,UmuEven,UUUmuEven,in,out,dag);
+  DhopInternal(StencilOdd,UmuEven,UUUmuEven,in,out,dag);
 }
 template<class Impl>
 void ImprovedStaggeredFermion5D<Impl>::Dhop(const FermionField &in, FermionField &out,int dag)
@@ -378,7 +376,7 @@ void ImprovedStaggeredFermion5D<Impl>::Dhop(const FermionField &in, FermionField
 
   out.Checkerboard() = in.Checkerboard();
 
-  DhopInternal(Stencil,Lebesgue,Umu,UUUmu,in,out,dag);
+  DhopInternal(Stencil,Umu,UUUmu,in,out,dag);
 }
 
 /////////////////////////////////////////////////////////////////////////

Grid/qcd/action/fermion/implementation/ImprovedStaggeredFermionImplementation.h

@@ -48,8 +48,6 @@ ImprovedStaggeredFermion<Impl>::ImprovedStaggeredFermion(GridCartesian &Fgrid, G
     StencilEven(&Hgrid, npoint, Even, directions, displacements,p),  // source is Even
     StencilOdd(&Hgrid, npoint, Odd, directions, displacements,p),  // source is Odd
     mass(_mass),
-    Lebesgue(_grid),
-    LebesgueEvenOdd(_cbgrid),
     Umu(&Fgrid),
     UmuEven(&Hgrid),
     UmuOdd(&Hgrid),
@@ -339,7 +337,7 @@ void ImprovedStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &
 
   out.Checkerboard() = in.Checkerboard();
 
-  DhopInternal(Stencil, Lebesgue, Umu, UUUmu, in, out, dag);
+  DhopInternal(Stencil, Umu, UUUmu, in, out, dag);
 }
 
 template <class Impl>
@@ -351,7 +349,7 @@ void ImprovedStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField
   assert(in.Checkerboard() == Even);
   out.Checkerboard() = Odd;
 
-  DhopInternal(StencilEven, LebesgueEvenOdd, UmuOdd, UUUmuOdd, in, out, dag);
+  DhopInternal(StencilEven, UmuOdd, UUUmuOdd, in, out, dag);
 }
 
 template <class Impl>
@@ -363,7 +361,7 @@ void ImprovedStaggeredFermion<Impl>::DhopEO(const FermionField &in, FermionField
   assert(in.Checkerboard() == Odd);
   out.Checkerboard() = Even;
 
-  DhopInternal(StencilOdd, LebesgueEvenOdd, UmuEven, UUUmuEven, in, out, dag);
+  DhopInternal(StencilOdd, UmuEven, UUUmuEven, in, out, dag);
 }
 
 template <class Impl>
@@ -394,19 +392,19 @@ void ImprovedStaggeredFermion<Impl>::DhopDir(const FermionField &in, FermionFiel
 
 
 template <class Impl>
-void ImprovedStaggeredFermion<Impl>::DhopInternal(StencilImpl &st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion<Impl>::DhopInternal(StencilImpl &st, 
 						  DoubledGaugeField &U,
 						  DoubledGaugeField &UUU,
 						  const FermionField &in,
 						  FermionField &out, int dag) 
 {
   if ( StaggeredKernelsStatic::Comms == StaggeredKernelsStatic::CommsAndCompute )
-    DhopInternalOverlappedComms(st,lo,U,UUU,in,out,dag);
+    DhopInternalOverlappedComms(st,U,UUU,in,out,dag);
   else
-    DhopInternalSerialComms(st,lo,U,UUU,in,out,dag);
+    DhopInternalSerialComms(st,U,UUU,in,out,dag);
 }
 template <class Impl>
-void ImprovedStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, 
 								 DoubledGaugeField &U,
 								 DoubledGaugeField &UUU,
 								 const FermionField &in,
@@ -429,7 +427,7 @@ void ImprovedStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st
   {
     int interior=1;
     int exterior=0;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 
   st.CommunicateComplete(requests);
@@ -440,13 +438,13 @@ void ImprovedStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st
   {
     int interior=0;
     int exterior=1;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 }
 
 
 template <class Impl>
-void ImprovedStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo,
+void ImprovedStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, 
 							     DoubledGaugeField &U,
 							     DoubledGaugeField &UUU,
 							     const FermionField &in,
@@ -460,7 +458,7 @@ void ImprovedStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, Le
   {
     int interior=1;
     int exterior=1;
-    Kernels::DhopImproved(st,lo,U,UUU,in,out,dag,interior,exterior);
+    Kernels::DhopImproved(st,U,UUU,in,out,dag,interior,exterior);
   }
 };
 

Grid/qcd/action/fermion/implementation/MobiusEOFAFermionCache.h

@@ -39,7 +39,7 @@ NAMESPACE_BEGIN(Grid);
  
 template<class Impl>
 void MobiusEOFAFermion<Impl>::M5D(const FermionField &psi_i, const FermionField &phi_i, FermionField &chi_i,
-				  Vector<Coeff_t> &lower, Vector<Coeff_t> &diag, Vector<Coeff_t> &upper)
+				  std::vector<Coeff_t> &lower, std::vector<Coeff_t> &diag, std::vector<Coeff_t> &upper)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   GridBase *grid = psi_i.Grid();
@@ -50,10 +50,14 @@ void MobiusEOFAFermion<Impl>::M5D(const FermionField &psi_i, const FermionField
 
   assert(phi.Checkerboard() == psi.Checkerboard());
 
-  auto pdiag = &diag[0];
+  auto pdiag  = &this->d_diag[0];
-  auto pupper = &upper[0];
+  auto pupper = &this->d_upper[0];
-  auto plower = &lower[0];
+  auto plower = &this->d_lower[0];
 
+  acceleratorCopyToDevice(&diag[0],&pdiag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
+  
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -74,8 +78,8 @@ void MobiusEOFAFermion<Impl>::M5D(const FermionField &psi_i, const FermionField
 
 template<class Impl>
 void MobiusEOFAFermion<Impl>::M5D_shift(const FermionField &psi_i, const FermionField &phi_i, FermionField &chi_i,
-					Vector<Coeff_t> &lower, Vector<Coeff_t> &diag, Vector<Coeff_t> &upper,
+					std::vector<Coeff_t> &lower, std::vector<Coeff_t> &diag, std::vector<Coeff_t> &upper,
-					Vector<Coeff_t> &shift_coeffs)
+					std::vector<Coeff_t> &shift_coeffs)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   GridBase *grid = psi_i.Grid();
@@ -86,13 +90,18 @@ void MobiusEOFAFermion<Impl>::M5D_shift(const FermionField &psi_i, const Fermion
 
   auto pm  = this->pm;
   int shift_s = (pm == 1) ? (Ls-1) : 0; // s-component modified by shift operator
-
+  
   assert(phi.Checkerboard() == psi.Checkerboard());
 
-  auto pdiag = &diag[0];
+  auto pdiag  = &this->d_diag[0];
-  auto pupper = &upper[0];
+  auto pupper = &this->d_upper[0];
-  auto plower = &lower[0];
+  auto plower = &this->d_lower[0];
-  auto pshift_coeffs = &shift_coeffs[0];
+  auto pshift_coeffs = &this->d_shift_coefficients[0];
+
+  acceleratorCopyToDevice(&diag[0],&pdiag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&shift_coeffs[0],&pshift_coeffs[0],Ls*sizeof(Coeff_t));
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   int nloop = grid->oSites()/Ls;
@@ -119,7 +128,7 @@ void MobiusEOFAFermion<Impl>::M5D_shift(const FermionField &psi_i, const Fermion
 
 template<class Impl>
 void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField &psi_i, const FermionField &phi_i, FermionField &chi_i,
-				     Vector<Coeff_t> &lower, Vector<Coeff_t> &diag, Vector<Coeff_t> &upper)
+				     std::vector<Coeff_t> &lower, std::vector<Coeff_t> &diag, std::vector<Coeff_t> &upper)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   GridBase *grid = psi_i.Grid();
@@ -129,10 +138,14 @@ void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField &psi_i, const FermionFie
   autoView(chi , chi_i, AcceleratorWrite);
 
   assert(phi.Checkerboard() == psi.Checkerboard());
+  
+  auto pdiag  = &this->d_diag[0];
+  auto pupper = &this->d_upper[0];
+  auto plower = &this->d_lower[0];
 
-  auto pdiag = &diag[0];
+  acceleratorCopyToDevice(&diag[0],&pdiag[0],Ls*sizeof(Coeff_t));
-  auto pupper = &upper[0];
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
-  auto plower = &lower[0];
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
 
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   int nloop = grid->oSites()/Ls;
@@ -154,8 +167,8 @@ void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField &psi_i, const FermionFie
 
 template<class Impl>
 void MobiusEOFAFermion<Impl>::M5Ddag_shift(const FermionField &psi_i, const FermionField &phi_i, FermionField &chi_i,
-					   Vector<Coeff_t> &lower, Vector<Coeff_t> &diag, Vector<Coeff_t> &upper,
+					   std::vector<Coeff_t> &lower, std::vector<Coeff_t> &diag, std::vector<Coeff_t> &upper,
-					   Vector<Coeff_t> &shift_coeffs)
+					   std::vector<Coeff_t> &shift_coeffs)
 {
   chi_i.Checkerboard() = psi_i.Checkerboard();
   GridBase *grid = psi_i.Grid();
@@ -167,11 +180,16 @@ void MobiusEOFAFermion<Impl>::M5Ddag_shift(const FermionField &psi_i, const Ferm
 
   assert(phi.Checkerboard() == psi.Checkerboard());
 
-  auto pdiag = &diag[0];
+  auto pdiag  = &this->d_diag[0];
-  auto pupper = &upper[0];
+  auto pupper = &this->d_upper[0];
-  auto plower = &lower[0];
+  auto plower = &this->d_lower[0];
-  auto pshift_coeffs = &shift_coeffs[0];
+  auto pshift_coeffs = &this->d_shift_coefficients[0];
 
+  acceleratorCopyToDevice(&diag[0],&pdiag[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&upper[0],&pupper[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&lower[0],&plower[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&shift_coeffs[0],&pshift_coeffs[0],Ls*sizeof(Coeff_t));
+  
   // Flops = 6.0*(Nc*Ns) *Ls*vol
   auto pm = this->pm;
 
@@ -212,11 +230,17 @@ void MobiusEOFAFermion<Impl>::MooeeInv(const FermionField &psi_i, FermionField &
   autoView(psi , psi_i, AcceleratorRead);
   autoView(chi , chi_i, AcceleratorWrite);
 
-  auto plee = & this->lee [0];
+  auto plee  = & this->d_lee [0];
-  auto pdee = & this->dee [0];
+  auto pdee  = & this->d_dee [0];
-  auto puee = & this->uee [0];
+  auto puee  = & this->d_uee [0];
-  auto pleem= & this->leem[0];
+  auto pleem = & this->d_leem[0];
-  auto pueem= & this->ueem[0];
+  auto pueem = & this->d_ueem[0];
+
+  acceleratorCopyToDevice(&this->lee[0],&plee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->dee[0],&pdee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->uee[0],&puee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->leem[0],&pleem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->ueem[0],&pueem[0],Ls*sizeof(Coeff_t));
 
   if(this->shift != 0.0){ MooeeInv_shift(psi_i,chi_i); return; }
 
@@ -268,14 +292,23 @@ void MobiusEOFAFermion<Impl>::MooeeInv_shift(const FermionField &psi_i, FermionF
   autoView(psi , psi_i, AcceleratorRead);
   autoView(chi , chi_i, AcceleratorWrite);
 
+  // Move into object and constructor
   auto pm = this->pm;
-  auto plee = & this->lee [0];
+  auto plee  = & this->d_lee [0];
-  auto pdee = & this->dee [0];
+  auto pdee  = & this->d_dee [0];
-  auto puee = & this->uee [0];
+  auto puee  = & this->d_uee [0];
-  auto pleem= & this->leem[0];
+  auto pleem = & this->d_leem[0];
-  auto pueem= & this->ueem[0];
+  auto pueem = & this->d_ueem[0];
-  auto pMooeeInv_shift_lc   = &MooeeInv_shift_lc[0];
+  auto pMooeeInv_shift_lc   = &this->d_MooeeInv_shift_lc[0];
-  auto pMooeeInv_shift_norm = &MooeeInv_shift_norm[0];
+  auto pMooeeInv_shift_norm = &this->d_MooeeInv_shift_norm[0];
+
+  acceleratorCopyToDevice(&this->lee[0],&plee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->dee[0],&pdee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->uee[0],&puee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->leem[0],&pleem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->ueem[0],&pueem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&MooeeInv_shift_lc[0],&pMooeeInv_shift_lc[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&MooeeInv_shift_norm[0],&pMooeeInv_shift_norm[0],Ls*sizeof(Coeff_t));
 
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -333,11 +366,17 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag(const FermionField &psi_i, FermionFiel
   autoView(psi , psi_i, AcceleratorRead);
   autoView(chi , chi_i, AcceleratorWrite);
 
-  auto plee = & this->lee [0];
+  auto plee  = &this->d_lee [0];
-  auto pdee = & this->dee [0];
+  auto pdee  = &this->d_dee [0];
-  auto puee = & this->uee [0];
+  auto puee  = &this->d_uee [0];
-  auto pleem= & this->leem[0];
+  auto pleem = &this->d_leem[0];
-  auto pueem= & this->ueem[0];
+  auto pueem = &this->d_ueem[0];
+
+  acceleratorCopyToDevice(&this->lee[0],&plee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->dee[0],&pdee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->uee[0],&puee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->leem[0],&pleem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->ueem[0],&pueem[0],Ls*sizeof(Coeff_t));
 
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{
@@ -387,13 +426,25 @@ void MobiusEOFAFermion<Impl>::MooeeInvDag_shift(const FermionField &psi_i, Fermi
   int Ls = this->Ls;
 
   auto pm = this->pm;
-  auto plee = & this->lee [0];
+  auto plee  = & this->d_lee [0];
-  auto pdee = & this->dee [0];
+  auto pdee  = & this->d_dee [0];
-  auto puee = & this->uee [0];
+  auto puee  = & this->d_uee [0];
-  auto pleem= & this->leem[0];
+  auto pleem = & this->d_leem[0];
-  auto pueem= & this->ueem[0];
+  auto pueem = & this->d_ueem[0];
-  auto pMooeeInvDag_shift_lc   = &MooeeInvDag_shift_lc[0];
+
-  auto pMooeeInvDag_shift_norm = &MooeeInvDag_shift_norm[0];
+  auto pMooeeInvDag_shift_lc   = &this->d_MooeeInv_shift_lc[0];
+  auto pMooeeInvDag_shift_norm = &this->d_MooeeInv_shift_norm[0];
+
+  acceleratorCopyToDevice(&this->lee[0],&plee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->dee[0],&pdee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->uee[0],&puee[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->leem[0],&pleem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&this->ueem[0],&pueem[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&MooeeInvDag_shift_lc[0],&pMooeeInvDag_shift_lc[0],Ls*sizeof(Coeff_t));
+  acceleratorCopyToDevice(&MooeeInvDag_shift_norm[0],&pMooeeInvDag_shift_norm[0],Ls*sizeof(Coeff_t));
+
+  //  auto pMooeeInvDag_shift_lc   = &MooeeInvDag_shift_lc[0];
+  //  auto pMooeeInvDag_shift_norm = &MooeeInvDag_shift_norm[0];
 
   int nloop = grid->oSites()/Ls;
   accelerator_for(sss,nloop,Simd::Nsimd(),{

Grid/qcd/action/fermion/implementation/MobiusEOFAFermionImplementation.h

@@ -196,9 +196,9 @@ void MobiusEOFAFermion<Impl>::M5D(const FermionField& psi, FermionField& chi)
 {
   int Ls = this->Ls;
 
-  Vector<Coeff_t> diag(Ls,1.0);
+  std::vector<Coeff_t> diag(Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0);  upper[Ls-1] = this->mq1;
+  std::vector<Coeff_t> upper(Ls,-1.0);  upper[Ls-1] = this->mq1;
-  Vector<Coeff_t> lower(Ls,-1.0);  lower[0]    = this->mq1;
+  std::vector<Coeff_t> lower(Ls,-1.0);  lower[0]    = this->mq1;
 
   // no shift term
   if(this->shift == 0.0){ this->M5D(psi, chi, chi, lower, diag, upper); }
@@ -212,9 +212,9 @@ void MobiusEOFAFermion<Impl>::M5Ddag(const FermionField& psi, FermionField& chi)
 {
   int Ls = this->Ls;
 
-  Vector<Coeff_t> diag(Ls,1.0);
+  std::vector<Coeff_t> diag(Ls,1.0);
-  Vector<Coeff_t> upper(Ls,-1.0);  upper[Ls-1] = this->mq1;
+  std::vector<Coeff_t> upper(Ls,-1.0);  upper[Ls-1] = this->mq1;
-  Vector<Coeff_t> lower(Ls,-1.0);  lower[0]    = this->mq1;
+  std::vector<Coeff_t> lower(Ls,-1.0);  lower[0]    = this->mq1;
 
   // no shift term
   if(this->shift == 0.0){ this->M5Ddag(psi, chi, chi, lower, diag, upper); }
@@ -230,9 +230,9 @@ void MobiusEOFAFermion<Impl>::Mooee(const FermionField& psi, FermionField& chi)
   int Ls = this->Ls;
 
   // coefficients of Mooee
-  Vector<Coeff_t> diag = this->bee;
+  std::vector<Coeff_t> diag = this->bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
   for(int s=0; s<Ls; s++){
     upper[s] = -this->cee[s];
     lower[s] = -this->cee[s];
@@ -253,9 +253,9 @@ void MobiusEOFAFermion<Impl>::MooeeDag(const FermionField& psi, FermionField& ch
   int Ls = this->Ls;
 
   // coefficients of MooeeDag
-  Vector<Coeff_t> diag = this->bee;
+  std::vector<Coeff_t> diag = this->bee;
-  Vector<Coeff_t> upper(Ls);
+  std::vector<Coeff_t> upper(Ls);
-  Vector<Coeff_t> lower(Ls);
+  std::vector<Coeff_t> lower(Ls);
   for(int s=0; s<Ls; s++){
     if(s==0) {
       upper[s] = -this->cee[s+1];
@@ -314,10 +314,10 @@ void MobiusEOFAFermion<Impl>::SetCoefficientsPrecondShiftOps()
   // Tridiagonal solve for MooeeInvDag_shift_lc
   {
     Coeff_t m(0.0);
-    Vector<Coeff_t> d = Mooee_shift;
+    std::vector<Coeff_t> d = Mooee_shift;
-    Vector<Coeff_t> u(Ls,0.0);
+    std::vector<Coeff_t> u(Ls,0.0);
-    Vector<Coeff_t> y(Ls,0.0);
+    std::vector<Coeff_t> y(Ls,0.0);
-    Vector<Coeff_t> q(Ls,0.0);
+    std::vector<Coeff_t> q(Ls,0.0);
     if(pm == 1){ u[0] = 1.0; }
     else{ u[Ls-1] = 1.0; }
 

Grid/qcd/action/fermion/implementation/NaiveStaggeredFermionImplementation.h

@@ -48,8 +48,6 @@ NaiveStaggeredFermion<Impl>::NaiveStaggeredFermion(GridCartesian &Fgrid, GridRed
     StencilEven(&Hgrid, npoint, Even, directions, displacements,p),  // source is Even
     StencilOdd(&Hgrid, npoint, Odd, directions, displacements,p),  // source is Odd
     mass(_mass),
-    Lebesgue(_grid),
-    LebesgueEvenOdd(_cbgrid),
     Umu(&Fgrid),
     UmuEven(&Hgrid),
     UmuOdd(&Hgrid),
@@ -268,7 +266,7 @@ void NaiveStaggeredFermion<Impl>::Dhop(const FermionField &in, FermionField &out
 
   out.Checkerboard() = in.Checkerboard();
 
-  DhopInternal(Stencil, Lebesgue, Umu, in, out, dag);
+  DhopInternal(Stencil, Umu, in, out, dag);
 }
 
 template <class Impl>
@@ -280,7 +278,7 @@ void NaiveStaggeredFermion<Impl>::DhopOE(const FermionField &in, FermionField &o
   assert(in.Checkerboard() == Even);
   out.Checkerboard() = Odd;
 
-  DhopInternal(StencilEven, LebesgueEvenOdd, UmuOdd, in, out, dag);
+  DhopInternal(StencilEven, UmuOdd, in, out, dag);
 }
 
 template <class Impl>
@@ -292,7 +290,7 @@ void NaiveStaggeredFermion<Impl>::DhopEO(const FermionField &in, FermionField &o
   assert(in.Checkerboard() == Odd);
   out.Checkerboard() = Even;
 
-  DhopInternal(StencilOdd, LebesgueEvenOdd, UmuEven, in, out, dag);
+  DhopInternal(StencilOdd, UmuEven, in, out, dag);
 }
 
 template <class Impl>
@@ -323,18 +321,18 @@ void NaiveStaggeredFermion<Impl>::DhopDir(const FermionField &in, FermionField &
 
 
 template <class Impl>
-void NaiveStaggeredFermion<Impl>::DhopInternal(StencilImpl &st, LebesgueOrder &lo,
+void NaiveStaggeredFermion<Impl>::DhopInternal(StencilImpl &st,
 					       DoubledGaugeField &U,
 					       const FermionField &in,
 					       FermionField &out, int dag) 
 {
   if ( StaggeredKernelsStatic::Comms == StaggeredKernelsStatic::CommsAndCompute )
-    DhopInternalOverlappedComms(st,lo,U,in,out,dag);
+    DhopInternalOverlappedComms(st,U,in,out,dag);
   else
-    DhopInternalSerialComms(st,lo,U,in,out,dag);
+    DhopInternalSerialComms(st,U,in,out,dag);
 }
 template <class Impl>
-void NaiveStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo,
+void NaiveStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st,
 							      DoubledGaugeField &U,
 							      const FermionField &in,
 							      FermionField &out, int dag) 
@@ -356,7 +354,7 @@ void NaiveStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, L
   {
     int interior=1;
     int exterior=0;
-    Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
+    Kernels::DhopNaive(st,U,in,out,dag,interior,exterior);
   }
 
   st.CommunicateComplete(requests);
@@ -367,12 +365,12 @@ void NaiveStaggeredFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, L
   {
     int interior=0;
     int exterior=1;
-    Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
+    Kernels::DhopNaive(st,U,in,out,dag,interior,exterior);
   }
 }
 
 template <class Impl>
-void NaiveStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo,
+void NaiveStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st,
 							  DoubledGaugeField &U,
 							  const FermionField &in,
 							  FermionField &out, int dag) 
@@ -385,7 +383,7 @@ void NaiveStaggeredFermion<Impl>::DhopInternalSerialComms(StencilImpl &st, Lebes
   {
     int interior=1;
     int exterior=1;
-    Kernels::DhopNaive(st,lo,U,in,out,dag,interior,exterior);
+    Kernels::DhopNaive(st,U,in,out,dag,interior,exterior);
   }
 };
 

Grid/qcd/action/fermion/implementation/PartialFractionFermion5DImplementation.h

@@ -237,7 +237,32 @@ void   PartialFractionFermion5D<Impl>::M_internal(const FermionField &psi, Fermi
   //           ( 0     -sqrt(p_i)*amax   |  2 R gamma_5 + p0/amax 2H
   //
 
-  this->DW(psi,D,DaggerNo); 
+  this->DW(psi,D,DaggerNo);
+
+  // DW - DW+iqslash
+  //  (g5 Dw)^dag = g5 Dw
+  //  (iqmu g5 gmu)^dag = (-i qmu gmu^dag g5^dag) = i qmu g5 gmu
+  if ( qmu.size() ) {
+
+    std::cout<< "Mat" << "qmu ("<<qmu[0]<<","<<qmu[1]<<","<<qmu[2]<<","<<qmu[3]<<")"<<std::endl;
+    assert(qmu.size()==Nd);
+
+    FermionField qslash_psi(psi.Grid());
+
+    Gamma::Algebra Gmu [] = {
+			     Gamma::Algebra::GammaX,
+			     Gamma::Algebra::GammaY,
+			     Gamma::Algebra::GammaZ,
+			     Gamma::Algebra::GammaT
+    };
+    qslash_psi = qmu[0]*(Gamma(Gmu[0])*psi);
+    for(int mu=1;mu<Nd;mu++){
+      qslash_psi = qslash_psi + qmu[mu]*(Gamma(Gmu[mu])*psi);
+    }
+    ComplexD ci(0.0,1.0);
+    qslash_psi = ci*qslash_psi ; // i qslash
+    D = D + qslash_psi;
+  }
 
   int nblock=(Ls-1)/2;
   for(int b=0;b<nblock;b++){
@@ -255,15 +280,55 @@ void   PartialFractionFermion5D<Impl>::M_internal(const FermionField &psi, Fermi
   }
 	
   {
+    // The 'conventional' Cayley overlap operator is
+    //
+    // Dov = (1+m)/2 + (1-m)/2 g5 sgn Hw
+    //
+    //
+    // With massless limit 1/2(1+g5 sgnHw)
+    //
+    // Luscher shows quite neatly that 1+g5 sgn Hw has tree level propagator i qslash +O(a^2)
+    //
+    // However, the conventional normalisation has both a leading order factor of 2 in Zq
+    // at tree level AND a mass dependent (1-m) that are convenient to absorb.
+    //
+    // In WilsonFermion5DImplementation.h, the tree level propagator for Hw is
+    //
+    // num = -i sin kmu gmu
+    //
+    // denom ( sqrt(sk^2 + (2shk^2 - 1)^2
+    //    b_k = sk2 - M5;
+    //     
+    //    w_k = sqrt(sk + b_k*b_k);
+    //
+    //    denom= ( w_k + b_k + mass*mass) ;
+    //
+    //    denom= one/denom;
+    //    out = num*denom;
+    //
+    // Chroma, and Grid define partial fraction via 4d operator
+    //
+    //   Dpf = 2/(1-m) x Dov = (1+m)/(1-m) + g5 sgn Hw
+    //
+    // Now since:
+    //
+    //      (1+m)/(1-m) = (1-m)/(1-m) + 2m/(1-m) = 1 + 2m/(1-m)
+    //
+    // This corresponds to a modified mass parameter
+    //
+    // It has an annoying 
+    //
+    // 
     double R=(1+this->mass)/(1-this->mass);
-    //R g5 psi[Ls] + p[0] H
+    //R g5 psi[Ls] + p[0] Hw
     ag5xpbg5y_ssp(chi,R*scale,psi,p[nblock]*scale/amax,D,Ls-1,Ls-1);
-	
+    
     for(int b=0;b<nblock;b++){
       int s = 2*b+1;
       double pp = p[nblock-1-b];
       axpby_ssp(chi,1.0,chi,-sqrt(amax*pp)*scale*sign,psi,Ls-1,s);
     }
+   
   }
 
 }
@@ -411,17 +476,18 @@ void  PartialFractionFermion5D<Impl>::SetCoefficientsZolotarev(RealD zolo_hi,App
       int Ls = this->Ls;
       conformable(solution5d.Grid(),this->FermionGrid());
       conformable(exported4d.Grid(),this->GaugeGrid());
-      ExtractSlice(exported4d, solution5d, Ls-1, Ls-1);
+      ExtractSlice(exported4d, solution5d, Ls-1, 0);
     }
     template<class Impl>
     void PartialFractionFermion5D<Impl>::ImportPhysicalFermionSource(const FermionField &input4d,FermionField &imported5d)
     {
+      //void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice, int orthog)
       int Ls = this->Ls;
       conformable(imported5d.Grid(),this->FermionGrid());
       conformable(input4d.Grid()   ,this->GaugeGrid());
       FermionField tmp(this->FermionGrid());
       tmp=Zero();
-      InsertSlice(input4d, tmp, Ls-1, Ls-1);
+      InsertSlice(input4d, tmp, Ls-1, 0);
       tmp=Gamma(Gamma::Algebra::Gamma5)*tmp;
       this->Dminus(tmp,imported5d);
     }
@@ -442,7 +508,7 @@ PartialFractionFermion5D<Impl>::PartialFractionFermion5D(GaugeField &_Umu,
 
 {
   int Ls = this->Ls;
-
+  qmu.resize(0);
   assert((Ls&0x1)==1); // Odd Ls required
   int nrational=Ls-1;
 
@@ -460,6 +526,22 @@ PartialFractionFermion5D<Impl>::PartialFractionFermion5D(GaugeField &_Umu,
   Approx::zolotarev_free(zdata);
 
 }
+template<class Impl>
+PartialFractionFermion5D<Impl>::PartialFractionFermion5D(GaugeField &_Umu,
+							 GridCartesian         &FiveDimGrid,
+							 GridRedBlackCartesian &FiveDimRedBlackGrid,
+							 GridCartesian         &FourDimGrid,
+							 GridRedBlackCartesian &FourDimRedBlackGrid,
+							 RealD _mass,RealD M5,
+							 std::vector<RealD> &_qmu,
+							 const ImplParams &p)
+  : PartialFractionFermion5D<Impl>(_Umu,
+			     FiveDimGrid,FiveDimRedBlackGrid,
+			     FourDimGrid,FourDimRedBlackGrid,
+			     _mass,M5,p)
+{
+  qmu=_qmu;
+}
 
 NAMESPACE_END(Grid);
 

Grid/qcd/action/fermion/implementation/StaggeredKernelsHand.h

@@ -375,23 +375,6 @@ void StaggeredKernels<Impl>::DhopSiteHandExt(StencilView &st,
   }
 }
 
-/*
-#define DHOP_SITE_HAND_INSTANTIATE(IMPL)				\
-  template void StaggeredKernels<IMPL>::DhopSiteHand(StencilImpl &st, LebesgueOrder &lo, \
-						     DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, \
-						     SiteSpinor *buf, int LLs, int sU, \
-						     const FermionFieldView &in, FermionFieldView &out, int dag); \
-									\
-  template void StaggeredKernels<IMPL>::DhopSiteHandInt(StencilImpl &st, LebesgueOrder &lo, \
-						     DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, \
-						     SiteSpinor *buf, int LLs, int sU, \
-						     const FermionFieldView &in, FermionFieldView &out, int dag); \
-									\
-  template void StaggeredKernels<IMPL>::DhopSiteHandExt(StencilImpl &st, LebesgueOrder &lo, \
-						     DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, \
-						     SiteSpinor *buf, int LLs, int sU, \
-						     const FermionFieldView &in, FermionFieldView &out, int dag); \
-*/
 #undef LOAD_CHI
 #undef HAND_DECLARATIONS
 

Grid/qcd/action/fermion/implementation/StaggeredKernelsImplementation.h

@@ -256,7 +256,7 @@ void StaggeredKernels<Impl>::DhopDirKernel(StencilImpl &st, DoubledGaugeFieldVie
   });
 
 template <class Impl> 
-void StaggeredKernels<Impl>::DhopImproved(StencilImpl &st, LebesgueOrder &lo, 
+void StaggeredKernels<Impl>::DhopImproved(StencilImpl &st, 
 					  DoubledGaugeField &U, DoubledGaugeField &UUU, 
 					  const FermionField &in, FermionField &out, int dag, int interior,int exterior)
 {
@@ -294,7 +294,7 @@ void StaggeredKernels<Impl>::DhopImproved(StencilImpl &st, LebesgueOrder &lo,
   assert(0 && " Kernel optimisation case not covered ");
 }
 template <class Impl> 
-void StaggeredKernels<Impl>::DhopNaive(StencilImpl &st, LebesgueOrder &lo, 
+void StaggeredKernels<Impl>::DhopNaive(StencilImpl &st, 
 				       DoubledGaugeField &U,
 				       const FermionField &in, FermionField &out, int dag, int interior,int exterior)
 {

Grid/qcd/action/fermion/implementation/WilsonFermion5DImplementation.h

@@ -14,6 +14,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 Author: Guido Cossu <guido.cossu@ed.ac.uk>
 Author: Andrew Lawson <andrew.lawson1991@gmail.com>
 Author: Vera Guelpers <V.M.Guelpers@soton.ac.uk>
+Author: Christoph Lehner <christoph@lhnr.de>
 
     This program is free software; you can redistribute it and/or modify
     it under the terms of the GNU General Public License as published by
@@ -58,15 +59,9 @@ WilsonFermion5D<Impl>::WilsonFermion5D(GaugeField &_Umu,
   Umu(_FourDimGrid),
   UmuEven(_FourDimRedBlackGrid),
   UmuOdd (_FourDimRedBlackGrid),
-  Lebesgue(_FourDimGrid),
-  LebesgueEvenOdd(_FourDimRedBlackGrid),
   _tmp(&FiveDimRedBlackGrid),
   Dirichlet(0)
 {
-  Stencil.lo     = &Lebesgue;
-  StencilEven.lo = &LebesgueEvenOdd;
-  StencilOdd.lo  = &LebesgueEvenOdd;
-  
   // some assertions
   assert(FiveDimGrid._ndimension==5);
   assert(FourDimGrid._ndimension==4);
@@ -305,19 +300,19 @@ void WilsonFermion5D<Impl>::DhopDerivOE(GaugeField &mat,
 }
 
 template<class Impl>
-void WilsonFermion5D<Impl>::DhopInternal(StencilImpl & st, LebesgueOrder &lo,
+void WilsonFermion5D<Impl>::DhopInternal(StencilImpl & st,
                                          DoubledGaugeField & U,
                                          const FermionField &in, FermionField &out,int dag)
 {
   if ( WilsonKernelsStatic::Comms == WilsonKernelsStatic::CommsAndCompute )
-    DhopInternalOverlappedComms(st,lo,U,in,out,dag);
+    DhopInternalOverlappedComms(st,U,in,out,dag);
   else 
-    DhopInternalSerialComms(st,lo,U,in,out,dag);
+    DhopInternalSerialComms(st,U,in,out,dag);
 }
 
 
 template<class Impl>
-void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, LebesgueOrder &lo,
+void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st,
 							DoubledGaugeField & U,
 							const FermionField &in, FermionField &out,int dag)
 {
@@ -331,22 +326,22 @@ void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, Lebesg
   // Start comms  // Gather intranode and extra node differentiated??
   /////////////////////////////
   {
+    //    std::cout << " WilsonFermion5D gather " <<std::endl;
     GRID_TRACE("Gather");
     st.HaloExchangeOptGather(in,compressor); // Put the barrier in the routine
   }
   
+  //  std::cout << " WilsonFermion5D Communicate Begin " <<std::endl;
   std::vector<std::vector<CommsRequest_t> > requests;
-  auto id=traceStart("Communicate overlapped");
-  st.CommunicateBegin(requests);
 
+#if 1
   /////////////////////////////
   // Overlap with comms
   /////////////////////////////
-  {
+  st.CommunicateBegin(requests);
-    GRID_TRACE("MergeSHM");
+  st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms 
-    st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms
+#endif
-  }
+
-      
   /////////////////////////////
   // do the compute interior
   /////////////////////////////
@@ -358,22 +353,35 @@ void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, Lebesg
     GRID_TRACE("DhopInterior");
     Kernels::DhopKernel   (Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,1,0);
   }
-
+  
+  //ifdef GRID_ACCELERATED
+#if 0
+  /////////////////////////////
+  // Overlap with comms -- on GPU the interior kernel call is nonblocking
+  /////////////////////////////
+  st.CommunicateBegin(requests);
+  st.CommsMergeSHM(compressor);// Could do this inside parallel region overlapped with comms
+#endif
+  
+  
   /////////////////////////////
   // Complete comms
   /////////////////////////////
+  //  std::cout << " WilsonFermion5D Comms Complete " <<std::endl;
   st.CommunicateComplete(requests);
-  traceStop(id);
+  //  traceStop(id);
 
   /////////////////////////////
   // do the compute exterior
   /////////////////////////////
   {
+    //    std::cout << " WilsonFermion5D Comms Merge " <<std::endl;
     GRID_TRACE("Merge");
     st.CommsMerge(compressor);
   }
   
 
+  //  std::cout << " WilsonFermion5D Exterior " <<std::endl;
   if (dag == DaggerYes) {
     GRID_TRACE("DhopDagExterior");
     Kernels::DhopDagKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,0,1);
@@ -381,11 +389,12 @@ void WilsonFermion5D<Impl>::DhopInternalOverlappedComms(StencilImpl & st, Lebesg
     GRID_TRACE("DhopExterior");
     Kernels::DhopKernel   (Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out,0,1);
   }
+  //  std::cout << " WilsonFermion5D Done " <<std::endl;
 }
 
 
 template<class Impl>
-void WilsonFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, LebesgueOrder &lo,
+void WilsonFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, 
 						    DoubledGaugeField & U,
 						    const FermionField &in, 
 						    FermionField &out,int dag)
@@ -395,11 +404,13 @@ void WilsonFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, LebesgueOr
 
   int LLs = in.Grid()->_rdimensions[0];
 
+  //  std::cout << " WilsonFermion5D Halo exch " <<std::endl;
   {
     GRID_TRACE("HaloExchange");
     st.HaloExchangeOpt(in,compressor);
   }
   
+  //  std::cout << " WilsonFermion5D Dhop " <<std::endl;
   int Opt = WilsonKernelsStatic::Opt;
   if (dag == DaggerYes) {
     GRID_TRACE("DhopDag");
@@ -408,6 +419,7 @@ void WilsonFermion5D<Impl>::DhopInternalSerialComms(StencilImpl & st, LebesgueOr
     GRID_TRACE("Dhop");
     Kernels::DhopKernel(Opt,st,U,st.CommBuf(),LLs,U.oSites(),in,out);
   }
+  //  std::cout << " WilsonFermion5D Done " <<std::endl;
 }
 
 
@@ -420,7 +432,7 @@ void WilsonFermion5D<Impl>::DhopOE(const FermionField &in, FermionField &out,int
   assert(in.Checkerboard()==Even);
   out.Checkerboard() = Odd;
 
-  DhopInternal(StencilEven,LebesgueEvenOdd,UmuOdd,in,out,dag);
+  DhopInternal(StencilEven,UmuOdd,in,out,dag);
 }
 template<class Impl>
 void WilsonFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int dag)
@@ -431,8 +443,31 @@ void WilsonFermion5D<Impl>::DhopEO(const FermionField &in, FermionField &out,int
   assert(in.Checkerboard()==Odd);
   out.Checkerboard() = Even;
 
-  DhopInternal(StencilOdd,LebesgueEvenOdd,UmuEven,in,out,dag);
+  DhopInternal(StencilOdd,UmuEven,in,out,dag);
 }
+template<class Impl>
+void WilsonFermion5D<Impl>::DhopComms(const FermionField &in, FermionField &out)
+{
+  int dag =0 ;
+  conformable(in.Grid(),FermionGrid()); // verifies full grid
+  conformable(in.Grid(),out.Grid());
+  out.Checkerboard() = in.Checkerboard();
+  Compressor compressor(dag);
+  Stencil.HaloExchangeOpt(in,compressor);
+}
+template<class Impl>
+void WilsonFermion5D<Impl>::DhopCalc(const FermionField &in, FermionField &out,uint64_t *ids)
+{
+  conformable(in.Grid(),FermionGrid()); // verifies full grid
+  conformable(in.Grid(),out.Grid());
+
+  out.Checkerboard() = in.Checkerboard();
+
+  int LLs = in.Grid()->_rdimensions[0];
+  int Opt = WilsonKernelsStatic::Opt;
+  Kernels::DhopKernel(Opt,Stencil,Umu,Stencil.CommBuf(),LLs,Umu.oSites(),in,out,ids);
+}
+
 template<class Impl>
 void WilsonFermion5D<Impl>::Dhop(const FermionField &in, FermionField &out,int dag)
 {
@@ -441,7 +476,7 @@ void WilsonFermion5D<Impl>::Dhop(const FermionField &in, FermionField &out,int d
 
   out.Checkerboard() = in.Checkerboard();
 
-  DhopInternal(Stencil,Lebesgue,Umu,in,out,dag);
+  DhopInternal(Stencil,Umu,in,out,dag);
 }
 template<class Impl>
 void WilsonFermion5D<Impl>::DW(const FermionField &in, FermionField &out,int dag)
@@ -450,6 +485,54 @@ void WilsonFermion5D<Impl>::DW(const FermionField &in, FermionField &out,int dag
   Dhop(in,out,dag); // -0.5 is included
   axpy(out,4.0-M5,in,out);
 }
+template <class Impl>
+void WilsonFermion5D<Impl>::Meooe(const FermionField &in, FermionField &out)
+{
+  if (in.Checkerboard() == Odd) {
+    DhopEO(in, out, DaggerNo);
+  } else {
+    DhopOE(in, out, DaggerNo);
+  }
+}
+
+template <class Impl>
+void WilsonFermion5D<Impl>::MeooeDag(const FermionField &in, FermionField &out)
+{
+  if (in.Checkerboard() == Odd) {
+    DhopEO(in, out, DaggerYes);
+  } else {
+    DhopOE(in, out, DaggerYes);
+  }
+}
+
+template <class Impl>
+void WilsonFermion5D<Impl>::Mooee(const FermionField &in, FermionField &out)
+{
+  out.Checkerboard() = in.Checkerboard();
+  typename FermionField::scalar_type scal(4.0 + M5);
+  out = scal * in;
+}
+
+template <class Impl>
+void WilsonFermion5D<Impl>::MooeeDag(const FermionField &in, FermionField &out)
+{
+  out.Checkerboard() = in.Checkerboard();
+  Mooee(in, out);
+}
+
+template<class Impl>
+void WilsonFermion5D<Impl>::MooeeInv(const FermionField &in, FermionField &out)
+{
+  out.Checkerboard() = in.Checkerboard();
+  out = (1.0/(4.0 + M5))*in;
+}
+
+template<class Impl>
+void WilsonFermion5D<Impl>::MooeeInvDag(const FermionField &in, FermionField &out)
+{
+  out.Checkerboard() = in.Checkerboard();
+  MooeeInv(in,out);
+}
 
 template<class Impl>
 void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt_5d(FermionField &out,const FermionField &in, RealD mass,std::vector<double> twist)
@@ -735,6 +818,15 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHt(FermionField &out,const Fe
 
 template<class Impl>
 void WilsonFermion5D<Impl>::MomentumSpacePropagatorHw(FermionField &out,const FermionField &in,RealD mass,std::vector<double> twist)
+{
+  std::vector<double> empty_q(Nd,0.0);
+  MomentumSpacePropagatorHwQ(out,in,mass,twist,empty_q);
+}
+template<class Impl>
+void WilsonFermion5D<Impl>::MomentumSpacePropagatorHwQ(FermionField &out,const FermionField &in,
+						       RealD mass,
+						       std::vector<double> twist,
+						       std::vector<double> qmu)
 {
     Gamma::Algebra Gmu [] = {
       Gamma::Algebra::GammaX,
@@ -750,6 +842,7 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHw(FermionField &out,const Fe
     typedef typename FermionField::scalar_type ScalComplex;
 
     typedef Lattice<iSinglet<vector_type> > LatComplex;
+    typedef iSpinMatrix<ScalComplex> SpinMat;
 
 
     Coordinate latt_size   = _grid->_fdimensions;
@@ -767,8 +860,10 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHw(FermionField &out,const Fe
     LatComplex kmu(_grid); 
     ScalComplex ci(0.0,1.0);
 
+    std::cout<< "Feynman Rule" << "qmu ("<<qmu[0]<<","<<qmu[1]<<","<<qmu[2]<<","<<qmu[3]<<")"<<std::endl;
+    
     for(int mu=0;mu<Nd;mu++) {
-
+      
       LatticeCoordinate(kmu,mu);
 
       RealD TwoPiL =  M_PI * 2.0/ latt_size[mu];
@@ -777,9 +872,18 @@ void WilsonFermion5D<Impl>::MomentumSpacePropagatorHw(FermionField &out,const Fe
       kmu = kmu + TwoPiL * one * twist[mu];//momentum for twisted boundary conditions
 
       sk2 = sk2 + 2.0*sin(kmu*0.5)*sin(kmu*0.5);
-      sk  = sk  + sin(kmu)*sin(kmu); 
 
-      num = num - sin(kmu)*ci*(Gamma(Gmu[mu])*in);
+      sk = sk + (sin(kmu)+qmu[mu])*(sin(kmu)+qmu[mu]); 
+
+      // Terms for boosted Fermion
+      // 1/2 [ -i gamma.(sin p + q )     ]
+      //     [ --------------------- + 1 ]
+      //     [         wq + b            ]
+      //
+      // wq = sqrt( (sinp+q)^2 + b^2 )
+      //
+      
+      num = num - (sin(kmu)+qmu[mu])*ci*(Gamma(Gmu[mu])*in);
 
     }
     num = num + mass * in ;

Grid/qcd/action/fermion/implementation/WilsonFermionImplementation.h

@@ -52,17 +52,12 @@ WilsonFermion<Impl>::WilsonFermion(GaugeField &_Umu, GridCartesian &Fgrid,
     StencilEven(&Hgrid, npoint, Even, directions,displacements,p),  // source is Even
     StencilOdd(&Hgrid, npoint, Odd, directions,displacements,p),  // source is Odd
     mass(_mass),
-    Lebesgue(_grid),
-    LebesgueEvenOdd(_cbgrid),
     Umu(&Fgrid),
     UmuEven(&Hgrid),
     UmuOdd(&Hgrid),
       _tmp(&Hgrid),
       anisotropyCoeff(anis)
 {
-  Stencil.lo     = &Lebesgue;
-  StencilEven.lo = &LebesgueEvenOdd;
-  StencilOdd.lo  = &LebesgueEvenOdd;
   // Allocate the required comms buffer
   ImportGauge(_Umu);
   if  (anisotropyCoeff.isAnisotropic){
@@ -314,7 +309,7 @@ void WilsonFermion<Impl>::Dhop(const FermionField &in, FermionField &out, int da
 
   out.Checkerboard() = in.Checkerboard();
 
-  DhopInternal(Stencil, Lebesgue, Umu, in, out, dag);
+  DhopInternal(Stencil, Umu, in, out, dag);
 }
 
 template <class Impl>
@@ -326,7 +321,7 @@ void WilsonFermion<Impl>::DhopOE(const FermionField &in, FermionField &out, int
   assert(in.Checkerboard() == Even);
   out.Checkerboard() = Odd;
 
-  DhopInternal(StencilEven, LebesgueEvenOdd, UmuOdd, in, out, dag);
+  DhopInternal(StencilEven, UmuOdd, in, out, dag);
 }
 
 template <class Impl>
@@ -338,7 +333,7 @@ void WilsonFermion<Impl>::DhopEO(const FermionField &in, FermionField &out,int d
   assert(in.Checkerboard() == Odd);
   out.Checkerboard() = Even;
 
-  DhopInternal(StencilOdd, LebesgueEvenOdd, UmuEven, in, out, dag);
+  DhopInternal(StencilOdd, UmuEven, in, out, dag);
 }
 
 template <class Impl>
@@ -391,21 +386,21 @@ void WilsonFermion<Impl>::DhopDirCalc(const FermionField &in, FermionField &out,
 };
 
 template <class Impl>
-void WilsonFermion<Impl>::DhopInternal(StencilImpl &st, LebesgueOrder &lo,
+void WilsonFermion<Impl>::DhopInternal(StencilImpl &st, 
                                        DoubledGaugeField &U,
                                        const FermionField &in,
                                        FermionField &out, int dag)
 {
 #ifdef GRID_OMP
   if ( WilsonKernelsStatic::Comms == WilsonKernelsStatic::CommsAndCompute )
-    DhopInternalOverlappedComms(st,lo,U,in,out,dag);
+    DhopInternalOverlappedComms(st,U,in,out,dag);
   else
 #endif
-    DhopInternalSerial(st,lo,U,in,out,dag);
+    DhopInternalSerial(st,U,in,out,dag);
 }
 
 template <class Impl>
-void WilsonFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo,
+void WilsonFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, 
 						      DoubledGaugeField &U,
 						      const FermionField &in,
 						      FermionField &out, int dag)
@@ -474,10 +469,10 @@ void WilsonFermion<Impl>::DhopInternalOverlappedComms(StencilImpl &st, LebesgueO
 
 
 template <class Impl>
-void WilsonFermion<Impl>::DhopInternalSerial(StencilImpl &st, LebesgueOrder &lo,
+void WilsonFermion<Impl>::DhopInternalSerial(StencilImpl &st, 
-                                       DoubledGaugeField &U,
+					     DoubledGaugeField &U,
-                                       const FermionField &in,
+					     const FermionField &in,
-                                       FermionField &out, int dag)
+					     FermionField &out, int dag)
 {
   GRID_TRACE("DhopSerial");
   assert((dag == DaggerNo) || (dag == DaggerYes));

Grid/qcd/action/fermion/implementation/WilsonKernelsAsmAvx512.h

@@ -40,11 +40,11 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 /// Switch off the 5d vectorised code optimisations
 #undef DWFVEC5D
 
-static Vector<vComplexF> signsF;
+static std::vector<vComplexF> signsF;
 
   template<typename vtype>    
-  int setupSigns(Vector<vtype>& signs ){
+  int setupSigns(std::vector<vtype>& signs ){
-    Vector<vtype> bother(2);
+    std::vector<vtype> bother(2);
     signs = bother;
     vrsign(signs[0]);
     visign(signs[1]);
@@ -364,7 +364,7 @@ WilsonKernels<ZDomainWallVec5dImplF>::AsmDhopSiteDagExt(StencilView &st, Doubled
 
 #include <simd/Intel512double.h>
     
-static Vector<vComplexD> signsD;
+static std::vector<vComplexD> signsD;
 static int signInitD = setupSigns(signsD);
     
 #define MAYBEPERM(A,perm) if (perm) { A ; }

Grid/qcd/action/fermion/implementation/WilsonKernelsImplementation.h

@@ -63,7 +63,7 @@ accelerator_inline void get_stencil(StencilEntry * mem, StencilEntry &chip)
   } else {							\
     chi = coalescedRead(buf[SE->_offset],lane);			\
   }								\
-  acceleratorSynchronise();						\
+  acceleratorSynchronise();					\
   Impl::multLink(Uchi, U[sU], chi, Dir, SE, st);		\
   Recon(result, Uchi);
 
@@ -411,6 +411,46 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
 #undef LoopBody
 }
 
+#ifdef GRID_SYCL
+extern "C" {
+    ulong SYCL_EXTERNAL __attribute__((overloadable)) intel_get_cycle_counter( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_active_channel_mask( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_grf_register( uint reg );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_flag_register( uint flag );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_control_register( uint reg );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_hw_thread_id( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_slice_id( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_subslice_id( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_eu_id( void );
+    uint  SYCL_EXTERNAL __attribute__((overloadable)) intel_get_eu_thread_id( void );
+    void  SYCL_EXTERNAL __attribute__((overloadable)) intel_eu_thread_pause( uint value );
+}
+#ifdef GRID_SIMT
+#define MAKE_ID(A) (intel_get_eu_id()<<16)|(intel_get_slice_id()<<8)|(intel_get_subslice_id())
+#else
+#define MAKE_ID(A) (0)
+#endif
+
+#else
+
+#define MAKE_ID(A) (0)
+
+#endif
+
+
+#define KERNEL_CALL_ID(A)						\
+  const uint64_t    NN = Nsite*Ls;					\
+  accelerator_forNB( ss, NN, Simd::Nsimd(), {				\
+      int sF = ss;							\
+      int sU = ss/Ls;							\
+      WilsonKernels<Impl>::A(st_v,U_v,buf,sF,sU,in_v,out_v);		\
+      const int Nsimd = SiteHalfSpinor::Nsimd();			\
+      const int lane=acceleratorSIMTlane(Nsimd);                        \
+      int idx=sF*Nsimd+lane;						\
+      uint64_t id = MAKE_ID();						\
+      ids[idx]=id;							\
+    });									\
+  accelerator_barrier();
 
 #define KERNEL_CALLNB(A)						\
   const uint64_t    NN = Nsite*Ls;					\
@@ -418,7 +458,7 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
       int sF = ss;							\
       int sU = ss/Ls;							\
       WilsonKernels<Impl>::A(st_v,U_v,buf,sF,sU,in_v,out_v);		\
-  });
+    });
 
 #define KERNEL_CALL(A) KERNEL_CALLNB(A); accelerator_barrier();
 
@@ -434,7 +474,7 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
 
 #define ASM_CALL(A)							\
   thread_for( sss, Nsite, {						\
-    int ss = st.lo->Reorder(sss);					\
+    int ss = sss; /*st.lo->Reorder(sss);*/			\
     int sU = ss;							\
     int sF = ss*Ls;							\
     WilsonKernels<Impl>::A(st_v,U_v,buf,sF,sU,Ls,1,in_v,out_v);		\
@@ -451,6 +491,8 @@ void WilsonKernels<Impl>::DhopDirKernel( StencilImpl &st, DoubledGaugeField &U,S
     WilsonKernels<Impl>::A(st_v,U_v,buf,sF,sU,Ls,1,in_v,out_v);		\
     });}
 
+
+
 template <class Impl>
 void WilsonKernels<Impl>::DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField &U, SiteHalfSpinor * buf,
 				     int Ls, int Nsite, const FermionField &in, FermionField &out,
@@ -475,7 +517,7 @@ void WilsonKernels<Impl>::DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField
      if (Opt == WilsonKernelsStatic::OptInlineAsm  ) {  ASM_CALL(AsmDhopSiteInt);    return;}
 #endif
    } else if( exterior ) {
-     // dependent on result of merge
+     //     // dependent on result of merge
      acceleratorFenceComputeStream();
      if (Opt == WilsonKernelsStatic::OptGeneric    ) { KERNEL_CALL_EXT(GenericDhopSiteExt); return;}
      if (Opt == WilsonKernelsStatic::OptHandUnroll ) { KERNEL_CALL_EXT(HandDhopSiteExt);    return;}
@@ -485,6 +527,18 @@ void WilsonKernels<Impl>::DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField
    }
    assert(0 && " Kernel optimisation case not covered ");
   }
+
+template <class Impl>
+void WilsonKernels<Impl>::DhopKernel(int Opt,StencilImpl &st,  DoubledGaugeField &U, SiteHalfSpinor * buf,
+				     int Ls, int Nsite, const FermionField &in, FermionField &out,
+				     uint64_t *ids)
+{
+    autoView(U_v  ,  U,AcceleratorRead);
+    autoView(in_v , in,AcceleratorRead);
+    autoView(out_v,out,AcceleratorWrite);
+    autoView(st_v , st,AcceleratorRead);
+    KERNEL_CALL_ID(GenericDhopSite);
+}
   template <class Impl>
   void WilsonKernels<Impl>::DhopDagKernel(int Opt,StencilImpl &st,  DoubledGaugeField &U, SiteHalfSpinor * buf,
 					  int Ls, int Nsite, const FermionField &in, FermionField &out,

Grid/qcd/action/fermion/instantiation/CompactWilsonCloverFermion5DInstantiation.cc.master

@@ -0,0 +1,45 @@
+/*************************************************************************************
+
+    Grid physics library, www.github.com/paboyle/Grid
+
+    Source file: ./lib/ qcd/action/fermion/instantiation/CompactWilsonCloverFermionInstantiation5D.cc.master
+
+    Copyright (C) 2017 - 2025
+
+    Author: paboyle <paboyle@ph.ed.ac.uk>
+    Author: Guido Cossu <guido.cossu@ed.ac.uk>
+    Author: Daniel Richtmann <daniel.richtmann@gmail.com>
+    Author: Mattia Bruno <mattia.bruno@cern.ch>
+    Author: Christoph Lehner <christoph@lhnr.de>
+
+    This program is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License along
+    with this program; if not, write to the Free Software Foundation, Inc.,
+    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+    See the full license in the file "LICENSE" in the top level distribution directory
+    *************************************************************************************/
+/*  END LEGAL */
+
+#include <Grid/Grid.h>
+#include <Grid/qcd/spin/Dirac.h>
+#include <Grid/qcd/action/fermion/CompactWilsonCloverFermion5D.h>
+#include <Grid/qcd/action/fermion/implementation/CompactWilsonCloverFermion5DImplementation.h>
+#include <Grid/qcd/action/fermion/CloverHelpers.h>
+
+NAMESPACE_BEGIN(Grid);
+
+#include "impl.h"
+template class CompactWilsonCloverFermion5D<IMPLEMENTATION, CompactCloverHelpers<IMPLEMENTATION>>; 
+template class CompactWilsonCloverFermion5D<IMPLEMENTATION, CompactExpCloverHelpers<IMPLEMENTATION>>; 
+
+NAMESPACE_END(Grid);

Grid/qcd/action/fermion/instantiation/WilsonImplD/CompactWilsonCloverFermion5DInstantiationWilsonImplD.cc

@@ -0,0 +1 @@
+../CompactWilsonCloverFermion5DInstantiation.cc.master

Grid/qcd/action/fermion/instantiation/WilsonImplF/CompactWilsonCloverFermion5DInstantiationWilsonImplF.cc

@@ -0,0 +1 @@
+../CompactWilsonCloverFermion5DInstantiation.cc.master

Grid/qcd/action/fermion/instantiation/generate_instantiations.sh

@@ -62,7 +62,7 @@ do
 done
 done
 
-CC_LIST="CompactWilsonCloverFermionInstantiation"
+CC_LIST="CompactWilsonCloverFermionInstantiation CompactWilsonCloverFermion5DInstantiation"
 
 for impl in $COMPACT_WILSON_IMPL_LIST
 do

Grid/qcd/action/gauge/PlaqPlusRectangleAction.h

@@ -40,6 +40,11 @@ public:
 
   INHERIT_GIMPL_TYPES(Gimpl);
 
+  using Action<GaugeField>::S;
+  using Action<GaugeField>::Sinitial;
+  using Action<GaugeField>::deriv;
+  using Action<GaugeField>::refresh;
+
 private:
   RealD c_plaq;
   RealD c_rect;
@@ -71,27 +76,27 @@ public:
     return action;
   };
 
-  virtual void deriv(const GaugeField &Umu,GaugeField & dSdU) {
+  virtual void deriv(const GaugeField &U, GaugeField &dSdU) {
     //extend Ta to include Lorentz indexes
     RealD factor_p = c_plaq/RealD(Nc)*0.5;
     RealD factor_r = c_rect/RealD(Nc)*0.5;
 
-    GridBase *grid = Umu.Grid();
+    GridBase *grid = U.Grid();
 
-    std::vector<GaugeLinkField> U (Nd,grid);
+    std::vector<GaugeLinkField> Umu (Nd,grid);
     for(int mu=0;mu<Nd;mu++){
-      U[mu] = PeekIndex<LorentzIndex>(Umu,mu);
+      Umu[mu] = PeekIndex<LorentzIndex>(U,mu);
     }
     std::vector<GaugeLinkField> RectStaple(Nd,grid), Staple(Nd,grid);
-    WilsonLoops<Gimpl>::StapleAndRectStapleAll(Staple, RectStaple, U, workspace);
+    WilsonLoops<Gimpl>::StapleAndRectStapleAll(Staple, RectStaple, Umu, workspace);
 
     GaugeLinkField dSdU_mu(grid);
     GaugeLinkField staple(grid);
 
     for (int mu=0; mu < Nd; mu++){
-      dSdU_mu = Ta(U[mu]*Staple[mu])*factor_p;
+      dSdU_mu = Ta(Umu[mu]*Staple[mu])*factor_p;
-      dSdU_mu = dSdU_mu + Ta(U[mu]*RectStaple[mu])*factor_r;
+      dSdU_mu = dSdU_mu + Ta(Umu[mu]*RectStaple[mu])*factor_r;
-	  
+
       PokeIndex<LorentzIndex>(dSdU, dSdU_mu, mu);
     }
 

Grid/qcd/action/gauge/WilsonGaugeAction.h

@@ -43,6 +43,11 @@ class WilsonGaugeAction : public Action<typename Gimpl::GaugeField> {
 public:  
   INHERIT_GIMPL_TYPES(Gimpl);
 
+  using Action<GaugeField>::S;
+  using Action<GaugeField>::Sinitial;
+  using Action<GaugeField>::deriv;
+  using Action<GaugeField>::refresh;
+  
   /////////////////////////// constructors
   explicit WilsonGaugeAction(RealD beta_):beta(beta_){};
 
@@ -68,20 +73,23 @@ public:
     // extend Ta to include Lorentz indexes
 
     RealD factor = 0.5 * beta / RealD(Nc);
+    GridBase *grid = U.Grid();
 
-    GaugeLinkField Umu(U.Grid());
+    GaugeLinkField dSdU_mu(grid);
-    GaugeLinkField dSdU_mu(U.Grid());
+    std::vector<GaugeLinkField> Umu(Nd, grid);
     for (int mu = 0; mu < Nd; mu++) {
+      Umu[mu] = PeekIndex<LorentzIndex>(U, mu);
+    }
 
-      Umu = PeekIndex<LorentzIndex>(U, mu);
+    for (int mu = 0; mu < Nd; mu++) {
-      
       // Staple in direction mu
-      WilsonLoops<Gimpl>::Staple(dSdU_mu, U, mu);
+      WilsonLoops<Gimpl>::Staple(dSdU_mu, Umu, mu);
-      dSdU_mu = Ta(Umu * dSdU_mu) * factor;
+      dSdU_mu = Ta(Umu[mu] * dSdU_mu) * factor;
-      
+
       PokeIndex<LorentzIndex>(dSdU, dSdU_mu, mu);
     }
   }
+
 private:
   RealD beta;  
  };

Grid/qcd/hmc/checkpointers/BinaryCheckpointer.h

@@ -111,8 +111,8 @@ public:
   };
 
   void CheckpointRestore(int traj, Field &U, GridSerialRNG &sRNG, GridParallelRNG &pRNG) {
-    std::string config, rng;
+    std::string config, rng, smr;
-    this->build_filenames(traj, Params, config, rng);
+    this->build_filenames(traj, Params, config, smr, rng);
     this->check_filename(rng);
     this->check_filename(config);
 

Grid/qcd/hmc/checkpointers/ILDGCheckpointer.h

@@ -75,7 +75,7 @@ public:
                           GridParallelRNG &pRNG) {
     if ((traj % Params.saveInterval) == 0) {
       std::string config, rng, smr;
-      this->build_filenames(traj, Params, config, rng);
+      this->build_filenames(traj, Params, config, smr, rng);
       GridBase *grid = SmartConfig.get_U(false).Grid();
       uint32_t nersc_csum,scidac_csuma,scidac_csumb;
       BinaryIO::writeRNG(sRNG, pRNG, rng, 0,nersc_csum,scidac_csuma,scidac_csumb);
@@ -102,7 +102,7 @@ public:
       if ( Params.saveSmeared ) { 
 	IldgWriter _IldgWriter(grid->IsBoss());
 	_IldgWriter.open(smr);
-	_IldgWriter.writeConfiguration<GaugeStats>(SmartConfig.get_U(true), traj, config, config);
+	_IldgWriter.writeConfiguration<GaugeStats>(SmartConfig.get_U(true), traj, smr, smr);
 	_IldgWriter.close();
 
 	std::cout << GridLogMessage << "Written ILDG Configuration on " << smr
@@ -118,8 +118,8 @@ public:
 
   void CheckpointRestore(int traj, GaugeField &U, GridSerialRNG &sRNG,
                          GridParallelRNG &pRNG) {
-    std::string config, rng;
+    std::string config, rng, smr;
-    this->build_filenames(traj, Params, config, rng);
+    this->build_filenames(traj, Params, config, smr, rng);
     this->check_filename(rng);
     this->check_filename(config);
 

Grid/qcd/hmc/checkpointers/ScidacCheckpointer.h

@@ -107,8 +107,8 @@ class ScidacHmcCheckpointer : public BaseHmcCheckpointer<Implementation> {
 
   void CheckpointRestore(int traj, Field &U, GridSerialRNG &sRNG,
                          GridParallelRNG &pRNG) {
-    std::string config, rng;
+    std::string config, rng, smr;
-    this->build_filenames(traj, Params, config, rng);
+    this->build_filenames(traj, Params, config, smr, rng);
     this->check_filename(rng);
     this->check_filename(config);
 

Grid/qcd/representations/adjoint.h

@@ -40,7 +40,7 @@ public:
     U = Zero();
     LatticeColourMatrix tmp(Uin.Grid());
 
-    Vector<typename SU<ncolour>::Matrix> ta(Dimension);
+    std::vector<typename SU<ncolour>::Matrix> ta(Dimension);
 
     // Debug lines
     // LatticeMatrix uno(Uin.Grid());

Grid/qcd/representations/two_index.h

@@ -43,7 +43,7 @@ public:
     U = Zero();
     LatticeColourMatrix tmp(Uin.Grid());
 
-    Vector<typename GaugeGroup<ncolour,group_name>::Matrix> eij(Dimension);
+    std::vector<typename GaugeGroup<ncolour,group_name>::Matrix> eij(Dimension);
 
     for (int a = 0; a < Dimension; a++)
       GaugeGroupTwoIndex<ncolour, S, group_name>::base(a, eij[a]);

Grid/qcd/smearing/HISQSmearing.h

@@ -62,15 +62,15 @@ accelerator_inline int stencilIndex(int mu, int nu) {
 
 
 /*!  @brief structure holding the link treatment */
-struct SmearingParameters{
+struct HISQSmearingParameters{
-    SmearingParameters(){}
+    HISQSmearingParameters(){}
     Real c_1;               // 1 link
     Real c_naik;            // Naik term
     Real c_3;               // 3 link
     Real c_5;               // 5 link
     Real c_7;               // 7 link
     Real c_lp;              // 5 link Lepage
-    SmearingParameters(Real c1, Real cnaik, Real c3, Real c5, Real c7, Real clp) 
+    HISQSmearingParameters(Real c1, Real cnaik, Real c3, Real c5, Real c7, Real clp) 
         : c_1(c1),
           c_naik(cnaik),
           c_3(c3),
@@ -86,7 +86,7 @@ class Smear_HISQ : public Gimpl {
 
 private:
     GridCartesian* const _grid;
-    SmearingParameters _linkTreatment;
+    HISQSmearingParameters _linkTreatment;
 
 public:
 
@@ -117,7 +117,7 @@ public:
     //          IN--u_thin
     void smear(GF& u_smr, GF& u_naik, GF& u_thin) const {
 
-        SmearingParameters lt = this->_linkTreatment;
+        HISQSmearingParameters lt = this->_linkTreatment;
         auto grid = this->_grid;
 
         // Create a padded cell of extra padding depth=1 and fill the padding.

Grid/qcd/smearing/WilsonFlow.h

@@ -207,11 +207,14 @@ std::vector<RealD> WilsonFlowBase<Gimpl>::flowMeasureEnergyDensityCloverleaf(con
 }
 
 template <class Gimpl>
-void WilsonFlowBase<Gimpl>::setDefaultMeasurements(int topq_meas_interval){
+void WilsonFlowBase<Gimpl>::setDefaultMeasurements(int meas_interval){
-  addMeasurement(1, [](int step, RealD t, const typename Gimpl::GaugeField &U){
+  addMeasurement(meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
       std::cout << GridLogMessage << "[WilsonFlow] Energy density (plaq) : "  << step << "  " << t << "  " << energyDensityPlaquette(t,U) << std::endl;
     });
-  addMeasurement(topq_meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
+  addMeasurement(meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
+      std::cout << GridLogMessage << "[WilsonFlow] Energy density (cloverleaf) : "  << step << "  " << t << "  " << energyDensityCloverleaf(t,U) << std::endl;
+    });
+  addMeasurement(meas_interval, [](int step, RealD t, const typename Gimpl::GaugeField &U){
       std::cout << GridLogMessage << "[WilsonFlow] Top. charge           : "  << step << "  " << WilsonLoops<Gimpl>::TopologicalCharge(U) << std::endl;
     });
 }
@@ -249,6 +252,11 @@ void WilsonFlow<Gimpl>::smear(GaugeField& out, const GaugeField& in) const{
 
   out = in;
   RealD taus = 0.;
+
+  // Perform initial t=0 measurements
+  for(auto const &meas : this->functions)
+    meas.second(0,taus,out);
+  
   for (unsigned int step = 1; step <= Nstep; step++) { //step indicates the number of smearing steps applied at the time of measurement
     auto start = std::chrono::high_resolution_clock::now();
     evolve_step(out, taus);
@@ -333,6 +341,11 @@ void WilsonFlowAdaptive<Gimpl>::smear(GaugeField& out, const GaugeField& in) con
   RealD taus = 0.;
   RealD eps = init_epsilon;
   unsigned int step = 0;
+
+  // Perform initial t=0 measurements
+  for(auto const &meas : this->functions)
+    meas.second(step,taus,out);
+  
   do{
     int step_success = evolve_step_adaptive(out, taus, eps); 
     step += step_success; //step will not be incremented if the integration step fails

Grid/qcd/utils/BaryonUtils.h

@@ -971,7 +971,9 @@ void BaryonUtils<FImpl>::BaryonGamma3pt(
   autoView( vq_ti , q_ti     , AcceleratorRead);
   autoView( vq_tf , q_tf     , AcceleratorRead);
 
-  Vector<mobj> my_Dq_spec{Dq_spec1,Dq_spec2};
+  deviceVector<mobj> my_Dq_spec(2);
+  acceleratorPut(my_Dq_spec[0],Dq_spec1);
+  acceleratorPut(my_Dq_spec[1],Dq_spec2);
   mobj * Dq_spec_p = &my_Dq_spec[0];
 
   if (group == 1) {
@@ -1300,7 +1302,8 @@ void BaryonUtils<FImpl>::SigmaToNucleonEye(const PropagatorField &qq_loop,
   autoView( vd_tf   , qd_tf    , AcceleratorRead);
   autoView( vs_ti   , qs_ti    , AcceleratorRead);
 
-  Vector<mobj> my_Dq_spec{Du_spec};
+  deviceVector<mobj> my_Dq_spec(1);
+  acceleratorPut(my_Dq_spec[0],Du_spec);
   mobj * Dq_spec_p = &my_Dq_spec[0];
 
   if(op == "Q1"){
@@ -1353,7 +1356,8 @@ void BaryonUtils<FImpl>::SigmaToNucleonNonEye(const PropagatorField &qq_ti,
   autoView( vd_tf , qd_tf    , AcceleratorRead  );
   autoView( vs_ti , qs_ti    , AcceleratorRead  );
   
-  Vector<mobj> my_Dq_spec{Du_spec};
+  deviceVector<mobj> my_Dq_spec(1);
+  acceleratorPut(my_Dq_spec[0],Du_spec);
   mobj * Dq_spec_p = &my_Dq_spec[0];
 
   if(op == "Q1"){
@@ -1544,7 +1548,9 @@ void BaryonUtils<FImpl>::XiToSigmaEye(const PropagatorField &qq_loop,
   autoView( vd_tf   , qd_tf    , AcceleratorRead);
   autoView( vs_ti   , qs_ti    , AcceleratorRead);
 
-  Vector<mobj> my_Dq_spec{Dd_spec,Ds_spec};
+  deviceVector<mobj> my_Dq_spec(2);
+  acceleratorPut(my_Dq_spec[0],Dd_spec);
+  acceleratorPut(my_Dq_spec[0],Ds_spec);
   mobj * Dq_spec_p = &my_Dq_spec[0];
 
   if(op == "Q1"){

Grid/qcd/utils/SUn.impl.h

@@ -118,7 +118,7 @@ static void generatorDiagonal(int diagIndex, iGroupMatrix<cplx> &ta) {
 ////////////////////////////////////////////////////////////////////////
 // Map a su2 subgroup number to the pair of rows that are non zero
 ////////////////////////////////////////////////////////////////////////
-static void su2SubGroupIndex(int &i1, int &i2, int su2_index, GroupName::SU) {
+static accelerator_inline void su2SubGroupIndex(int &i1, int &i2, int su2_index, GroupName::SU) {
   assert((su2_index >= 0) && (su2_index < (ncolour * (ncolour - 1)) / 2));
 
   int spare = su2_index;

Grid/qcd/utils/SUnAdjoint.h

@@ -62,7 +62,7 @@ public:
     // returns i(T_Adj)^index necessary for the projectors
     // see definitions above
     iAdjTa = Zero();
-    Vector<iSUnMatrix<cplx> > ta(ncolour * ncolour - 1);
+    iSUnMatrix<cplx> ta[ncolour * ncolour - 1];
     iSUnMatrix<cplx> tmp;
 
     // FIXME not very efficient to get all the generators everytime

Grid/qcd/utils/Sp2n.impl.h

@@ -207,7 +207,7 @@ static void generatorZtype(int zIndex, iGroupMatrix<cplx> &ta) {
 // Map a su2 subgroup number to the pair of rows that are non zero
 ////////////////////////////////////////////////////////////////////////
 template <ONLY_IF_Sp>
-static void su2SubGroupIndex(int &i1, int &i2, int su2_index, GroupName::Sp) {
+static accelerator_inline void su2SubGroupIndex(int &i1, int &i2, int su2_index, GroupName::Sp) {
   const int nsp=ncolour/2;
   assert((su2_index >= 0) && (su2_index < (nsp * (nsp - 1)) / 2));
 

Grid/qcd/utils/WilsonLoops.h

@@ -292,19 +292,21 @@ public:
   //////////////////////////////////////////////////
   // the sum over all nu-oriented staples for nu != mu on each site
   //////////////////////////////////////////////////
-  static void Staple(GaugeMat &staple, const GaugeLorentz &Umu, int mu) {
+  static void Staple(GaugeMat &staple, const GaugeLorentz &U, int mu) {
 
-    GridBase *grid = Umu.Grid();
+    std::vector<GaugeMat> Umu(Nd, U.Grid());
-
-    std::vector<GaugeMat> U(Nd, grid);
     for (int d = 0; d < Nd; d++) {
-      U[d] = PeekIndex<LorentzIndex>(Umu, d);
+      Umu[d] = PeekIndex<LorentzIndex>(U, d);
     }
-    Staple(staple, U, mu);
+    Staple(staple, Umu, mu);
   }
 
-  static void Staple(GaugeMat &staple, const std::vector<GaugeMat> &U, int mu) {
+  static void Staple(GaugeMat &staple, const std::vector<GaugeMat> &Umu, int mu) {
-    staple = Zero();
+
+    autoView(staple_v, staple, AcceleratorWrite);
+    accelerator_for(i, staple.Grid()->oSites(), Simd::Nsimd(), {
+        staple_v[i] = Zero();
+    });
 
     for (int nu = 0; nu < Nd; nu++) {
 
@@ -318,12 +320,12 @@ public:
         //      |
         //    __|
         //
-     
+
         staple += Gimpl::ShiftStaple(
 				     Gimpl::CovShiftForward(
-							    U[nu], nu,
+							    Umu[nu], nu,
 							    Gimpl::CovShiftBackward(
-										    U[mu], mu, Gimpl::CovShiftIdentityBackward(U[nu], nu))),
+										    Umu[mu], mu, Gimpl::CovShiftIdentityBackward(Umu[nu], nu))),
 				     mu);
 
         //  __
@@ -333,8 +335,8 @@ public:
         //
 
         staple += Gimpl::ShiftStaple(
-				     Gimpl::CovShiftBackward(U[nu], nu,
+				     Gimpl::CovShiftBackward(Umu[nu], nu,
-							     Gimpl::CovShiftBackward(U[mu], mu, U[nu])), mu);
+							     Gimpl::CovShiftBackward(Umu[mu], mu, Umu[nu])), mu);
       }
     }
   }