Peter Boyle
99220f6531
Fixes and better timing
2017-04-26 17:24:11 -04:00
Peter Boyle
f8797e1e3e
bug fix. works now and great face performance
2017-04-26 03:14:02 -04:00
Peter Boyle
fd1eb7de13
Clean implementation of the exterior faces listing only those points on the boudary
2017-04-26 02:34:52 -04:00
Peter Boyle
2ce898efa3
Pretty code
2017-04-26 02:34:25 -04:00
paboyle
ab66bac4e6
Think I'm getting on top of the reduced cost exterior precomputed list of links
2017-04-25 08:50:26 +01:00
paboyle
56277a11c8
Build a list of whats on the surface
2017-04-24 17:06:15 +01:00
Peter Boyle
5b55867a7a
Slightly cheaper Ext assembly
2017-04-24 05:36:11 -04:00
Peter Boyle
3accb1ef89
Debugged assemply split phase with interior suppression
2017-04-23 19:30:19 -04:00
Peter Boyle
e3d0e31525
Debugged assemply split phase with interior suppression
2017-04-23 19:29:27 -04:00
Peter Boyle
5812eb8a8c
Partially fixed. But the comms-overlap does not work yet.
2017-04-22 18:50:25 -04:00
paboyle
ac58565d0a
Dangerous rewrite of the assembly. If I make a mistake the debug will be painful.
2017-04-22 19:31:04 +01:00
paboyle
3703b718aa
Mark up a table if a given site only receives from itself; including MPI3 splitting info.
2017-04-22 19:28:37 +01:00
paboyle
b722889234
Try a better load balancing loop
2017-04-22 19:27:41 +01:00
paboyle
abba44a837
Hand unrolled for overlapped comms
2017-04-22 17:45:17 +01:00
paboyle
f301be94ce
Fixed
2017-04-22 17:42:31 +01:00
Peter Boyle
1d1b225497
Hand unrolled Nc=3 kernels support split phase compute (on-node, off-node).
2017-04-22 09:05:28 -04:00
Peter Boyle
53a785a3dd
Fixing the KNL compile
2017-04-22 08:11:51 -04:00
paboyle
736bf3c866
Major rework of stencil. Half precision and MPI3 now working.
2017-04-22 11:33:50 +01:00
paboyle
b9bbe5d188
L1p config bg/q
2017-04-22 11:33:09 +01:00
paboyle
3844bcf800
If no f16c instructions supported must use software half precision conversion.
...
This will also become useful on BG/Q, so will move out from SSE4 into a general area.
Lifted the Eigen half precision from web. Looks sensible, but not extensively regressed
against the intrinsics implementation yet.
2017-04-20 15:30:52 +01:00
paboyle
e1a2319d01
Simple compressor moved out of cshift into stencil
2017-04-20 13:18:15 +01:00
paboyle
180c732b4c
Move compressors out of Cshift.
...
Slice iterators would help
2017-04-20 13:17:55 +01:00
paboyle
d2312e9874
Drop compressor entirely from Cshift to only Stencil.
2017-04-20 13:16:55 +01:00
paboyle
fc4ab9ccd5
Working half precision comms
2017-04-20 11:20:26 +01:00
paboyle
4a340aa5ca
Massive compressor rework to support reduced precision comms
2017-04-20 09:28:27 +01:00
paboyle
3b7de792d5
Type comparison in the traits work
2017-04-18 13:28:04 +01:00
paboyle
557c3fa109
Pretty change
2017-04-18 13:27:38 +01:00
paboyle
8e161152e4
MultiRHS solver improvements with slice operations moved into lattice and sped up.
...
Block solver requires a lot of performance work.
2017-04-18 10:51:55 +01:00
paboyle
3141ebac10
MultiRHS working, starting to optimise. Block doesn't and I thought it already was; puzzled.
2017-04-17 10:50:19 +01:00
paboyle
7ede696126
Non compile of tests fixed
2017-04-16 23:40:00 +01:00
paboyle
bf516c3b81
higher precision reduction variables in norm and inner product
2017-04-15 12:27:28 +01:00
paboyle
441a52ee5d
First cut at higher precision reduction
2017-04-15 10:57:21 +01:00
paboyle
a8db024c92
Cleaning up the dense matrix and lanczos sector
2017-04-15 08:54:11 +01:00
paboyle
3ca41458a3
Fix to no USE_FP16 case
2017-04-14 14:20:54 +01:00
Peter Boyle
951be75292
Half precision conversion working on AVX512 now too
2017-04-13 17:35:11 +01:00
Peter Boyle
b9113ed310
Patches for knl
2017-04-13 12:02:12 -04:00
a6a0da873f
Merge branch 'feature/hadrons' into feature/qed-fvol
2017-04-13 15:31:06 +01:00
paboyle
42fb49d3fd
Merge branch 'develop' of https://github.com/paboyle/Grid into develop
2017-04-13 14:12:47 +01:00
paboyle
db5ea001a3
Update to use Xcode 8.3 since -mfp16 causes SIGILL
2017-04-13 12:22:40 +01:00
paboyle
1d502e4ed6
FP16 optional compile time
2017-04-13 11:55:24 +01:00
paboyle
73cdf0fffe
Drop f16c from SSE because of a macos compile error on travis
2017-04-13 11:23:41 +01:00
paboyle
1c25773319
Trap illegal instructions
2017-04-13 10:51:40 +01:00
paboyle
94eb829d08
Align cast fixed for __mm128i gcc complained
2017-04-13 08:40:44 +01:00
paboyle
68392ddb5b
Exchange in generic
...
Precision change in AVX, SSE, AVX512, Generic. QPX still to do.
2017-04-13 08:38:12 +01:00
paboyle
cb6b81ae82
Half precision conversion
2017-04-12 19:32:37 +01:00
53e76b41d2
Merge branch 'develop' into feature/hadrons
2017-04-10 17:00:53 +01:00
8ef4300412
spurious .dirstamp files removed
2017-04-10 17:00:22 +01:00
98a24ebf31
The macro “magics” is very intensive for the preprocessor in the measurement code which has numerous serialisable classes. Reducing the number of serialisable fields to 64 (instead of 1024) helps a lot, this is enough for now and can be extended trivially if needed in the future.
2017-04-10 16:58:54 +01:00
paboyle
b12dc89d26
Commenting and clean up
2017-04-10 20:38:20 +09:00
paboyle
d80d802f9d
MultiRHS solver test
2017-04-10 00:12:12 +09:00
paboyle
3d99b09dba
Start of blockCG
2017-04-09 23:42:10 +09:00
paboyle
db5f6d3ae3
Verbose fix
2017-04-09 23:41:30 +09:00
paboyle
683550f116
Const args improvement
2017-04-09 23:41:04 +09:00
paboyle
86aaa35294
Christoph needs SchurDiagTwoKappa which is mobius specific.
2017-04-07 11:07:40 +09:00
Guido Cossu
7b03d8d087
Fixing the remaining merge conflicts
2017-04-05 16:17:46 +01:00
Guido Cossu
4b759b8f2a
Merge branch 'feature/hmc_generalise' into feature/scalar_adjointFT
2017-04-05 14:50:28 +01:00
Guido Cossu
8c540333d5
Merge branch 'develop' into feature/hmc_generalise
2017-04-05 14:41:04 +01:00
paboyle
5592f7b8c1
Creation mode better implementation
2017-04-05 02:35:34 +09:00
paboyle
35da4ece0b
UID fix
2017-04-05 02:18:15 +09:00
ff4e54ef80
Merge branch 'develop' into feature/hadrons
2017-04-03 18:56:21 +01:00
paboyle
83f6fab8fa
Big/Small crush test, and fast SITMO rng init, faster but not ideal
...
MT and Ranlux init.
2017-04-02 12:10:51 +09:00
paboyle
9dc7ca4c3b
Sitmo fast init
2017-04-02 00:28:22 +09:00
paboyle
935d82f5b1
sanity checks
2017-04-02 00:27:28 +09:00
paboyle
9cbcdd65d7
No random device seed
2017-04-02 00:26:57 +09:00
paboyle
7e5faa0f34
Multiple RNGs
2017-04-02 00:25:44 +09:00
paboyle
1c4bc7ed38
Debugged staggered conventions
2017-03-31 14:41:48 +09:00
paboyle
93ea5d9468
Pretty code
2017-03-30 15:00:03 +09:00
paboyle
9fd23faadf
Pretty layout
2017-03-30 13:44:45 +09:00
paboyle
10e4fa0dc8
Template instantiation improvements
2017-03-30 13:44:25 +09:00
paboyle
c4aca1dde4
Conjugate coefficients on adjoint
2017-03-30 13:44:05 +09:00
paboyle
b9e8ea3aaa
conjugate coefficient on the dagger
2017-03-30 13:43:13 +09:00
paboyle
077aa728b9
Fix the ZMobius (I think)
2017-03-30 13:42:09 +09:00
paboyle
a8d83d886e
Macro controls
2017-03-30 13:31:34 +09:00
paboyle
7fd46eeec4
Trailing whitespace removal
2017-03-30 13:31:10 +09:00
paboyle
2b115929dc
Small AVX512 asm ifdef patch
2017-03-29 18:51:23 +09:00
paboyle
417ec56cca
Release candidate
2017-03-29 05:45:33 -04:00
paboyle
756bc25008
Verbose header print by default
2017-03-29 04:44:17 -04:00
paboyle
35695ba57a
Bug fix in MPI3
2017-03-29 04:43:55 -04:00
paboyle
d805867e02
Better init
2017-03-28 13:25:05 -04:00
paboyle
98f9318279
Build on AVX2 and MPI passing with clang++
2017-03-28 23:16:04 +09:00
paboyle
4b17e8eba8
Merge branch 'develop' into feature/bgq-asm
...
Conflicts:
lib/qcd/action/fermion/Fermion.h
lib/qcd/action/fermion/WilsonFermion.cc
lib/util/Init.cc
tests/Test_cayley_even_odd_vec.cc
2017-03-28 04:49:30 -04:00
paboyle
75112a632a
IO improvements to fail on IO error
2017-03-28 02:28:04 -04:00
paboyle
18bde08d1b
Merge branch 'feature/staggering' into develop
2017-03-28 15:25:55 +09:00
Guido Cossu
4c1ea8677e
Small cosmetic changes and vscode gitignore
2017-03-23 14:09:35 +09:00
paboyle
fc93f0b2ec
Save some code for static huge tlb's. It is ifdef'ed out but an interesting root only experiment.
...
No gain from it.
2017-03-21 22:30:29 -04:00
paboyle
8c8473998d
Average over whole cluster the comm time.
2017-03-21 22:29:51 -04:00
Guido Cossu
120fb59978
Adding tests for WilsonFlow classes
2017-03-21 16:11:35 +09:00
Guido Cossu
fd56b3ff38
Merge branch 'develop' into feature/hmc_generalise
2017-03-21 13:33:41 +09:00
Guido Cossu
0ec6829edc
Fixing compilation errors for the WilsonFlow
2017-03-21 13:06:32 +09:00
Guido Cossu
18b7845b7b
Adding WilsonFlow smearing
2017-03-21 11:52:05 +09:00
Guido Cossu
3d0fe15374
Added topological charge measurement
2017-03-17 16:14:57 +09:00
Guido Cossu
91886068fe
Fixed seg fault for observable modules
2017-03-17 13:59:31 +09:00
Guido Cossu
6d1e9e5f92
Small cleanup of the observables
2017-03-17 11:42:55 +09:00
Guido Cossu
b640230b1e
Moving hmc observables in a different directory
2017-03-17 11:40:17 +09:00
paboyle
e7c36771ed
ZMobius prep for asm
2017-03-15 14:23:33 -04:00
Guido Cossu
038b6ee9cd
Fixing JSON compilation error
2017-03-16 01:09:24 +09:00
Guido Cossu
38806343a8
Improving efficiency of the force term
2017-03-15 15:16:16 +09:00
Guido Cossu
831ca4e3bf
Added Scalar action for fields in the adjoint representation
2017-03-14 14:55:18 +09:00
paboyle
8dc57a1e25
Layout change
2017-03-13 11:11:46 +00:00
paboyle
f57bd770b0
Merge branch 'bugfix/dminus' into feature/bgq-asm
2017-03-13 11:11:03 +00:00
paboyle
4ed10a3d06
Merge branch 'develop' into feature/bgq-asm
2017-03-13 11:10:10 +00:00
Chulwoo Jung
33edde245d
Changing Dminus(Dag) to use full vectors to work correctly
2017-03-12 23:02:42 -04:00
paboyle
447c5e6cd7
Z mobius hermiticity correction
2017-03-13 01:30:43 +00:00
paboyle
8b99d80d8c
Merge branch 'bgq-asm-shmemfixes' into feature/bgq-asm
2017-03-12 23:30:09 +00:00
Guido Cossu
b3dede4dd3
Merge branch 'develop' into feature/hmc_generalise
2017-03-10 23:57:37 +09:00
Guido Cossu
4e34132f4d
Correcting modules use in test files
2017-03-10 23:54:53 +09:00
Guido Cossu
c07cb10247
Merge branch 'feature/hmc_generalise' of https://github.com/paboyle/Grid into feature/hmc_generalise
2017-03-10 22:37:25 +09:00
Guido Cossu
d7767a2a62
Few more tests
2017-03-10 22:33:48 +09:00
Guido Cossu
ec035983fd
Fixing the implicit integration
2017-03-01 11:56:35 +00:00
paboyle
af230a1fb8
Average the time across the whole machine for outliers
2017-02-28 17:05:22 -05:00
Christopher Kelly
06a132e3f9
Fixes to SHMEM comms
2017-02-28 13:31:54 -08:00
Guido Cossu
596dcd85b2
Auxiliary fields
2017-02-27 13:16:38 +00:00
paboyle
96d44d5c55
Header fix
2017-02-24 19:12:11 -05:00
Guido Cossu
7270c6a150
Integrator works now
2017-02-24 17:03:42 +00:00
Lanny91
7fe797daf8
SIMD vector length sanity checks
2017-02-23 16:49:44 +00:00
Lanny91
486a01294a
Corrected QPX SIMD width
2017-02-23 16:47:56 +00:00
paboyle
586a7c90b7
Merge branch 'develop' into feature/bgq-asm
2017-02-23 00:26:59 +00:00
paboyle
e099dcdae7
Merge branch 'develop' into feature/bgq-asm
2017-02-23 00:25:29 +00:00
paboyle
4e7ab3166f
Refactoring header layout
2017-02-22 18:09:33 +00:00
paboyle
aac80cbb44
Bug fix from Chris K
2017-02-22 12:19:09 -05:00
Lanny91
c80948411b
Added tRotate function and MaddRealPart struct for generic SIMD, bugfix in MultRealPart and minor cosmetic changes.
2017-02-22 14:57:10 +00:00
Lanny91
95625a7bd1
Use Grid Integer type
2017-02-22 13:09:32 +00:00
Lanny91
0796696733
Emulated integer vector type for QPX and generic SIMD instruction sets.
2017-02-22 12:01:36 +00:00
azusayamaguchi
1c30e9a961
Verified
2017-02-21 23:01:25 +00:00
Francesco Sanfilippo
93cc270016
making public same serializable parameters in HMC Module
...
RNGModuleParameters
GridModuleParameters
2017-02-21 23:11:56 +01:00
Francesco Sanfilippo
15e668eef1
now it is possible to pass {coords list} to a peek or poke
2017-02-21 22:48:38 +01:00
azusayamaguchi
bf7e3f20d4
Staggaered fermion optimised version
2017-02-21 14:35:42 +00:00
Guido Cossu
902afcfbaf
Adding metric and the implicit steps
2017-02-21 11:30:57 +00:00
paboyle
3ae92fa2e6
Global changes to parallel_for structure.
...
Move the comms flags to more sensible names
2017-02-21 05:24:27 -05:00
paboyle
3906cd2149
Stencil fix on BNL KNL system
2017-02-20 17:51:31 -05:00
paboyle
661fc4d3d1
Debug AVX512 exchange code paths
2017-02-20 17:48:36 -05:00
paboyle
41009cc142
Move excange into the stencil only; keep Cshift fully general
2017-02-20 17:48:04 -05:00
paboyle
37720c4db7
Count bytes off node only
2017-02-20 17:47:40 -05:00
Guido Cossu
97a6b61551
Covariant laplacian and implicit integration
2017-02-20 11:17:27 +00:00
paboyle
cd0da81196
Merge branch 'feature/bgq-asm' of https://github.com/paboyle/Grid into feature/bgq-asm
2017-02-16 18:52:30 -05:00
paboyle
f246fe3304
Improvements to avx for invertible to avoid latent bug
2017-02-16 23:52:44 +00:00
paboyle
8a29c16bde
Faster gather exchange
2017-02-16 23:52:22 +00:00
paboyle
d68907fc3e
Debug temp
2017-02-16 18:51:35 -05:00
paboyle
5c0adf7bf2
Make clang happy with parenthesis
2017-02-16 23:51:33 +00:00
paboyle
be3a8249c6
Faster gather
2017-02-16 23:51:15 +00:00
paboyle
bd600702cf
Vectorise the XYZT face gathering better.
...
Hard coded for simd_layout <= 2 in any given spread out direction; full generality is inconsistent
with efficiency.
2017-02-15 11:11:04 +00:00
Guido Cossu
bafb101e4f
Testing different versions of the Laplacian
2017-02-13 15:38:11 +00:00
Guido Cossu
08fdf05528
Added and tested the covariant laplacian + CG solver
2017-02-13 15:05:01 +00:00
paboyle
aca7a3ef0a
Optimisation control improvements
2017-02-10 18:22:31 -05:00
Guido Cossu
c3d7ec65fa
All tests compile.
2017-02-10 10:27:51 +00:00
Guido Cossu
e0571c872b
Merge branch 'develop' into feature/hmc_generalise
2017-02-09 16:12:00 +00:00
Guido Cossu
84687ccf1f
Handling an Intel compiler warning for Json class
2017-02-09 15:33:33 +00:00
Guido Cossu
3274561cf8
Cleanup
2017-02-09 15:18:38 +00:00
paboyle
2c246551d0
Overlap comms and compute options in wilson kernels
2017-02-07 01:37:10 -05:00
paboyle
71ac2e7940
Faster RNG init
2017-02-07 01:33:23 -05:00
paboyle
a48ee6f0f2
Don't use MPI3_leader any more. No real gain and complex
2017-02-07 01:31:24 -05:00
paboyle
73547cca66
MPI3 working i think
2017-02-07 01:30:02 -05:00
paboyle
123c673db7
Policy to control async or sync SendRecv
2017-02-07 01:24:54 -05:00
paboyle
61f82216e2
Communicator Policy, NodeCount distinct from Rank count
2017-02-07 01:22:53 -05:00
paboyle
8e7ca92278
Debugged cshift case
2017-02-07 01:21:32 -05:00
paboyle
485ad6fde0
Stencil working in SHM MPI3
2017-02-07 01:20:39 -05:00
paboyle
6ea2184e18
OMP define change
2017-02-07 01:17:16 -05:00
paboyle
fdc170b8a3
Parallel fors in lattice transfer
2017-02-07 01:16:39 -05:00
paboyle
85c7bc4321
Bug fixes for cases that physics code couldn't hit but latent
...
and discovered on KNL (long vector, y SIMD dir) and checker dir set to y.
Remove the assertions on these code paths now they are tested.
2017-02-07 01:01:15 -05:00
paboyle
0883d6a7ce
Overlap comms compute support; make reg naming consistent with bgq aasm
2017-02-07 00:59:32 -05:00
paboyle
b5e9c900a4
Better printing and signal handling options
2017-02-07 00:57:55 -05:00
paboyle
4bbdfb434c
Overlap comms compute modifications
2017-02-07 00:57:01 -05:00
Lanny91
b7cd1a19e3
Utilities for reading and writing "pair" objects.
2017-02-06 14:08:59 +00:00
Christopher Kelly
c94133af49
Added iteration reporting to CG and mixed CG
...
Added ability to manually change the initial CG inner tolerance in mixed CG
Added .hpp files to filelist script
2017-02-02 17:04:42 -05:00
eedcaf6470
Merge branch 'feature/hadrons' into feature/qed-fvol
2017-02-01 15:53:10 -08:00
e7d8030a64
operator>> for serialisable enums
2017-02-01 15:51:08 -08:00
d775fbb2f9
Gammas: code cleaning and gamma_L implementation & test
2017-02-01 15:45:05 -08:00
863855f46f
header fix
2017-02-01 11:59:44 -08:00
419af7610d
New gamma matrices tidying: generated code is confined to Gamma.* for readability
2017-02-01 11:23:12 -08:00
1140573027
Gamma adj fix: now in Grid namespace to avoid collisions
2017-01-30 10:53:04 -08:00
a0cfbb6e88
Merge branch 'feature/gammas' into feature/hadrons
...
# Conflicts:
# .gitignore
# lib/qcd/spin/Dirac.cc
# scripts/filelist
2017-01-30 09:10:49 -08:00
515a26b3c6
gammas: copyright update
2017-01-30 09:07:09 -08:00
Guido Cossu
16be6d378c
Now action factory support different Fields (templated)
2017-01-30 14:22:41 +00:00
Guido Cossu
f05d0565aa
Adding ScalarField theory
2017-01-30 10:59:28 +00:00
28d99b5297
Merge branch 'develop' into feature/qed-fvol
2017-01-27 16:59:53 -08:00
Guido Cossu
899e685627
Merge branch 'feature/sitmo_rng' into develop
2017-01-27 14:15:56 +00:00
Guido Cossu
6929a84c70
Reformatting files
2017-01-27 11:54:44 +00:00
Guido Cossu
5c779a789b
Moving registrations in an independent file
2017-01-27 11:23:51 +00:00
fad743fbb1
Build system sanity check: corrected several headers not in the <Grid/*> format
2017-01-26 17:00:41 -08:00
Guido Cossu
e863a948e3
Cleaning up files and directories
2017-01-26 15:24:49 +00:00
Guido Cossu
7996f06335
Commented out registrations.
...
Move to an independent file that is linked only for the factory managed HMC
2017-01-25 18:27:45 +00:00
Guido Cossu
ef8d3831eb
Temporary patch the threading error in InsertSlice and ExtractSlice
...
Find source and fix the error
2017-01-25 18:12:04 +00:00
Guido Cossu
70ed9fc40c
Updating the engine to the last version
2017-01-25 18:10:41 +00:00
Guido Cossu
7b40a3e3e5
Reorganizing files
2017-01-25 18:09:46 +00:00
Guido Cossu
677757cfeb
Added and tested SITMO PRNG
2017-01-25 12:47:22 +00:00
Guido Cossu
f7fbbaaca3
Compiles after merging
2017-01-25 12:11:58 +00:00
Guido Cossu
17629b8d9e
Merge branch 'develop' into feature/hmc_generalise
2017-01-25 11:33:53 +00:00
Guido Cossu
0baa20d292
Againg fixing compilation on Travis, no LIME lib present
2017-01-25 11:18:44 +00:00
Guido Cossu
4571c918a4
Fixing compilation error when compiling without LIME
2017-01-25 11:14:43 +00:00
Guido Cossu
5251ea4d30
Adding more fermion action modules, generalised DWF
2017-01-25 11:10:44 +00:00
05cb6d318a
gammas: adjoint implemented as a symbolic operation
2017-01-24 18:07:43 -08:00
0432e30256
Gamma right multiply code fix (now passes consistency check)
2017-01-24 17:36:23 -08:00
f7db342f49
Serialisable enums can be converted to int
2017-01-24 17:33:26 -08:00
Guido Cossu
7f456b4173
👷 Added all pseudofermion actions to the serialiser
2017-01-24 13:57:32 +00:00
a37e71f362
New automatic implementation of gamma matrices, Meson and SeqGamma are broken
2017-01-23 19:13:43 -08:00
Guido Cossu
244f8fb6dc
Added JSON parser (without NextElement)
2017-01-23 14:57:38 +00:00
37988221a8
Merge branch 'feature/serialisation-hdf5' into feature/qed-fvol
2017-01-20 14:04:20 -08:00
4c75095c61
HDF5: header fix
2017-01-20 12:14:01 -08:00
afa095d33d
HDF5: better complex number support
2017-01-20 12:10:41 -08:00
6b5259cc10
HDF5 detects if a name is a dataset or not without using exception catching
2017-01-20 11:03:19 -08:00
