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			603 Commits
		
	
	
		
			feature/hd
			...
			feature/co
		
	
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						 | 
					4180a4a8a7 | 
@@ -9,11 +9,6 @@ matrix:
 | 
			
		||||
    - os:        osx
 | 
			
		||||
      osx_image: xcode8.3
 | 
			
		||||
      compiler: clang
 | 
			
		||||
      env: PREC=single
 | 
			
		||||
    - os:        osx
 | 
			
		||||
      osx_image: xcode8.3
 | 
			
		||||
      compiler: clang
 | 
			
		||||
      env: PREC=double
 | 
			
		||||
      
 | 
			
		||||
before_install:
 | 
			
		||||
    - export GRIDDIR=`pwd`
 | 
			
		||||
@@ -55,7 +50,7 @@ script:
 | 
			
		||||
    - make -j4
 | 
			
		||||
    - make install
 | 
			
		||||
    - cd $CWD/build
 | 
			
		||||
    - ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF}
 | 
			
		||||
    - ../configure --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF}
 | 
			
		||||
    - make -j4 
 | 
			
		||||
    - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
 | 
			
		||||
    - make check
 | 
			
		||||
 
 | 
			
		||||
@@ -37,7 +37,9 @@ directory
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 //disables and intel compiler specific warning (in json.hpp)
 | 
			
		||||
#ifdef __ICC
 | 
			
		||||
#pragma warning disable 488  
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#ifdef __NVCC__
 | 
			
		||||
 //disables nvcc specific warning in json.hpp
 | 
			
		||||
 
 | 
			
		||||
@@ -47,9 +47,9 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/perfmon/PerfCount.h>
 | 
			
		||||
#include <Grid/util/Util.h>
 | 
			
		||||
#include <Grid/log/Log.h>
 | 
			
		||||
#include <Grid/allocator/AlignedAllocator.h>
 | 
			
		||||
#include <Grid/allocator/Allocator.h>
 | 
			
		||||
#include <Grid/simd/Simd.h>
 | 
			
		||||
#include <Grid/threads/Threads.h>
 | 
			
		||||
#include <Grid/threads/ThreadReduction.h>
 | 
			
		||||
#include <Grid/serialisation/Serialisation.h>
 | 
			
		||||
#include <Grid/util/Sha.h>
 | 
			
		||||
#include <Grid/communicator/Communicator.h> 
 | 
			
		||||
 
 | 
			
		||||
@@ -6,6 +6,7 @@
 | 
			
		||||
///////////////////
 | 
			
		||||
#include <cassert>
 | 
			
		||||
#include <complex>
 | 
			
		||||
#include <memory>
 | 
			
		||||
#include <vector>
 | 
			
		||||
#include <array>
 | 
			
		||||
#include <string>
 | 
			
		||||
@@ -27,4 +28,7 @@
 | 
			
		||||
///////////////////
 | 
			
		||||
#include "Config.h"
 | 
			
		||||
 | 
			
		||||
#ifdef TOFU
 | 
			
		||||
#undef GRID_COMMS_THREADS
 | 
			
		||||
#endif
 | 
			
		||||
#endif /* GRID_STD_H */
 | 
			
		||||
 
 | 
			
		||||
@@ -18,12 +18,29 @@
 | 
			
		||||
#pragma push_macro("__CUDA_ARCH__")
 | 
			
		||||
#pragma push_macro("__NVCC__")
 | 
			
		||||
#pragma push_macro("__CUDACC__")
 | 
			
		||||
#undef __CUDA_ARCH__
 | 
			
		||||
#undef __NVCC__
 | 
			
		||||
#undef __CUDACC__
 | 
			
		||||
#undef __CUDA_ARCH__
 | 
			
		||||
#define __NVCC__REDEFINE__
 | 
			
		||||
#endif 
 | 
			
		||||
 | 
			
		||||
/* SYCL save and restore compile environment*/
 | 
			
		||||
#ifdef GRID_SYCL
 | 
			
		||||
#pragma push
 | 
			
		||||
#pragma push_macro("__SYCL_DEVICE_ONLY__")
 | 
			
		||||
#undef __SYCL_DEVICE_ONLY__
 | 
			
		||||
#define EIGEN_DONT_VECTORIZE
 | 
			
		||||
//#undef EIGEN_USE_SYCL
 | 
			
		||||
#define __SYCL__REDEFINE__
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
/* HIP save and restore compile environment*/
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
#pragma push
 | 
			
		||||
#pragma push_macro("__HIP_DEVICE_COMPILE__")
 | 
			
		||||
#endif
 | 
			
		||||
#define EIGEN_NO_HIP
 | 
			
		||||
 | 
			
		||||
#include <Grid/Eigen/Dense>
 | 
			
		||||
#include <Grid/Eigen/unsupported/CXX11/Tensor>
 | 
			
		||||
 | 
			
		||||
@@ -35,7 +52,20 @@
 | 
			
		||||
#pragma pop
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
/*SYCL restore*/
 | 
			
		||||
#ifdef __SYCL__REDEFINE__
 | 
			
		||||
#pragma pop_macro("__SYCL_DEVICE_ONLY__")
 | 
			
		||||
#pragma pop
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
/*HIP restore*/
 | 
			
		||||
#ifdef __HIP__REDEFINE__
 | 
			
		||||
#pragma pop_macro("__HIP_DEVICE_COMPILE__")
 | 
			
		||||
#pragma pop
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#if defined __GNUC__
 | 
			
		||||
#pragma GCC diagnostic pop
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -21,7 +21,8 @@ if BUILD_HDF5
 | 
			
		||||
  extra_headers+=serialisation/Hdf5Type.h
 | 
			
		||||
endif
 | 
			
		||||
 | 
			
		||||
all: version-cache
 | 
			
		||||
 | 
			
		||||
all: version-cache Version.h
 | 
			
		||||
 | 
			
		||||
version-cache:
 | 
			
		||||
	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\
 | 
			
		||||
@@ -42,7 +43,7 @@ version-cache:
 | 
			
		||||
	fi;\
 | 
			
		||||
	rm -f vertmp
 | 
			
		||||
 | 
			
		||||
Version.h:
 | 
			
		||||
Version.h: version-cache
 | 
			
		||||
	cp version-cache Version.h
 | 
			
		||||
 | 
			
		||||
.PHONY: version-cache
 | 
			
		||||
@@ -53,6 +54,17 @@ Version.h:
 | 
			
		||||
include Make.inc
 | 
			
		||||
include Eigen.inc
 | 
			
		||||
 | 
			
		||||
extra_sources+=$(ZWILS_FERMION_FILES)
 | 
			
		||||
extra_sources+=$(WILS_FERMION_FILES)
 | 
			
		||||
extra_sources+=$(STAG_FERMION_FILES)
 | 
			
		||||
if BUILD_GPARITY
 | 
			
		||||
  extra_sources+=$(GP_FERMION_FILES)
 | 
			
		||||
endif
 | 
			
		||||
if BUILD_FERMION_REPS
 | 
			
		||||
  extra_sources+=$(ADJ_FERMION_FILES)
 | 
			
		||||
  extra_sources+=$(TWOIND_FERMION_FILES)
 | 
			
		||||
endif
 | 
			
		||||
 | 
			
		||||
lib_LIBRARIES = libGrid.a
 | 
			
		||||
 | 
			
		||||
CCFILES += $(extra_sources)
 | 
			
		||||
 
 | 
			
		||||
@@ -29,9 +29,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#ifndef GRID_ALGORITHMS_H
 | 
			
		||||
#define GRID_ALGORITHMS_H
 | 
			
		||||
 | 
			
		||||
NAMESPACE_CHECK(algorithms);
 | 
			
		||||
#include <Grid/algorithms/SparseMatrix.h>
 | 
			
		||||
#include <Grid/algorithms/LinearOperator.h>
 | 
			
		||||
#include <Grid/algorithms/Preconditioner.h>
 | 
			
		||||
NAMESPACE_CHECK(SparseMatrix);
 | 
			
		||||
 | 
			
		||||
#include <Grid/algorithms/approx/Zolotarev.h>
 | 
			
		||||
#include <Grid/algorithms/approx/Chebyshev.h>
 | 
			
		||||
@@ -39,14 +41,20 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/algorithms/approx/Remez.h>
 | 
			
		||||
#include <Grid/algorithms/approx/MultiShiftFunction.h>
 | 
			
		||||
#include <Grid/algorithms/approx/Forecast.h>
 | 
			
		||||
 | 
			
		||||
#include <Grid/algorithms/approx/RemezGeneral.h>
 | 
			
		||||
#include <Grid/algorithms/approx/ZMobius.h>
 | 
			
		||||
NAMESPACE_CHECK(approx);
 | 
			
		||||
#include <Grid/algorithms/iterative/Deflation.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/ConjugateGradient.h>
 | 
			
		||||
NAMESPACE_CHECK(ConjGrad);
 | 
			
		||||
#include <Grid/algorithms/iterative/BiCGSTAB.h>
 | 
			
		||||
NAMESPACE_CHECK(BiCGSTAB);
 | 
			
		||||
#include <Grid/algorithms/iterative/ConjugateResidual.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/NormalEquations.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/SchurRedBlack.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/BlockConjugateGradient.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/MinimalResidual.h>
 | 
			
		||||
@@ -58,7 +66,9 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h>
 | 
			
		||||
#include <Grid/algorithms/iterative/PowerMethod.h>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_CHECK(PowerMethod);
 | 
			
		||||
#include <Grid/algorithms/CoarsenedMatrix.h>
 | 
			
		||||
NAMESPACE_CHECK(CoarsendMatrix);
 | 
			
		||||
#include <Grid/algorithms/FFT.h>
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 
 | 
			
		||||
										
											
												File diff suppressed because it is too large
												Load Diff
											
										
									
								
							@@ -1,4 +1,3 @@
 | 
			
		||||
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
@@ -37,7 +36,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#endif
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class scalar> struct FFTW { };
 | 
			
		||||
@@ -191,7 +189,7 @@ public:
 | 
			
		||||
    typedef typename sobj::scalar_type   scalar;
 | 
			
		||||
      
 | 
			
		||||
    Lattice<sobj> pgbuf(&pencil_g);
 | 
			
		||||
    auto pgbuf_v = pgbuf.View();
 | 
			
		||||
    autoView(pgbuf_v , pgbuf, CpuWrite);
 | 
			
		||||
 | 
			
		||||
    typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar;
 | 
			
		||||
    typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan;
 | 
			
		||||
@@ -232,15 +230,18 @@ public:
 | 
			
		||||
    result = source;
 | 
			
		||||
    int pc = processor_coor[dim];
 | 
			
		||||
    for(int p=0;p<processors[dim];p++) {
 | 
			
		||||
      thread_for(idx, sgrid->lSites(),{
 | 
			
		||||
      {
 | 
			
		||||
	autoView(r_v,result,CpuRead);
 | 
			
		||||
	autoView(p_v,pgbuf,CpuWrite);
 | 
			
		||||
	thread_for(idx, sgrid->lSites(),{
 | 
			
		||||
          Coordinate cbuf(Nd);
 | 
			
		||||
          sobj s;
 | 
			
		||||
	  sgrid->LocalIndexToLocalCoor(idx,cbuf);
 | 
			
		||||
	  peekLocalSite(s,result,cbuf);
 | 
			
		||||
	  peekLocalSite(s,r_v,cbuf);
 | 
			
		||||
	  cbuf[dim]+=((pc+p) % processors[dim])*L;
 | 
			
		||||
	  //            cbuf[dim]+=p*L;
 | 
			
		||||
	  pokeLocalSite(s,pgbuf,cbuf);
 | 
			
		||||
      });
 | 
			
		||||
	  pokeLocalSite(s,p_v,cbuf);
 | 
			
		||||
        });
 | 
			
		||||
      }
 | 
			
		||||
      if (p != processors[dim] - 1) {
 | 
			
		||||
	result = Cshift(result,dim,L);
 | 
			
		||||
      }
 | 
			
		||||
@@ -269,15 +270,19 @@ public:
 | 
			
		||||
    flops+= flops_call*NN;
 | 
			
		||||
      
 | 
			
		||||
    // writing out result
 | 
			
		||||
    thread_for(idx,sgrid->lSites(),{
 | 
			
		||||
    {
 | 
			
		||||
      autoView(pgbuf_v,pgbuf,CpuRead);
 | 
			
		||||
      autoView(result_v,result,CpuWrite);
 | 
			
		||||
      thread_for(idx,sgrid->lSites(),{
 | 
			
		||||
	Coordinate clbuf(Nd), cgbuf(Nd);
 | 
			
		||||
	sobj s;
 | 
			
		||||
	sgrid->LocalIndexToLocalCoor(idx,clbuf);
 | 
			
		||||
	cgbuf = clbuf;
 | 
			
		||||
	cgbuf[dim] = clbuf[dim]+L*pc;
 | 
			
		||||
	peekLocalSite(s,pgbuf,cgbuf);
 | 
			
		||||
	pokeLocalSite(s,result,clbuf);
 | 
			
		||||
    });
 | 
			
		||||
	peekLocalSite(s,pgbuf_v,cgbuf);
 | 
			
		||||
	pokeLocalSite(s,result_v,clbuf);
 | 
			
		||||
      });
 | 
			
		||||
    }
 | 
			
		||||
    result = result*div;
 | 
			
		||||
      
 | 
			
		||||
    // destroying plan
 | 
			
		||||
 
 | 
			
		||||
@@ -43,7 +43,6 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class Field> class LinearOperatorBase {
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  // Support for coarsening to a multigrid
 | 
			
		||||
  virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base
 | 
			
		||||
  virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base
 | 
			
		||||
@@ -94,7 +93,10 @@ public:
 | 
			
		||||
    _Mat.Mdag(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
    _Mat.MdagM(in,out,n1,n2);
 | 
			
		||||
    _Mat.MdagM(in,out);
 | 
			
		||||
    ComplexD dot = innerProduct(in,out);
 | 
			
		||||
    n1=real(dot);
 | 
			
		||||
    n2=norm2(out);
 | 
			
		||||
  }
 | 
			
		||||
  void HermOp(const Field &in, Field &out){
 | 
			
		||||
    _Mat.MdagM(in,out);
 | 
			
		||||
@@ -131,17 +133,14 @@ public:
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
    _Mat.MdagM(in,out,n1,n2);
 | 
			
		||||
    out = out + _shift*in;
 | 
			
		||||
 | 
			
		||||
    ComplexD dot;	
 | 
			
		||||
    dot= innerProduct(in,out);
 | 
			
		||||
    HermOp(in,out);
 | 
			
		||||
    ComplexD dot = innerProduct(in,out);
 | 
			
		||||
    n1=real(dot);
 | 
			
		||||
    n2=norm2(out);
 | 
			
		||||
  }
 | 
			
		||||
  void HermOp(const Field &in, Field &out){
 | 
			
		||||
    RealD n1,n2;
 | 
			
		||||
    HermOpAndNorm(in,out,n1,n2);
 | 
			
		||||
    _Mat.MdagM(in,out);
 | 
			
		||||
    out = out + _shift*in;
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
@@ -170,7 +169,7 @@ public:
 | 
			
		||||
    _Mat.M(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
    _Mat.M(in,out);
 | 
			
		||||
    HermOp(in,out);
 | 
			
		||||
    ComplexD dot= innerProduct(in,out); n1=real(dot);
 | 
			
		||||
    n2=norm2(out);
 | 
			
		||||
  }
 | 
			
		||||
@@ -208,212 +207,305 @@ public:
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
    //////////////////////////////////////////////////////////
 | 
			
		||||
    // Even Odd Schur decomp operators; there are several
 | 
			
		||||
    // ways to introduce the even odd checkerboarding
 | 
			
		||||
    //////////////////////////////////////////////////////////
 | 
			
		||||
//////////////////////////////////////////////////////////
 | 
			
		||||
// Even Odd Schur decomp operators; there are several
 | 
			
		||||
// ways to introduce the even odd checkerboarding
 | 
			
		||||
//////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
    template<class Field>
 | 
			
		||||
    class SchurOperatorBase :  public LinearOperatorBase<Field> {
 | 
			
		||||
    public:
 | 
			
		||||
      virtual  RealD Mpc      (const Field &in, Field &out) =0;
 | 
			
		||||
      virtual  RealD MpcDag   (const Field &in, Field &out) =0;
 | 
			
		||||
      virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) {
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
      tmp.Checkerboard() = in.Checkerboard();
 | 
			
		||||
	ni=Mpc(in,tmp);
 | 
			
		||||
	no=MpcDag(tmp,out);
 | 
			
		||||
      }
 | 
			
		||||
      virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
      out.Checkerboard() = in.Checkerboard();
 | 
			
		||||
	MpcDagMpc(in,out,n1,n2);
 | 
			
		||||
      }
 | 
			
		||||
      virtual void HermOp(const Field &in, Field &out){
 | 
			
		||||
	RealD n1,n2;
 | 
			
		||||
	HermOpAndNorm(in,out,n1,n2);
 | 
			
		||||
      }
 | 
			
		||||
      void Op     (const Field &in, Field &out){
 | 
			
		||||
	Mpc(in,out);
 | 
			
		||||
      }
 | 
			
		||||
      void AdjOp     (const Field &in, Field &out){ 
 | 
			
		||||
	MpcDag(in,out);
 | 
			
		||||
      }
 | 
			
		||||
      // Support for coarsening to a multigrid
 | 
			
		||||
      void OpDiag (const Field &in, Field &out) {
 | 
			
		||||
	assert(0); // must coarsen the unpreconditioned system
 | 
			
		||||
      }
 | 
			
		||||
      void OpDir  (const Field &in, Field &out,int dir,int disp) {
 | 
			
		||||
	assert(0);
 | 
			
		||||
      }
 | 
			
		||||
      void OpDirAll  (const Field &in, std::vector<Field> &out){
 | 
			
		||||
	assert(0);
 | 
			
		||||
      };
 | 
			
		||||
    };
 | 
			
		||||
    template<class Matrix,class Field>
 | 
			
		||||
    class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
    public:
 | 
			
		||||
      Matrix &_Mat;
 | 
			
		||||
      SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
      virtual  RealD Mpc      (const Field &in, Field &out) {
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
      tmp.Checkerboard() = !in.Checkerboard();
 | 
			
		||||
	//std::cout <<"grid pointers: in._grid="<< in._grid << " out._grid=" << out._grid << "  _Mat.Grid=" << _Mat.Grid() << " _Mat.RedBlackGrid=" << _Mat.RedBlackGrid() << std::endl;
 | 
			
		||||
 | 
			
		||||
	_Mat.Meooe(in,tmp);
 | 
			
		||||
	_Mat.MooeeInv(tmp,out);
 | 
			
		||||
	_Mat.Meooe(out,tmp);
 | 
			
		||||
 | 
			
		||||
      //std::cout << "cb in " << in.Checkerboard() << "  cb out " << out.Checkerboard() << std::endl;
 | 
			
		||||
	_Mat.Mooee(in,out);
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,out);
 | 
			
		||||
      }
 | 
			
		||||
      virtual  RealD MpcDag   (const Field &in, Field &out){
 | 
			
		||||
	Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
	_Mat.MeooeDag(in,tmp);
 | 
			
		||||
        _Mat.MooeeInvDag(tmp,out);
 | 
			
		||||
	_Mat.MeooeDag(out,tmp);
 | 
			
		||||
 | 
			
		||||
	_Mat.MooeeDag(in,out);
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,out);
 | 
			
		||||
      }
 | 
			
		||||
    };
 | 
			
		||||
    template<class Matrix,class Field>
 | 
			
		||||
      class SchurDiagOneOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
    protected:
 | 
			
		||||
      Matrix &_Mat;
 | 
			
		||||
    public:
 | 
			
		||||
      SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
 | 
			
		||||
      virtual  RealD Mpc      (const Field &in, Field &out) {
 | 
			
		||||
	Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
	_Mat.Meooe(in,out);
 | 
			
		||||
	_Mat.MooeeInv(out,tmp);
 | 
			
		||||
	_Mat.Meooe(tmp,out);
 | 
			
		||||
	_Mat.MooeeInv(out,tmp);
 | 
			
		||||
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,in);
 | 
			
		||||
      }
 | 
			
		||||
      virtual  RealD MpcDag   (const Field &in, Field &out){
 | 
			
		||||
	Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
	_Mat.MooeeInvDag(in,out);
 | 
			
		||||
	_Mat.MeooeDag(out,tmp);
 | 
			
		||||
	_Mat.MooeeInvDag(tmp,out);
 | 
			
		||||
	_Mat.MeooeDag(out,tmp);
 | 
			
		||||
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,in);
 | 
			
		||||
      }
 | 
			
		||||
    };
 | 
			
		||||
    template<class Matrix,class Field>
 | 
			
		||||
      class SchurDiagTwoOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
    protected:
 | 
			
		||||
      Matrix &_Mat;
 | 
			
		||||
    public:
 | 
			
		||||
      SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
 | 
			
		||||
      virtual  RealD Mpc      (const Field &in, Field &out) {
 | 
			
		||||
	Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
	_Mat.MooeeInv(in,out);
 | 
			
		||||
	_Mat.Meooe(out,tmp);
 | 
			
		||||
	_Mat.MooeeInv(tmp,out);
 | 
			
		||||
	_Mat.Meooe(out,tmp);
 | 
			
		||||
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,in);
 | 
			
		||||
      }
 | 
			
		||||
      virtual  RealD MpcDag   (const Field &in, Field &out){
 | 
			
		||||
	Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
	_Mat.MeooeDag(in,out);
 | 
			
		||||
	_Mat.MooeeInvDag(out,tmp);
 | 
			
		||||
	_Mat.MeooeDag(tmp,out);
 | 
			
		||||
	_Mat.MooeeInvDag(out,tmp);
 | 
			
		||||
 | 
			
		||||
	return axpy_norm(out,-1.0,tmp,in);
 | 
			
		||||
      }
 | 
			
		||||
    };
 | 
			
		||||
    ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
    // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta
 | 
			
		||||
    // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi
 | 
			
		||||
    ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
    template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ;
 | 
			
		||||
    template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ;
 | 
			
		||||
    ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
    //  Staggered use
 | 
			
		||||
    ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
    template<class Matrix,class Field>
 | 
			
		||||
      class SchurStaggeredOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
    protected:
 | 
			
		||||
      Matrix &_Mat;
 | 
			
		||||
      Field tmp;
 | 
			
		||||
      RealD mass;
 | 
			
		||||
      double tMpc;
 | 
			
		||||
      double tIP;
 | 
			
		||||
      double tMeo;
 | 
			
		||||
      double taxpby_norm;
 | 
			
		||||
      uint64_t ncall;
 | 
			
		||||
public:
 | 
			
		||||
      void Report(void)
 | 
			
		||||
      {
 | 
			
		||||
	std::cout << GridLogMessage << " HermOpAndNorm.Mpc "<< tMpc/ncall<<" usec "<<std::endl;
 | 
			
		||||
	std::cout << GridLogMessage << " HermOpAndNorm.IP  "<< tIP /ncall<<" usec "<<std::endl;
 | 
			
		||||
	std::cout << GridLogMessage << " Mpc.MeoMoe        "<< tMeo/ncall<<" usec "<<std::endl;
 | 
			
		||||
	std::cout << GridLogMessage << " Mpc.axpby_norm    "<< taxpby_norm/ncall<<" usec "<<std::endl;
 | 
			
		||||
      }
 | 
			
		||||
      SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid()) 
 | 
			
		||||
      { 
 | 
			
		||||
	assert( _Mat.isTrivialEE() );
 | 
			
		||||
	mass = _Mat.Mass();
 | 
			
		||||
	tMpc=0;
 | 
			
		||||
	tIP =0;
 | 
			
		||||
        tMeo=0;
 | 
			
		||||
        taxpby_norm=0;
 | 
			
		||||
	ncall=0;
 | 
			
		||||
      }
 | 
			
		||||
template<class Field>
 | 
			
		||||
class SchurOperatorBase :  public LinearOperatorBase<Field> {
 | 
			
		||||
 public:
 | 
			
		||||
  virtual  void Mpc      (const Field &in, Field &out) =0;
 | 
			
		||||
  virtual  void MpcDag   (const Field &in, Field &out) =0;
 | 
			
		||||
  virtual  void MpcDagMpc(const Field &in, Field &out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    tmp.Checkerboard() = in.Checkerboard();
 | 
			
		||||
    Mpc(in,tmp);
 | 
			
		||||
    MpcDag(tmp,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
	ncall++;
 | 
			
		||||
	tMpc-=usecond();
 | 
			
		||||
    n2 = Mpc(in,out);
 | 
			
		||||
	tMpc+=usecond();
 | 
			
		||||
	tIP-=usecond();
 | 
			
		||||
    ComplexD dot= innerProduct(in,out);
 | 
			
		||||
	tIP+=usecond();
 | 
			
		||||
    n1 = real(dot);
 | 
			
		||||
    out.Checkerboard() = in.Checkerboard();
 | 
			
		||||
    MpcDagMpc(in,out);
 | 
			
		||||
    ComplexD dot= innerProduct(in,out); 
 | 
			
		||||
    n1=real(dot);
 | 
			
		||||
    n2=norm2(out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOp(const Field &in, Field &out){
 | 
			
		||||
	ncall++;
 | 
			
		||||
	tMpc-=usecond();
 | 
			
		||||
	_Mat.Meooe(in,out);
 | 
			
		||||
	_Mat.Meooe(out,tmp);
 | 
			
		||||
	tMpc+=usecond();
 | 
			
		||||
	taxpby_norm-=usecond();
 | 
			
		||||
	axpby(out,-1.0,mass*mass,tmp,in);
 | 
			
		||||
	taxpby_norm+=usecond();
 | 
			
		||||
    out.Checkerboard() = in.Checkerboard();
 | 
			
		||||
    MpcDagMpc(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual  RealD Mpc      (const Field &in, Field &out) 
 | 
			
		||||
  {
 | 
			
		||||
  void Op     (const Field &in, Field &out){
 | 
			
		||||
    Mpc(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  void AdjOp     (const Field &in, Field &out){ 
 | 
			
		||||
    MpcDag(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  // Support for coarsening to a multigrid
 | 
			
		||||
  void OpDiag (const Field &in, Field &out) {
 | 
			
		||||
    assert(0); // must coarsen the unpreconditioned system
 | 
			
		||||
  }
 | 
			
		||||
  void OpDir  (const Field &in, Field &out,int dir,int disp) {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  void OpDirAll  (const Field &in, std::vector<Field> &out){
 | 
			
		||||
    assert(0);
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
template<class Matrix,class Field>
 | 
			
		||||
  class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
 public:
 | 
			
		||||
    Matrix &_Mat;
 | 
			
		||||
    SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
    virtual  void Mpc      (const Field &in, Field &out) {
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
      tmp.Checkerboard() = !in.Checkerboard();
 | 
			
		||||
      
 | 
			
		||||
      _Mat.Meooe(in,tmp);
 | 
			
		||||
      _Mat.MooeeInv(tmp,out);
 | 
			
		||||
      _Mat.Meooe(out,tmp);
 | 
			
		||||
      _Mat.Mooee(in,out);
 | 
			
		||||
      axpy(out,-1.0,tmp,out);
 | 
			
		||||
    }
 | 
			
		||||
    virtual void MpcDag   (const Field &in, Field &out){
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
	
 | 
			
		||||
      _Mat.MeooeDag(in,tmp);
 | 
			
		||||
      _Mat.MooeeInvDag(tmp,out);
 | 
			
		||||
      _Mat.MeooeDag(out,tmp);
 | 
			
		||||
      _Mat.MooeeDag(in,out);
 | 
			
		||||
      axpy(out,-1.0,tmp,out);
 | 
			
		||||
    }
 | 
			
		||||
};
 | 
			
		||||
template<class Matrix,class Field>
 | 
			
		||||
  class SchurDiagOneOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
 protected:
 | 
			
		||||
    Matrix &_Mat;
 | 
			
		||||
 public:
 | 
			
		||||
    SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
    
 | 
			
		||||
    virtual void Mpc      (const Field &in, Field &out) {
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
      _Mat.Meooe(in,out);
 | 
			
		||||
      _Mat.MooeeInv(out,tmp);
 | 
			
		||||
      _Mat.Meooe(tmp,out);
 | 
			
		||||
      _Mat.MooeeInv(out,tmp);
 | 
			
		||||
      axpy(out,-1.0,tmp,in);
 | 
			
		||||
    }
 | 
			
		||||
    virtual void MpcDag   (const Field &in, Field &out){
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
      
 | 
			
		||||
      _Mat.MooeeInvDag(in,out);
 | 
			
		||||
      _Mat.MeooeDag(out,tmp);
 | 
			
		||||
      _Mat.MooeeInvDag(tmp,out);
 | 
			
		||||
      _Mat.MeooeDag(out,tmp);
 | 
			
		||||
      axpy(out,-1.0,tmp,in);
 | 
			
		||||
    }
 | 
			
		||||
};
 | 
			
		||||
template<class Matrix,class Field>
 | 
			
		||||
  class SchurDiagTwoOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
 protected:
 | 
			
		||||
    Matrix &_Mat;
 | 
			
		||||
 public:
 | 
			
		||||
    SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){};
 | 
			
		||||
    
 | 
			
		||||
    virtual void Mpc      (const Field &in, Field &out) {
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
      
 | 
			
		||||
      _Mat.MooeeInv(in,out);
 | 
			
		||||
      _Mat.Meooe(out,tmp);
 | 
			
		||||
      _Mat.MooeeInv(tmp,out);
 | 
			
		||||
      _Mat.Meooe(out,tmp);
 | 
			
		||||
      
 | 
			
		||||
      axpy(out,-1.0,tmp,in);
 | 
			
		||||
    }
 | 
			
		||||
    virtual  void MpcDag   (const Field &in, Field &out){
 | 
			
		||||
      Field tmp(in.Grid());
 | 
			
		||||
 | 
			
		||||
      _Mat.MeooeDag(in,out);
 | 
			
		||||
      _Mat.MooeeInvDag(out,tmp);
 | 
			
		||||
      _Mat.MeooeDag(tmp,out);
 | 
			
		||||
      _Mat.MooeeInvDag(out,tmp);
 | 
			
		||||
 | 
			
		||||
      axpy(out,-1.0,tmp,in);
 | 
			
		||||
    }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
class NonHermitianSchurOperatorBase :  public LinearOperatorBase<Field> 
 | 
			
		||||
{
 | 
			
		||||
 public:
 | 
			
		||||
  virtual void  Mpc      (const Field& in, Field& out) = 0;
 | 
			
		||||
  virtual void  MpcDag   (const Field& in, Field& out) = 0;
 | 
			
		||||
  virtual void  MpcDagMpc(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    tmp.Checkerboard() = in.Checkerboard();
 | 
			
		||||
    Mpc(in,tmp);
 | 
			
		||||
    MpcDag(tmp,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOp(const Field& in, Field& out) {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  void Op(const Field& in, Field& out) {
 | 
			
		||||
    Mpc(in, out);
 | 
			
		||||
  }
 | 
			
		||||
  void AdjOp(const Field& in, Field& out) { 
 | 
			
		||||
    MpcDag(in, out);
 | 
			
		||||
  }
 | 
			
		||||
  // Support for coarsening to a multigrid
 | 
			
		||||
  void OpDiag(const Field& in, Field& out) {
 | 
			
		||||
    assert(0); // must coarsen the unpreconditioned system
 | 
			
		||||
  }
 | 
			
		||||
  void OpDir(const Field& in, Field& out, int dir, int disp) {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  void OpDirAll(const Field& in, std::vector<Field>& out){
 | 
			
		||||
    assert(0);
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class Matrix, class Field>
 | 
			
		||||
class NonHermitianSchurDiagMooeeOperator :  public NonHermitianSchurOperatorBase<Field> 
 | 
			
		||||
{
 | 
			
		||||
 public:
 | 
			
		||||
  Matrix& _Mat;
 | 
			
		||||
 NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){};
 | 
			
		||||
  virtual void Mpc(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    tmp.Checkerboard() = !in.Checkerboard();
 | 
			
		||||
    
 | 
			
		||||
    _Mat.Meooe(in, tmp);
 | 
			
		||||
    _Mat.MooeeInv(tmp, out);
 | 
			
		||||
    _Mat.Meooe(out, tmp);
 | 
			
		||||
    
 | 
			
		||||
    _Mat.Mooee(in, out);
 | 
			
		||||
    
 | 
			
		||||
    axpy(out, -1.0, tmp, out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void MpcDag(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    
 | 
			
		||||
    _Mat.MeooeDag(in, tmp);
 | 
			
		||||
    _Mat.MooeeInvDag(tmp, out);
 | 
			
		||||
    _Mat.MeooeDag(out, tmp);
 | 
			
		||||
	  
 | 
			
		||||
    _Mat.MooeeDag(in, out);
 | 
			
		||||
    
 | 
			
		||||
    axpy(out, -1.0, tmp, out);
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
    
 | 
			
		||||
template<class Matrix,class Field>
 | 
			
		||||
class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field> 
 | 
			
		||||
{
 | 
			
		||||
 protected:
 | 
			
		||||
  Matrix &_Mat;
 | 
			
		||||
  
 | 
			
		||||
 public:
 | 
			
		||||
  NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){};
 | 
			
		||||
  virtual void Mpc(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
	  
 | 
			
		||||
    _Mat.Meooe(in, out);
 | 
			
		||||
    _Mat.MooeeInv(out, tmp);
 | 
			
		||||
    _Mat.Meooe(tmp, out);
 | 
			
		||||
    _Mat.MooeeInv(out, tmp);
 | 
			
		||||
 | 
			
		||||
    axpy(out, -1.0, tmp, in);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void MpcDag(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    
 | 
			
		||||
    _Mat.MooeeInvDag(in, out);
 | 
			
		||||
    _Mat.MeooeDag(out, tmp);
 | 
			
		||||
    _Mat.MooeeInvDag(tmp, out);
 | 
			
		||||
    _Mat.MeooeDag(out, tmp);
 | 
			
		||||
    
 | 
			
		||||
    axpy(out, -1.0, tmp, in);
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class Matrix, class Field>
 | 
			
		||||
class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field> 
 | 
			
		||||
{
 | 
			
		||||
 protected:
 | 
			
		||||
  Matrix& _Mat;
 | 
			
		||||
  
 | 
			
		||||
 public:
 | 
			
		||||
 NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){};
 | 
			
		||||
 | 
			
		||||
  virtual void Mpc(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    
 | 
			
		||||
    _Mat.MooeeInv(in, out);
 | 
			
		||||
    _Mat.Meooe(out, tmp);
 | 
			
		||||
    _Mat.MooeeInv(tmp, out);
 | 
			
		||||
    _Mat.Meooe(out, tmp);
 | 
			
		||||
 | 
			
		||||
    axpy(out, -1.0, tmp, in);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void MpcDag(const Field& in, Field& out) {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    
 | 
			
		||||
    _Mat.MeooeDag(in, out);
 | 
			
		||||
    _Mat.MooeeInvDag(out, tmp);
 | 
			
		||||
    _Mat.MeooeDag(tmp, out);
 | 
			
		||||
    _Mat.MooeeInvDag(out, tmp);
 | 
			
		||||
 | 
			
		||||
    axpy(out, -1.0, tmp, in);
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta
 | 
			
		||||
// Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ;
 | 
			
		||||
template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ;
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
//  Staggered use
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class Matrix,class Field>
 | 
			
		||||
class SchurStaggeredOperator :  public SchurOperatorBase<Field> {
 | 
			
		||||
 protected:
 | 
			
		||||
  Matrix &_Mat;
 | 
			
		||||
  Field tmp;
 | 
			
		||||
  RealD mass;
 | 
			
		||||
 public:
 | 
			
		||||
  SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid()) 
 | 
			
		||||
  { 
 | 
			
		||||
    assert( _Mat.isTrivialEE() );
 | 
			
		||||
    mass = _Mat.Mass();
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
 | 
			
		||||
    Mpc(in,out);
 | 
			
		||||
    ComplexD dot= innerProduct(in,out);
 | 
			
		||||
    n1 = real(dot);
 | 
			
		||||
    n2 =0.0;
 | 
			
		||||
  }
 | 
			
		||||
  virtual void HermOp(const Field &in, Field &out){
 | 
			
		||||
    Mpc(in,out);
 | 
			
		||||
    //    _Mat.Meooe(in,out);
 | 
			
		||||
    //    _Mat.Meooe(out,tmp);
 | 
			
		||||
    //    axpby(out,-1.0,mass*mass,tmp,in);
 | 
			
		||||
  }
 | 
			
		||||
  virtual  void Mpc      (const Field &in, Field &out) 
 | 
			
		||||
  {
 | 
			
		||||
    Field tmp(in.Grid());
 | 
			
		||||
    Field tmp2(in.Grid());
 | 
			
		||||
	
 | 
			
		||||
    //    _Mat.Mooee(in,out);
 | 
			
		||||
    //    _Mat.Mooee(out,tmp);
 | 
			
		||||
 | 
			
		||||
    //    std::cout << GridLogIterative << " HermOp.Mpc "<<std::endl;
 | 
			
		||||
    _Mat.Mooee(in,out);
 | 
			
		||||
    _Mat.Mooee(out,tmp);
 | 
			
		||||
    //    std::cout << GridLogIterative << " HermOp.MooeeMooee "<<std::endl;
 | 
			
		||||
 | 
			
		||||
    tMeo-=usecond();
 | 
			
		||||
    _Mat.Meooe(in,out);
 | 
			
		||||
    _Mat.Meooe(out,tmp);
 | 
			
		||||
    tMeo+=usecond();
 | 
			
		||||
    taxpby_norm-=usecond();
 | 
			
		||||
    RealD nn=axpby_norm(out,-1.0,mass*mass,tmp,in);
 | 
			
		||||
    taxpby_norm+=usecond();
 | 
			
		||||
    return nn;
 | 
			
		||||
    axpby(out,-1.0,mass*mass,tmp,in);
 | 
			
		||||
  }
 | 
			
		||||
  virtual  RealD MpcDag   (const Field &in, Field &out){
 | 
			
		||||
    return Mpc(in,out);
 | 
			
		||||
  virtual  void MpcDag   (const Field &in, Field &out){
 | 
			
		||||
    Mpc(in,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) {
 | 
			
		||||
    assert(0);// Never need with staggered
 | 
			
		||||
@@ -421,7 +513,6 @@ public:
 | 
			
		||||
};
 | 
			
		||||
template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>;
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
// Base classes for functions of operators
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
 
 | 
			
		||||
@@ -38,16 +38,12 @@ template<class Field> class SparseMatrixBase {
 | 
			
		||||
public:
 | 
			
		||||
  virtual GridBase *Grid(void) =0;
 | 
			
		||||
  // Full checkerboar operations
 | 
			
		||||
  virtual RealD M    (const Field &in, Field &out)=0;
 | 
			
		||||
  virtual RealD Mdag (const Field &in, Field &out)=0;
 | 
			
		||||
  virtual void  MdagM(const Field &in, Field &out,RealD &ni,RealD &no) {
 | 
			
		||||
    Field tmp (in.Grid());
 | 
			
		||||
    ni=M(in,tmp);
 | 
			
		||||
    no=Mdag(tmp,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual void  M    (const Field &in, Field &out)=0;
 | 
			
		||||
  virtual void  Mdag (const Field &in, Field &out)=0;
 | 
			
		||||
  virtual void  MdagM(const Field &in, Field &out) {
 | 
			
		||||
    RealD ni, no;
 | 
			
		||||
    MdagM(in,out,ni,no);
 | 
			
		||||
    Field tmp (in.Grid());
 | 
			
		||||
    M(in,tmp);
 | 
			
		||||
    Mdag(tmp,out);
 | 
			
		||||
  }
 | 
			
		||||
  virtual  void Mdiag    (const Field &in, Field &out)=0;
 | 
			
		||||
  virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0;
 | 
			
		||||
 
 | 
			
		||||
@@ -234,10 +234,8 @@ public:
 | 
			
		||||
 | 
			
		||||
    GridBase *grid=in.Grid();
 | 
			
		||||
 | 
			
		||||
    // std::cout << "Chevyshef(): in.Grid()="<<in.Grid()<<std::endl;
 | 
			
		||||
    //std::cout <<" Linop.Grid()="<<Linop.Grid()<<"Linop.RedBlackGrid()="<<Linop.RedBlackGrid()<<std::endl;
 | 
			
		||||
 | 
			
		||||
    int vol=grid->gSites();
 | 
			
		||||
    typedef typename Field::vector_type vector_type;
 | 
			
		||||
 | 
			
		||||
    Field T0(grid); T0 = in;  
 | 
			
		||||
    Field T1(grid); 
 | 
			
		||||
@@ -258,14 +256,28 @@ public:
 | 
			
		||||
    //    out = ()*T0 + Coeffs[1]*T1;
 | 
			
		||||
    axpby(out,0.5*Coeffs[0],Coeffs[1],T0,T1);
 | 
			
		||||
    for(int n=2;n<order;n++){
 | 
			
		||||
	
 | 
			
		||||
 | 
			
		||||
      Linop.HermOp(*Tn,y);
 | 
			
		||||
      //     y=xscale*y+mscale*(*Tn);
 | 
			
		||||
      //      *Tnp=2.0*y-(*Tnm);
 | 
			
		||||
      //      out=out+Coeffs[n]* (*Tnp);
 | 
			
		||||
#if 0
 | 
			
		||||
      auto y_v = y.View();
 | 
			
		||||
      auto Tn_v = Tn->View();
 | 
			
		||||
      auto Tnp_v = Tnp->View();
 | 
			
		||||
      auto Tnm_v = Tnm->View();
 | 
			
		||||
      constexpr int Nsimd = vector_type::Nsimd();
 | 
			
		||||
      accelerator_forNB(ss, in.Grid()->oSites(), Nsimd, {
 | 
			
		||||
	  coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss));
 | 
			
		||||
	  coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss));
 | 
			
		||||
      });
 | 
			
		||||
      if ( Coeffs[n] != 0.0) {
 | 
			
		||||
	axpy(out,Coeffs[n],*Tnp,out);
 | 
			
		||||
      }
 | 
			
		||||
#else
 | 
			
		||||
      axpby(y,xscale,mscale,y,(*Tn));
 | 
			
		||||
      axpby(*Tnp,2.0,-1.0,y,(*Tnm));
 | 
			
		||||
      axpy(out,Coeffs[n],*Tnp,out);
 | 
			
		||||
      if ( Coeffs[n] != 0.0) {
 | 
			
		||||
	axpy(out,Coeffs[n],*Tnp,out);
 | 
			
		||||
      }
 | 
			
		||||
#endif
 | 
			
		||||
      // Cycle pointers to avoid copies
 | 
			
		||||
      Field *swizzle = Tnm;
 | 
			
		||||
      Tnm    =Tn;
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,473 @@
 | 
			
		||||
#include<math.h>
 | 
			
		||||
#include<stdio.h>
 | 
			
		||||
#include<stdlib.h>
 | 
			
		||||
#include<string>
 | 
			
		||||
#include<iostream>
 | 
			
		||||
#include<iomanip>
 | 
			
		||||
#include<cassert>
 | 
			
		||||
 | 
			
		||||
#include<Grid/algorithms/approx/RemezGeneral.h>
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
// Constructor
 | 
			
		||||
AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision,
 | 
			
		||||
				 bigfloat (*f)(bigfloat x, void *data), void *data): f(f), 
 | 
			
		||||
										     data(data), 
 | 
			
		||||
										     prec(precision),
 | 
			
		||||
										     apstrt(lower), apend(upper), apwidt(upper - lower),
 | 
			
		||||
										     n(0), d(0), pow_n(0), pow_d(0)
 | 
			
		||||
{
 | 
			
		||||
  bigfloat::setDefaultPrecision(prec);
 | 
			
		||||
 | 
			
		||||
  std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n";
 | 
			
		||||
  std::cout<<"Precision of arithmetic is "<<precision<<std::endl;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//Determine the properties of the numerator and denominator polynomials
 | 
			
		||||
void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){
 | 
			
		||||
  pow_n = num_degree;
 | 
			
		||||
  pow_d = den_degree;
 | 
			
		||||
 | 
			
		||||
  if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0);
 | 
			
		||||
  if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0);
 | 
			
		||||
 | 
			
		||||
  if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0);
 | 
			
		||||
  if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0);
 | 
			
		||||
 | 
			
		||||
  num_type = num_type_in;
 | 
			
		||||
  den_type = den_type_in;
 | 
			
		||||
 | 
			
		||||
  num_pows.resize(pow_n+1);
 | 
			
		||||
  den_pows.resize(pow_d+1);
 | 
			
		||||
 | 
			
		||||
  int n_in = 0;
 | 
			
		||||
  bool odd = num_type == PolyType::Full || num_type == PolyType::Odd;
 | 
			
		||||
  bool even = num_type == PolyType::Full || num_type == PolyType::Even;
 | 
			
		||||
  for(int i=0;i<=pow_n;i++){
 | 
			
		||||
    num_pows[i] = -1;
 | 
			
		||||
    if(i % 2 == 0 && even) num_pows[i] = n_in++;
 | 
			
		||||
    if(i % 2 == 1 && odd) num_pows[i] = n_in++;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  std::cout << n_in << " terms in numerator" << std::endl;
 | 
			
		||||
  --n_in; //power is 1 less than the number of terms, eg  pow=1   a x^1  + b x^0
 | 
			
		||||
 | 
			
		||||
  int d_in = 0;
 | 
			
		||||
  odd = den_type == PolyType::Full || den_type == PolyType::Odd;
 | 
			
		||||
  even = den_type == PolyType::Full || den_type == PolyType::Even;
 | 
			
		||||
  for(int i=0;i<=pow_d;i++){
 | 
			
		||||
    den_pows[i] = -1;
 | 
			
		||||
    if(i % 2 == 0 && even) den_pows[i] = d_in++;
 | 
			
		||||
    if(i % 2 == 1 && odd) den_pows[i] = d_in++;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  std::cout << d_in << " terms in denominator" << std::endl;
 | 
			
		||||
  --d_in;
 | 
			
		||||
 | 
			
		||||
  n = n_in;
 | 
			
		||||
  d = d_in;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//Setup algorithm
 | 
			
		||||
void AlgRemezGeneral::reinitializeAlgorithm(){
 | 
			
		||||
  spread = 1.0e37;
 | 
			
		||||
  iter = 0;
 | 
			
		||||
 | 
			
		||||
  neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1
 | 
			
		||||
 | 
			
		||||
  param.resize(neq);
 | 
			
		||||
  yy.resize(neq+1);
 | 
			
		||||
 | 
			
		||||
  //Initialize linear equation temporaries
 | 
			
		||||
  A.resize(neq*neq);
 | 
			
		||||
  B.resize(neq);
 | 
			
		||||
  IPS.resize(neq);
 | 
			
		||||
 | 
			
		||||
  //Initialize maximum and minimum errors
 | 
			
		||||
  xx.resize(neq+2);
 | 
			
		||||
  mm.resize(neq+1);
 | 
			
		||||
  initialGuess();
 | 
			
		||||
 | 
			
		||||
  //Initialize search steps
 | 
			
		||||
  step.resize(neq+1);
 | 
			
		||||
  stpini();
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree, 
 | 
			
		||||
				       const PolyType num_type_in, const PolyType den_type_in, 
 | 
			
		||||
				       const double _tolerance, const int report_freq){
 | 
			
		||||
  //Setup the properties of the polynomial
 | 
			
		||||
  setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in);
 | 
			
		||||
 | 
			
		||||
  //Setup the algorithm
 | 
			
		||||
  reinitializeAlgorithm();
 | 
			
		||||
 | 
			
		||||
  bigfloat tolerance = _tolerance;
 | 
			
		||||
 | 
			
		||||
  //Iterate until convergance
 | 
			
		||||
  while (spread > tolerance) { 
 | 
			
		||||
    if (iter++ % report_freq==0)
 | 
			
		||||
      std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl; 
 | 
			
		||||
 | 
			
		||||
    equations();
 | 
			
		||||
    if (delta < tolerance) {
 | 
			
		||||
      std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n";
 | 
			
		||||
      assert(0);
 | 
			
		||||
    };    
 | 
			
		||||
    assert( delta>= tolerance );
 | 
			
		||||
 | 
			
		||||
    search();
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  int sign;
 | 
			
		||||
  double error = (double)getErr(mm[0],&sign);
 | 
			
		||||
  std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl;
 | 
			
		||||
 | 
			
		||||
  // Return the maximum error in the approximation
 | 
			
		||||
  return error;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
// Initial values of maximal and minimal errors
 | 
			
		||||
void AlgRemezGeneral::initialGuess(){
 | 
			
		||||
  // Supply initial guesses for solution points
 | 
			
		||||
  long ncheb = neq;			// Degree of Chebyshev error estimate
 | 
			
		||||
 | 
			
		||||
  // Find ncheb+1 extrema of Chebyshev polynomial
 | 
			
		||||
  bigfloat a = ncheb;
 | 
			
		||||
  bigfloat r;
 | 
			
		||||
 | 
			
		||||
  mm[0] = apstrt;
 | 
			
		||||
  for (long i = 1; i < ncheb; i++) {
 | 
			
		||||
    r = 0.5 * (1 - cos((M_PI * i)/(double) a));
 | 
			
		||||
    //r *= sqrt_bf(r);
 | 
			
		||||
    r = (exp((double)r)-1.0)/(exp(1.0)-1.0);
 | 
			
		||||
    mm[i] = apstrt + r * apwidt;
 | 
			
		||||
  }
 | 
			
		||||
  mm[ncheb] = apend;
 | 
			
		||||
 | 
			
		||||
  a = 2.0 * ncheb;
 | 
			
		||||
  for (long i = 0; i <= ncheb; i++) {
 | 
			
		||||
    r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a));
 | 
			
		||||
    //r *= sqrt_bf(r); // Squeeze to low end of interval
 | 
			
		||||
    r = (exp((double)r)-1.0)/(exp(1.0)-1.0);
 | 
			
		||||
    xx[i] = apstrt + r * apwidt;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Initialise step sizes
 | 
			
		||||
void AlgRemezGeneral::stpini(){
 | 
			
		||||
  xx[neq+1] = apend;
 | 
			
		||||
  delta = 0.25;
 | 
			
		||||
  step[0] = xx[0] - apstrt;
 | 
			
		||||
  for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1];
 | 
			
		||||
  step[neq] = step[neq-1];
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Search for error maxima and minima
 | 
			
		||||
void AlgRemezGeneral::search(){
 | 
			
		||||
  bigfloat a, q, xm, ym, xn, yn, xx1;
 | 
			
		||||
  int emsign, ensign, steps;
 | 
			
		||||
 | 
			
		||||
  int meq = neq + 1;
 | 
			
		||||
 | 
			
		||||
  bigfloat eclose = 1.0e30;
 | 
			
		||||
  bigfloat farther = 0l;
 | 
			
		||||
 | 
			
		||||
  bigfloat xx0 = apstrt;
 | 
			
		||||
 | 
			
		||||
  for (int i = 0; i < meq; i++) {
 | 
			
		||||
    steps = 0;
 | 
			
		||||
    xx1 = xx[i]; // Next zero
 | 
			
		||||
    if (i == meq-1) xx1 = apend;
 | 
			
		||||
    xm = mm[i];
 | 
			
		||||
    ym = getErr(xm,&emsign);
 | 
			
		||||
    q = step[i];
 | 
			
		||||
    xn = xm + q;
 | 
			
		||||
    if (xn < xx0 || xn >= xx1) {	// Cannot skip over adjacent boundaries
 | 
			
		||||
      q = -q;
 | 
			
		||||
      xn = xm;
 | 
			
		||||
      yn = ym;
 | 
			
		||||
      ensign = emsign;
 | 
			
		||||
    } else {
 | 
			
		||||
      yn = getErr(xn,&ensign);
 | 
			
		||||
      if (yn < ym) {
 | 
			
		||||
	q = -q;
 | 
			
		||||
	xn = xm;
 | 
			
		||||
	yn = ym;
 | 
			
		||||
	ensign = emsign;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  
 | 
			
		||||
    while(yn >= ym) {		// March until error becomes smaller.
 | 
			
		||||
      if (++steps > 10)
 | 
			
		||||
      	break;
 | 
			
		||||
      
 | 
			
		||||
      ym = yn;
 | 
			
		||||
      xm = xn;
 | 
			
		||||
      emsign = ensign;
 | 
			
		||||
      a = xm + q;
 | 
			
		||||
      if (a == xm || a <= xx0 || a >= xx1)
 | 
			
		||||
	break;// Must not skip over the zeros either side.      
 | 
			
		||||
 | 
			
		||||
      xn = a;
 | 
			
		||||
      yn = getErr(xn,&ensign);
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    mm[i] = xm;			// Position of maximum
 | 
			
		||||
    yy[i] = ym;			// Value of maximum
 | 
			
		||||
 | 
			
		||||
    if (eclose > ym) eclose = ym;
 | 
			
		||||
    if (farther < ym) farther = ym;
 | 
			
		||||
 | 
			
		||||
    xx0 = xx1; // Walk to next zero.
 | 
			
		||||
  } // end of search loop
 | 
			
		||||
 | 
			
		||||
  q = (farther - eclose);	// Decrease step size if error spread increased
 | 
			
		||||
 | 
			
		||||
  if (eclose != 0.0) q /= eclose; // Relative error spread
 | 
			
		||||
 | 
			
		||||
  if (q >= spread)
 | 
			
		||||
    delta *= 0.5; // Spread is increasing; decrease step size
 | 
			
		||||
  
 | 
			
		||||
  spread = q;
 | 
			
		||||
 | 
			
		||||
  for (int i = 0; i < neq; i++) {
 | 
			
		||||
    q = yy[i+1];
 | 
			
		||||
    if (q != 0.0) q = yy[i] / q  - (bigfloat)1l;
 | 
			
		||||
    else q = 0.0625;
 | 
			
		||||
    if (q > (bigfloat)0.25) q = 0.25;
 | 
			
		||||
    q *= mm[i+1] - mm[i];
 | 
			
		||||
    step[i] = q * delta;
 | 
			
		||||
  }
 | 
			
		||||
  step[neq] = step[neq-1];
 | 
			
		||||
  
 | 
			
		||||
  for (int i = 0; i < neq; i++) {	// Insert new locations for the zeros.
 | 
			
		||||
    xm = xx[i] - step[i];
 | 
			
		||||
 | 
			
		||||
    if (xm <= apstrt)
 | 
			
		||||
      continue;
 | 
			
		||||
 | 
			
		||||
    if (xm >= apend)
 | 
			
		||||
      continue;
 | 
			
		||||
 | 
			
		||||
    if (xm <= mm[i])
 | 
			
		||||
      xm = (bigfloat)0.5 * (mm[i] + xx[i]);    
 | 
			
		||||
 | 
			
		||||
    if (xm >= mm[i+1])
 | 
			
		||||
      xm = (bigfloat)0.5 * (mm[i+1] + xx[i]);
 | 
			
		||||
    
 | 
			
		||||
    xx[i] = xm;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Solve the equations
 | 
			
		||||
void AlgRemezGeneral::equations(){
 | 
			
		||||
  bigfloat x, y, z;
 | 
			
		||||
  bigfloat *aa;
 | 
			
		||||
  
 | 
			
		||||
  for (int i = 0; i < neq; i++) {	// set up the equations for solution by simq()
 | 
			
		||||
    int ip = neq * i;		// offset to 1st element of this row of matrix
 | 
			
		||||
    x = xx[i];			// the guess for this row
 | 
			
		||||
    y = func(x);		// right-hand-side vector
 | 
			
		||||
 | 
			
		||||
    z = (bigfloat)1l;
 | 
			
		||||
    aa = A.data()+ip;
 | 
			
		||||
    int t = 0;
 | 
			
		||||
    for (int j = 0; j <= pow_n; j++) {
 | 
			
		||||
      if(num_pows[j] != -1){ *aa++ = z; t++; }
 | 
			
		||||
      z *= x;
 | 
			
		||||
    }
 | 
			
		||||
    assert(t == n+1);
 | 
			
		||||
 | 
			
		||||
    z = (bigfloat)1l;
 | 
			
		||||
    t = 0;
 | 
			
		||||
    for (int j = 0; j < pow_d; j++) {
 | 
			
		||||
      if(den_pows[j] != -1){ *aa++ = -y * z; t++; }
 | 
			
		||||
      z *= x;
 | 
			
		||||
    }
 | 
			
		||||
    assert(t == d);
 | 
			
		||||
 | 
			
		||||
    B[i] = y * z;		// Right hand side vector
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Solve the simultaneous linear equations.
 | 
			
		||||
  if (simq()){
 | 
			
		||||
    std::cout<<"simq failed\n";
 | 
			
		||||
    exit(0);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
// Evaluate the rational form P(x)/Q(x) using coefficients
 | 
			
		||||
// from the solution vector param
 | 
			
		||||
bigfloat AlgRemezGeneral::approx(const bigfloat x) const{
 | 
			
		||||
  // Work backwards toward the constant term.
 | 
			
		||||
  int c = n;
 | 
			
		||||
  bigfloat yn = param[c--];		// Highest order numerator coefficient
 | 
			
		||||
  for (int i = pow_n-1; i >= 0; i--) yn = x * yn  +  (num_pows[i] != -1 ? param[c--] : bigfloat(0l));  
 | 
			
		||||
 | 
			
		||||
  c = n+d;
 | 
			
		||||
  bigfloat yd = 1l; //Highest degree coefficient is 1.0
 | 
			
		||||
  for (int i = pow_d-1; i >= 0; i--) yd = x * yd  +  (den_pows[i] != -1 ? param[c--] : bigfloat(0l)); 
 | 
			
		||||
 | 
			
		||||
  return(yn/yd);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Compute size and sign of the approximation error at x
 | 
			
		||||
bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{
 | 
			
		||||
  bigfloat f = func(x);
 | 
			
		||||
  bigfloat e = approx(x) - f;
 | 
			
		||||
  if (f != 0) e /= f;
 | 
			
		||||
  if (e < (bigfloat)0.0) {
 | 
			
		||||
    *sign = -1;
 | 
			
		||||
    e = -e;
 | 
			
		||||
  }
 | 
			
		||||
  else *sign = 1;
 | 
			
		||||
  
 | 
			
		||||
  return(e);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Solve the system AX=B
 | 
			
		||||
int AlgRemezGeneral::simq(){
 | 
			
		||||
 | 
			
		||||
  int ip, ipj, ipk, ipn;
 | 
			
		||||
  int idxpiv;
 | 
			
		||||
  int kp, kp1, kpk, kpn;
 | 
			
		||||
  int nip, nkp;
 | 
			
		||||
  bigfloat em, q, rownrm, big, size, pivot, sum;
 | 
			
		||||
  bigfloat *aa;
 | 
			
		||||
  bigfloat *X = param.data();
 | 
			
		||||
 | 
			
		||||
  int n = neq;
 | 
			
		||||
  int nm1 = n - 1;
 | 
			
		||||
  // Initialize IPS and X
 | 
			
		||||
  
 | 
			
		||||
  int ij = 0;
 | 
			
		||||
  for (int i = 0; i < n; i++) {
 | 
			
		||||
    IPS[i] = i;
 | 
			
		||||
    rownrm = 0.0;
 | 
			
		||||
    for(int j = 0; j < n; j++) {
 | 
			
		||||
      q = abs_bf(A[ij]);
 | 
			
		||||
      if(rownrm < q) rownrm = q;
 | 
			
		||||
      ++ij;
 | 
			
		||||
    }
 | 
			
		||||
    if (rownrm == (bigfloat)0l) {
 | 
			
		||||
      std::cout<<"simq rownrm=0\n";
 | 
			
		||||
      return(1);
 | 
			
		||||
    }
 | 
			
		||||
    X[i] = (bigfloat)1.0 / rownrm;
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  for (int k = 0; k < nm1; k++) {
 | 
			
		||||
    big = 0.0;
 | 
			
		||||
    idxpiv = 0;
 | 
			
		||||
    
 | 
			
		||||
    for (int i = k; i < n; i++) {
 | 
			
		||||
      ip = IPS[i];
 | 
			
		||||
      ipk = n*ip + k;
 | 
			
		||||
      size = abs_bf(A[ipk]) * X[ip];
 | 
			
		||||
      if (size > big) {
 | 
			
		||||
	big = size;
 | 
			
		||||
	idxpiv = i;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
    
 | 
			
		||||
    if (big == (bigfloat)0l) {
 | 
			
		||||
      std::cout<<"simq big=0\n";
 | 
			
		||||
      return(2);
 | 
			
		||||
    }
 | 
			
		||||
    if (idxpiv != k) {
 | 
			
		||||
      int j = IPS[k];
 | 
			
		||||
      IPS[k] = IPS[idxpiv];
 | 
			
		||||
      IPS[idxpiv] = j;
 | 
			
		||||
    }
 | 
			
		||||
    kp = IPS[k];
 | 
			
		||||
    kpk = n*kp + k;
 | 
			
		||||
    pivot = A[kpk];
 | 
			
		||||
    kp1 = k+1;
 | 
			
		||||
    for (int i = kp1; i < n; i++) {
 | 
			
		||||
      ip = IPS[i];
 | 
			
		||||
      ipk = n*ip + k;
 | 
			
		||||
      em = -A[ipk] / pivot;
 | 
			
		||||
      A[ipk] = -em;
 | 
			
		||||
      nip = n*ip;
 | 
			
		||||
      nkp = n*kp;
 | 
			
		||||
      aa = A.data()+nkp+kp1;
 | 
			
		||||
      for (int j = kp1; j < n; j++) {
 | 
			
		||||
	ipj = nip + j;
 | 
			
		||||
	A[ipj] = A[ipj] + em * *aa++;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
  kpn = n * IPS[n-1] + n - 1;	// last element of IPS[n] th row
 | 
			
		||||
  if (A[kpn] == (bigfloat)0l) {
 | 
			
		||||
    std::cout<<"simq A[kpn]=0\n";
 | 
			
		||||
    return(3);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  
 | 
			
		||||
  ip = IPS[0];
 | 
			
		||||
  X[0] = B[ip];
 | 
			
		||||
  for (int i = 1; i < n; i++) {
 | 
			
		||||
    ip = IPS[i];
 | 
			
		||||
    ipj = n * ip;
 | 
			
		||||
    sum = 0.0;
 | 
			
		||||
    for (int j = 0; j < i; j++) {
 | 
			
		||||
      sum += A[ipj] * X[j];
 | 
			
		||||
      ++ipj;
 | 
			
		||||
    }
 | 
			
		||||
    X[i] = B[ip] - sum;
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  ipn = n * IPS[n-1] + n - 1;
 | 
			
		||||
  X[n-1] = X[n-1] / A[ipn];
 | 
			
		||||
  
 | 
			
		||||
  for (int iback = 1; iback < n; iback++) {
 | 
			
		||||
    //i goes (n-1),...,1
 | 
			
		||||
    int i = nm1 - iback;
 | 
			
		||||
    ip = IPS[i];
 | 
			
		||||
    nip = n*ip;
 | 
			
		||||
    sum = 0.0;
 | 
			
		||||
    aa = A.data()+nip+i+1;
 | 
			
		||||
    for (int j= i + 1; j < n; j++) 
 | 
			
		||||
      sum += *aa++ * X[j];
 | 
			
		||||
    X[i] = (X[i] - sum) / A[nip+i];
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  return(0);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void AlgRemezGeneral::csv(std::ostream & os) const{
 | 
			
		||||
  os << "Numerator" << std::endl;
 | 
			
		||||
  for(int i=0;i<=pow_n;i++){
 | 
			
		||||
    os << getCoeffNum(i) << "*x^" << i;
 | 
			
		||||
    if(i!=pow_n) os << " + ";
 | 
			
		||||
  }
 | 
			
		||||
  os << std::endl;
 | 
			
		||||
 | 
			
		||||
  os << "Denominator" << std::endl;
 | 
			
		||||
  for(int i=0;i<=pow_d;i++){
 | 
			
		||||
    os << getCoeffDen(i) << "*x^" << i;
 | 
			
		||||
    if(i!=pow_d) os << " + ";
 | 
			
		||||
  }
 | 
			
		||||
  os << std::endl;
 | 
			
		||||
 | 
			
		||||
  //For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc
 | 
			
		||||
  int sign;
 | 
			
		||||
  os << "Errors at maxima: coordinate, error, (sign)" << std::endl;
 | 
			
		||||
  for(int i=0;i<neq+1;i++){ 
 | 
			
		||||
    os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  os << "Scan over range:" << std::endl;
 | 
			
		||||
  int npt = 60;
 | 
			
		||||
  bigfloat dlt = (apend - apstrt)/bigfloat(npt-1);
 | 
			
		||||
 | 
			
		||||
  for (bigfloat x=apstrt; x<=apend; x = x + dlt) {
 | 
			
		||||
    double f = evaluateFunc(x);
 | 
			
		||||
    double r = evaluateApprox(x);
 | 
			
		||||
    os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl;
 | 
			
		||||
  }
 | 
			
		||||
  return;
 | 
			
		||||
}
 | 
			
		||||
							
								
								
									
										170
									
								
								Grid/algorithms/approx/RemezGeneral.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										170
									
								
								Grid/algorithms/approx/RemezGeneral.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,170 @@
 | 
			
		||||
/*
 | 
			
		||||
  C.Kelly Jan 2020 based on implementation by M. Clark May 2005
 | 
			
		||||
 | 
			
		||||
  AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial 
 | 
			
		||||
  It includes optional restriction to odd/even polynomials for the numerator and/or denominator
 | 
			
		||||
*/
 | 
			
		||||
 | 
			
		||||
#ifndef INCLUDED_ALG_REMEZ_GENERAL_H
 | 
			
		||||
#define INCLUDED_ALG_REMEZ_GENERAL_H
 | 
			
		||||
 | 
			
		||||
#include <stddef.h>
 | 
			
		||||
#include <Grid/GridStd.h>
 | 
			
		||||
 | 
			
		||||
#ifdef HAVE_LIBGMP
 | 
			
		||||
#include "bigfloat.h"
 | 
			
		||||
#else
 | 
			
		||||
#include "bigfloat_double.h"
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
class AlgRemezGeneral{
 | 
			
		||||
 public:
 | 
			
		||||
  enum PolyType { Even, Odd, Full };
 | 
			
		||||
 | 
			
		||||
 private:
 | 
			
		||||
 | 
			
		||||
  // In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer
 | 
			
		||||
  bigfloat (*f)(bigfloat x, void *data);
 | 
			
		||||
  void *data;
 | 
			
		||||
 | 
			
		||||
  // The approximation parameters
 | 
			
		||||
  std::vector<bigfloat> param;
 | 
			
		||||
  bigfloat norm;
 | 
			
		||||
 | 
			
		||||
  // The number of non-zero terms in the numerator and denominator
 | 
			
		||||
  int n, d;
 | 
			
		||||
  // The numerator and denominator degree (i.e.  the largest power)
 | 
			
		||||
  int pow_n, pow_d;
 | 
			
		||||
  
 | 
			
		||||
  // Specify if the numerator and/or denominator are odd/even polynomials
 | 
			
		||||
  PolyType num_type;
 | 
			
		||||
  PolyType den_type;
 | 
			
		||||
  std::vector<int> num_pows; //contains the mapping, with -1 if not present
 | 
			
		||||
  std::vector<int> den_pows;
 | 
			
		||||
 | 
			
		||||
  // The bounds of the approximation
 | 
			
		||||
  bigfloat apstrt, apwidt, apend;
 | 
			
		||||
 | 
			
		||||
  // Variables used to calculate the approximation
 | 
			
		||||
  int nd1, iter;
 | 
			
		||||
  std::vector<bigfloat> xx;
 | 
			
		||||
  std::vector<bigfloat> mm;
 | 
			
		||||
  std::vector<bigfloat> step;
 | 
			
		||||
 | 
			
		||||
  bigfloat delta, spread;
 | 
			
		||||
  
 | 
			
		||||
  // Variables used in search
 | 
			
		||||
  std::vector<bigfloat> yy;
 | 
			
		||||
 | 
			
		||||
  // Variables used in solving linear equations
 | 
			
		||||
  std::vector<bigfloat> A;
 | 
			
		||||
  std::vector<bigfloat> B;
 | 
			
		||||
  std::vector<int> IPS;
 | 
			
		||||
 | 
			
		||||
  // The number of equations we must solve at each iteration (n+d+1)
 | 
			
		||||
  int neq;
 | 
			
		||||
 | 
			
		||||
  // The precision of the GNU MP library
 | 
			
		||||
  long prec;
 | 
			
		||||
 | 
			
		||||
  // Initialize member variables associated with the polynomial's properties
 | 
			
		||||
  void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in);
 | 
			
		||||
 | 
			
		||||
  // Initial values of maximal and minmal errors
 | 
			
		||||
  void initialGuess();
 | 
			
		||||
 | 
			
		||||
  // Initialise step sizes
 | 
			
		||||
  void stpini();
 | 
			
		||||
 | 
			
		||||
  // Initialize the algorithm
 | 
			
		||||
  void reinitializeAlgorithm();
 | 
			
		||||
 | 
			
		||||
  // Solve the equations
 | 
			
		||||
  void equations();
 | 
			
		||||
 | 
			
		||||
  // Search for error maxima and minima
 | 
			
		||||
  void search(); 
 | 
			
		||||
 | 
			
		||||
  // Calculate function required for the approximation
 | 
			
		||||
  inline bigfloat func(bigfloat x) const{
 | 
			
		||||
    return f(x, data);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Compute size and sign of the approximation error at x
 | 
			
		||||
  bigfloat getErr(bigfloat x, int *sign) const;
 | 
			
		||||
 | 
			
		||||
  // Solve the system AX=B   where X = param
 | 
			
		||||
  int simq();
 | 
			
		||||
 | 
			
		||||
  // Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param
 | 
			
		||||
  bigfloat approx(bigfloat x) const;
 | 
			
		||||
 | 
			
		||||
 public:
 | 
			
		||||
  
 | 
			
		||||
  AlgRemezGeneral(double lower, double upper, long prec,
 | 
			
		||||
		  bigfloat (*f)(bigfloat x, void *data), void *data);
 | 
			
		||||
 | 
			
		||||
  inline int getDegree(void) const{ 
 | 
			
		||||
    assert(n==d);
 | 
			
		||||
    return n;
 | 
			
		||||
  }
 | 
			
		||||
  // Reset the bounds of the approximation
 | 
			
		||||
  inline void setBounds(double lower, double upper) {
 | 
			
		||||
    apstrt = lower;
 | 
			
		||||
    apend = upper;
 | 
			
		||||
    apwidt = apend - apstrt;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Get the bounds of the approximation
 | 
			
		||||
  inline void getBounds(double &lower, double &upper) const{ 
 | 
			
		||||
    lower=(double)apstrt;
 | 
			
		||||
    upper=(double)apend;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Run the algorithm to generate the rational approximation
 | 
			
		||||
  double generateApprox(int num_degree, int den_degree, 
 | 
			
		||||
			PolyType num_type, PolyType den_type,
 | 
			
		||||
			const double tolerance = 1e-15, const int report_freq = 1000);
 | 
			
		||||
  
 | 
			
		||||
  inline double generateApprox(int num_degree, int den_degree, 
 | 
			
		||||
			       const double tolerance = 1e-15, const int report_freq = 1000){
 | 
			
		||||
    return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq);
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  // Evaluate the rational form P(x)/Q(x) using coefficients from the
 | 
			
		||||
  // solution vector param
 | 
			
		||||
  inline double evaluateApprox(double x) const{
 | 
			
		||||
    return (double)approx((bigfloat)x);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param
 | 
			
		||||
  inline double evaluateInverseApprox(double x) const{
 | 
			
		||||
    return 1.0/(double)approx((bigfloat)x);
 | 
			
		||||
  }  
 | 
			
		||||
 | 
			
		||||
  // Calculate function required for the approximation
 | 
			
		||||
  inline double evaluateFunc(double x) const{
 | 
			
		||||
    return (double)func((bigfloat)x);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Calculate inverse function required for the approximation
 | 
			
		||||
  inline double evaluateInverseFunc(double x) const{
 | 
			
		||||
    return 1.0/(double)func((bigfloat)x);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Dump csv of function, approx and error
 | 
			
		||||
  void csv(std::ostream &os = std::cout) const;
 | 
			
		||||
 | 
			
		||||
  // Get the coefficient of the term x^i in the numerator
 | 
			
		||||
  inline double getCoeffNum(const int i) const{    
 | 
			
		||||
    return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]);
 | 
			
		||||
  }
 | 
			
		||||
  // Get the coefficient of the term x^i in the denominator
 | 
			
		||||
  inline double getCoeffDen(const int i) const{ 
 | 
			
		||||
    if(i == pow_d) return 1.0;
 | 
			
		||||
    else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]); 
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
							
								
								
									
										183
									
								
								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										183
									
								
								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,183 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/algorithms/approx/ZMobius.cc
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#include <Grid/algorithms/approx/ZMobius.h>
 | 
			
		||||
#include <Grid/algorithms/approx/RemezGeneral.h>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
NAMESPACE_BEGIN(Approx);
 | 
			
		||||
 | 
			
		||||
//Compute the tanh approximation
 | 
			
		||||
inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){
 | 
			
		||||
  int Ls = w.size();
 | 
			
		||||
 | 
			
		||||
  ComplexD fxp = 1., fmp = 1.;
 | 
			
		||||
  for(int i=0;i<Ls;i++){
 | 
			
		||||
    fxp = fxp * ( w[i] + x );
 | 
			
		||||
    fmp = fmp * ( w[i] - x );
 | 
			
		||||
  }
 | 
			
		||||
  return ((fxp - fmp)/(fxp + fmp)).real();
 | 
			
		||||
}
 | 
			
		||||
inline double epsilonMobius(const double x, const std::vector<RealD> &w){
 | 
			
		||||
  int Ls = w.size();
 | 
			
		||||
 | 
			
		||||
  double fxp = 1., fmp = 1.;
 | 
			
		||||
  for(int i=0;i<Ls;i++){
 | 
			
		||||
    fxp = fxp * ( w[i] + x );
 | 
			
		||||
    fmp = fmp * ( w[i] - x );
 | 
			
		||||
  }
 | 
			
		||||
  return (fxp - fmp)/(fxp + fmp);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
//Compute the tanh approximation in a form suitable for the Remez
 | 
			
		||||
bigfloat epsilonMobius(bigfloat x, void* data){
 | 
			
		||||
  const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data );
 | 
			
		||||
  bigfloat fxp(1.0);
 | 
			
		||||
  bigfloat fmp(1.0);
 | 
			
		||||
 | 
			
		||||
  for(int i=0;i<omega.size();i++){
 | 
			
		||||
    fxp = fxp * ( bigfloat(omega[i]) + x);
 | 
			
		||||
    fmp = fmp * ( bigfloat(omega[i]) - x);
 | 
			
		||||
  }
 | 
			
		||||
  return (fxp - fmp)/(fxp + fmp);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound
 | 
			
		||||
//Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters
 | 
			
		||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out,
 | 
			
		||||
			 const std::vector<RealD> &omega_in, const int Ls_in,
 | 
			
		||||
			 const RealD lambda_bound){
 | 
			
		||||
  assert(omega_in.size() == Ls_in);
 | 
			
		||||
  omega_out.resize(Ls_out);
 | 
			
		||||
 | 
			
		||||
  //Use the Remez algorithm to generate the appropriate rational polynomial
 | 
			
		||||
  //For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)  
 | 
			
		||||
  AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in); 
 | 
			
		||||
  remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100);
 | 
			
		||||
  remez.csv(std::cout);
 | 
			
		||||
 | 
			
		||||
  //The rational approximation has the form  [ f(x) - f(-x) ] / [ f(x) + f(-x) ]  where  f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x )
 | 
			
		||||
  //cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7  pg 102
 | 
			
		||||
  //omega_i are therefore the negative of the complex roots of f(x)
 | 
			
		||||
 | 
			
		||||
  //We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial
 | 
			
		||||
  // \rho(\lambda) = det( A - \lambda I )    where I is the unit matrix
 | 
			
		||||
  //The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n   is the companion matrix 
 | 
			
		||||
  // A = | 0    1   0    0 0 .... 0 |
 | 
			
		||||
  //     | 0    0   1    0 0 .... 0 |
 | 
			
		||||
  //     | :    :   :    : :      : |
 | 
			
		||||
  //     | 0    0   0    0 0      1
 | 
			
		||||
  //     | -a0 -a1 -a2  ...  ... -an|
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
  //Note the Remez defines the largest power to have unit coefficient
 | 
			
		||||
  std::vector<RealD> coeffs(Ls_out+1);
 | 
			
		||||
  for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers
 | 
			
		||||
  for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers
 | 
			
		||||
 | 
			
		||||
  std::vector<std::complex<RealD> > roots(Ls_out);
 | 
			
		||||
 | 
			
		||||
  //Form the companion matrix
 | 
			
		||||
  Eigen::MatrixXd compn(Ls_out,Ls_out);
 | 
			
		||||
  for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.;
 | 
			
		||||
  compn(Ls_out - 1, 0) = -coeffs[0];
 | 
			
		||||
  
 | 
			
		||||
  for(int j=1;j<Ls_out;j++){
 | 
			
		||||
    for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.;
 | 
			
		||||
    compn(Ls_out - 1, j) = -coeffs[j];
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  //Eigensolve
 | 
			
		||||
  Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false);
 | 
			
		||||
 | 
			
		||||
  const auto & ev = slv.eigenvalues();
 | 
			
		||||
  for(int i=0;i<Ls_out;i++)
 | 
			
		||||
    omega_out[i] = -ev(i);
 | 
			
		||||
 | 
			
		||||
  //Sort ascending (smallest at start of vector!)
 | 
			
		||||
  std::sort(omega_out.begin(), omega_out.end(), 
 | 
			
		||||
	    [&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); });
 | 
			
		||||
 | 
			
		||||
  //McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension
 | 
			
		||||
  std::vector<ComplexD> omega_tmp = omega_out;
 | 
			
		||||
  int s_low=0, s_high=Ls_out-1, ss=0;
 | 
			
		||||
  for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega
 | 
			
		||||
    int s_to;
 | 
			
		||||
    if(ss % 2 == 0){
 | 
			
		||||
      s_to = s_low++;
 | 
			
		||||
    }else{
 | 
			
		||||
      s_to = s_high--;
 | 
			
		||||
    }
 | 
			
		||||
    omega_out[s_to] = omega_tmp[s_from];
 | 
			
		||||
    ++ss;
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  std::cout << "Resulting omega_i:" << std::endl;  
 | 
			
		||||
  for(int i=0;i<Ls_out;i++)
 | 
			
		||||
    std::cout << omega_out[i] << std::endl;
 | 
			
		||||
 | 
			
		||||
  std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl;
 | 
			
		||||
  std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n";
 | 
			
		||||
  
 | 
			
		||||
  int npt = 60;
 | 
			
		||||
  double dlt = lambda_bound/double(npt-1);
 | 
			
		||||
 | 
			
		||||
  for (int i =0; i<npt; i++){
 | 
			
		||||
    double x = i*dlt;
 | 
			
		||||
    double r = remez.evaluateApprox(x);
 | 
			
		||||
    double p = epsilonMobius(x, omega_out);
 | 
			
		||||
    double e = epsilonMobius(x, omega_in);
 | 
			
		||||
 | 
			
		||||
    std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
  
 | 
			
		||||
//mobius_param = b+c   with b-c=1
 | 
			
		||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){
 | 
			
		||||
  std::vector<RealD> omega_in(Ls_in, 1./mobius_param);
 | 
			
		||||
  computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out
 | 
			
		||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, 
 | 
			
		||||
			 const RealD mobius_param_out, const int Ls_out, 
 | 
			
		||||
			 const RealD mobius_param_in, const int Ls_in,
 | 
			
		||||
			 const RealD lambda_bound){
 | 
			
		||||
  computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound);
 | 
			
		||||
  for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out;
 | 
			
		||||
}
 | 
			
		||||
//Assumes mobius_param_out == mobius_param_in
 | 
			
		||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){
 | 
			
		||||
  computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Approx);
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
							
								
								
									
										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,57 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/algorithms/approx/ZMobius.h
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#ifndef GRID_ZMOBIUS_APPROX_H
 | 
			
		||||
#define GRID_ZMOBIUS_APPROX_H
 | 
			
		||||
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
NAMESPACE_BEGIN(Approx);
 | 
			
		||||
 | 
			
		||||
//Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound
 | 
			
		||||
//Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters
 | 
			
		||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out,
 | 
			
		||||
			 const std::vector<RealD> &omega_in, const int Ls_in,
 | 
			
		||||
			 const RealD lambda_bound);
 | 
			
		||||
  
 | 
			
		||||
//mobius_param = b+c   with b-c=1
 | 
			
		||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound);
 | 
			
		||||
 | 
			
		||||
//ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out
 | 
			
		||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, 
 | 
			
		||||
			 const RealD mobius_param_out, const int Ls_out, 
 | 
			
		||||
			 const RealD mobius_param_in, const int Ls_in,
 | 
			
		||||
			 const RealD lambda_bound);
 | 
			
		||||
 | 
			
		||||
//Assumes mobius_param_out == mobius_param_in
 | 
			
		||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound);
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Approx);
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
@@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
    *************************************************************************************/
 | 
			
		||||
    /*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#ifndef INCLUDED_BIGFLOAT_DOUBLE_H
 | 
			
		||||
#define INCLUDED_BIGFLOAT_DOUBLE_H
 | 
			
		||||
 | 
			
		||||
#include <math.h>
 | 
			
		||||
 | 
			
		||||
typedef double mfloat; 
 | 
			
		||||
@@ -186,4 +190,6 @@ public:
 | 
			
		||||
  //  friend bigfloat& random(void);
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,234 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/algorithms/iterative/BiCGSTAB.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: juettner <juettner@soton.ac.uk>
 | 
			
		||||
Author: David Murphy <djmurphy@mit.edu>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_BICGSTAB_H
 | 
			
		||||
#define GRID_BICGSTAB_H
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
// Base classes for iterative processes based on operators
 | 
			
		||||
// single input vec, single output vec.
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
template <class Field>
 | 
			
		||||
class BiCGSTAB : public OperatorFunction<Field> 
 | 
			
		||||
{
 | 
			
		||||
  public:
 | 
			
		||||
    using OperatorFunction<Field>::operator();
 | 
			
		||||
    
 | 
			
		||||
    bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge.
 | 
			
		||||
                             // Defaults true.
 | 
			
		||||
    RealD Tolerance;
 | 
			
		||||
    Integer MaxIterations;
 | 
			
		||||
    Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | 
			
		||||
  
 | 
			
		||||
    BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) : 
 | 
			
		||||
      Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){};
 | 
			
		||||
 | 
			
		||||
    void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi) 
 | 
			
		||||
    {
 | 
			
		||||
      psi.Checkerboard() = src.Checkerboard();
 | 
			
		||||
      conformable(psi, src);
 | 
			
		||||
 | 
			
		||||
      RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1);
 | 
			
		||||
      RealD a(0), bo(0), b(0), ssq(0);
 | 
			
		||||
 | 
			
		||||
      Field p(src);
 | 
			
		||||
      Field r(src);
 | 
			
		||||
      Field rhat(src);
 | 
			
		||||
      Field v(src);
 | 
			
		||||
      Field s(src);
 | 
			
		||||
      Field t(src);
 | 
			
		||||
      Field h(src);
 | 
			
		||||
 | 
			
		||||
      v = Zero();
 | 
			
		||||
      p = Zero();
 | 
			
		||||
 | 
			
		||||
      // Initial residual computation & set up
 | 
			
		||||
      RealD guess = norm2(psi);
 | 
			
		||||
      assert(std::isnan(guess) == 0);
 | 
			
		||||
    
 | 
			
		||||
      Linop.Op(psi, v);
 | 
			
		||||
      b = norm2(v);
 | 
			
		||||
 | 
			
		||||
      r = src - v;
 | 
			
		||||
      rhat = r;
 | 
			
		||||
      a = norm2(r);
 | 
			
		||||
      ssq = norm2(src);
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl;
 | 
			
		||||
      std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:   src " << ssq << std::endl;
 | 
			
		||||
      std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:    mp " << b << std::endl;
 | 
			
		||||
      std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:     r " << a << std::endl;
 | 
			
		||||
 | 
			
		||||
      RealD rsq = Tolerance * Tolerance * ssq;
 | 
			
		||||
 | 
			
		||||
      // Check if guess is really REALLY good :)
 | 
			
		||||
      if(a <= rsq){ return; }
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl;
 | 
			
		||||
 | 
			
		||||
      GridStopWatch LinalgTimer;
 | 
			
		||||
      GridStopWatch InnerTimer;
 | 
			
		||||
      GridStopWatch AxpyNormTimer;
 | 
			
		||||
      GridStopWatch LinearCombTimer;
 | 
			
		||||
      GridStopWatch MatrixTimer;
 | 
			
		||||
      GridStopWatch SolverTimer;
 | 
			
		||||
 | 
			
		||||
      SolverTimer.Start();
 | 
			
		||||
      int k;
 | 
			
		||||
      for (k = 1; k <= MaxIterations; k++) 
 | 
			
		||||
      {
 | 
			
		||||
        rho_prev = rho;
 | 
			
		||||
 | 
			
		||||
        LinalgTimer.Start();
 | 
			
		||||
        InnerTimer.Start();
 | 
			
		||||
        ComplexD Crho  = innerProduct(rhat,r);
 | 
			
		||||
        InnerTimer.Stop();
 | 
			
		||||
        rho = Crho.real();
 | 
			
		||||
 | 
			
		||||
        beta = (rho / rho_prev) * (alpha / omega);
 | 
			
		||||
 | 
			
		||||
        LinearCombTimer.Start();
 | 
			
		||||
        bo = beta * omega;
 | 
			
		||||
	{
 | 
			
		||||
	  autoView( p_v , p, AcceleratorWrite);
 | 
			
		||||
	  autoView( r_v , r, AcceleratorRead);
 | 
			
		||||
	  autoView( v_v , v, AcceleratorRead);
 | 
			
		||||
	  accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	      coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss));
 | 
			
		||||
	    });
 | 
			
		||||
	}
 | 
			
		||||
        LinearCombTimer.Stop();
 | 
			
		||||
        LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
        MatrixTimer.Start();
 | 
			
		||||
        Linop.Op(p,v);
 | 
			
		||||
        MatrixTimer.Stop();
 | 
			
		||||
 | 
			
		||||
        LinalgTimer.Start();
 | 
			
		||||
        InnerTimer.Start();
 | 
			
		||||
        ComplexD Calpha = innerProduct(rhat,v);
 | 
			
		||||
        InnerTimer.Stop();
 | 
			
		||||
        alpha = rho / Calpha.real();
 | 
			
		||||
 | 
			
		||||
        LinearCombTimer.Start();
 | 
			
		||||
	{
 | 
			
		||||
	  autoView( p_v , p, AcceleratorRead);
 | 
			
		||||
	  autoView( r_v , r, AcceleratorRead);
 | 
			
		||||
	  autoView( v_v , v, AcceleratorRead);
 | 
			
		||||
	  autoView( psi_v,psi, AcceleratorRead);
 | 
			
		||||
	  autoView( h_v  ,  h, AcceleratorWrite);
 | 
			
		||||
	  autoView( s_v  ,  s, AcceleratorWrite);
 | 
			
		||||
	  accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	      coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss));
 | 
			
		||||
	    });
 | 
			
		||||
	  accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	      coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss));
 | 
			
		||||
 	  });
 | 
			
		||||
        }
 | 
			
		||||
        LinearCombTimer.Stop();
 | 
			
		||||
        LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
        MatrixTimer.Start();
 | 
			
		||||
        Linop.Op(s,t);
 | 
			
		||||
        MatrixTimer.Stop();
 | 
			
		||||
 | 
			
		||||
        LinalgTimer.Start();
 | 
			
		||||
        InnerTimer.Start();
 | 
			
		||||
        ComplexD Comega = innerProduct(t,s);
 | 
			
		||||
        InnerTimer.Stop();
 | 
			
		||||
        omega = Comega.real() / norm2(t);
 | 
			
		||||
 | 
			
		||||
        LinearCombTimer.Start();
 | 
			
		||||
	{
 | 
			
		||||
	  autoView( psi_v,psi, AcceleratorWrite);
 | 
			
		||||
	  autoView( r_v , r, AcceleratorWrite);
 | 
			
		||||
	  autoView( h_v , h, AcceleratorRead);
 | 
			
		||||
	  autoView( s_v , s, AcceleratorRead);
 | 
			
		||||
	  autoView( t_v , t, AcceleratorRead);
 | 
			
		||||
	  accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	      coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss));
 | 
			
		||||
	      coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss));
 | 
			
		||||
	    });
 | 
			
		||||
	}
 | 
			
		||||
        LinearCombTimer.Stop();
 | 
			
		||||
	
 | 
			
		||||
        cp = norm2(r);
 | 
			
		||||
        LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
        std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
 | 
			
		||||
 | 
			
		||||
        // Stopping condition
 | 
			
		||||
        if(cp <= rsq) 
 | 
			
		||||
        {
 | 
			
		||||
          SolverTimer.Stop();
 | 
			
		||||
          Linop.Op(psi, v);
 | 
			
		||||
          p = v - src;
 | 
			
		||||
 | 
			
		||||
          RealD srcnorm = sqrt(norm2(src));
 | 
			
		||||
          RealD resnorm = sqrt(norm2(p));
 | 
			
		||||
          RealD true_residual = resnorm / srcnorm;
 | 
			
		||||
 | 
			
		||||
          std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl;
 | 
			
		||||
 | 
			
		||||
          std::cout << GridLogMessage << "Time breakdown " << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() << std::endl;
 | 
			
		||||
          std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl;
 | 
			
		||||
 | 
			
		||||
          if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); }
 | 
			
		||||
 | 
			
		||||
          IterationsToComplete = k;	
 | 
			
		||||
 | 
			
		||||
          return;
 | 
			
		||||
        }
 | 
			
		||||
      }
 | 
			
		||||
      
 | 
			
		||||
      std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl;
 | 
			
		||||
 | 
			
		||||
      if(ErrorOnNoConverge){ assert(0); }
 | 
			
		||||
      IterationsToComplete = k;
 | 
			
		||||
    }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
							
								
								
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,158 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
 | 
			
		||||
Author: David Murphy <djmurphy@mit.edu>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_BICGSTAB_MIXED_PREC_H
 | 
			
		||||
#define GRID_BICGSTAB_MIXED_PREC_H
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
// Mixed precision restarted defect correction BiCGSTAB
 | 
			
		||||
template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0> 
 | 
			
		||||
class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD> 
 | 
			
		||||
{
 | 
			
		||||
  public:                                                
 | 
			
		||||
    RealD   Tolerance;
 | 
			
		||||
    RealD   InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed
 | 
			
		||||
    Integer MaxInnerIterations;
 | 
			
		||||
    Integer MaxOuterIterations;
 | 
			
		||||
    GridBase* SinglePrecGrid; // Grid for single-precision fields
 | 
			
		||||
    RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance
 | 
			
		||||
    LinearOperatorBase<FieldF> &Linop_f;
 | 
			
		||||
    LinearOperatorBase<FieldD> &Linop_d;
 | 
			
		||||
 | 
			
		||||
    Integer TotalInnerIterations; //Number of inner CG iterations
 | 
			
		||||
    Integer TotalOuterIterations; //Number of restarts
 | 
			
		||||
    Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step
 | 
			
		||||
 | 
			
		||||
    //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess
 | 
			
		||||
    LinearFunction<FieldF> *guesser;
 | 
			
		||||
    
 | 
			
		||||
    MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid, 
 | 
			
		||||
        LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) : 
 | 
			
		||||
      Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), 
 | 
			
		||||
      MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {};
 | 
			
		||||
 | 
			
		||||
    void useGuesser(LinearFunction<FieldF>& g){
 | 
			
		||||
      guesser = &g;
 | 
			
		||||
    }
 | 
			
		||||
  
 | 
			
		||||
    void operator() (const FieldD& src_d_in, FieldD& sol_d)
 | 
			
		||||
    {
 | 
			
		||||
      TotalInnerIterations = 0;
 | 
			
		||||
    
 | 
			
		||||
      GridStopWatch TotalTimer;
 | 
			
		||||
      TotalTimer.Start();
 | 
			
		||||
      
 | 
			
		||||
      int cb = src_d_in.Checkerboard();
 | 
			
		||||
      sol_d.Checkerboard() = cb;
 | 
			
		||||
      
 | 
			
		||||
      RealD src_norm = norm2(src_d_in);
 | 
			
		||||
      RealD stop = src_norm * Tolerance*Tolerance;
 | 
			
		||||
 | 
			
		||||
      GridBase* DoublePrecGrid = src_d_in.Grid();
 | 
			
		||||
      FieldD tmp_d(DoublePrecGrid);
 | 
			
		||||
      tmp_d.Checkerboard() = cb;
 | 
			
		||||
      
 | 
			
		||||
      FieldD tmp2_d(DoublePrecGrid);
 | 
			
		||||
      tmp2_d.Checkerboard() = cb;
 | 
			
		||||
      
 | 
			
		||||
      FieldD src_d(DoublePrecGrid);
 | 
			
		||||
      src_d = src_d_in; //source for next inner iteration, computed from residual during operation
 | 
			
		||||
      
 | 
			
		||||
      RealD inner_tol = InnerTolerance;
 | 
			
		||||
      
 | 
			
		||||
      FieldF src_f(SinglePrecGrid);
 | 
			
		||||
      src_f.Checkerboard() = cb;
 | 
			
		||||
      
 | 
			
		||||
      FieldF sol_f(SinglePrecGrid);
 | 
			
		||||
      sol_f.Checkerboard() = cb;
 | 
			
		||||
      
 | 
			
		||||
      BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations);
 | 
			
		||||
      CG_f.ErrorOnNoConverge = false;
 | 
			
		||||
 | 
			
		||||
      GridStopWatch InnerCGtimer;
 | 
			
		||||
 | 
			
		||||
      GridStopWatch PrecChangeTimer;
 | 
			
		||||
      
 | 
			
		||||
      Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count
 | 
			
		||||
        
 | 
			
		||||
      for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++)
 | 
			
		||||
      {
 | 
			
		||||
        // Compute double precision rsd and also new RHS vector.
 | 
			
		||||
        Linop_d.Op(sol_d, tmp_d);
 | 
			
		||||
        RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector
 | 
			
		||||
        
 | 
			
		||||
        std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl;
 | 
			
		||||
 | 
			
		||||
        if(norm < OuterLoopNormMult * stop){
 | 
			
		||||
          std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl;
 | 
			
		||||
          break;
 | 
			
		||||
        }
 | 
			
		||||
        while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ??
 | 
			
		||||
 | 
			
		||||
        PrecChangeTimer.Start();
 | 
			
		||||
        precisionChange(src_f, src_d);
 | 
			
		||||
        PrecChangeTimer.Stop();
 | 
			
		||||
        
 | 
			
		||||
        sol_f = Zero();
 | 
			
		||||
 | 
			
		||||
        //Optionally improve inner solver guess (eg using known eigenvectors)
 | 
			
		||||
        if(guesser != NULL){ (*guesser)(src_f, sol_f); }
 | 
			
		||||
 | 
			
		||||
        //Inner CG
 | 
			
		||||
        CG_f.Tolerance = inner_tol;
 | 
			
		||||
        InnerCGtimer.Start();
 | 
			
		||||
        CG_f(Linop_f, src_f, sol_f);
 | 
			
		||||
        InnerCGtimer.Stop();
 | 
			
		||||
        TotalInnerIterations += CG_f.IterationsToComplete;
 | 
			
		||||
        
 | 
			
		||||
        //Convert sol back to double and add to double prec solution
 | 
			
		||||
        PrecChangeTimer.Start();
 | 
			
		||||
        precisionChange(tmp_d, sol_f);
 | 
			
		||||
        PrecChangeTimer.Stop();
 | 
			
		||||
        
 | 
			
		||||
        axpy(sol_d, 1.0, tmp_d, sol_d);
 | 
			
		||||
      }
 | 
			
		||||
      
 | 
			
		||||
      //Final trial CG
 | 
			
		||||
      std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl;
 | 
			
		||||
      
 | 
			
		||||
      BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations);
 | 
			
		||||
      CG_d(Linop_d, src_d_in, sol_d);
 | 
			
		||||
      TotalFinalStepIterations = CG_d.IterationsToComplete;
 | 
			
		||||
 | 
			
		||||
      TotalTimer.Stop();
 | 
			
		||||
      std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl;
 | 
			
		||||
      std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
@@ -52,6 +52,7 @@ class BlockConjugateGradient : public OperatorFunction<Field> {
 | 
			
		||||
  Integer MaxIterations;
 | 
			
		||||
  Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | 
			
		||||
  Integer PrintInterval; //GridLogMessages or Iterative
 | 
			
		||||
  RealD TrueResidual;
 | 
			
		||||
  
 | 
			
		||||
  BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true)
 | 
			
		||||
    : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100)
 | 
			
		||||
@@ -306,7 +307,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X)
 | 
			
		||||
 | 
			
		||||
      Linop.HermOp(X, AD);
 | 
			
		||||
      AD = AD-B;
 | 
			
		||||
      std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl;
 | 
			
		||||
      TrueResidual = std::sqrt(norm2(AD)/norm2(B));
 | 
			
		||||
      std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl;
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
 | 
			
		||||
      std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl;
 | 
			
		||||
@@ -442,7 +444,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &
 | 
			
		||||
 | 
			
		||||
      Linop.HermOp(Psi, AP);
 | 
			
		||||
      AP = AP-Src;
 | 
			
		||||
      std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl;
 | 
			
		||||
      TrueResidual = std::sqrt(norm2(AP)/norm2(Src));
 | 
			
		||||
      std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl;
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
 | 
			
		||||
      std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl;
 | 
			
		||||
@@ -653,7 +656,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field
 | 
			
		||||
      if ( rr > max_resid ) max_resid = rr;
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< sqrt(rrsum/sssum) << " max "<< sqrt(max_resid) <<std::endl;
 | 
			
		||||
    std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl;
 | 
			
		||||
 | 
			
		||||
    if ( max_resid < Tolerance*Tolerance ) { 
 | 
			
		||||
 | 
			
		||||
@@ -668,7 +671,8 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field
 | 
			
		||||
 | 
			
		||||
      for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]);
 | 
			
		||||
      for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b];
 | 
			
		||||
      std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(normv(AD)/normv(B)) <<std::endl;
 | 
			
		||||
      TrueResidual = std::sqrt(normv(AD)/normv(B));
 | 
			
		||||
      std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl;
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
 | 
			
		||||
      std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl;
 | 
			
		||||
 
 | 
			
		||||
@@ -49,6 +49,7 @@ public:
 | 
			
		||||
  RealD Tolerance;
 | 
			
		||||
  Integer MaxIterations;
 | 
			
		||||
  Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | 
			
		||||
  RealD TrueResidual;
 | 
			
		||||
  
 | 
			
		||||
  ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true)
 | 
			
		||||
    : Tolerance(tol),
 | 
			
		||||
@@ -81,6 +82,14 @@ public:
 | 
			
		||||
    cp = a;
 | 
			
		||||
    ssq = norm2(src);
 | 
			
		||||
 | 
			
		||||
    // Handle trivial case of zero src
 | 
			
		||||
    if (ssq == 0.){
 | 
			
		||||
      psi = Zero();
 | 
			
		||||
      IterationsToComplete = 1;
 | 
			
		||||
      TrueResidual = 0.;
 | 
			
		||||
      return;
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl;
 | 
			
		||||
    std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl;
 | 
			
		||||
    std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl;
 | 
			
		||||
@@ -92,6 +101,7 @@ public:
 | 
			
		||||
 | 
			
		||||
    // Check if guess is really REALLY good :)
 | 
			
		||||
    if (cp <= rsq) {
 | 
			
		||||
      TrueResidual = std::sqrt(a/ssq);
 | 
			
		||||
      std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl;
 | 
			
		||||
      IterationsToComplete = 0;	
 | 
			
		||||
      return;
 | 
			
		||||
@@ -130,18 +140,20 @@ public:
 | 
			
		||||
      b = cp / c;
 | 
			
		||||
 | 
			
		||||
      LinearCombTimer.Start();
 | 
			
		||||
      auto psi_v = psi.View();
 | 
			
		||||
      auto p_v   = p.View();
 | 
			
		||||
      auto r_v   = r.View();
 | 
			
		||||
      accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	  coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss));
 | 
			
		||||
	  coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss));
 | 
			
		||||
      });
 | 
			
		||||
      {
 | 
			
		||||
	autoView( psi_v , psi, AcceleratorWrite);
 | 
			
		||||
	autoView( p_v   , p,   AcceleratorWrite);
 | 
			
		||||
	autoView( r_v   , r,   AcceleratorWrite);
 | 
			
		||||
	accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{
 | 
			
		||||
	    coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss));
 | 
			
		||||
	    coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss));
 | 
			
		||||
	});
 | 
			
		||||
      }
 | 
			
		||||
      LinearCombTimer.Stop();
 | 
			
		||||
      LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k
 | 
			
		||||
                << " residual^2 " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
 | 
			
		||||
                << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
 | 
			
		||||
 | 
			
		||||
      // Stopping condition
 | 
			
		||||
      if (cp <= rsq) {
 | 
			
		||||
@@ -169,10 +181,17 @@ public:
 | 
			
		||||
        if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0);
 | 
			
		||||
 | 
			
		||||
	IterationsToComplete = k;	
 | 
			
		||||
	TrueResidual = true_residual;
 | 
			
		||||
 | 
			
		||||
        return;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
    // Failed. Calculate true residual before giving up                                                         
 | 
			
		||||
    Linop.HermOpAndNorm(psi, mmp, d, qq);
 | 
			
		||||
    p = mmp - src;
 | 
			
		||||
 | 
			
		||||
    TrueResidual = sqrt(norm2(p)/ssq);
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl;
 | 
			
		||||
 | 
			
		||||
    if (ErrorOnNoConverge) assert(0);
 | 
			
		||||
 
 | 
			
		||||
@@ -46,15 +46,19 @@ public:
 | 
			
		||||
 | 
			
		||||
  RealD   Tolerance;
 | 
			
		||||
  Integer MaxIterations;
 | 
			
		||||
    Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | 
			
		||||
  Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | 
			
		||||
  std::vector<int> IterationsToCompleteShift;  // Iterations for this shift
 | 
			
		||||
  int verbose;
 | 
			
		||||
  MultiShiftFunction shifts;
 | 
			
		||||
  std::vector<RealD> TrueResidualShift;
 | 
			
		||||
 | 
			
		||||
  ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) : 
 | 
			
		||||
    MaxIterations(maxit),
 | 
			
		||||
    shifts(_shifts)
 | 
			
		||||
  { 
 | 
			
		||||
    verbose=1;
 | 
			
		||||
    IterationsToCompleteShift.resize(_shifts.order);
 | 
			
		||||
    TrueResidualShift.resize(_shifts.order);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi)
 | 
			
		||||
@@ -125,6 +129,17 @@ public:
 | 
			
		||||
    // Residuals "r" are src
 | 
			
		||||
    // First search direction "p" is also src
 | 
			
		||||
    cp = norm2(src);
 | 
			
		||||
 | 
			
		||||
    // Handle trivial case of zero src.
 | 
			
		||||
    if( cp == 0. ){
 | 
			
		||||
      for(int s=0;s<nshift;s++){
 | 
			
		||||
	psi[s] = Zero();
 | 
			
		||||
	IterationsToCompleteShift[s] = 1;
 | 
			
		||||
	TrueResidualShift[s] = 0.;
 | 
			
		||||
      }
 | 
			
		||||
      return;
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    for(int s=0;s<nshift;s++){
 | 
			
		||||
      rsq[s] = cp * mresidual[s] * mresidual[s];
 | 
			
		||||
      std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s
 | 
			
		||||
@@ -270,6 +285,7 @@ public:
 | 
			
		||||
      for(int s=0;s<nshift;s++){
 | 
			
		||||
      
 | 
			
		||||
	if ( (!converged[s]) ){
 | 
			
		||||
	  IterationsToCompleteShift[s] = k;
 | 
			
		||||
	
 | 
			
		||||
	  RealD css  = c * z[s][iz]* z[s][iz];
 | 
			
		||||
	
 | 
			
		||||
@@ -299,7 +315,8 @@ public:
 | 
			
		||||
	  axpy(r,-alpha[s],src,tmp);
 | 
			
		||||
	  RealD rn = norm2(r);
 | 
			
		||||
	  RealD cn = norm2(src);
 | 
			
		||||
	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<<std::sqrt(rn/cn)<<std::endl;
 | 
			
		||||
	  TrueResidualShift[s] = std::sqrt(rn/cn);
 | 
			
		||||
	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl;
 | 
			
		||||
	}
 | 
			
		||||
 | 
			
		||||
      std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
 | 
			
		||||
 
 | 
			
		||||
@@ -37,211 +37,6 @@ Author: Christoph Lehner <clehner@bnl.gov>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid); 
 | 
			
		||||
 | 
			
		||||
  ////////////////////////////////////////////////////////
 | 
			
		||||
  // Move following 100 LOC to lattice/Lattice_basis.h
 | 
			
		||||
  ////////////////////////////////////////////////////////
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k) 
 | 
			
		||||
{
 | 
			
		||||
  // If assume basis[j] are already orthonormal,
 | 
			
		||||
  // can take all inner products in parallel saving 2x bandwidth
 | 
			
		||||
  // Save 3x bandwidth on the second line of loop.
 | 
			
		||||
  // perhaps 2.5x speed up.
 | 
			
		||||
  // 2x overall in Multigrid Lanczos  
 | 
			
		||||
  for(int j=0; j<k; ++j){
 | 
			
		||||
    auto ip = innerProduct(basis[j],w);
 | 
			
		||||
    w = w - ip*basis[j];
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisRotate(std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j0, int j1, int k0,int k1,int Nm) 
 | 
			
		||||
{
 | 
			
		||||
  typedef decltype(basis[0].View()) View;
 | 
			
		||||
  auto tmp_v = basis[0].View();
 | 
			
		||||
  Vector<View> basis_v(basis.size(),tmp_v);
 | 
			
		||||
  typedef typename Field::vector_object vobj;
 | 
			
		||||
  GridBase* grid = basis[0].Grid();
 | 
			
		||||
 | 
			
		||||
  for(int k=0;k<basis.size();k++){
 | 
			
		||||
    basis_v[k] = basis[k].View();
 | 
			
		||||
  }
 | 
			
		||||
#if 0
 | 
			
		||||
  std::vector < vobj , commAllocator<vobj> > Bt(thread_max() * Nm); // Thread private
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
    vobj* B = Bt.data() + Nm * thread_num();
 | 
			
		||||
 | 
			
		||||
    thread_for_in_region(ss, grid->oSites(),{
 | 
			
		||||
      for(int j=j0; j<j1; ++j) B[j]=0.;
 | 
			
		||||
      
 | 
			
		||||
      for(int j=j0; j<j1; ++j){
 | 
			
		||||
	for(int k=k0; k<k1; ++k){
 | 
			
		||||
	  B[j] +=Qt(j,k) * basis_v[k][ss];
 | 
			
		||||
	}
 | 
			
		||||
      }
 | 
			
		||||
      for(int j=j0; j<j1; ++j){
 | 
			
		||||
	basis_v[j][ss] = B[j];
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
#else
 | 
			
		||||
 | 
			
		||||
  int nrot = j1-j0;
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
  uint64_t oSites   =grid->oSites();
 | 
			
		||||
  uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead
 | 
			
		||||
 | 
			
		||||
  //  printf("BasisRotate %d %d nrot %d siteBlock %d\n",j0,j1,nrot,siteBlock);
 | 
			
		||||
 | 
			
		||||
  Vector <vobj> Bt(siteBlock * nrot); 
 | 
			
		||||
  auto Bp=&Bt[0];
 | 
			
		||||
 | 
			
		||||
  // GPU readable copy of Eigen matrix
 | 
			
		||||
  Vector<double> Qt_jv(Nm*Nm);
 | 
			
		||||
  double *Qt_p = & Qt_jv[0];
 | 
			
		||||
  for(int k=0;k<Nm;++k){
 | 
			
		||||
    for(int j=0;j<Nm;++j){
 | 
			
		||||
      Qt_p[j*Nm+k]=Qt(j,k);
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Block the loop to keep storage footprint down
 | 
			
		||||
  vobj zz=Zero();
 | 
			
		||||
  for(uint64_t s=0;s<oSites;s+=siteBlock){
 | 
			
		||||
 | 
			
		||||
    // remaining work in this block
 | 
			
		||||
    int ssites=MIN(siteBlock,oSites-s);
 | 
			
		||||
 | 
			
		||||
    // zero out the accumulators
 | 
			
		||||
    accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{
 | 
			
		||||
	auto z=coalescedRead(zz);
 | 
			
		||||
	coalescedWrite(Bp[ss],z);
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
    accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
 | 
			
		||||
	
 | 
			
		||||
      int j =sj%nrot;
 | 
			
		||||
      int jj  =j0+j;
 | 
			
		||||
      int ss =sj/nrot;
 | 
			
		||||
      int sss=ss+s;
 | 
			
		||||
 | 
			
		||||
      for(int k=k0; k<k1; ++k){
 | 
			
		||||
	auto tmp = coalescedRead(Bp[ss*nrot+j]);
 | 
			
		||||
	coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss]));
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
    accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
 | 
			
		||||
      int j =sj%nrot;
 | 
			
		||||
      int jj  =j0+j;
 | 
			
		||||
      int ss =sj/nrot;
 | 
			
		||||
      int sss=ss+s;
 | 
			
		||||
      coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j]));
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
#endif
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Extract a single rotated vector
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm) 
 | 
			
		||||
{
 | 
			
		||||
  typedef decltype(basis[0].View()) View;
 | 
			
		||||
  typedef typename Field::vector_object vobj;
 | 
			
		||||
  GridBase* grid = basis[0].Grid();
 | 
			
		||||
 | 
			
		||||
  result.Checkerboard() = basis[0].Checkerboard();
 | 
			
		||||
  auto result_v=result.View();
 | 
			
		||||
  Vector<View> basis_v(basis.size(),result_v);
 | 
			
		||||
  for(int k=0;k<basis.size();k++){
 | 
			
		||||
    basis_v[k] = basis[k].View();
 | 
			
		||||
  }
 | 
			
		||||
  vobj zz=Zero();
 | 
			
		||||
  Vector<double> Qt_jv(Nm);
 | 
			
		||||
  double * Qt_j = & Qt_jv[0];
 | 
			
		||||
  for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k);
 | 
			
		||||
  accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{
 | 
			
		||||
    auto B=coalescedRead(zz);
 | 
			
		||||
    for(int k=k0; k<k1; ++k){
 | 
			
		||||
      B +=Qt_j[k] * coalescedRead(basis_v[k][ss]);
 | 
			
		||||
    }
 | 
			
		||||
    coalescedWrite(result_v[ss], B);
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx) 
 | 
			
		||||
{
 | 
			
		||||
  int vlen = idx.size();
 | 
			
		||||
 | 
			
		||||
  assert(vlen>=1);
 | 
			
		||||
  assert(vlen<=sort_vals.size());
 | 
			
		||||
  assert(vlen<=_v.size());
 | 
			
		||||
 | 
			
		||||
  for (size_t i=0;i<vlen;i++) {
 | 
			
		||||
 | 
			
		||||
    if (idx[i] != i) {
 | 
			
		||||
 | 
			
		||||
      //////////////////////////////////////
 | 
			
		||||
      // idx[i] is a table of desired sources giving a permutation.
 | 
			
		||||
      // Swap v[i] with v[idx[i]].
 | 
			
		||||
      // Find  j>i for which _vnew[j] = _vold[i],
 | 
			
		||||
      // track the move idx[j] => idx[i]
 | 
			
		||||
      // track the move idx[i] => i
 | 
			
		||||
      //////////////////////////////////////
 | 
			
		||||
      size_t j;
 | 
			
		||||
      for (j=i;j<idx.size();j++)
 | 
			
		||||
	if (idx[j]==i)
 | 
			
		||||
	  break;
 | 
			
		||||
 | 
			
		||||
      assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i);
 | 
			
		||||
 | 
			
		||||
      swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy
 | 
			
		||||
      std::swap(sort_vals[i],sort_vals[idx[i]]);
 | 
			
		||||
 | 
			
		||||
      idx[j] = idx[i];
 | 
			
		||||
      idx[i] = i;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals) 
 | 
			
		||||
{
 | 
			
		||||
  std::vector<int> idx(sort_vals.size());
 | 
			
		||||
  std::iota(idx.begin(), idx.end(), 0);
 | 
			
		||||
 | 
			
		||||
  // sort indexes based on comparing values in v
 | 
			
		||||
  std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) {
 | 
			
		||||
    return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]);
 | 
			
		||||
  });
 | 
			
		||||
  return idx;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse) 
 | 
			
		||||
{
 | 
			
		||||
  std::vector<int> idx = basisSortGetIndex(sort_vals);
 | 
			
		||||
  if (reverse)
 | 
			
		||||
    std::reverse(idx.begin(), idx.end());
 | 
			
		||||
  
 | 
			
		||||
  basisReorderInPlace(_v,sort_vals,idx);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// PAB: faster to compute the inner products first then fuse loops.
 | 
			
		||||
// If performance critical can improve.
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) {
 | 
			
		||||
  result = Zero();
 | 
			
		||||
  assert(_v.size()==eval.size());
 | 
			
		||||
  int N = (int)_v.size();
 | 
			
		||||
  for (int i=0;i<N;i++) {
 | 
			
		||||
    Field& tmp = _v[i];
 | 
			
		||||
    axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
// Implicitly restarted lanczos
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
 
 | 
			
		||||
@@ -0,0 +1,241 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#ifndef GRID_PREC_GCR_NON_HERM_H
 | 
			
		||||
#define GRID_PREC_GCR_NON_HERM_H
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
//VPGCR Abe and Zhang, 2005.
 | 
			
		||||
//INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING
 | 
			
		||||
//Computing and Information Volume 2, Number 2, Pages 147-161
 | 
			
		||||
//NB. Likely not original reference since they are focussing on a preconditioner variant.
 | 
			
		||||
//    but VPGCR was nicely written up in their paper
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
#define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" " 
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> {
 | 
			
		||||
public:                                                
 | 
			
		||||
 | 
			
		||||
  RealD   Tolerance;
 | 
			
		||||
  Integer MaxIterations;
 | 
			
		||||
  int verbose;
 | 
			
		||||
  int mmax;
 | 
			
		||||
  int nstep;
 | 
			
		||||
  int steps;
 | 
			
		||||
  int level;
 | 
			
		||||
  GridStopWatch PrecTimer;
 | 
			
		||||
  GridStopWatch MatTimer;
 | 
			
		||||
  GridStopWatch LinalgTimer;
 | 
			
		||||
 | 
			
		||||
  LinearFunction<Field>     &Preconditioner;
 | 
			
		||||
  LinearOperatorBase<Field> &Linop;
 | 
			
		||||
 | 
			
		||||
  void Level(int lv) { level=lv; };
 | 
			
		||||
 | 
			
		||||
  PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) : 
 | 
			
		||||
    Tolerance(tol), 
 | 
			
		||||
    MaxIterations(maxit),
 | 
			
		||||
    Linop(_Linop),
 | 
			
		||||
    Preconditioner(Prec),
 | 
			
		||||
    mmax(_mmax),
 | 
			
		||||
    nstep(_nstep)
 | 
			
		||||
  { 
 | 
			
		||||
    level=1;
 | 
			
		||||
    verbose=1;
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
  void operator() (const Field &src, Field &psi){
 | 
			
		||||
 | 
			
		||||
    psi=Zero();
 | 
			
		||||
    RealD cp, ssq,rsq;
 | 
			
		||||
    ssq=norm2(src);
 | 
			
		||||
    rsq=Tolerance*Tolerance*ssq;
 | 
			
		||||
      
 | 
			
		||||
    Field r(src.Grid());
 | 
			
		||||
 | 
			
		||||
    PrecTimer.Reset();
 | 
			
		||||
    MatTimer.Reset();
 | 
			
		||||
    LinalgTimer.Reset();
 | 
			
		||||
 | 
			
		||||
    GridStopWatch SolverTimer;
 | 
			
		||||
    SolverTimer.Start();
 | 
			
		||||
 | 
			
		||||
    steps=0;
 | 
			
		||||
    for(int k=0;k<MaxIterations;k++){
 | 
			
		||||
 | 
			
		||||
      cp=GCRnStep(src,psi,rsq);
 | 
			
		||||
 | 
			
		||||
      GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl;
 | 
			
		||||
 | 
			
		||||
      if(cp<rsq) {
 | 
			
		||||
 | 
			
		||||
	SolverTimer.Stop();
 | 
			
		||||
 | 
			
		||||
	Linop.Op(psi,r);
 | 
			
		||||
	axpy(r,-1.0,src,r);
 | 
			
		||||
	RealD tr = norm2(r);
 | 
			
		||||
	GCRLogLevel<<"PGCR: Converged on iteration " <<steps
 | 
			
		||||
		 << " computed residual "<<sqrt(cp/ssq)
 | 
			
		||||
		 << " true residual "    <<sqrt(tr/ssq)
 | 
			
		||||
		 << " target "           <<Tolerance <<std::endl;
 | 
			
		||||
 | 
			
		||||
	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl;
 | 
			
		||||
	return;
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
    }
 | 
			
		||||
    GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl;
 | 
			
		||||
    //    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  RealD GCRnStep(const Field &src, Field &psi,RealD rsq){
 | 
			
		||||
 | 
			
		||||
    RealD cp;
 | 
			
		||||
    ComplexD a, b, zAz;
 | 
			
		||||
    RealD zAAz;
 | 
			
		||||
    ComplexD rq;
 | 
			
		||||
 | 
			
		||||
    GridBase *grid = src.Grid();
 | 
			
		||||
 | 
			
		||||
    Field r(grid);
 | 
			
		||||
    Field z(grid);
 | 
			
		||||
    Field tmp(grid);
 | 
			
		||||
    Field ttmp(grid);
 | 
			
		||||
    Field Az(grid);
 | 
			
		||||
 | 
			
		||||
    ////////////////////////////////
 | 
			
		||||
    // history for flexible orthog
 | 
			
		||||
    ////////////////////////////////
 | 
			
		||||
    std::vector<Field> q(mmax,grid);
 | 
			
		||||
    std::vector<Field> p(mmax,grid);
 | 
			
		||||
    std::vector<RealD> qq(mmax);
 | 
			
		||||
      
 | 
			
		||||
    GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl;
 | 
			
		||||
 | 
			
		||||
    //////////////////////////////////
 | 
			
		||||
    // initial guess x0 is taken as nonzero.
 | 
			
		||||
    // r0=src-A x0 = src
 | 
			
		||||
    //////////////////////////////////
 | 
			
		||||
    MatTimer.Start();
 | 
			
		||||
    Linop.Op(psi,Az);
 | 
			
		||||
    zAz = innerProduct(Az,psi);
 | 
			
		||||
    zAAz= norm2(Az);
 | 
			
		||||
    MatTimer.Stop();
 | 
			
		||||
    
 | 
			
		||||
 | 
			
		||||
    LinalgTimer.Start();
 | 
			
		||||
    r=src-Az;
 | 
			
		||||
    LinalgTimer.Stop();
 | 
			
		||||
    GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl;
 | 
			
		||||
    
 | 
			
		||||
    /////////////////////
 | 
			
		||||
    // p = Prec(r)
 | 
			
		||||
    /////////////////////
 | 
			
		||||
 | 
			
		||||
    PrecTimer.Start();
 | 
			
		||||
    Preconditioner(r,z);
 | 
			
		||||
    PrecTimer.Stop();
 | 
			
		||||
 | 
			
		||||
    MatTimer.Start();
 | 
			
		||||
    Linop.Op(z,Az);
 | 
			
		||||
    MatTimer.Stop();
 | 
			
		||||
 | 
			
		||||
    LinalgTimer.Start();
 | 
			
		||||
 | 
			
		||||
    zAz = innerProduct(Az,psi);
 | 
			
		||||
    zAAz= norm2(Az);
 | 
			
		||||
 | 
			
		||||
    //p[0],q[0],qq[0] 
 | 
			
		||||
    p[0]= z;
 | 
			
		||||
    q[0]= Az;
 | 
			
		||||
    qq[0]= zAAz;
 | 
			
		||||
    
 | 
			
		||||
    cp =norm2(r);
 | 
			
		||||
    LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
    for(int k=0;k<nstep;k++){
 | 
			
		||||
 | 
			
		||||
      steps++;
 | 
			
		||||
 | 
			
		||||
      int kp     = k+1;
 | 
			
		||||
      int peri_k = k %mmax;
 | 
			
		||||
      int peri_kp= kp%mmax;
 | 
			
		||||
 | 
			
		||||
      LinalgTimer.Start();
 | 
			
		||||
      rq= innerProduct(q[peri_k],r); // what if rAr not real?
 | 
			
		||||
      a = rq/qq[peri_k];
 | 
			
		||||
 | 
			
		||||
      axpy(psi,a,p[peri_k],psi);         
 | 
			
		||||
 | 
			
		||||
      cp = axpy_norm(r,-a,q[peri_k],r);
 | 
			
		||||
      LinalgTimer.Stop();
 | 
			
		||||
 | 
			
		||||
      GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl; 
 | 
			
		||||
 | 
			
		||||
      if((k==nstep-1)||(cp<rsq)){
 | 
			
		||||
	return cp;
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
      PrecTimer.Start();
 | 
			
		||||
      Preconditioner(r,z);// solve Az = r
 | 
			
		||||
      PrecTimer.Stop();
 | 
			
		||||
 | 
			
		||||
      MatTimer.Start();
 | 
			
		||||
      Linop.Op(z,Az);
 | 
			
		||||
      MatTimer.Stop();
 | 
			
		||||
      zAz = innerProduct(Az,psi);
 | 
			
		||||
      zAAz= norm2(Az);
 | 
			
		||||
 | 
			
		||||
      LinalgTimer.Start();
 | 
			
		||||
 | 
			
		||||
      q[peri_kp]=Az;
 | 
			
		||||
      p[peri_kp]=z;
 | 
			
		||||
 | 
			
		||||
      int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history.
 | 
			
		||||
      for(int back=0;back<northog;back++){
 | 
			
		||||
 | 
			
		||||
	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0);
 | 
			
		||||
 | 
			
		||||
	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back];
 | 
			
		||||
	p[peri_kp]=p[peri_kp]+b*p[peri_back];
 | 
			
		||||
	q[peri_kp]=q[peri_kp]+b*q[peri_back];
 | 
			
		||||
 | 
			
		||||
      }
 | 
			
		||||
      qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm
 | 
			
		||||
      LinalgTimer.Stop();
 | 
			
		||||
    }
 | 
			
		||||
    assert(0); // never reached
 | 
			
		||||
    return cp;
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
#endif
 | 
			
		||||
@@ -405,6 +405,70 @@ namespace Grid {
 | 
			
		||||
    }
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
  template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field> 
 | 
			
		||||
  {
 | 
			
		||||
    public:
 | 
			
		||||
      typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
 | 
			
		||||
 | 
			
		||||
      NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false,
 | 
			
		||||
          const bool _solnAsInitGuess = false)  
 | 
			
		||||
      : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {};
 | 
			
		||||
 | 
			
		||||
      //////////////////////////////////////////////////////
 | 
			
		||||
      // Override RedBlack specialisation
 | 
			
		||||
      //////////////////////////////////////////////////////
 | 
			
		||||
      virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o)
 | 
			
		||||
      {
 | 
			
		||||
        GridBase* grid  = _Matrix.RedBlackGrid();
 | 
			
		||||
        GridBase* fgrid = _Matrix.Grid();
 | 
			
		||||
 | 
			
		||||
        Field  tmp(grid);
 | 
			
		||||
        Field Mtmp(grid);
 | 
			
		||||
 | 
			
		||||
        pickCheckerboard(Even, src_e, src);
 | 
			
		||||
        pickCheckerboard(Odd , src_o, src);
 | 
			
		||||
 | 
			
		||||
        /////////////////////////////////////////////////////
 | 
			
		||||
        // src_o = Mdag * (source_o - Moe MeeInv source_e)
 | 
			
		||||
        /////////////////////////////////////////////////////
 | 
			
		||||
        _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even );
 | 
			
		||||
        _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );     
 | 
			
		||||
        src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );     
 | 
			
		||||
      }
 | 
			
		||||
      
 | 
			
		||||
      virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol)
 | 
			
		||||
      {
 | 
			
		||||
        GridBase* grid  = _Matrix.RedBlackGrid();
 | 
			
		||||
        GridBase* fgrid = _Matrix.Grid();
 | 
			
		||||
 | 
			
		||||
        Field     tmp(grid);
 | 
			
		||||
        Field   sol_e(grid);
 | 
			
		||||
        Field src_e_i(grid);
 | 
			
		||||
        
 | 
			
		||||
        ///////////////////////////////////////////////////
 | 
			
		||||
        // sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
 | 
			
		||||
        ///////////////////////////////////////////////////
 | 
			
		||||
        _Matrix.Meooe(sol_o, tmp);         assert(     tmp.Checkerboard() == Even );
 | 
			
		||||
        src_e_i = src_e - tmp;             assert( src_e_i.Checkerboard() == Even );
 | 
			
		||||
        _Matrix.MooeeInv(src_e_i, sol_e);  assert(   sol_e.Checkerboard() == Even );
 | 
			
		||||
       
 | 
			
		||||
        setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even );
 | 
			
		||||
        setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd  );
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o)
 | 
			
		||||
      {
 | 
			
		||||
        NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix);
 | 
			
		||||
        this->_HermitianRBSolver(_OpEO, src_o, sol_o);  assert(sol_o.Checkerboard() == Odd);
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o)
 | 
			
		||||
      {
 | 
			
		||||
        NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix);
 | 
			
		||||
        this->_HermitianRBSolver(_OpEO, src_o, sol_o); 
 | 
			
		||||
      }
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Site diagonal is identity, right preconditioned by Mee^inv
 | 
			
		||||
  // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta
 | 
			
		||||
@@ -482,5 +546,76 @@ namespace Grid {
 | 
			
		||||
      this->_HermitianRBSolver(_HermOpEO,src_o,sol_o); 
 | 
			
		||||
    }
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
  template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field> 
 | 
			
		||||
  {
 | 
			
		||||
    public:
 | 
			
		||||
      typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
 | 
			
		||||
 | 
			
		||||
      /////////////////////////////////////////////////////
 | 
			
		||||
      // Wrap the usual normal equations Schur trick
 | 
			
		||||
      /////////////////////////////////////////////////////
 | 
			
		||||
      NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false,
 | 
			
		||||
          const bool _solnAsInitGuess = false)  
 | 
			
		||||
      : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {};
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o)
 | 
			
		||||
      {
 | 
			
		||||
        GridBase* grid  = _Matrix.RedBlackGrid();
 | 
			
		||||
        GridBase* fgrid = _Matrix.Grid();
 | 
			
		||||
 | 
			
		||||
        Field  tmp(grid);
 | 
			
		||||
        Field Mtmp(grid);
 | 
			
		||||
 | 
			
		||||
        pickCheckerboard(Even, src_e, src);
 | 
			
		||||
        pickCheckerboard(Odd , src_o, src);
 | 
			
		||||
      
 | 
			
		||||
        /////////////////////////////////////////////////////
 | 
			
		||||
        // src_o = Mdag * (source_o - Moe MeeInv source_e)
 | 
			
		||||
        /////////////////////////////////////////////////////
 | 
			
		||||
        _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even );
 | 
			
		||||
        _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );     
 | 
			
		||||
        src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );     
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol)
 | 
			
		||||
      {
 | 
			
		||||
        GridBase* grid  = _Matrix.RedBlackGrid();
 | 
			
		||||
        GridBase* fgrid = _Matrix.Grid();
 | 
			
		||||
 | 
			
		||||
        Field sol_o_i(grid);
 | 
			
		||||
        Field     tmp(grid);
 | 
			
		||||
        Field   sol_e(grid);
 | 
			
		||||
 | 
			
		||||
        ////////////////////////////////////////////////
 | 
			
		||||
        // MooeeInv due to pecond
 | 
			
		||||
        ////////////////////////////////////////////////
 | 
			
		||||
        _Matrix.MooeeInv(sol_o, tmp);
 | 
			
		||||
        sol_o_i = tmp;
 | 
			
		||||
 | 
			
		||||
        ///////////////////////////////////////////////////
 | 
			
		||||
        // sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
 | 
			
		||||
        ///////////////////////////////////////////////////
 | 
			
		||||
        _Matrix.Meooe(sol_o_i, tmp);    assert(   tmp.Checkerboard() == Even );
 | 
			
		||||
        tmp = src_e - tmp;              assert( src_e.Checkerboard() == Even );
 | 
			
		||||
        _Matrix.MooeeInv(tmp, sol_e);   assert( sol_e.Checkerboard() == Even );
 | 
			
		||||
       
 | 
			
		||||
        setCheckerboard(sol, sol_e);    assert(   sol_e.Checkerboard() == Even );
 | 
			
		||||
        setCheckerboard(sol, sol_o_i);  assert( sol_o_i.Checkerboard() == Odd  );
 | 
			
		||||
      };
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o)
 | 
			
		||||
      {
 | 
			
		||||
        NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix);
 | 
			
		||||
        this->_HermitianRBSolver(_OpEO, src_o, sol_o);
 | 
			
		||||
      };
 | 
			
		||||
 | 
			
		||||
      virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o,  std::vector<Field>& sol_o)
 | 
			
		||||
      {
 | 
			
		||||
        NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix);
 | 
			
		||||
        this->_HermitianRBSolver(_OpEO, src_o, sol_o); 
 | 
			
		||||
      }
 | 
			
		||||
  };
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 
 | 
			
		||||
@@ -26,118 +26,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#ifndef GRID_ALIGNED_ALLOCATOR_H
 | 
			
		||||
#define GRID_ALIGNED_ALLOCATOR_H
 | 
			
		||||
 | 
			
		||||
#ifdef HAVE_MALLOC_MALLOC_H
 | 
			
		||||
#include <malloc/malloc.h>
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef HAVE_MALLOC_H
 | 
			
		||||
#include <malloc.h>
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#ifdef HAVE_MM_MALLOC_H
 | 
			
		||||
#include <mm_malloc.h>
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#define POINTER_CACHE
 | 
			
		||||
#define GRID_ALLOC_ALIGN (2*1024*1024)
 | 
			
		||||
#pragma once
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
// Move control to configure.ac and Config.h?
 | 
			
		||||
#ifdef POINTER_CACHE
 | 
			
		||||
class PointerCache {
 | 
			
		||||
private:
 | 
			
		||||
/*Pinning pages is costly*/
 | 
			
		||||
/*Could maintain separate large and small allocation caches*/
 | 
			
		||||
#ifdef GRID_NVCC 
 | 
			
		||||
  static const int Ncache=128;
 | 
			
		||||
#else
 | 
			
		||||
  static const int Ncache=8;
 | 
			
		||||
#endif
 | 
			
		||||
  static int victim;
 | 
			
		||||
 | 
			
		||||
  typedef struct { 
 | 
			
		||||
    void *address;
 | 
			
		||||
    size_t bytes;
 | 
			
		||||
    int valid;
 | 
			
		||||
  } PointerCacheEntry;
 | 
			
		||||
    
 | 
			
		||||
  static PointerCacheEntry Entries[Ncache];
 | 
			
		||||
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  static void *Insert(void *ptr,size_t bytes) ;
 | 
			
		||||
  static void *Lookup(size_t bytes) ;
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
#endif  
 | 
			
		||||
 | 
			
		||||
std::string sizeString(size_t bytes);
 | 
			
		||||
 | 
			
		||||
struct MemoryStats
 | 
			
		||||
{
 | 
			
		||||
  size_t totalAllocated{0}, maxAllocated{0}, 
 | 
			
		||||
    currentlyAllocated{0}, totalFreed{0};
 | 
			
		||||
};
 | 
			
		||||
    
 | 
			
		||||
class MemoryProfiler
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  static MemoryStats *stats;
 | 
			
		||||
  static bool        debug;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")"
 | 
			
		||||
#define profilerDebugPrint						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
#define profilerAllocate(bytes)						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      s->totalAllocated     += (bytes);					\
 | 
			
		||||
      s->currentlyAllocated += (bytes);					\
 | 
			
		||||
      s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \
 | 
			
		||||
    }									\
 | 
			
		||||
  if (MemoryProfiler::debug)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \
 | 
			
		||||
      profilerDebugPrint;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
#define profilerFree(bytes)						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      s->totalFreed         += (bytes);					\
 | 
			
		||||
      s->currentlyAllocated -= (bytes);					\
 | 
			
		||||
    }									\
 | 
			
		||||
  if (MemoryProfiler::debug)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \
 | 
			
		||||
      profilerDebugPrint;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
void check_huge_pages(void *Buf,uint64_t BYTES);
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////
 | 
			
		||||
// A lattice of something, but assume the something is SIMDized.
 | 
			
		||||
////////////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
template<typename _Tp>
 | 
			
		||||
class alignedAllocator {
 | 
			
		||||
public: 
 | 
			
		||||
@@ -161,89 +53,131 @@ public:
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n*sizeof(_Tp);
 | 
			
		||||
    profilerAllocate(bytes);
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
#ifdef POINTER_CACHE
 | 
			
		||||
    _Tp *ptr = (_Tp *) PointerCache::Lookup(bytes);
 | 
			
		||||
#else
 | 
			
		||||
    pointer ptr = nullptr;
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
    ////////////////////////////////////
 | 
			
		||||
    // Unified (managed) memory
 | 
			
		||||
    ////////////////////////////////////
 | 
			
		||||
    if ( ptr == (_Tp *) NULL ) {
 | 
			
		||||
      //      printf(" alignedAllocater cache miss %ld bytes ",bytes);      BACKTRACEFP(stdout);
 | 
			
		||||
      auto err = cudaMallocManaged((void **)&ptr,bytes);
 | 
			
		||||
      if( err != cudaSuccess ) {
 | 
			
		||||
	ptr = (_Tp *) NULL;
 | 
			
		||||
	std::cerr << " cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl;
 | 
			
		||||
	assert(0);
 | 
			
		||||
      }
 | 
			
		||||
    } 
 | 
			
		||||
    assert( ptr != (_Tp *)NULL);
 | 
			
		||||
#else 
 | 
			
		||||
    //////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
    // 2MB align; could make option probably doesn't need configurability
 | 
			
		||||
    //////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  #ifdef HAVE_MM_MALLOC_H
 | 
			
		||||
    if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) _mm_malloc(bytes,GRID_ALLOC_ALIGN);
 | 
			
		||||
  #else
 | 
			
		||||
    if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN,bytes);
 | 
			
		||||
  #endif
 | 
			
		||||
    assert( ptr != (_Tp *)NULL);
 | 
			
		||||
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
    // First touch optimise in threaded loop 
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
    uint64_t *cp = (uint64_t *)ptr;
 | 
			
		||||
    thread_for(n,bytes/sizeof(uint64_t), { // need only one touch per page
 | 
			
		||||
      cp[n]=0;
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
    _Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes);
 | 
			
		||||
    assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
 | 
			
		||||
    return ptr;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void deallocate(pointer __p, size_type __n) { 
 | 
			
		||||
  void deallocate(pointer __p, size_type __n) 
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n * sizeof(_Tp);
 | 
			
		||||
 | 
			
		||||
    profilerFree(bytes);
 | 
			
		||||
 | 
			
		||||
#ifdef POINTER_CACHE
 | 
			
		||||
    pointer __freeme = (pointer)PointerCache::Insert((void *)__p,bytes);
 | 
			
		||||
#else 
 | 
			
		||||
    pointer __freeme = __p;
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
    if ( __freeme ) cudaFree((void *)__freeme);
 | 
			
		||||
#else 
 | 
			
		||||
  #ifdef HAVE_MM_MALLOC_H
 | 
			
		||||
    if ( __freeme ) _mm_free((void *)__freeme); 
 | 
			
		||||
  #else
 | 
			
		||||
    if ( __freeme ) free((void *)__freeme);
 | 
			
		||||
  #endif
 | 
			
		||||
#endif
 | 
			
		||||
    MemoryManager::CpuFree((void *)__p,bytes);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // FIXME: hack for the copy constructor, eventually it must be avoided
 | 
			
		||||
  void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); };
 | 
			
		||||
  //void construct(pointer __p, const _Tp& __val) { };
 | 
			
		||||
  // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop
 | 
			
		||||
  void construct(pointer __p, const _Tp& __val) { assert(0);};
 | 
			
		||||
  void construct(pointer __p) { };
 | 
			
		||||
  void destroy(pointer __p) { };
 | 
			
		||||
};
 | 
			
		||||
template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; }
 | 
			
		||||
template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; }
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Unified virtual memory
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<typename _Tp>
 | 
			
		||||
class uvmAllocator {
 | 
			
		||||
public: 
 | 
			
		||||
  typedef std::size_t     size_type;
 | 
			
		||||
  typedef std::ptrdiff_t  difference_type;
 | 
			
		||||
  typedef _Tp*       pointer;
 | 
			
		||||
  typedef const _Tp* const_pointer;
 | 
			
		||||
  typedef _Tp&       reference;
 | 
			
		||||
  typedef const _Tp& const_reference;
 | 
			
		||||
  typedef _Tp        value_type;
 | 
			
		||||
 | 
			
		||||
  template<typename _Tp1>  struct rebind { typedef uvmAllocator<_Tp1> other; };
 | 
			
		||||
  uvmAllocator() throw() { }
 | 
			
		||||
  uvmAllocator(const uvmAllocator&) throw() { }
 | 
			
		||||
  template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { }
 | 
			
		||||
  ~uvmAllocator() throw() { }
 | 
			
		||||
  pointer       address(reference __x)       const { return &__x; }
 | 
			
		||||
  size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); }
 | 
			
		||||
 | 
			
		||||
  pointer allocate(size_type __n, const void* _p= 0)
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n*sizeof(_Tp);
 | 
			
		||||
    profilerAllocate(bytes);
 | 
			
		||||
    _Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes);
 | 
			
		||||
    assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
 | 
			
		||||
    return ptr;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void deallocate(pointer __p, size_type __n) 
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n * sizeof(_Tp);
 | 
			
		||||
    profilerFree(bytes);
 | 
			
		||||
    MemoryManager::SharedFree((void *)__p,bytes);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); };
 | 
			
		||||
  void construct(pointer __p) { };
 | 
			
		||||
  void destroy(pointer __p) { };
 | 
			
		||||
};
 | 
			
		||||
template<typename _Tp>  inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; }
 | 
			
		||||
template<typename _Tp>  inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; }
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Device memory
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<typename _Tp>
 | 
			
		||||
class devAllocator {
 | 
			
		||||
public: 
 | 
			
		||||
  typedef std::size_t     size_type;
 | 
			
		||||
  typedef std::ptrdiff_t  difference_type;
 | 
			
		||||
  typedef _Tp*       pointer;
 | 
			
		||||
  typedef const _Tp* const_pointer;
 | 
			
		||||
  typedef _Tp&       reference;
 | 
			
		||||
  typedef const _Tp& const_reference;
 | 
			
		||||
  typedef _Tp        value_type;
 | 
			
		||||
 | 
			
		||||
  template<typename _Tp1>  struct rebind { typedef devAllocator<_Tp1> other; };
 | 
			
		||||
  devAllocator() throw() { }
 | 
			
		||||
  devAllocator(const devAllocator&) throw() { }
 | 
			
		||||
  template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { }
 | 
			
		||||
  ~devAllocator() throw() { }
 | 
			
		||||
  pointer       address(reference __x)       const { return &__x; }
 | 
			
		||||
  size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); }
 | 
			
		||||
 | 
			
		||||
  pointer allocate(size_type __n, const void* _p= 0)
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n*sizeof(_Tp);
 | 
			
		||||
    profilerAllocate(bytes);
 | 
			
		||||
    _Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes);
 | 
			
		||||
    assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
 | 
			
		||||
    return ptr;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void deallocate(pointer __p, size_type __n) 
 | 
			
		||||
  { 
 | 
			
		||||
    size_type bytes = __n * sizeof(_Tp);
 | 
			
		||||
    profilerFree(bytes);
 | 
			
		||||
    MemoryManager::AcceleratorFree((void *)__p,bytes);
 | 
			
		||||
  }
 | 
			
		||||
  void construct(pointer __p, const _Tp& __val) { };
 | 
			
		||||
  void construct(pointer __p) { };
 | 
			
		||||
  void destroy(pointer __p) { };
 | 
			
		||||
};
 | 
			
		||||
template<typename _Tp>  inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; }
 | 
			
		||||
template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; }
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Template typedefs
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class T> using commAllocator = alignedAllocator<T>;
 | 
			
		||||
template<class T> using Vector     = std::vector<T,alignedAllocator<T> >;           
 | 
			
		||||
template<class T> using commVector = std::vector<T,alignedAllocator<T> >;
 | 
			
		||||
template<class T> using Matrix     = std::vector<std::vector<T,alignedAllocator<T> > >;
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT
 | 
			
		||||
// Cshift on device
 | 
			
		||||
template<class T> using cshiftAllocator = devAllocator<T>;
 | 
			
		||||
#else
 | 
			
		||||
// Cshift on host
 | 
			
		||||
template<class T> using cshiftAllocator = std::allocator<T>;
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
template<class T> using Vector        = std::vector<T,uvmAllocator<T> >;           
 | 
			
		||||
template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;           
 | 
			
		||||
template<class T> using commVector = std::vector<T,devAllocator<T> >;
 | 
			
		||||
template<class T> using cshiftVector = std::vector<T,cshiftAllocator<T> >;
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,4 @@
 | 
			
		||||
#pragma once
 | 
			
		||||
#include <Grid/allocator/MemoryStats.h>
 | 
			
		||||
#include <Grid/allocator/MemoryManager.h>
 | 
			
		||||
#include <Grid/allocator/AlignedAllocator.h>
 | 
			
		||||
							
								
								
									
										254
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										254
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,254 @@
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
/*Allocation types, saying which pointer cache should be used*/
 | 
			
		||||
#define Cpu      (0)
 | 
			
		||||
#define CpuSmall (1)
 | 
			
		||||
#define Acc      (2)
 | 
			
		||||
#define AccSmall (3)
 | 
			
		||||
#define Shared   (4)
 | 
			
		||||
#define SharedSmall (5)
 | 
			
		||||
uint64_t total_shared;
 | 
			
		||||
uint64_t total_device;
 | 
			
		||||
uint64_t total_host;;
 | 
			
		||||
void MemoryManager::PrintBytes(void)
 | 
			
		||||
{
 | 
			
		||||
  std::cout << " MemoryManager : "<<total_shared<<" shared      bytes "<<std::endl;
 | 
			
		||||
  std::cout << " MemoryManager : "<<total_device<<" accelerator bytes "<<std::endl;
 | 
			
		||||
  std::cout << " MemoryManager : "<<total_host  <<" cpu         bytes "<<std::endl;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Data tables for recently freed pooiniter caches
 | 
			
		||||
//////////////////////////////////////////////////////////////////////
 | 
			
		||||
MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax];
 | 
			
		||||
int MemoryManager::Victim[MemoryManager::NallocType];
 | 
			
		||||
int MemoryManager::Ncache[MemoryManager::NallocType] = { 8, 32, 8, 32, 8, 32 };
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Actual allocation and deallocation utils
 | 
			
		||||
//////////////////////////////////////////////////////////////////////
 | 
			
		||||
void *MemoryManager::AcceleratorAllocate(size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *ptr = (void *) Lookup(bytes,Acc);
 | 
			
		||||
  if ( ptr == (void *) NULL ) {
 | 
			
		||||
    ptr = (void *) acceleratorAllocDevice(bytes);
 | 
			
		||||
    total_device+=bytes;
 | 
			
		||||
  }
 | 
			
		||||
  return ptr;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::AcceleratorFree    (void *ptr,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *__freeme = Insert(ptr,bytes,Acc);
 | 
			
		||||
  if ( __freeme ) {
 | 
			
		||||
    acceleratorFreeDevice(__freeme);
 | 
			
		||||
    total_device-=bytes;
 | 
			
		||||
    //    PrintBytes();
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void *MemoryManager::SharedAllocate(size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *ptr = (void *) Lookup(bytes,Shared);
 | 
			
		||||
  if ( ptr == (void *) NULL ) {
 | 
			
		||||
    ptr = (void *) acceleratorAllocShared(bytes);
 | 
			
		||||
    total_shared+=bytes;
 | 
			
		||||
    //    std::cout <<"AcceleratorAllocate: allocated Shared pointer "<<std::hex<<ptr<<std::dec<<std::endl;
 | 
			
		||||
    //    PrintBytes();
 | 
			
		||||
  }
 | 
			
		||||
  return ptr;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::SharedFree    (void *ptr,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *__freeme = Insert(ptr,bytes,Shared);
 | 
			
		||||
  if ( __freeme ) {
 | 
			
		||||
    acceleratorFreeShared(__freeme);
 | 
			
		||||
    total_shared-=bytes;
 | 
			
		||||
    //    PrintBytes();
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
#ifdef GRID_UVM
 | 
			
		||||
void *MemoryManager::CpuAllocate(size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *ptr = (void *) Lookup(bytes,Cpu);
 | 
			
		||||
  if ( ptr == (void *) NULL ) {
 | 
			
		||||
    ptr = (void *) acceleratorAllocShared(bytes);
 | 
			
		||||
    total_host+=bytes;
 | 
			
		||||
  }
 | 
			
		||||
  return ptr;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::CpuFree    (void *_ptr,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  NotifyDeletion(_ptr);
 | 
			
		||||
  void *__freeme = Insert(_ptr,bytes,Cpu);
 | 
			
		||||
  if ( __freeme ) { 
 | 
			
		||||
    acceleratorFreeShared(__freeme);
 | 
			
		||||
    total_host-=bytes;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
#else
 | 
			
		||||
void *MemoryManager::CpuAllocate(size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  void *ptr = (void *) Lookup(bytes,Cpu);
 | 
			
		||||
  if ( ptr == (void *) NULL ) {
 | 
			
		||||
    ptr = (void *) acceleratorAllocCpu(bytes);
 | 
			
		||||
    total_host+=bytes;
 | 
			
		||||
  }
 | 
			
		||||
  return ptr;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::CpuFree    (void *_ptr,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  NotifyDeletion(_ptr);
 | 
			
		||||
  void *__freeme = Insert(_ptr,bytes,Cpu);
 | 
			
		||||
  if ( __freeme ) { 
 | 
			
		||||
    acceleratorFreeCpu(__freeme);
 | 
			
		||||
    total_host-=bytes;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////
 | 
			
		||||
// call only once
 | 
			
		||||
//////////////////////////////////////////
 | 
			
		||||
void MemoryManager::Init(void)
 | 
			
		||||
{
 | 
			
		||||
 | 
			
		||||
  char * str;
 | 
			
		||||
  int Nc;
 | 
			
		||||
  int NcS;
 | 
			
		||||
  
 | 
			
		||||
  str= getenv("GRID_ALLOC_NCACHE_LARGE");
 | 
			
		||||
  if ( str ) {
 | 
			
		||||
    Nc = atoi(str);
 | 
			
		||||
    if ( (Nc>=0) && (Nc < NallocCacheMax)) {
 | 
			
		||||
      Ncache[Cpu]=Nc;
 | 
			
		||||
      Ncache[Acc]=Nc;
 | 
			
		||||
      Ncache[Shared]=Nc;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  str= getenv("GRID_ALLOC_NCACHE_SMALL");
 | 
			
		||||
  if ( str ) {
 | 
			
		||||
    Nc = atoi(str);
 | 
			
		||||
    if ( (Nc>=0) && (Nc < NallocCacheMax)) {
 | 
			
		||||
      Ncache[CpuSmall]=Nc;
 | 
			
		||||
      Ncache[AccSmall]=Nc;
 | 
			
		||||
      Ncache[SharedSmall]=Nc;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void MemoryManager::InitMessage(void) {
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_UVM
 | 
			
		||||
  std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
  
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl;
 | 
			
		||||
#ifdef ALLOCATION_CACHE
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
  
 | 
			
		||||
#ifdef GRID_UVM
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl;
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_SYCL
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#else
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl;
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_SYCL
 | 
			
		||||
  std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl;
 | 
			
		||||
#endif
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void *MemoryManager::Insert(void *ptr,size_t bytes,int type) 
 | 
			
		||||
{
 | 
			
		||||
#ifdef ALLOCATION_CACHE
 | 
			
		||||
  bool small = (bytes < GRID_ALLOC_SMALL_LIMIT);
 | 
			
		||||
  int cache = type + small;
 | 
			
		||||
  return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache]);  
 | 
			
		||||
#else
 | 
			
		||||
  return ptr;
 | 
			
		||||
#endif
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim) 
 | 
			
		||||
{
 | 
			
		||||
  assert(ncache>0);
 | 
			
		||||
#ifdef GRID_OMP
 | 
			
		||||
  assert(omp_in_parallel()==0);
 | 
			
		||||
#endif 
 | 
			
		||||
 | 
			
		||||
  void * ret = NULL;
 | 
			
		||||
  int v = -1;
 | 
			
		||||
 | 
			
		||||
  for(int e=0;e<ncache;e++) {
 | 
			
		||||
    if ( entries[e].valid==0 ) {
 | 
			
		||||
      v=e; 
 | 
			
		||||
      break;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( v==-1 ) {
 | 
			
		||||
    v=victim;
 | 
			
		||||
    victim = (victim+1)%ncache;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( entries[v].valid ) {
 | 
			
		||||
    ret = entries[v].address;
 | 
			
		||||
    entries[v].valid = 0;
 | 
			
		||||
    entries[v].address = NULL;
 | 
			
		||||
    entries[v].bytes = 0;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  entries[v].address=ptr;
 | 
			
		||||
  entries[v].bytes  =bytes;
 | 
			
		||||
  entries[v].valid  =1;
 | 
			
		||||
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void *MemoryManager::Lookup(size_t bytes,int type)
 | 
			
		||||
{
 | 
			
		||||
#ifdef ALLOCATION_CACHE
 | 
			
		||||
  bool small = (bytes < GRID_ALLOC_SMALL_LIMIT);
 | 
			
		||||
  int cache = type+small;
 | 
			
		||||
  return Lookup(bytes,Entries[cache],Ncache[cache]);
 | 
			
		||||
#else
 | 
			
		||||
  return NULL;
 | 
			
		||||
#endif
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache) 
 | 
			
		||||
{
 | 
			
		||||
  assert(ncache>0);
 | 
			
		||||
#ifdef GRID_OMP
 | 
			
		||||
  assert(omp_in_parallel()==0);
 | 
			
		||||
#endif 
 | 
			
		||||
  for(int e=0;e<ncache;e++){
 | 
			
		||||
    if ( entries[e].valid && ( entries[e].bytes == bytes ) ) {
 | 
			
		||||
      entries[e].valid = 0;
 | 
			
		||||
      return entries[e].address;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
  return NULL;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
							
								
								
									
										180
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										180
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,180 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/MemoryManager.h
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#pragma once
 | 
			
		||||
#include <list> 
 | 
			
		||||
#include <unordered_map>  
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
// Move control to configure.ac and Config.h?
 | 
			
		||||
 | 
			
		||||
#define GRID_ALLOC_SMALL_LIMIT (4096)
 | 
			
		||||
 | 
			
		||||
/*Pinning pages is costly*/
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Advise the LatticeAccelerator class
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
enum ViewAdvise {
 | 
			
		||||
 AdviseDefault       = 0x0,    // Regular data
 | 
			
		||||
 AdviseInfrequentUse = 0x1     // Advise that the data is used infrequently.  This can
 | 
			
		||||
                               // significantly influence performance of bulk storage.
 | 
			
		||||
 
 | 
			
		||||
 // AdviseTransient      = 0x2,   // Data will mostly be read.  On some architectures
 | 
			
		||||
                               // enables read-only copies of memory to be kept on
 | 
			
		||||
                               // host and device.
 | 
			
		||||
 | 
			
		||||
 // AdviseAcceleratorWriteDiscard = 0x4  // Field will be written in entirety on device
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// View Access Mode
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
enum ViewMode {
 | 
			
		||||
  AcceleratorRead  = 0x01,
 | 
			
		||||
  AcceleratorWrite = 0x02,
 | 
			
		||||
  AcceleratorWriteDiscard = 0x04,
 | 
			
		||||
  CpuRead  = 0x08,
 | 
			
		||||
  CpuWrite = 0x10,
 | 
			
		||||
  CpuWriteDiscard = 0x10 // same for now
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
class MemoryManager {
 | 
			
		||||
private:
 | 
			
		||||
 | 
			
		||||
  ////////////////////////////////////////////////////////////
 | 
			
		||||
  // For caching recently freed allocations
 | 
			
		||||
  ////////////////////////////////////////////////////////////
 | 
			
		||||
  typedef struct { 
 | 
			
		||||
    void *address;
 | 
			
		||||
    size_t bytes;
 | 
			
		||||
    int valid;
 | 
			
		||||
  } AllocationCacheEntry;
 | 
			
		||||
 | 
			
		||||
  static const int NallocCacheMax=128; 
 | 
			
		||||
  static const int NallocType=6;
 | 
			
		||||
  static AllocationCacheEntry Entries[NallocType][NallocCacheMax];
 | 
			
		||||
  static int Victim[NallocType];
 | 
			
		||||
  static int Ncache[NallocType];
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////
 | 
			
		||||
  // Free pool
 | 
			
		||||
  /////////////////////////////////////////////////
 | 
			
		||||
  static void *Insert(void *ptr,size_t bytes,int type) ;
 | 
			
		||||
  static void *Lookup(size_t bytes,int type) ;
 | 
			
		||||
  static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim) ;
 | 
			
		||||
  static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache) ;
 | 
			
		||||
 | 
			
		||||
  static void PrintBytes(void);
 | 
			
		||||
 public:
 | 
			
		||||
  static void Init(void);
 | 
			
		||||
  static void InitMessage(void);
 | 
			
		||||
  static void *AcceleratorAllocate(size_t bytes);
 | 
			
		||||
  static void  AcceleratorFree    (void *ptr,size_t bytes);
 | 
			
		||||
  static void *SharedAllocate(size_t bytes);
 | 
			
		||||
  static void  SharedFree    (void *ptr,size_t bytes);
 | 
			
		||||
  static void *CpuAllocate(size_t bytes);
 | 
			
		||||
  static void  CpuFree    (void *ptr,size_t bytes);
 | 
			
		||||
 | 
			
		||||
  ////////////////////////////////////////////////////////
 | 
			
		||||
  // Footprint tracking
 | 
			
		||||
  ////////////////////////////////////////////////////////
 | 
			
		||||
  static uint64_t     DeviceBytes;
 | 
			
		||||
  static uint64_t     DeviceLRUBytes;
 | 
			
		||||
  static uint64_t     DeviceMaxBytes;
 | 
			
		||||
  static uint64_t     HostToDeviceBytes;
 | 
			
		||||
  static uint64_t     DeviceToHostBytes;
 | 
			
		||||
  static uint64_t     HostToDeviceXfer;
 | 
			
		||||
  static uint64_t     DeviceToHostXfer;
 | 
			
		||||
 
 | 
			
		||||
 private:
 | 
			
		||||
#ifndef GRID_UVM
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Data tables for ViewCache
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////
 | 
			
		||||
  typedef std::list<uint64_t> LRU_t;
 | 
			
		||||
  typedef typename LRU_t::iterator LRUiterator;
 | 
			
		||||
  typedef struct { 
 | 
			
		||||
    int        LRU_valid;
 | 
			
		||||
    LRUiterator LRU_entry;
 | 
			
		||||
    uint64_t CpuPtr;
 | 
			
		||||
    uint64_t AccPtr;
 | 
			
		||||
    size_t   bytes;
 | 
			
		||||
    uint32_t transient;
 | 
			
		||||
    uint32_t state;
 | 
			
		||||
    uint32_t accLock;
 | 
			
		||||
    uint32_t cpuLock;
 | 
			
		||||
  } AcceleratorViewEntry;
 | 
			
		||||
  
 | 
			
		||||
  typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t;
 | 
			
		||||
  typedef typename AccViewTable_t::iterator AccViewTableIterator ;
 | 
			
		||||
 | 
			
		||||
  static AccViewTable_t AccViewTable;
 | 
			
		||||
  static LRU_t LRU;
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////
 | 
			
		||||
  // Device motion
 | 
			
		||||
  /////////////////////////////////////////////////
 | 
			
		||||
  static void  Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
 | 
			
		||||
  static void  EvictVictims(uint64_t bytes); // Frees up <bytes>
 | 
			
		||||
  static void  Evict(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  Flush(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  Clone(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  AccDiscard(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  CpuDiscard(AcceleratorViewEntry &AccCache);
 | 
			
		||||
 | 
			
		||||
  //  static void  LRUupdate(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  LRUinsert(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  static void  LRUremove(AcceleratorViewEntry &AccCache);
 | 
			
		||||
  
 | 
			
		||||
  // manage entries in the table
 | 
			
		||||
  static int                  EntryPresent(uint64_t CpuPtr);
 | 
			
		||||
  static void                 EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
 | 
			
		||||
  static void                 EntryErase (uint64_t CpuPtr);
 | 
			
		||||
  static AccViewTableIterator EntryLookup(uint64_t CpuPtr);
 | 
			
		||||
  static void                 EntrySet   (uint64_t CpuPtr,AcceleratorViewEntry &entry);
 | 
			
		||||
 | 
			
		||||
  static void     AcceleratorViewClose(uint64_t AccPtr);
 | 
			
		||||
  static uint64_t AcceleratorViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
 | 
			
		||||
  static void     CpuViewClose(uint64_t Ptr);
 | 
			
		||||
  static uint64_t CpuViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
 | 
			
		||||
#endif
 | 
			
		||||
  static void NotifyDeletion(void * CpuPtr);
 | 
			
		||||
 | 
			
		||||
 public:
 | 
			
		||||
  static void Print(void);
 | 
			
		||||
  static int   isOpen   (void* CpuPtr);
 | 
			
		||||
  static void  ViewClose(void* CpuPtr,ViewMode mode);
 | 
			
		||||
  static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
							
								
								
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,478 @@
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
#ifndef GRID_UVM
 | 
			
		||||
 | 
			
		||||
#warning "Using explicit device memory copies"
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
//define dprintf(...) printf ( __VA_ARGS__ ); fflush(stdout);
 | 
			
		||||
#define dprintf(...)
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////
 | 
			
		||||
// For caching copies of data on device
 | 
			
		||||
////////////////////////////////////////////////////////////
 | 
			
		||||
MemoryManager::AccViewTable_t MemoryManager::AccViewTable;
 | 
			
		||||
MemoryManager::LRU_t MemoryManager::LRU;
 | 
			
		||||
  
 | 
			
		||||
////////////////////////////////////////////////////////
 | 
			
		||||
// Footprint tracking
 | 
			
		||||
////////////////////////////////////////////////////////
 | 
			
		||||
uint64_t  MemoryManager::DeviceBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceLRUBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128;
 | 
			
		||||
uint64_t  MemoryManager::HostToDeviceBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceToHostBytes;
 | 
			
		||||
uint64_t  MemoryManager::HostToDeviceXfer;
 | 
			
		||||
uint64_t  MemoryManager::DeviceToHostXfer;
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////
 | 
			
		||||
// Priority ordering for unlocked entries
 | 
			
		||||
//  Empty
 | 
			
		||||
//  CpuDirty 
 | 
			
		||||
//  Consistent
 | 
			
		||||
//  AccDirty
 | 
			
		||||
////////////////////////////////////
 | 
			
		||||
#define Empty         (0x0)  /*Entry unoccupied  */
 | 
			
		||||
#define CpuDirty      (0x1)  /*CPU copy is golden, Acc buffer MAY not be allocated*/
 | 
			
		||||
#define Consistent    (0x2)  /*ACC copy AND CPU copy are valid */
 | 
			
		||||
#define AccDirty      (0x4)  /*ACC copy is golden */
 | 
			
		||||
#define EvictNext     (0x8)  /*Priority for eviction*/
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////
 | 
			
		||||
// Mechanics of data table maintenance
 | 
			
		||||
/////////////////////////////////////////////////
 | 
			
		||||
int   MemoryManager::EntryPresent(uint64_t CpuPtr)
 | 
			
		||||
{
 | 
			
		||||
  if(AccViewTable.empty()) return 0;
 | 
			
		||||
 | 
			
		||||
  auto count = AccViewTable.count(CpuPtr);  assert((count==0)||(count==1));
 | 
			
		||||
  return count;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
 | 
			
		||||
{
 | 
			
		||||
  assert(!EntryPresent(CpuPtr));
 | 
			
		||||
  AcceleratorViewEntry AccCache;
 | 
			
		||||
  AccCache.CpuPtr = CpuPtr;
 | 
			
		||||
  AccCache.AccPtr = (uint64_t)NULL;
 | 
			
		||||
  AccCache.bytes  = bytes;
 | 
			
		||||
  AccCache.state  = CpuDirty;
 | 
			
		||||
  AccCache.LRU_valid=0;
 | 
			
		||||
  AccCache.transient=0;
 | 
			
		||||
  AccCache.accLock=0;
 | 
			
		||||
  AccCache.cpuLock=0;
 | 
			
		||||
  AccViewTable[CpuPtr] = AccCache;
 | 
			
		||||
}
 | 
			
		||||
MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr)
 | 
			
		||||
{
 | 
			
		||||
  assert(EntryPresent(CpuPtr));
 | 
			
		||||
  auto AccCacheIterator = AccViewTable.find(CpuPtr);
 | 
			
		||||
  assert(AccCacheIterator!=AccViewTable.end());
 | 
			
		||||
  return AccCacheIterator;
 | 
			
		||||
}
 | 
			
		||||
void MemoryManager::EntryErase(uint64_t CpuPtr)
 | 
			
		||||
{
 | 
			
		||||
  auto AccCache = EntryLookup(CpuPtr);
 | 
			
		||||
  AccViewTable.erase(CpuPtr);
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  assert(AccCache.LRU_valid==0);
 | 
			
		||||
  if (AccCache.transient) { 
 | 
			
		||||
    LRU.push_back(AccCache.CpuPtr);
 | 
			
		||||
    AccCache.LRU_entry = --LRU.end();
 | 
			
		||||
  } else {
 | 
			
		||||
    LRU.push_front(AccCache.CpuPtr);
 | 
			
		||||
    AccCache.LRU_entry = LRU.begin();
 | 
			
		||||
  }
 | 
			
		||||
  AccCache.LRU_valid = 1;
 | 
			
		||||
  DeviceLRUBytes+=AccCache.bytes;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::LRUremove(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  assert(AccCache.LRU_valid==1);
 | 
			
		||||
  LRU.erase(AccCache.LRU_entry);
 | 
			
		||||
  AccCache.LRU_valid = 0;
 | 
			
		||||
  DeviceLRUBytes-=AccCache.bytes;
 | 
			
		||||
}
 | 
			
		||||
/////////////////////////////////////////////////
 | 
			
		||||
// Accelerator cache motion & consistency logic
 | 
			
		||||
/////////////////////////////////////////////////
 | 
			
		||||
void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  ///////////////////////////////////////////////////////////
 | 
			
		||||
  // Remove from Accelerator, remove entry, without flush
 | 
			
		||||
  // Cannot be locked. If allocated Must be in LRU pool.
 | 
			
		||||
  ///////////////////////////////////////////////////////////
 | 
			
		||||
  assert(AccCache.state!=Empty);
 | 
			
		||||
  
 | 
			
		||||
   dprintf("MemoryManager: Discard(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  assert(AccCache.CpuPtr!=(uint64_t)NULL);
 | 
			
		||||
  if(AccCache.AccPtr) {
 | 
			
		||||
    AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
 | 
			
		||||
    DeviceBytes   -=AccCache.bytes;
 | 
			
		||||
    LRUremove(AccCache);
 | 
			
		||||
    dprintf("MemoryManager: Free(%llx) LRU %lld Total %lld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);  
 | 
			
		||||
  }
 | 
			
		||||
  uint64_t CpuPtr = AccCache.CpuPtr;
 | 
			
		||||
  EntryErase(CpuPtr);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Make CPU consistent, remove from Accelerator, remove entry
 | 
			
		||||
  // Cannot be locked. If allocated must be in LRU pool.
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  assert(AccCache.state!=Empty);
 | 
			
		||||
  
 | 
			
		||||
  dprintf("MemoryManager: Evict(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr); 
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  if(AccCache.state==AccDirty) {
 | 
			
		||||
    Flush(AccCache);
 | 
			
		||||
  }
 | 
			
		||||
  assert(AccCache.CpuPtr!=(uint64_t)NULL);
 | 
			
		||||
  if(AccCache.AccPtr) {
 | 
			
		||||
    AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
 | 
			
		||||
    DeviceBytes   -=AccCache.bytes;
 | 
			
		||||
    LRUremove(AccCache);
 | 
			
		||||
    dprintf("MemoryManager: Free(%llx) footprint now %lld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);  
 | 
			
		||||
  }
 | 
			
		||||
  uint64_t CpuPtr = AccCache.CpuPtr;
 | 
			
		||||
  EntryErase(CpuPtr);
 | 
			
		||||
}
 | 
			
		||||
void MemoryManager::Flush(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  assert(AccCache.state==AccDirty);
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
  assert(AccCache.AccPtr!=(uint64_t)NULL);
 | 
			
		||||
  assert(AccCache.CpuPtr!=(uint64_t)NULL);
 | 
			
		||||
  acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
 | 
			
		||||
  dprintf("MemoryManager: Flush  %llx -> %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
 | 
			
		||||
  DeviceToHostBytes+=AccCache.bytes;
 | 
			
		||||
  DeviceToHostXfer++;
 | 
			
		||||
  AccCache.state=Consistent;
 | 
			
		||||
}
 | 
			
		||||
void MemoryManager::Clone(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  assert(AccCache.state==CpuDirty);
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
  assert(AccCache.CpuPtr!=(uint64_t)NULL);
 | 
			
		||||
  if(AccCache.AccPtr==(uint64_t)NULL){
 | 
			
		||||
    AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
 | 
			
		||||
    DeviceBytes+=AccCache.bytes;
 | 
			
		||||
  }
 | 
			
		||||
  dprintf("MemoryManager: Clone %llx <- %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
 | 
			
		||||
  acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
 | 
			
		||||
  HostToDeviceBytes+=AccCache.bytes;
 | 
			
		||||
  HostToDeviceXfer++;
 | 
			
		||||
  AccCache.state=Consistent;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache)
 | 
			
		||||
{
 | 
			
		||||
  assert(AccCache.state!=Empty);
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
  assert(AccCache.CpuPtr!=(uint64_t)NULL);
 | 
			
		||||
  if(AccCache.AccPtr==(uint64_t)NULL){
 | 
			
		||||
    AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
 | 
			
		||||
    DeviceBytes+=AccCache.bytes;
 | 
			
		||||
  }
 | 
			
		||||
  AccCache.state=AccDirty;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// View management
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
void MemoryManager::ViewClose(void* Ptr,ViewMode mode)
 | 
			
		||||
{
 | 
			
		||||
  if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
 | 
			
		||||
    AcceleratorViewClose((uint64_t)Ptr);
 | 
			
		||||
  } else if( (mode==CpuRead)||(mode==CpuWrite)){
 | 
			
		||||
    CpuViewClose((uint64_t)Ptr);
 | 
			
		||||
  } else { 
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
 | 
			
		||||
{
 | 
			
		||||
  uint64_t CpuPtr = (uint64_t)_CpuPtr;
 | 
			
		||||
  if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
 | 
			
		||||
    return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint);
 | 
			
		||||
  } else if( (mode==CpuRead)||(mode==CpuWrite)){
 | 
			
		||||
    return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint);
 | 
			
		||||
  } else { 
 | 
			
		||||
    assert(0);
 | 
			
		||||
    return NULL;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::EvictVictims(uint64_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  while(bytes+DeviceLRUBytes > DeviceMaxBytes){
 | 
			
		||||
    if ( DeviceLRUBytes > 0){
 | 
			
		||||
      assert(LRU.size()>0);
 | 
			
		||||
      uint64_t victim = LRU.back();
 | 
			
		||||
      auto AccCacheIterator = EntryLookup(victim);
 | 
			
		||||
      auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
      Evict(AccCache);
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
 | 
			
		||||
{
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Find if present, otherwise get or force an empty
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  if ( EntryPresent(CpuPtr)==0 ){
 | 
			
		||||
    EntryCreate(CpuPtr,bytes,mode,hint);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  auto AccCacheIterator = EntryLookup(CpuPtr);
 | 
			
		||||
  auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
  if (!AccCache.AccPtr) {
 | 
			
		||||
    EvictVictims(bytes); 
 | 
			
		||||
  } 
 | 
			
		||||
  assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard));
 | 
			
		||||
 | 
			
		||||
  assert(AccCache.cpuLock==0);  // Programming error
 | 
			
		||||
 | 
			
		||||
  if(AccCache.state!=Empty) {
 | 
			
		||||
    dprintf("ViewOpen found entry %llx %llx : %lld %lld\n",
 | 
			
		||||
		    (uint64_t)AccCache.CpuPtr,
 | 
			
		||||
		    (uint64_t)CpuPtr,
 | 
			
		||||
		    (uint64_t)AccCache.bytes,
 | 
			
		||||
		    (uint64_t)bytes);
 | 
			
		||||
    assert(AccCache.CpuPtr == CpuPtr);
 | 
			
		||||
    assert(AccCache.bytes  ==bytes);
 | 
			
		||||
  }
 | 
			
		||||
/*
 | 
			
		||||
 *  State transitions and actions
 | 
			
		||||
 *
 | 
			
		||||
 *  Action  State   StateNext         Flush    Clone
 | 
			
		||||
 *
 | 
			
		||||
 *  AccRead  Empty   Consistent        -        Y
 | 
			
		||||
 *  AccWrite Empty   AccDirty          -        Y
 | 
			
		||||
 *  AccRead  CpuDirty Consistent       -        Y
 | 
			
		||||
 *  AccWrite CpuDirty AccDirty         -        Y
 | 
			
		||||
 *  AccRead  Consistent Consistent     -        - 
 | 
			
		||||
 *  AccWrite Consistent AccDirty       -        - 
 | 
			
		||||
 *  AccRead  AccDirty   AccDirty       -        - 
 | 
			
		||||
 *  AccWrite AccDirty   AccDirty       -        - 
 | 
			
		||||
 */
 | 
			
		||||
  if(AccCache.state==Empty) {
 | 
			
		||||
    assert(AccCache.LRU_valid==0);
 | 
			
		||||
    AccCache.CpuPtr = CpuPtr;
 | 
			
		||||
    AccCache.AccPtr = (uint64_t)NULL;
 | 
			
		||||
    AccCache.bytes  = bytes;
 | 
			
		||||
    AccCache.state  = CpuDirty;   // Cpu starts primary
 | 
			
		||||
    if(mode==AcceleratorWriteDiscard){
 | 
			
		||||
      CpuDiscard(AccCache);
 | 
			
		||||
      AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty
 | 
			
		||||
    } else if(mode==AcceleratorWrite){
 | 
			
		||||
      Clone(AccCache);
 | 
			
		||||
      AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty
 | 
			
		||||
    } else {
 | 
			
		||||
      Clone(AccCache);
 | 
			
		||||
      AccCache.state  = Consistent; // Empty + AccRead => Consistent
 | 
			
		||||
    }
 | 
			
		||||
    AccCache.accLock= 1;
 | 
			
		||||
  } else if(AccCache.state==CpuDirty ){
 | 
			
		||||
    if(mode==AcceleratorWriteDiscard) {
 | 
			
		||||
      CpuDiscard(AccCache);
 | 
			
		||||
      AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty
 | 
			
		||||
    } else if(mode==AcceleratorWrite) {
 | 
			
		||||
      Clone(AccCache);
 | 
			
		||||
      AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty
 | 
			
		||||
    } else {
 | 
			
		||||
      Clone(AccCache);
 | 
			
		||||
      AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent
 | 
			
		||||
    }
 | 
			
		||||
    AccCache.accLock++;
 | 
			
		||||
    dprintf("Copied CpuDirty entry into device accLock %d\n",AccCache.accLock);
 | 
			
		||||
  } else if(AccCache.state==Consistent) {
 | 
			
		||||
    if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
 | 
			
		||||
      AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty
 | 
			
		||||
    else
 | 
			
		||||
      AccCache.state  = Consistent; // Consistent + AccRead => Consistent
 | 
			
		||||
    AccCache.accLock++;
 | 
			
		||||
    dprintf("Consistent entry into device accLock %d\n",AccCache.accLock);
 | 
			
		||||
  } else if(AccCache.state==AccDirty) {
 | 
			
		||||
    if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
 | 
			
		||||
      AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty
 | 
			
		||||
    else
 | 
			
		||||
      AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty
 | 
			
		||||
    AccCache.accLock++;
 | 
			
		||||
    dprintf("AccDirty entry into device accLock %d\n",AccCache.accLock);
 | 
			
		||||
  } else {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // If view is opened on device remove from LRU
 | 
			
		||||
  if(AccCache.LRU_valid==1){
 | 
			
		||||
    // must possibly remove from LRU as now locked on GPU
 | 
			
		||||
    LRUremove(AccCache);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  int transient =hint;
 | 
			
		||||
  AccCache.transient= transient? EvictNext : 0;
 | 
			
		||||
 | 
			
		||||
  return AccCache.AccPtr;
 | 
			
		||||
}
 | 
			
		||||
////////////////////////////////////
 | 
			
		||||
// look up & decrement lock count
 | 
			
		||||
////////////////////////////////////
 | 
			
		||||
void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr)
 | 
			
		||||
{
 | 
			
		||||
  auto AccCacheIterator = EntryLookup(CpuPtr);
 | 
			
		||||
  auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
 | 
			
		||||
  assert(AccCache.cpuLock==0);
 | 
			
		||||
  assert(AccCache.accLock>0);
 | 
			
		||||
 | 
			
		||||
  AccCache.accLock--;
 | 
			
		||||
 | 
			
		||||
  // Move to LRU queue if not locked and close on device
 | 
			
		||||
  if(AccCache.accLock==0) {
 | 
			
		||||
    LRUinsert(AccCache);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void MemoryManager::CpuViewClose(uint64_t CpuPtr)
 | 
			
		||||
{
 | 
			
		||||
  auto AccCacheIterator = EntryLookup(CpuPtr);
 | 
			
		||||
  auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
 | 
			
		||||
  assert(AccCache.cpuLock>0);
 | 
			
		||||
  assert(AccCache.accLock==0);
 | 
			
		||||
 | 
			
		||||
  AccCache.cpuLock--;
 | 
			
		||||
}
 | 
			
		||||
/*
 | 
			
		||||
 *  Action  State   StateNext         Flush    Clone
 | 
			
		||||
 *
 | 
			
		||||
 *  CpuRead  Empty   CpuDirty          -        -
 | 
			
		||||
 *  CpuWrite Empty   CpuDirty          -        -
 | 
			
		||||
 *  CpuRead  CpuDirty CpuDirty         -        -
 | 
			
		||||
 *  CpuWrite CpuDirty CpuDirty         -        - 
 | 
			
		||||
 *  CpuRead  Consistent Consistent     -        - 
 | 
			
		||||
 *  CpuWrite Consistent CpuDirty       -        - 
 | 
			
		||||
 *  CpuRead  AccDirty   Consistent     Y        -
 | 
			
		||||
 *  CpuWrite AccDirty   CpuDirty       Y        -
 | 
			
		||||
 */
 | 
			
		||||
uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient)
 | 
			
		||||
{
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Find if present, otherwise get or force an empty
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  if ( EntryPresent(CpuPtr)==0 ){
 | 
			
		||||
    EntryCreate(CpuPtr,bytes,mode,transient);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  auto AccCacheIterator = EntryLookup(CpuPtr);
 | 
			
		||||
  auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
 | 
			
		||||
  if (!AccCache.AccPtr) {
 | 
			
		||||
     EvictVictims(bytes);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  assert((mode==CpuRead)||(mode==CpuWrite));
 | 
			
		||||
  assert(AccCache.accLock==0);  // Programming error
 | 
			
		||||
 | 
			
		||||
  if(AccCache.state!=Empty) {
 | 
			
		||||
    assert(AccCache.CpuPtr == CpuPtr);
 | 
			
		||||
    assert(AccCache.bytes==bytes);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if(AccCache.state==Empty) {
 | 
			
		||||
    AccCache.CpuPtr = CpuPtr;
 | 
			
		||||
    AccCache.AccPtr = (uint64_t)NULL;
 | 
			
		||||
    AccCache.bytes  = bytes;
 | 
			
		||||
    AccCache.state  = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty
 | 
			
		||||
    AccCache.accLock= 0;
 | 
			
		||||
    AccCache.cpuLock= 1;
 | 
			
		||||
  } else if(AccCache.state==CpuDirty ){
 | 
			
		||||
    // AccPtr dont care, deferred allocate
 | 
			
		||||
    AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty
 | 
			
		||||
    AccCache.cpuLock++;
 | 
			
		||||
  } else if(AccCache.state==Consistent) {
 | 
			
		||||
    assert(AccCache.AccPtr != (uint64_t)NULL);
 | 
			
		||||
    if(mode==CpuWrite)
 | 
			
		||||
      AccCache.state = CpuDirty;   // Consistent +CpuWrite => CpuDirty
 | 
			
		||||
    else 
 | 
			
		||||
      AccCache.state = Consistent; // Consistent +CpuRead  => Consistent
 | 
			
		||||
    AccCache.cpuLock++;
 | 
			
		||||
  } else if(AccCache.state==AccDirty) {
 | 
			
		||||
    assert(AccCache.AccPtr != (uint64_t)NULL);
 | 
			
		||||
    Flush(AccCache);
 | 
			
		||||
    if(mode==CpuWrite) AccCache.state = CpuDirty;   // AccDirty +CpuWrite => CpuDirty, Flush
 | 
			
		||||
    else            AccCache.state = Consistent; // AccDirty +CpuRead  => Consistent, Flush
 | 
			
		||||
    AccCache.cpuLock++;
 | 
			
		||||
  } else {
 | 
			
		||||
    assert(0); // should be unreachable
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  AccCache.transient= transient? EvictNext : 0;
 | 
			
		||||
 | 
			
		||||
  return AccCache.CpuPtr;
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::NotifyDeletion(void *_ptr)
 | 
			
		||||
{
 | 
			
		||||
  // Look up in ViewCache
 | 
			
		||||
  uint64_t ptr = (uint64_t)_ptr;
 | 
			
		||||
  if(EntryPresent(ptr)) {
 | 
			
		||||
    auto e = EntryLookup(ptr);
 | 
			
		||||
    AccDiscard(e->second);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void  MemoryManager::Print(void)
 | 
			
		||||
{
 | 
			
		||||
  std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << "Memory Manager                             " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << DeviceBytes   << " bytes allocated on device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << DeviceLRUBytes<< " bytes evictable on device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << DeviceMaxBytes<< " bytes max on device       " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << HostToDeviceXfer << " transfers        to   device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << DeviceToHostXfer << " transfers        from device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << HostToDeviceBytes<< " bytes transfered to   device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << DeviceToHostBytes<< " bytes transfered from device " << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl;
 | 
			
		||||
  std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
 | 
			
		||||
  for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){
 | 
			
		||||
    auto &AccCache = it->second;
 | 
			
		||||
    
 | 
			
		||||
    std::string str;
 | 
			
		||||
    if ( AccCache.state==Empty    ) str = std::string("Empty");
 | 
			
		||||
    if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty");
 | 
			
		||||
    if ( AccCache.state==AccDirty ) str = std::string("AccDirty");
 | 
			
		||||
    if ( AccCache.state==Consistent)str = std::string("Consistent");
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogDebug << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec
 | 
			
		||||
	      << "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str
 | 
			
		||||
	      << "\t" << AccCache.cpuLock
 | 
			
		||||
	      << "\t" << AccCache.accLock
 | 
			
		||||
	      << "\t" << AccCache.LRU_valid<<std::endl;
 | 
			
		||||
  }
 | 
			
		||||
  std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
int   MemoryManager::isOpen   (void* _CpuPtr) 
 | 
			
		||||
{ 
 | 
			
		||||
  uint64_t CpuPtr = (uint64_t)_CpuPtr;
 | 
			
		||||
  if ( EntryPresent(CpuPtr) ){
 | 
			
		||||
    auto AccCacheIterator = EntryLookup(CpuPtr);
 | 
			
		||||
    auto & AccCache = AccCacheIterator->second;
 | 
			
		||||
    return AccCache.cpuLock+AccCache.accLock;
 | 
			
		||||
  } else { 
 | 
			
		||||
    return 0;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
							
								
								
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,23 @@
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
#ifdef GRID_UVM
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// View management is 1:1 address space mapping
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
uint64_t  MemoryManager::DeviceBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceLRUBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128;
 | 
			
		||||
uint64_t  MemoryManager::HostToDeviceBytes;
 | 
			
		||||
uint64_t  MemoryManager::DeviceToHostBytes;
 | 
			
		||||
uint64_t  MemoryManager::HostToDeviceXfer;
 | 
			
		||||
uint64_t  MemoryManager::DeviceToHostXfer;
 | 
			
		||||
 | 
			
		||||
void  MemoryManager::ViewClose(void* AccPtr,ViewMode mode){};
 | 
			
		||||
void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; };
 | 
			
		||||
int   MemoryManager::isOpen   (void* CpuPtr) { return 0;}
 | 
			
		||||
void  MemoryManager::Print(void){};
 | 
			
		||||
void  MemoryManager::NotifyDeletion(void *ptr){};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
#endif
 | 
			
		||||
@@ -6,72 +6,6 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
MemoryStats *MemoryProfiler::stats = nullptr;
 | 
			
		||||
bool         MemoryProfiler::debug = false;
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#define SMALL_LIMIT (0)
 | 
			
		||||
#else
 | 
			
		||||
#define SMALL_LIMIT (4096)
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
#ifdef POINTER_CACHE
 | 
			
		||||
int PointerCache::victim;
 | 
			
		||||
 | 
			
		||||
PointerCache::PointerCacheEntry PointerCache::Entries[PointerCache::Ncache];
 | 
			
		||||
 | 
			
		||||
void *PointerCache::Insert(void *ptr,size_t bytes) {
 | 
			
		||||
 | 
			
		||||
  if (bytes < SMALL_LIMIT ) return ptr;
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_OMP
 | 
			
		||||
  assert(omp_in_parallel()==0);
 | 
			
		||||
#endif 
 | 
			
		||||
 | 
			
		||||
  void * ret = NULL;
 | 
			
		||||
  int v = -1;
 | 
			
		||||
 | 
			
		||||
  for(int e=0;e<Ncache;e++) {
 | 
			
		||||
    if ( Entries[e].valid==0 ) {
 | 
			
		||||
      v=e; 
 | 
			
		||||
      break;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( v==-1 ) {
 | 
			
		||||
    v=victim;
 | 
			
		||||
    victim = (victim+1)%Ncache;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( Entries[v].valid ) {
 | 
			
		||||
    ret = Entries[v].address;
 | 
			
		||||
    Entries[v].valid = 0;
 | 
			
		||||
    Entries[v].address = NULL;
 | 
			
		||||
    Entries[v].bytes = 0;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  Entries[v].address=ptr;
 | 
			
		||||
  Entries[v].bytes  =bytes;
 | 
			
		||||
  Entries[v].valid  =1;
 | 
			
		||||
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void *PointerCache::Lookup(size_t bytes) {
 | 
			
		||||
 | 
			
		||||
  if (bytes < SMALL_LIMIT ) return NULL;
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_OMP
 | 
			
		||||
  assert(omp_in_parallel()==0);
 | 
			
		||||
#endif 
 | 
			
		||||
 | 
			
		||||
  for(int e=0;e<Ncache;e++){
 | 
			
		||||
    if ( Entries[e].valid && ( Entries[e].bytes == bytes ) ) {
 | 
			
		||||
      Entries[e].valid = 0;
 | 
			
		||||
      return Entries[e].address;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
  return NULL;
 | 
			
		||||
}
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
void check_huge_pages(void *Buf,uint64_t BYTES)
 | 
			
		||||
{
 | 
			
		||||
#ifdef __linux__
 | 
			
		||||
							
								
								
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,95 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/MemoryStats.h
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#pragma once
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
std::string sizeString(size_t bytes);
 | 
			
		||||
 | 
			
		||||
struct MemoryStats
 | 
			
		||||
{
 | 
			
		||||
  size_t totalAllocated{0}, maxAllocated{0}, 
 | 
			
		||||
    currentlyAllocated{0}, totalFreed{0};
 | 
			
		||||
};
 | 
			
		||||
    
 | 
			
		||||
class MemoryProfiler
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  static MemoryStats *stats;
 | 
			
		||||
  static bool        debug;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")"
 | 
			
		||||
#define profilerDebugPrint						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \
 | 
			
		||||
		<< std::endl;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
#define profilerAllocate(bytes)						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      s->totalAllocated     += (bytes);					\
 | 
			
		||||
      s->currentlyAllocated += (bytes);					\
 | 
			
		||||
      s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \
 | 
			
		||||
    }									\
 | 
			
		||||
  if (MemoryProfiler::debug)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \
 | 
			
		||||
      profilerDebugPrint;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
#define profilerFree(bytes)						\
 | 
			
		||||
  if (MemoryProfiler::stats)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      auto s = MemoryProfiler::stats;					\
 | 
			
		||||
      s->totalFreed         += (bytes);					\
 | 
			
		||||
      s->currentlyAllocated -= (bytes);					\
 | 
			
		||||
    }									\
 | 
			
		||||
  if (MemoryProfiler::debug)						\
 | 
			
		||||
    {									\
 | 
			
		||||
      std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \
 | 
			
		||||
      profilerDebugPrint;						\
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
void check_huge_pages(void *Buf,uint64_t BYTES);
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
@@ -81,6 +81,7 @@ public:
 | 
			
		||||
 | 
			
		||||
  bool _isCheckerBoarded; 
 | 
			
		||||
  int        LocallyPeriodic;
 | 
			
		||||
  Coordinate _checker_dim_mask;
 | 
			
		||||
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -38,6 +38,7 @@ class GridCartesian: public GridBase {
 | 
			
		||||
 | 
			
		||||
public:
 | 
			
		||||
  int dummy;
 | 
			
		||||
  Coordinate _checker_dim_mask;
 | 
			
		||||
  virtual int  CheckerBoardFromOindexTable (int Oindex) {
 | 
			
		||||
    return 0;
 | 
			
		||||
  }
 | 
			
		||||
@@ -104,6 +105,7 @@ public:
 | 
			
		||||
    _ldimensions.resize(_ndimension);
 | 
			
		||||
    _rdimensions.resize(_ndimension);
 | 
			
		||||
    _simd_layout.resize(_ndimension);
 | 
			
		||||
    _checker_dim_mask.resize(_ndimension);;
 | 
			
		||||
    _lstart.resize(_ndimension);
 | 
			
		||||
    _lend.resize(_ndimension);
 | 
			
		||||
 | 
			
		||||
@@ -114,6 +116,8 @@ public:
 | 
			
		||||
 | 
			
		||||
    for (int d = 0; d < _ndimension; d++)
 | 
			
		||||
      {
 | 
			
		||||
	_checker_dim_mask[d]=0;
 | 
			
		||||
 | 
			
		||||
        _fdimensions[d] = dimensions[d];   // Global dimensions
 | 
			
		||||
        _gdimensions[d] = _fdimensions[d]; // Global dimensions
 | 
			
		||||
        _simd_layout[d] = simd_layout[d];
 | 
			
		||||
 
 | 
			
		||||
@@ -35,12 +35,28 @@ static const int CbRed  =0;
 | 
			
		||||
static const int CbBlack=1;
 | 
			
		||||
static const int Even   =CbRed;
 | 
			
		||||
static const int Odd    =CbBlack;
 | 
			
		||||
 | 
			
		||||
accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex, Coordinate &rdim, Coordinate &chk_dim_msk)
 | 
			
		||||
{
 | 
			
		||||
  int nd=rdim.size();
 | 
			
		||||
  Coordinate coor(nd);
 | 
			
		||||
 | 
			
		||||
  Lexicographic::CoorFromIndex(coor,oindex,rdim);
 | 
			
		||||
 | 
			
		||||
  int linear=0;
 | 
			
		||||
  for(int d=0;d<nd;d++){
 | 
			
		||||
    if(chk_dim_msk[d])
 | 
			
		||||
      linear=linear+coor[d];
 | 
			
		||||
  }
 | 
			
		||||
  return (linear&0x1);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
    
 | 
			
		||||
// Specialise this for red black grids storing half the data like a chess board.
 | 
			
		||||
class GridRedBlackCartesian : public GridBase
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  Coordinate _checker_dim_mask;
 | 
			
		||||
  //  Coordinate _checker_dim_mask;
 | 
			
		||||
  int              _checker_dim;
 | 
			
		||||
  std::vector<int> _checker_board;
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -114,6 +114,7 @@ public:
 | 
			
		||||
  void GlobalSumVector(RealD *,int N);
 | 
			
		||||
  void GlobalSum(uint32_t &);
 | 
			
		||||
  void GlobalSum(uint64_t &);
 | 
			
		||||
  void GlobalSumVector(uint64_t*,int N);
 | 
			
		||||
  void GlobalSum(ComplexF &c);
 | 
			
		||||
  void GlobalSumVector(ComplexF *c,int N);
 | 
			
		||||
  void GlobalSum(ComplexD &c);
 | 
			
		||||
@@ -137,21 +138,6 @@ public:
 | 
			
		||||
		      int recv_from_rank,
 | 
			
		||||
		      int bytes);
 | 
			
		||||
  
 | 
			
		||||
  void SendRecvPacket(void *xmit,
 | 
			
		||||
		      void *recv,
 | 
			
		||||
		      int xmit_to_rank,
 | 
			
		||||
		      int recv_from_rank,
 | 
			
		||||
		      int bytes);
 | 
			
		||||
  
 | 
			
		||||
  void SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 | 
			
		||||
			   void *xmit,
 | 
			
		||||
			   int xmit_to_rank,
 | 
			
		||||
			   void *recv,
 | 
			
		||||
			   int recv_from_rank,
 | 
			
		||||
			   int bytes);
 | 
			
		||||
  
 | 
			
		||||
  void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall);
 | 
			
		||||
 | 
			
		||||
  double StencilSendToRecvFrom(void *xmit,
 | 
			
		||||
			       int xmit_to_rank,
 | 
			
		||||
			       void *recv,
 | 
			
		||||
 
 | 
			
		||||
@@ -1,6 +1,6 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/communicator/Communicator_mpi.cc
 | 
			
		||||
 | 
			
		||||
@@ -35,7 +35,7 @@ Grid_MPI_Comm       CartesianCommunicator::communicator_world;
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
// First initialise of comms system
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
void CartesianCommunicator::Init(int *argc, char ***argv) 
 | 
			
		||||
void CartesianCommunicator::Init(int *argc, char ***argv)
 | 
			
		||||
{
 | 
			
		||||
 | 
			
		||||
  int flag;
 | 
			
		||||
@@ -43,8 +43,16 @@ void CartesianCommunicator::Init(int *argc, char ***argv)
 | 
			
		||||
 | 
			
		||||
  MPI_Initialized(&flag); // needed to coexist with other libs apparently
 | 
			
		||||
  if ( !flag ) {
 | 
			
		||||
    MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided);
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_COMMS_THREADS
 | 
			
		||||
    nCommThreads=1;
 | 
			
		||||
    // wrong results here too
 | 
			
		||||
    // For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs
 | 
			
		||||
    // other comms schemes are ok
 | 
			
		||||
    MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided);
 | 
			
		||||
#else
 | 
			
		||||
    MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided);
 | 
			
		||||
#endif
 | 
			
		||||
    //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE
 | 
			
		||||
    if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) {
 | 
			
		||||
      assert(0);
 | 
			
		||||
@@ -91,7 +99,7 @@ void  CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor)
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Initialises from communicator_world
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) 
 | 
			
		||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
 | 
			
		||||
{
 | 
			
		||||
  MPI_Comm optimal_comm;
 | 
			
		||||
  ////////////////////////////////////////////////////
 | 
			
		||||
@@ -110,7 +118,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
 | 
			
		||||
//////////////////////////////////
 | 
			
		||||
// Try to subdivide communicator
 | 
			
		||||
//////////////////////////////////
 | 
			
		||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)    
 | 
			
		||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)
 | 
			
		||||
{
 | 
			
		||||
  _ndimension = processors.size();  assert(_ndimension>=1);
 | 
			
		||||
  int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension);
 | 
			
		||||
@@ -127,7 +135,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // split the communicator
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  //  int Nparent = parent._processors ; 
 | 
			
		||||
  //  int Nparent = parent._processors ;
 | 
			
		||||
  int Nparent;
 | 
			
		||||
  MPI_Comm_size(parent.communicator,&Nparent);
 | 
			
		||||
 | 
			
		||||
@@ -149,13 +157,13 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // rank within subcomm ; srank is rank of subcomm within blocks of subcomms
 | 
			
		||||
  int crank;  
 | 
			
		||||
  int crank;
 | 
			
		||||
  // Mpi uses the reverse Lexico convention to us; so reversed routines called
 | 
			
		||||
  Lexicographic::IndexFromCoorReversed(ccoor,crank,processors); // processors is the split grid dimensions
 | 
			
		||||
  Lexicographic::IndexFromCoorReversed(scoor,srank,ssize);      // ssize is the number of split grids
 | 
			
		||||
 | 
			
		||||
  MPI_Comm comm_split;
 | 
			
		||||
  if ( Nchild > 1 ) { 
 | 
			
		||||
  if ( Nchild > 1 ) {
 | 
			
		||||
 | 
			
		||||
    ////////////////////////////////////////////////////////////////
 | 
			
		||||
    // Split the communicator
 | 
			
		||||
@@ -180,11 +188,11 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
 | 
			
		||||
  SetCommunicator(comm_split);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////
 | 
			
		||||
  // Free the temp communicator 
 | 
			
		||||
  // Free the temp communicator
 | 
			
		||||
  ///////////////////////////////////////////////
 | 
			
		||||
  MPI_Comm_free(&comm_split);
 | 
			
		||||
 | 
			
		||||
  if(0){ 
 | 
			
		||||
  if(0){
 | 
			
		||||
    std::cout << " ndim " <<_ndimension<<" " << parent._ndimension << std::endl;
 | 
			
		||||
    for(int d=0;d<processors.size();d++){
 | 
			
		||||
      std::cout << d<< " " << _processor_coor[d] <<" " <<  ccoor[d]<<std::endl;
 | 
			
		||||
@@ -245,7 +253,7 @@ CartesianCommunicator::~CartesianCommunicator()
 | 
			
		||||
    for(int i=0;i<communicator_halo.size();i++){
 | 
			
		||||
      MPI_Comm_free(&communicator_halo[i]);
 | 
			
		||||
    }
 | 
			
		||||
  }  
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::GlobalSum(uint32_t &u){
 | 
			
		||||
  int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_SUM,communicator);
 | 
			
		||||
@@ -255,6 +263,10 @@ void CartesianCommunicator::GlobalSum(uint64_t &u){
 | 
			
		||||
  int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator);
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){
 | 
			
		||||
  int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator);
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::GlobalXOR(uint32_t &u){
 | 
			
		||||
  int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator);
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
@@ -290,60 +302,28 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
 | 
			
		||||
					   int bytes)
 | 
			
		||||
{
 | 
			
		||||
  std::vector<CommsRequest_t> reqs(0);
 | 
			
		||||
  //    unsigned long  xcrc = crc32(0L, Z_NULL, 0);
 | 
			
		||||
  //    unsigned long  rcrc = crc32(0L, Z_NULL, 0);
 | 
			
		||||
  //    xcrc = crc32(xcrc,(unsigned char *)xmit,bytes);
 | 
			
		||||
  SendToRecvFromBegin(reqs,xmit,dest,recv,from,bytes);
 | 
			
		||||
  SendToRecvFromComplete(reqs);
 | 
			
		||||
  //    rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
 | 
			
		||||
  //    printf("proc %d SendToRecvFrom %d bytes %lx %lx\n",_processor,bytes,xcrc,rcrc);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::SendRecvPacket(void *xmit,
 | 
			
		||||
					   void *recv,
 | 
			
		||||
					   int sender,
 | 
			
		||||
					   int receiver,
 | 
			
		||||
					   int bytes)
 | 
			
		||||
{
 | 
			
		||||
  MPI_Status stat;
 | 
			
		||||
  assert(sender != receiver);
 | 
			
		||||
  int tag = sender;
 | 
			
		||||
  if ( _processor == sender ) {
 | 
			
		||||
    MPI_Send(xmit, bytes, MPI_CHAR,receiver,tag,communicator);
 | 
			
		||||
  }
 | 
			
		||||
  if ( _processor == receiver ) { 
 | 
			
		||||
    MPI_Recv(recv, bytes, MPI_CHAR,sender,tag,communicator,&stat);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
// Basic Halo comms primitive
 | 
			
		||||
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 | 
			
		||||
						void *xmit,
 | 
			
		||||
						int dest,
 | 
			
		||||
						void *recv,
 | 
			
		||||
						int from,
 | 
			
		||||
						int bytes)
 | 
			
		||||
{
 | 
			
		||||
  unsigned long  xcrc = crc32(0L, Z_NULL, 0);
 | 
			
		||||
  unsigned long  rcrc = crc32(0L, Z_NULL, 0);
 | 
			
		||||
 | 
			
		||||
  int myrank = _processor;
 | 
			
		||||
  int ierr;
 | 
			
		||||
 | 
			
		||||
  if ( CommunicatorPolicy == CommunicatorPolicyConcurrent ) { 
 | 
			
		||||
    MPI_Request xrq;
 | 
			
		||||
    MPI_Request rrq;
 | 
			
		||||
  // Enforce no UVM in comms, device or host OK
 | 
			
		||||
  assert(acceleratorIsCommunicable(xmit));
 | 
			
		||||
  assert(acceleratorIsCommunicable(recv));
 | 
			
		||||
 | 
			
		||||
    ierr =MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator,&rrq);
 | 
			
		||||
    ierr|=MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator,&xrq);
 | 
			
		||||
    
 | 
			
		||||
    assert(ierr==0);
 | 
			
		||||
    list.push_back(xrq);
 | 
			
		||||
    list.push_back(rrq);
 | 
			
		||||
  } else { 
 | 
			
		||||
    // Give the CPU to MPI immediately; can use threads to overlap optionally
 | 
			
		||||
    ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank,
 | 
			
		||||
		      recv,bytes,MPI_CHAR,from, from,
 | 
			
		||||
		      communicator,MPI_STATUS_IGNORE);
 | 
			
		||||
    assert(ierr==0);
 | 
			
		||||
  }
 | 
			
		||||
  // Give the CPU to MPI immediately; can use threads to overlap optionally
 | 
			
		||||
  //  printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes);
 | 
			
		||||
  ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank,
 | 
			
		||||
		    recv,bytes,MPI_CHAR,from, from,
 | 
			
		||||
		    communicator,MPI_STATUS_IGNORE);
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
 | 
			
		||||
  //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes);
 | 
			
		||||
  //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
 | 
			
		||||
  //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Basic Halo comms primitive
 | 
			
		||||
double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
 | 
			
		||||
						     int dest,
 | 
			
		||||
						     void *recv,
 | 
			
		||||
@@ -363,7 +343,7 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
 | 
			
		||||
							 int from,
 | 
			
		||||
							 int bytes,int dir)
 | 
			
		||||
{
 | 
			
		||||
  int ncomm  =communicator_halo.size(); 
 | 
			
		||||
  int ncomm  =communicator_halo.size();
 | 
			
		||||
  int commdir=dir%ncomm;
 | 
			
		||||
 | 
			
		||||
  MPI_Request xrq;
 | 
			
		||||
@@ -378,36 +358,31 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
 | 
			
		||||
  assert(from != _processor);
 | 
			
		||||
  assert(gme  == ShmRank);
 | 
			
		||||
  double off_node_bytes=0.0;
 | 
			
		||||
  int tag;
 | 
			
		||||
 | 
			
		||||
  if ( gfrom ==MPI_UNDEFINED) {
 | 
			
		||||
    ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator_halo[commdir],&rrq);
 | 
			
		||||
    tag= dir+from*32;
 | 
			
		||||
    ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq);
 | 
			
		||||
    assert(ierr==0);
 | 
			
		||||
    list.push_back(rrq);
 | 
			
		||||
    off_node_bytes+=bytes;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( gdest == MPI_UNDEFINED ) {
 | 
			
		||||
    ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator_halo[commdir],&xrq);
 | 
			
		||||
    tag= dir+_processor*32;
 | 
			
		||||
    ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
 | 
			
		||||
    assert(ierr==0);
 | 
			
		||||
    list.push_back(xrq);
 | 
			
		||||
    off_node_bytes+=bytes;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  if ( CommunicatorPolicy == CommunicatorPolicySequential ) { 
 | 
			
		||||
  if ( CommunicatorPolicy == CommunicatorPolicySequential ) {
 | 
			
		||||
    this->StencilSendToRecvFromComplete(list,dir);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  return off_node_bytes;
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir)
 | 
			
		||||
{
 | 
			
		||||
  SendToRecvFromComplete(waitall);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::StencilBarrier(void)
 | 
			
		||||
{
 | 
			
		||||
  MPI_Barrier  (ShmComm);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
 | 
			
		||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir)
 | 
			
		||||
{
 | 
			
		||||
  int nreq=list.size();
 | 
			
		||||
 | 
			
		||||
@@ -418,6 +393,13 @@ void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
  list.resize(0);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::StencilBarrier(void)
 | 
			
		||||
{
 | 
			
		||||
  MPI_Barrier  (ShmComm);
 | 
			
		||||
}
 | 
			
		||||
//void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
 | 
			
		||||
//{
 | 
			
		||||
//}
 | 
			
		||||
void CartesianCommunicator::Barrier(void)
 | 
			
		||||
{
 | 
			
		||||
  int ierr = MPI_Barrier(communicator);
 | 
			
		||||
@@ -432,8 +414,8 @@ void CartesianCommunicator::Broadcast(int root,void* data, int bytes)
 | 
			
		||||
		     communicator);
 | 
			
		||||
  assert(ierr==0);
 | 
			
		||||
}
 | 
			
		||||
int CartesianCommunicator::RankWorld(void){ 
 | 
			
		||||
  int r; 
 | 
			
		||||
int CartesianCommunicator::RankWorld(void){
 | 
			
		||||
  int r;
 | 
			
		||||
  MPI_Comm_rank(communicator_world,&r);
 | 
			
		||||
  return r;
 | 
			
		||||
}
 | 
			
		||||
@@ -466,7 +448,7 @@ void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t
 | 
			
		||||
  // When 24*4 bytes multiples get 50x 10^9 >>> 2x10^9 Y2K bug.
 | 
			
		||||
  // (Turns up on 32^3 x 64 Gparity too)
 | 
			
		||||
  MPI_Datatype object;
 | 
			
		||||
  int iwords; 
 | 
			
		||||
  int iwords;
 | 
			
		||||
  int ibytes;
 | 
			
		||||
  iwords = words;
 | 
			
		||||
  ibytes = bytes;
 | 
			
		||||
@@ -479,5 +461,3 @@ void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -70,21 +70,13 @@ CartesianCommunicator::~CartesianCommunicator(){}
 | 
			
		||||
void CartesianCommunicator::GlobalSum(float &){}
 | 
			
		||||
void CartesianCommunicator::GlobalSumVector(float *,int N){}
 | 
			
		||||
void CartesianCommunicator::GlobalSum(double &){}
 | 
			
		||||
void CartesianCommunicator::GlobalSumVector(double *,int N){}
 | 
			
		||||
void CartesianCommunicator::GlobalSum(uint32_t &){}
 | 
			
		||||
void CartesianCommunicator::GlobalSum(uint64_t &){}
 | 
			
		||||
void CartesianCommunicator::GlobalSumVector(double *,int N){}
 | 
			
		||||
void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){}
 | 
			
		||||
void CartesianCommunicator::GlobalXOR(uint32_t &){}
 | 
			
		||||
void CartesianCommunicator::GlobalXOR(uint64_t &){}
 | 
			
		||||
 | 
			
		||||
void CartesianCommunicator::SendRecvPacket(void *xmit,
 | 
			
		||||
					   void *recv,
 | 
			
		||||
					   int xmit_to_rank,
 | 
			
		||||
					   int recv_from_rank,
 | 
			
		||||
					   int bytes)
 | 
			
		||||
{
 | 
			
		||||
  assert(0);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
// Basic Halo comms primitive -- should never call in single node
 | 
			
		||||
void CartesianCommunicator::SendToRecvFrom(void *xmit,
 | 
			
		||||
@@ -95,20 +87,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
 | 
			
		||||
{
 | 
			
		||||
  assert(0);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 | 
			
		||||
						void *xmit,
 | 
			
		||||
						int dest,
 | 
			
		||||
						void *recv,
 | 
			
		||||
						int from,
 | 
			
		||||
						int bytes)
 | 
			
		||||
{
 | 
			
		||||
  assert(0);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
 | 
			
		||||
{
 | 
			
		||||
  assert(0);
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  bcopy(in,out,bytes*words);
 | 
			
		||||
@@ -136,10 +114,6 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
 | 
			
		||||
						     int recv_from_rank,
 | 
			
		||||
						     int bytes, int dir)
 | 
			
		||||
{
 | 
			
		||||
  std::vector<CommsRequest_t> list;
 | 
			
		||||
  // Discard the "dir"
 | 
			
		||||
  SendToRecvFromBegin   (list,xmit,xmit_to_rank,recv,recv_from_rank,bytes);
 | 
			
		||||
  SendToRecvFromComplete(list);
 | 
			
		||||
  return 2.0*bytes;
 | 
			
		||||
}
 | 
			
		||||
double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
 | 
			
		||||
@@ -149,13 +123,10 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
 | 
			
		||||
							 int recv_from_rank,
 | 
			
		||||
							 int bytes, int dir)
 | 
			
		||||
{
 | 
			
		||||
  // Discard the "dir"
 | 
			
		||||
  SendToRecvFromBegin(list,xmit,xmit_to_rank,recv,recv_from_rank,bytes);
 | 
			
		||||
  return 2.0*bytes;
 | 
			
		||||
}
 | 
			
		||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir)
 | 
			
		||||
{
 | 
			
		||||
  SendToRecvFromComplete(waitall);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
void CartesianCommunicator::StencilBarrier(void){};
 | 
			
		||||
 
 | 
			
		||||
@@ -74,7 +74,9 @@ void *SharedMemory::ShmBufferMalloc(size_t bytes){
 | 
			
		||||
  if (heap_bytes >= heap_size) {
 | 
			
		||||
    std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl;
 | 
			
		||||
    std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl;
 | 
			
		||||
    std::cout<< " Current value is " << (heap_size/(1024*1024)) <<std::endl;
 | 
			
		||||
    std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl;
 | 
			
		||||
    std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl;
 | 
			
		||||
    std::cout<< " Current heap  is " << (heap_size/(1024*1024)) <<"MB"<<std::endl;
 | 
			
		||||
    assert(heap_bytes<heap_size);
 | 
			
		||||
  }
 | 
			
		||||
  //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl;
 | 
			
		||||
 
 | 
			
		||||
@@ -102,7 +102,7 @@ public:
 | 
			
		||||
  ///////////////////////////////////////////////////
 | 
			
		||||
  static void SharedMemoryAllocate(uint64_t bytes, int flags);
 | 
			
		||||
  static void SharedMemoryFree(void);
 | 
			
		||||
  static void SharedMemoryCopy(void *dest,const void *src,size_t bytes);
 | 
			
		||||
  static void SharedMemoryCopy(void *dest,void *src,size_t bytes);
 | 
			
		||||
  static void SharedMemoryZero(void *dest,size_t bytes);
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
 
 | 
			
		||||
@@ -29,9 +29,12 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
#include <pwd.h>
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
#include <cuda_runtime_api.h>
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
#include <hip/hip_runtime_api.h>
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid); 
 | 
			
		||||
#define header "SharedMemoryMpi: "
 | 
			
		||||
@@ -47,7 +50,12 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm)
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Split into groups that can share memory
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////
 | 
			
		||||
#ifndef GRID_MPI3_SHM_NONE
 | 
			
		||||
  MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm);
 | 
			
		||||
#else
 | 
			
		||||
  MPI_Comm_split(comm, WorldRank, 0, &WorldShmComm);
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
  MPI_Comm_rank(WorldShmComm     ,&WorldShmRank);
 | 
			
		||||
  MPI_Comm_size(WorldShmComm     ,&WorldShmSize);
 | 
			
		||||
 | 
			
		||||
@@ -170,17 +178,24 @@ void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmD
 | 
			
		||||
  std::vector<int> primes({2,3,5});
 | 
			
		||||
 | 
			
		||||
  int dim = 0;
 | 
			
		||||
  int last_dim = ndimension - 1;
 | 
			
		||||
  int AutoShmSize = 1;
 | 
			
		||||
  while(AutoShmSize != WorldShmSize) {
 | 
			
		||||
    for(int p=0;p<primes.size();p++) {
 | 
			
		||||
    int p;
 | 
			
		||||
    for(p=0;p<primes.size();p++) {
 | 
			
		||||
      int prime=primes[p];
 | 
			
		||||
      if ( divides(prime,WorldDims[dim]/ShmDims[dim])
 | 
			
		||||
        && divides(prime,WorldShmSize/AutoShmSize)  ) {
 | 
			
		||||
	AutoShmSize*=prime;
 | 
			
		||||
	ShmDims[dim]*=prime;
 | 
			
		||||
	last_dim = dim;
 | 
			
		||||
	break;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
    if (p == primes.size() && last_dim == dim) {
 | 
			
		||||
      std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl;
 | 
			
		||||
      exit(EXIT_FAILURE);
 | 
			
		||||
    }
 | 
			
		||||
    dim=(dim+1) %ndimension;
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
@@ -413,7 +428,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Hugetlbfs mapping intended
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#if defined(GRID_CUDA) ||defined(GRID_HIP)
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
{
 | 
			
		||||
  void * ShmCommBuf ; 
 | 
			
		||||
@@ -433,27 +448,19 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  //  cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2);
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_IBM_SUMMIT
 | 
			
		||||
  // IBM Jsrun makes cuda Device numbering screwy and not match rank
 | 
			
		||||
    std::cout << "IBM Summit or similar - NOT setting device to WorldShmRank"<<std::endl;
 | 
			
		||||
#else
 | 
			
		||||
    std::cout << "setting device to WorldShmRank"<<std::endl;
 | 
			
		||||
    cudaSetDevice(WorldShmRank);
 | 
			
		||||
#endif
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Each MPI rank should allocate our own buffer
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  auto err =  cudaMalloc(&ShmCommBuf, bytes);
 | 
			
		||||
  if ( err !=  cudaSuccess) {
 | 
			
		||||
    std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl;
 | 
			
		||||
    exit(EXIT_FAILURE);  
 | 
			
		||||
  }
 | 
			
		||||
  ShmCommBuf = acceleratorAllocDevice(bytes);
 | 
			
		||||
 | 
			
		||||
  if (ShmCommBuf == (void *)NULL ) {
 | 
			
		||||
    std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed NULL pointer for " << bytes<<" bytes " << std::endl;
 | 
			
		||||
    std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl;
 | 
			
		||||
    exit(EXIT_FAILURE);  
 | 
			
		||||
  }
 | 
			
		||||
  if ( WorldRank == 0 ){
 | 
			
		||||
    std::cout << header " SharedMemoryMPI.cc cudaMalloc "<< bytes << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
 | 
			
		||||
  //  if ( WorldRank == 0 ){
 | 
			
		||||
  if ( 1 ){
 | 
			
		||||
    std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes 
 | 
			
		||||
	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
 | 
			
		||||
  }
 | 
			
		||||
  SharedMemoryZero(ShmCommBuf,bytes);
 | 
			
		||||
 | 
			
		||||
@@ -461,19 +468,31 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
  // Loop over ranks/gpu's on our node
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  for(int r=0;r<WorldShmSize;r++){
 | 
			
		||||
    
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_MPI3_SHM_NONE
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
    // If it is me, pass around the IPC access key
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
    cudaIpcMemHandle_t handle;
 | 
			
		||||
    
 | 
			
		||||
    if ( r==WorldShmRank ) { 
 | 
			
		||||
      err = cudaIpcGetMemHandle(&handle,ShmCommBuf);
 | 
			
		||||
      auto err = cudaIpcGetMemHandle(&handle,ShmCommBuf);
 | 
			
		||||
      if ( err !=  cudaSuccess) {
 | 
			
		||||
	std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl;
 | 
			
		||||
	exit(EXIT_FAILURE);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
    hipIpcMemHandle_t handle;    
 | 
			
		||||
    if ( r==WorldShmRank ) { 
 | 
			
		||||
      auto err = hipIpcGetMemHandle(&handle,ShmCommBuf);
 | 
			
		||||
      if ( err !=  hipSuccess) {
 | 
			
		||||
	std::cerr << " SharedMemoryMPI.cc hipIpcGetMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl;
 | 
			
		||||
	exit(EXIT_FAILURE);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
#endif
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
    // Share this IPC handle across the Shm Comm
 | 
			
		||||
    //////////////////////////////////////////////////
 | 
			
		||||
@@ -490,17 +509,31 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
    // If I am not the source, overwrite thisBuf with remote buffer
 | 
			
		||||
    ///////////////////////////////////////////////////////////////
 | 
			
		||||
    void * thisBuf = ShmCommBuf;
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
    if ( r!=WorldShmRank ) { 
 | 
			
		||||
      err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess);
 | 
			
		||||
      auto err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess);
 | 
			
		||||
      if ( err !=  cudaSuccess) {
 | 
			
		||||
	std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl;
 | 
			
		||||
	exit(EXIT_FAILURE);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
    if ( r!=WorldShmRank ) { 
 | 
			
		||||
      auto err = hipIpcOpenMemHandle(&thisBuf,handle,hipIpcMemLazyEnablePeerAccess);
 | 
			
		||||
      if ( err !=  hipSuccess) {
 | 
			
		||||
	std::cerr << " SharedMemoryMPI.cc hipIpcOpenMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl;
 | 
			
		||||
	exit(EXIT_FAILURE);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
#endif
 | 
			
		||||
    ///////////////////////////////////////////////////////////////
 | 
			
		||||
    // Save a copy of the device buffers
 | 
			
		||||
    ///////////////////////////////////////////////////////////////
 | 
			
		||||
    WorldShmCommBufs[r] = thisBuf;
 | 
			
		||||
#else
 | 
			
		||||
    WorldShmCommBufs[r] = ShmCommBuf;
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  _ShmAllocBytes=bytes;
 | 
			
		||||
@@ -633,7 +666,6 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
#endif
 | 
			
		||||
      void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0);
 | 
			
		||||
      
 | 
			
		||||
      //      std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< size<< "bytes)"<<std::endl;
 | 
			
		||||
      if ( ptr == (void * )MAP_FAILED ) {       
 | 
			
		||||
	perror("failed mmap");     
 | 
			
		||||
	assert(0);    
 | 
			
		||||
@@ -677,15 +709,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
  cudaMemset(dest,0,bytes);
 | 
			
		||||
#else
 | 
			
		||||
  bzero(dest,bytes);
 | 
			
		||||
#endif
 | 
			
		||||
}
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,const void *src,size_t bytes)
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
  cudaMemcpy(dest,src,bytes,cudaMemcpyDefault);
 | 
			
		||||
#else   
 | 
			
		||||
  bcopy(src,dest,bytes);
 | 
			
		||||
@@ -705,7 +737,11 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Split into groups that can share memory
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////
 | 
			
		||||
#ifndef GRID_MPI3_SHM_NONE
 | 
			
		||||
  MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm);
 | 
			
		||||
#else
 | 
			
		||||
  MPI_Comm_split(comm, rank, 0, &ShmComm);
 | 
			
		||||
#endif
 | 
			
		||||
  MPI_Comm_rank(ShmComm     ,&ShmRank);
 | 
			
		||||
  MPI_Comm_size(ShmComm     ,&ShmSize);
 | 
			
		||||
  ShmCommBufs.resize(ShmSize);
 | 
			
		||||
@@ -735,19 +771,12 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
 | 
			
		||||
  std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r;
 | 
			
		||||
  MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]); 
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_IBM_SUMMIT
 | 
			
		||||
  // Hide the shared memory path between sockets 
 | 
			
		||||
  // if even number of nodes
 | 
			
		||||
  if ( (ShmSize & 0x1)==0 ) {
 | 
			
		||||
    int SocketSize = ShmSize/2;
 | 
			
		||||
    int mySocket = ShmRank/SocketSize; 
 | 
			
		||||
#ifdef GRID_SHM_FORCE_MPI
 | 
			
		||||
  // Hide the shared memory path between ranks
 | 
			
		||||
  {
 | 
			
		||||
    for(int r=0;r<size;r++){
 | 
			
		||||
      int hisRank=ShmRanks[r];
 | 
			
		||||
      if ( hisRank!= MPI_UNDEFINED ) {
 | 
			
		||||
	int hisSocket=hisRank/SocketSize;
 | 
			
		||||
	if ( hisSocket != mySocket ) {
 | 
			
		||||
	  ShmRanks[r] = MPI_UNDEFINED;
 | 
			
		||||
	}
 | 
			
		||||
      if ( r!=rank ) {
 | 
			
		||||
	ShmRanks[r] = MPI_UNDEFINED;
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 
 | 
			
		||||
@@ -29,6 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid); 
 | 
			
		||||
#define header "SharedMemoryNone: "
 | 
			
		||||
 | 
			
		||||
/*Construct from an MPI communicator*/
 | 
			
		||||
void GlobalSharedMemory::Init(Grid_MPI_Comm comm)
 | 
			
		||||
@@ -55,6 +56,38 @@ void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_M
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Hugetlbfs mapping intended, use anonymous mmap
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
#if 1
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
{
 | 
			
		||||
  std::cout << header "SharedMemoryAllocate "<< bytes<< " GPU implementation "<<std::endl;
 | 
			
		||||
  void * ShmCommBuf ; 
 | 
			
		||||
  assert(_ShmSetup==1);
 | 
			
		||||
  assert(_ShmAlloc==0);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Each MPI rank should allocate our own buffer
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  ShmCommBuf = acceleratorAllocDevice(bytes);
 | 
			
		||||
 | 
			
		||||
  if (ShmCommBuf == (void *)NULL ) {
 | 
			
		||||
    std::cerr << " SharedMemoryNone.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl;
 | 
			
		||||
    exit(EXIT_FAILURE);  
 | 
			
		||||
  }
 | 
			
		||||
  if ( WorldRank == 0 ){
 | 
			
		||||
    std::cout << WorldRank << header " SharedMemoryNone.cc acceleratorAllocDevice "<< bytes 
 | 
			
		||||
	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
 | 
			
		||||
  }
 | 
			
		||||
  SharedMemoryZero(ShmCommBuf,bytes);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Loop over ranks/gpu's on our node
 | 
			
		||||
  ///////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  WorldShmCommBufs[0] = ShmCommBuf;
 | 
			
		||||
 | 
			
		||||
  _ShmAllocBytes=bytes;
 | 
			
		||||
  _ShmAlloc=1;
 | 
			
		||||
}
 | 
			
		||||
#else
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
{
 | 
			
		||||
  void * ShmCommBuf ; 
 | 
			
		||||
@@ -83,7 +116,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
 | 
			
		||||
  _ShmAllocBytes=bytes;
 | 
			
		||||
  _ShmAlloc=1;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  acceleratorMemSet(dest,0,bytes);
 | 
			
		||||
}
 | 
			
		||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
 | 
			
		||||
{
 | 
			
		||||
  acceleratorCopyToDevice(src,dest,bytes);
 | 
			
		||||
}
 | 
			
		||||
////////////////////////////////////////////////////////
 | 
			
		||||
// Global shared functionality finished
 | 
			
		||||
// Now move to per communicator functionality
 | 
			
		||||
 
 | 
			
		||||
@@ -49,4 +49,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#ifdef GRID_COMMS_SHMEM
 | 
			
		||||
#include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator
 | 
			
		||||
#endif 
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
auto Cshift(const Expression &expr,int dim,int shift)  -> decltype(closure(expr)) 
 | 
			
		||||
{
 | 
			
		||||
  return Cshift(closure(expr),dim,shift);
 | 
			
		||||
}
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 
 | 
			
		||||
@@ -29,11 +29,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
extern Vector<std::pair<int,int> > Cshift_table; 
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
// Gather for when there is no need to SIMD split 
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj> void 
 | 
			
		||||
Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
 | 
			
		||||
Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
 | 
			
		||||
{
 | 
			
		||||
  int rd = rhs.Grid()->_rdimensions[dimension];
 | 
			
		||||
 | 
			
		||||
@@ -46,16 +48,16 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  int ent = 0;
 | 
			
		||||
 | 
			
		||||
  static Vector<std::pair<int,int> > table; table.resize(e1*e2);
 | 
			
		||||
  if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
 | 
			
		||||
 | 
			
		||||
  int stride=rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  if ( cbmask == 0x3 ) { 
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
	int o  = n*stride;
 | 
			
		||||
	int bo = n*e2;
 | 
			
		||||
	table[ent++] = std::pair<int,int>(off+bo+b,so+o+b);
 | 
			
		||||
	Cshift_table[ent++] = std::pair<int,int>(off+bo+b,so+o+b);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  } else { 
 | 
			
		||||
@@ -65,14 +67,26 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen
 | 
			
		||||
	 int o  = n*stride;
 | 
			
		||||
	 int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);
 | 
			
		||||
	 if ( ocb &cbmask ) {
 | 
			
		||||
	   table[ent++]=std::pair<int,int> (off+bo++,so+o+b);
 | 
			
		||||
	   Cshift_table[ent++]=std::pair<int,int> (off+bo++,so+o+b);
 | 
			
		||||
	 }
 | 
			
		||||
       }
 | 
			
		||||
     }
 | 
			
		||||
  }
 | 
			
		||||
  thread_for(i,ent,{
 | 
			
		||||
    buffer[table[i].first]=rhs_v[table[i].second];
 | 
			
		||||
  });
 | 
			
		||||
  {
 | 
			
		||||
    auto buffer_p = & buffer[0];
 | 
			
		||||
    auto table = &Cshift_table[0];
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView(rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
    accelerator_for(i,ent,vobj::Nsimd(),{
 | 
			
		||||
	coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second]));
 | 
			
		||||
    });
 | 
			
		||||
#else
 | 
			
		||||
    autoView(rhs_v , rhs, CpuRead);
 | 
			
		||||
    thread_for(i,ent,{
 | 
			
		||||
      buffer_p[table[i].first]=rhs_v[table[i].second];
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -95,43 +109,76 @@ Gather_plane_extract(const Lattice<vobj> &rhs,
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  int n1=rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  if ( cbmask ==0x3){
 | 
			
		||||
    thread_for_collapse(2,n,e1,{
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView(rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
    accelerator_for2d(n,e1,b,e2,1,{
 | 
			
		||||
	int o      =   n*n1;
 | 
			
		||||
	int offset = b+n*e2;
 | 
			
		||||
	
 | 
			
		||||
	vobj temp =rhs_v[so+o+b];
 | 
			
		||||
	extract<vobj>(temp,pointers,offset);
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
      });
 | 
			
		||||
#else
 | 
			
		||||
    autoView(rhs_v , rhs, CpuRead);
 | 
			
		||||
    thread_for2d(n,e1,b,e2,{
 | 
			
		||||
	int o      =   n*n1;
 | 
			
		||||
	int offset = b+n*e2;
 | 
			
		||||
	
 | 
			
		||||
	vobj temp =rhs_v[so+o+b];
 | 
			
		||||
	extract<vobj>(temp,pointers,offset);
 | 
			
		||||
      });
 | 
			
		||||
#endif
 | 
			
		||||
  } else { 
 | 
			
		||||
    Coordinate rdim=rhs.Grid()->_rdimensions;
 | 
			
		||||
    Coordinate cdm =rhs.Grid()->_checker_dim_mask;
 | 
			
		||||
    std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb?
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView(rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
    accelerator_for2d(n,e1,b,e2,1,{
 | 
			
		||||
 | 
			
		||||
    // Case of SIMD split AND checker dim cannot currently be hit, except in 
 | 
			
		||||
    // Test_cshift_red_black code.
 | 
			
		||||
    std::cout << " Dense packed buffer WARNING " <<std::endl;
 | 
			
		||||
    thread_for_collapse(2,n,e1,{
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
	Coordinate coor;
 | 
			
		||||
 | 
			
		||||
	int o=n*n1;
 | 
			
		||||
	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);
 | 
			
		||||
	int oindex = o+b;
 | 
			
		||||
 | 
			
		||||
       	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm);
 | 
			
		||||
 | 
			
		||||
	int ocb=1<<cb;
 | 
			
		||||
	int offset = b+n*e2;
 | 
			
		||||
 | 
			
		||||
	if ( ocb & cbmask ) {
 | 
			
		||||
	  vobj temp =rhs_v[so+o+b];
 | 
			
		||||
	  extract<vobj>(temp,pointers,offset);
 | 
			
		||||
	}
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
      });
 | 
			
		||||
#else
 | 
			
		||||
    autoView(rhs_v , rhs, CpuRead);
 | 
			
		||||
    thread_for2d(n,e1,b,e2,{
 | 
			
		||||
 | 
			
		||||
	Coordinate coor;
 | 
			
		||||
 | 
			
		||||
	int o=n*n1;
 | 
			
		||||
	int oindex = o+b;
 | 
			
		||||
 | 
			
		||||
       	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm);
 | 
			
		||||
 | 
			
		||||
	int ocb=1<<cb;
 | 
			
		||||
	int offset = b+n*e2;
 | 
			
		||||
 | 
			
		||||
	if ( ocb & cbmask ) {
 | 
			
		||||
	  vobj temp =rhs_v[so+o+b];
 | 
			
		||||
	  extract<vobj>(temp,pointers,offset);
 | 
			
		||||
	}
 | 
			
		||||
      });
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
// Scatter for when there is no need to SIMD split
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vobj> &buffer, int dimension,int plane,int cbmask)
 | 
			
		||||
template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask)
 | 
			
		||||
{
 | 
			
		||||
  int rd = rhs.Grid()->_rdimensions[dimension];
 | 
			
		||||
 | 
			
		||||
@@ -145,7 +192,8 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  int stride=rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
 | 
			
		||||
  static std::vector<std::pair<int,int> > table; table.resize(e1*e2);
 | 
			
		||||
  if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
 | 
			
		||||
 | 
			
		||||
  int ent    =0;
 | 
			
		||||
 | 
			
		||||
  if ( cbmask ==0x3 ) {
 | 
			
		||||
@@ -154,7 +202,7 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
	int o   =n*rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
	int bo  =n*rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
	table[ent++] = std::pair<int,int>(so+o+b,bo+b);
 | 
			
		||||
	Cshift_table[ent++] = std::pair<int,int>(so+o+b,bo+b);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
@@ -165,16 +213,27 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
 | 
			
		||||
	int o   =n*rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup
 | 
			
		||||
	if ( ocb & cbmask ) {
 | 
			
		||||
	  table[ent++]=std::pair<int,int> (so+o+b,bo++);
 | 
			
		||||
	  Cshift_table[ent++]=std::pair<int,int> (so+o+b,bo++);
 | 
			
		||||
	}
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  thread_for(i,ent,{
 | 
			
		||||
    rhs_v[table[i].first]=buffer[table[i].second];
 | 
			
		||||
  });
 | 
			
		||||
  {
 | 
			
		||||
    auto buffer_p = & buffer[0];
 | 
			
		||||
    auto table = &Cshift_table[0];
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView( rhs_v, rhs, AcceleratorWrite);
 | 
			
		||||
    accelerator_for(i,ent,vobj::Nsimd(),{
 | 
			
		||||
	coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second]));
 | 
			
		||||
    });
 | 
			
		||||
#else
 | 
			
		||||
    autoView( rhs_v, rhs, CpuWrite);
 | 
			
		||||
    thread_for(i,ent,{
 | 
			
		||||
      rhs_v[table[i].first]=buffer_p[table[i].second];
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
@@ -194,21 +253,31 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
 | 
			
		||||
  if(cbmask ==0x3 ) {
 | 
			
		||||
    auto rhs_v = rhs.View();
 | 
			
		||||
    thread_for_collapse(2,n,e1,{
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
	int o      = n*rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
	int offset = b+n*rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
    int _slice_stride = rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
    int _slice_block = rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView( rhs_v , rhs, AcceleratorWrite);
 | 
			
		||||
    accelerator_for2d(n,e1,b,e2,1,{
 | 
			
		||||
	int o      = n*_slice_stride;
 | 
			
		||||
	int offset = b+n*_slice_block;
 | 
			
		||||
	merge(rhs_v[so+o+b],pointers,offset);
 | 
			
		||||
      });
 | 
			
		||||
#else
 | 
			
		||||
    autoView( rhs_v , rhs, CpuWrite);
 | 
			
		||||
    thread_for2d(n,e1,b,e2,{
 | 
			
		||||
	int o      = n*_slice_stride;
 | 
			
		||||
	int offset = b+n*_slice_block;
 | 
			
		||||
	merge(rhs_v[so+o+b],pointers,offset);
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
  } else { 
 | 
			
		||||
 | 
			
		||||
    // Case of SIMD split AND checker dim cannot currently be hit, except in 
 | 
			
		||||
    // Test_cshift_red_black code.
 | 
			
		||||
    //    std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME
 | 
			
		||||
    std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl;
 | 
			
		||||
    auto rhs_v = rhs.View();
 | 
			
		||||
    assert(0); // This will fail if hit on GPU
 | 
			
		||||
    autoView( rhs_v, rhs, CpuWrite);
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
	int o      = n*rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
@@ -225,6 +294,7 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
// local to node block strided copies
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask)
 | 
			
		||||
{
 | 
			
		||||
  int rd = rhs.Grid()->_rdimensions[dimension];
 | 
			
		||||
@@ -239,14 +309,16 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs
 | 
			
		||||
  int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  int stride = rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
  static std::vector<std::pair<int,int> > table; table.resize(e1*e2);
 | 
			
		||||
 | 
			
		||||
  if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
 | 
			
		||||
 | 
			
		||||
  int ent=0;
 | 
			
		||||
 | 
			
		||||
  if(cbmask == 0x3 ){
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
        int o =n*stride+b;
 | 
			
		||||
	table[ent++] = std::pair<int,int>(lo+o,ro+o);
 | 
			
		||||
	Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o);
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  } else { 
 | 
			
		||||
@@ -255,23 +327,32 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs
 | 
			
		||||
        int o =n*stride+b;
 | 
			
		||||
        int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o);
 | 
			
		||||
        if ( ocb&cbmask ) {
 | 
			
		||||
	  table[ent++] = std::pair<int,int>(lo+o,ro+o);
 | 
			
		||||
	  Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o);
 | 
			
		||||
	}
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for(i,ent,{
 | 
			
		||||
    lhs_v[table[i].first]=rhs_v[table[i].second];
 | 
			
		||||
  });
 | 
			
		||||
 | 
			
		||||
  {
 | 
			
		||||
    auto table = &Cshift_table[0];
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView(rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
    autoView(lhs_v , lhs, AcceleratorWrite);
 | 
			
		||||
    accelerator_for(i,ent,vobj::Nsimd(),{
 | 
			
		||||
      coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second]));
 | 
			
		||||
    });
 | 
			
		||||
#else
 | 
			
		||||
    autoView(rhs_v , rhs, CpuRead);
 | 
			
		||||
    autoView(lhs_v , lhs, CpuWrite);
 | 
			
		||||
    thread_for(i,ent,{
 | 
			
		||||
      lhs_v[table[i].first]=rhs_v[table[i].second];
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type)
 | 
			
		||||
{
 | 
			
		||||
 
 | 
			
		||||
  int rd = rhs.Grid()->_rdimensions[dimension];
 | 
			
		||||
 | 
			
		||||
  if ( !rhs.Grid()->CheckerBoarded(dimension) ) {
 | 
			
		||||
@@ -285,29 +366,41 @@ template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vo
 | 
			
		||||
  int e2=rhs.Grid()->_slice_block [dimension];
 | 
			
		||||
  int stride = rhs.Grid()->_slice_stride[dimension];
 | 
			
		||||
 | 
			
		||||
  static std::vector<std::pair<int,int> > table;  table.resize(e1*e2);
 | 
			
		||||
  if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
 | 
			
		||||
 | 
			
		||||
  int ent=0;
 | 
			
		||||
 | 
			
		||||
  if ( cbmask == 0x3 ) {
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
    for(int b=0;b<e2;b++){
 | 
			
		||||
      int o  =n*stride;
 | 
			
		||||
      table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
 | 
			
		||||
      Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
 | 
			
		||||
    }}
 | 
			
		||||
  } else {
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
    for(int b=0;b<e2;b++){
 | 
			
		||||
      int o  =n*stride;
 | 
			
		||||
      int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b);
 | 
			
		||||
      if ( ocb&cbmask ) table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
 | 
			
		||||
      if ( ocb&cbmask ) Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
 | 
			
		||||
    }}
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for(i,ent,{
 | 
			
		||||
    permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
 | 
			
		||||
  });
 | 
			
		||||
  {
 | 
			
		||||
    auto table = &Cshift_table[0];
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT    
 | 
			
		||||
    autoView( rhs_v, rhs, AcceleratorRead);
 | 
			
		||||
    autoView( lhs_v, lhs, AcceleratorWrite);
 | 
			
		||||
    accelerator_for(i,ent,1,{
 | 
			
		||||
      permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
 | 
			
		||||
    });
 | 
			
		||||
#else
 | 
			
		||||
    autoView( rhs_v, rhs, CpuRead);
 | 
			
		||||
    autoView( lhs_v, lhs, CpuWrite);
 | 
			
		||||
    thread_for(i,ent,{
 | 
			
		||||
      permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
 | 
			
		||||
    });
 | 
			
		||||
#endif
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////
 | 
			
		||||
 
 | 
			
		||||
@@ -101,7 +101,8 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob
 | 
			
		||||
    Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
#define ACCELERATOR_CSHIFT_NO_COPY
 | 
			
		||||
#ifdef ACCELERATOR_CSHIFT_NO_COPY
 | 
			
		||||
template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
 | 
			
		||||
{
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
@@ -121,9 +122,9 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
 | 
			
		||||
  assert(shift<fd);
 | 
			
		||||
  
 | 
			
		||||
  int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  commVector<vobj> send_buf(buffer_size);
 | 
			
		||||
  commVector<vobj> recv_buf(buffer_size);
 | 
			
		||||
 | 
			
		||||
  cshiftVector<vobj> send_buf(buffer_size);
 | 
			
		||||
  cshiftVector<vobj> recv_buf(buffer_size);
 | 
			
		||||
    
 | 
			
		||||
  int cb= (cbmask==0x2)? Odd : Even;
 | 
			
		||||
  int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
 | 
			
		||||
 | 
			
		||||
@@ -138,7 +139,7 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
 | 
			
		||||
 | 
			
		||||
    } else {
 | 
			
		||||
 | 
			
		||||
      int words = send_buf.size();
 | 
			
		||||
      int words = buffer_size;
 | 
			
		||||
      if (cbmask != 0x3) words=words>>1;
 | 
			
		||||
 | 
			
		||||
      int bytes = words * sizeof(vobj);
 | 
			
		||||
@@ -150,12 +151,14 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
 | 
			
		||||
      int xmit_to_rank;
 | 
			
		||||
      grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
 | 
			
		||||
 | 
			
		||||
      grid->Barrier();
 | 
			
		||||
 | 
			
		||||
      grid->SendToRecvFrom((void *)&send_buf[0],
 | 
			
		||||
			   xmit_to_rank,
 | 
			
		||||
			   (void *)&recv_buf[0],
 | 
			
		||||
			   recv_from_rank,
 | 
			
		||||
			   bytes);
 | 
			
		||||
 | 
			
		||||
      grid->Barrier();
 | 
			
		||||
 | 
			
		||||
      Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask);
 | 
			
		||||
@@ -195,8 +198,15 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
 | 
			
		||||
  int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
 | 
			
		||||
  //  int words = sizeof(vobj)/sizeof(vector_type);
 | 
			
		||||
 | 
			
		||||
  std::vector<commVector<scalar_object> >   send_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) );
 | 
			
		||||
  std::vector<commVector<scalar_object> >   recv_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) );
 | 
			
		||||
  std::vector<cshiftVector<scalar_object> >  send_buf_extract(Nsimd);
 | 
			
		||||
  std::vector<cshiftVector<scalar_object> >  recv_buf_extract(Nsimd);
 | 
			
		||||
  scalar_object *  recv_buf_extract_mpi;
 | 
			
		||||
  scalar_object *  send_buf_extract_mpi;
 | 
			
		||||
 
 | 
			
		||||
  for(int s=0;s<Nsimd;s++){
 | 
			
		||||
    send_buf_extract[s].resize(buffer_size);
 | 
			
		||||
    recv_buf_extract[s].resize(buffer_size);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  int bytes = buffer_size*sizeof(scalar_object);
 | 
			
		||||
 | 
			
		||||
@@ -242,11 +252,204 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
 | 
			
		||||
      if(nbr_proc){
 | 
			
		||||
	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank); 
 | 
			
		||||
 | 
			
		||||
	grid->SendToRecvFrom((void *)&send_buf_extract[nbr_lane][0],
 | 
			
		||||
	grid->Barrier();
 | 
			
		||||
 | 
			
		||||
	send_buf_extract_mpi = &send_buf_extract[nbr_lane][0];
 | 
			
		||||
	recv_buf_extract_mpi = &recv_buf_extract[i][0];
 | 
			
		||||
	grid->SendToRecvFrom((void *)send_buf_extract_mpi,
 | 
			
		||||
			     xmit_to_rank,
 | 
			
		||||
			     (void *)&recv_buf_extract[i][0],
 | 
			
		||||
			     (void *)recv_buf_extract_mpi,
 | 
			
		||||
			     recv_from_rank,
 | 
			
		||||
			     bytes);
 | 
			
		||||
 | 
			
		||||
	grid->Barrier();
 | 
			
		||||
 | 
			
		||||
	rpointers[i] = &recv_buf_extract[i][0];
 | 
			
		||||
      } else { 
 | 
			
		||||
	rpointers[i] = &send_buf_extract[nbr_lane][0];
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
    }
 | 
			
		||||
    Scatter_plane_merge(ret,rpointers,dimension,x,cbmask);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
#else 
 | 
			
		||||
template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
 | 
			
		||||
{
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
 | 
			
		||||
  GridBase *grid=rhs.Grid();
 | 
			
		||||
  Lattice<vobj> temp(rhs.Grid());
 | 
			
		||||
 | 
			
		||||
  int fd              = rhs.Grid()->_fdimensions[dimension];
 | 
			
		||||
  int rd              = rhs.Grid()->_rdimensions[dimension];
 | 
			
		||||
  int pd              = rhs.Grid()->_processors[dimension];
 | 
			
		||||
  int simd_layout     = rhs.Grid()->_simd_layout[dimension];
 | 
			
		||||
  int comm_dim        = rhs.Grid()->_processors[dimension] >1 ;
 | 
			
		||||
  assert(simd_layout==1);
 | 
			
		||||
  assert(comm_dim==1);
 | 
			
		||||
  assert(shift>=0);
 | 
			
		||||
  assert(shift<fd);
 | 
			
		||||
  
 | 
			
		||||
  int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
 | 
			
		||||
  cshiftVector<vobj> send_buf_v(buffer_size);
 | 
			
		||||
  cshiftVector<vobj> recv_buf_v(buffer_size);
 | 
			
		||||
  vobj *send_buf;
 | 
			
		||||
  vobj *recv_buf;
 | 
			
		||||
  {
 | 
			
		||||
    grid->ShmBufferFreeAll();
 | 
			
		||||
    size_t bytes = buffer_size*sizeof(vobj);
 | 
			
		||||
    send_buf=(vobj *)grid->ShmBufferMalloc(bytes);
 | 
			
		||||
    recv_buf=(vobj *)grid->ShmBufferMalloc(bytes);
 | 
			
		||||
  }
 | 
			
		||||
    
 | 
			
		||||
  int cb= (cbmask==0x2)? Odd : Even;
 | 
			
		||||
  int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
 | 
			
		||||
 | 
			
		||||
  for(int x=0;x<rd;x++){       
 | 
			
		||||
 | 
			
		||||
    int sx        =  (x+sshift)%rd;
 | 
			
		||||
    int comm_proc = ((x+sshift)/rd)%pd;
 | 
			
		||||
    
 | 
			
		||||
    if (comm_proc==0) {
 | 
			
		||||
 | 
			
		||||
      Copy_plane(ret,rhs,dimension,x,sx,cbmask); 
 | 
			
		||||
 | 
			
		||||
    } else {
 | 
			
		||||
 | 
			
		||||
      int words = buffer_size;
 | 
			
		||||
      if (cbmask != 0x3) words=words>>1;
 | 
			
		||||
 | 
			
		||||
      int bytes = words * sizeof(vobj);
 | 
			
		||||
 | 
			
		||||
      Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask);
 | 
			
		||||
 | 
			
		||||
      //      int rank           = grid->_processor;
 | 
			
		||||
      int recv_from_rank;
 | 
			
		||||
      int xmit_to_rank;
 | 
			
		||||
      grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
      grid->Barrier();
 | 
			
		||||
 | 
			
		||||
      acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes);
 | 
			
		||||
      grid->SendToRecvFrom((void *)&send_buf[0],
 | 
			
		||||
			   xmit_to_rank,
 | 
			
		||||
			   (void *)&recv_buf[0],
 | 
			
		||||
			   recv_from_rank,
 | 
			
		||||
			   bytes);
 | 
			
		||||
      acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes);
 | 
			
		||||
 | 
			
		||||
      grid->Barrier();
 | 
			
		||||
 | 
			
		||||
      Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask);
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
 | 
			
		||||
{
 | 
			
		||||
  GridBase *grid=rhs.Grid();
 | 
			
		||||
  const int Nsimd = grid->Nsimd();
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
  typedef typename vobj::scalar_object scalar_object;
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
   
 | 
			
		||||
  int fd = grid->_fdimensions[dimension];
 | 
			
		||||
  int rd = grid->_rdimensions[dimension];
 | 
			
		||||
  int ld = grid->_ldimensions[dimension];
 | 
			
		||||
  int pd = grid->_processors[dimension];
 | 
			
		||||
  int simd_layout     = grid->_simd_layout[dimension];
 | 
			
		||||
  int comm_dim        = grid->_processors[dimension] >1 ;
 | 
			
		||||
 | 
			
		||||
  //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd
 | 
			
		||||
  //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout 
 | 
			
		||||
  //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl;
 | 
			
		||||
 | 
			
		||||
  assert(comm_dim==1);
 | 
			
		||||
  assert(simd_layout==2);
 | 
			
		||||
  assert(shift>=0);
 | 
			
		||||
  assert(shift<fd);
 | 
			
		||||
 | 
			
		||||
  int permute_type=grid->PermuteType(dimension);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////
 | 
			
		||||
  // Simd direction uses an extract/merge pair
 | 
			
		||||
  ///////////////////////////////////////////////
 | 
			
		||||
  int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
 | 
			
		||||
  //  int words = sizeof(vobj)/sizeof(vector_type);
 | 
			
		||||
 | 
			
		||||
  std::vector<cshiftVector<scalar_object> >  send_buf_extract(Nsimd);
 | 
			
		||||
  std::vector<cshiftVector<scalar_object> >  recv_buf_extract(Nsimd);
 | 
			
		||||
  scalar_object *  recv_buf_extract_mpi;
 | 
			
		||||
  scalar_object *  send_buf_extract_mpi;
 | 
			
		||||
  {
 | 
			
		||||
    size_t bytes = sizeof(scalar_object)*buffer_size;
 | 
			
		||||
    grid->ShmBufferFreeAll();
 | 
			
		||||
    send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
 | 
			
		||||
    recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
 | 
			
		||||
  }
 | 
			
		||||
  for(int s=0;s<Nsimd;s++){
 | 
			
		||||
    send_buf_extract[s].resize(buffer_size);
 | 
			
		||||
    recv_buf_extract[s].resize(buffer_size);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  int bytes = buffer_size*sizeof(scalar_object);
 | 
			
		||||
 | 
			
		||||
  ExtractPointerArray<scalar_object>  pointers(Nsimd); // 
 | 
			
		||||
  ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
  // Work out what to send where
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
  int cb    = (cbmask==0x2)? Odd : Even;
 | 
			
		||||
  int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
 | 
			
		||||
 | 
			
		||||
  // loop over outer coord planes orthog to dim
 | 
			
		||||
  for(int x=0;x<rd;x++){       
 | 
			
		||||
 | 
			
		||||
    // FIXME call local permute copy if none are offnode.
 | 
			
		||||
    for(int i=0;i<Nsimd;i++){       
 | 
			
		||||
      pointers[i] = &send_buf_extract[i][0];
 | 
			
		||||
    }
 | 
			
		||||
    int sx   = (x+sshift)%rd;
 | 
			
		||||
    Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
 | 
			
		||||
 | 
			
		||||
    for(int i=0;i<Nsimd;i++){
 | 
			
		||||
      
 | 
			
		||||
      int inner_bit = (Nsimd>>(permute_type+1));
 | 
			
		||||
      int ic= (i&inner_bit)? 1:0;
 | 
			
		||||
 | 
			
		||||
      int my_coor          = rd*ic + x;
 | 
			
		||||
      int nbr_coor         = my_coor+sshift;
 | 
			
		||||
      int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors
 | 
			
		||||
 | 
			
		||||
      int nbr_ic   = (nbr_coor%ld)/rd;    // inner coord of peer
 | 
			
		||||
      int nbr_ox   = (nbr_coor%rd);       // outer coord of peer
 | 
			
		||||
      int nbr_lane = (i&(~inner_bit));
 | 
			
		||||
 | 
			
		||||
      int recv_from_rank;
 | 
			
		||||
      int xmit_to_rank;
 | 
			
		||||
 | 
			
		||||
      if (nbr_ic) nbr_lane|=inner_bit;
 | 
			
		||||
 | 
			
		||||
      assert (sx == nbr_ox);
 | 
			
		||||
 | 
			
		||||
      if(nbr_proc){
 | 
			
		||||
	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank); 
 | 
			
		||||
 | 
			
		||||
	grid->Barrier();
 | 
			
		||||
 | 
			
		||||
	acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes);
 | 
			
		||||
	grid->SendToRecvFrom((void *)send_buf_extract_mpi,
 | 
			
		||||
			     xmit_to_rank,
 | 
			
		||||
			     (void *)recv_buf_extract_mpi,
 | 
			
		||||
			     recv_from_rank,
 | 
			
		||||
			     bytes);
 | 
			
		||||
	acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes);
 | 
			
		||||
 | 
			
		||||
	grid->Barrier();
 | 
			
		||||
	rpointers[i] = &recv_buf_extract[i][0];
 | 
			
		||||
      } else { 
 | 
			
		||||
@@ -258,7 +461,7 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
NAMESPACE_END(Grid); 
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,4 @@
 | 
			
		||||
#include <Grid/GridCore.h>       
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
Vector<std::pair<int,int> > Cshift_table; 
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
@@ -26,6 +26,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
    *************************************************************************************/
 | 
			
		||||
    /*  END LEGAL */
 | 
			
		||||
#pragma once
 | 
			
		||||
#include <Grid/lattice/Lattice_view.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_base.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_conformable.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_ET.h>
 | 
			
		||||
@@ -36,6 +37,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/lattice/Lattice_reduction.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_peekpoke.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_reality.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_real_imag.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_comparison_utils.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_comparison.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_coordinate.h>
 | 
			
		||||
@@ -43,4 +45,4 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/lattice/Lattice_rng.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_unary.h>
 | 
			
		||||
#include <Grid/lattice/Lattice_transfer.h>
 | 
			
		||||
 | 
			
		||||
#include <Grid/lattice/Lattice_basis.h>
 | 
			
		||||
 
 | 
			
		||||
@@ -9,6 +9,7 @@ Copyright (C) 2015
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: neo <cossu@post.kek.jp>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
@@ -41,9 +42,24 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
////////////////////////////////////////////////////
 | 
			
		||||
// Predicated where support
 | 
			
		||||
////////////////////////////////////////////////////
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
// drop to scalar in SIMT; cleaner in fact
 | 
			
		||||
template <class iobj, class vobj, class robj>
 | 
			
		||||
accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue,
 | 
			
		||||
                            const robj &iffalse) {
 | 
			
		||||
accelerator_inline vobj predicatedWhere(const iobj &predicate, 
 | 
			
		||||
					const vobj &iftrue, 
 | 
			
		||||
					const robj &iffalse) 
 | 
			
		||||
{
 | 
			
		||||
  Integer mask = TensorRemove(predicate);
 | 
			
		||||
  typename std::remove_const<vobj>::type ret= iffalse;
 | 
			
		||||
  if (mask) ret=iftrue;
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
#else
 | 
			
		||||
template <class iobj, class vobj, class robj>
 | 
			
		||||
accelerator_inline vobj predicatedWhere(const iobj &predicate, 
 | 
			
		||||
					const vobj &iftrue, 
 | 
			
		||||
					const robj &iffalse) 
 | 
			
		||||
{
 | 
			
		||||
  typename std::remove_const<vobj>::type ret;
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::scalar_object scalar_object;
 | 
			
		||||
@@ -67,6 +83,7 @@ accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftru
 | 
			
		||||
  merge(ret, falsevals);
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////
 | 
			
		||||
//Specialization of getVectorType for lattices
 | 
			
		||||
@@ -80,26 +97,62 @@ struct getVectorType<Lattice<T> >{
 | 
			
		||||
//--  recursive evaluation of expressions; --
 | 
			
		||||
// handle leaves of syntax tree
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
template<class sobj> accelerator_inline 
 | 
			
		||||
template<class sobj,
 | 
			
		||||
  typename std::enable_if<!is_lattice<sobj>::value&&!is_lattice_expr<sobj>::value,sobj>::type * = nullptr> 
 | 
			
		||||
accelerator_inline 
 | 
			
		||||
sobj eval(const uint64_t ss, const sobj &arg)
 | 
			
		||||
{
 | 
			
		||||
  return arg;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template <class lobj> accelerator_inline 
 | 
			
		||||
const lobj & eval(const uint64_t ss, const LatticeView<lobj> &arg) 
 | 
			
		||||
auto eval(const uint64_t ss, const LatticeView<lobj> &arg) -> decltype(arg(ss))
 | 
			
		||||
{
 | 
			
		||||
  return arg[ss];
 | 
			
		||||
  return arg(ss);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
//--  recursive evaluation of expressions; --
 | 
			
		||||
// whole vector return, used only for expression return type inference
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
template<class sobj> accelerator_inline 
 | 
			
		||||
sobj vecEval(const uint64_t ss, const sobj &arg)
 | 
			
		||||
{
 | 
			
		||||
  return arg;
 | 
			
		||||
}
 | 
			
		||||
template <class lobj> accelerator_inline 
 | 
			
		||||
const lobj & eval(const uint64_t ss, const Lattice<lobj> &arg) 
 | 
			
		||||
const lobj & vecEval(const uint64_t ss, const LatticeView<lobj> &arg) 
 | 
			
		||||
{
 | 
			
		||||
  auto view = arg.View();
 | 
			
		||||
  return view[ss];
 | 
			
		||||
  return arg[ss];
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
// handle nodes in syntax tree- eval one operand
 | 
			
		||||
// vecEval needed (but never called as all expressions offloaded) to infer the return type
 | 
			
		||||
// in SIMT contexts of closure.
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
template <typename Op, typename T1> accelerator_inline 
 | 
			
		||||
auto vecEval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)  
 | 
			
		||||
  -> decltype(expr.op.func( vecEval(ss, expr.arg1)))
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func( vecEval(ss, expr.arg1) );
 | 
			
		||||
}
 | 
			
		||||
// vecEval two operands
 | 
			
		||||
template <typename Op, typename T1, typename T2> accelerator_inline
 | 
			
		||||
auto vecEval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)  
 | 
			
		||||
  -> decltype(expr.op.func( vecEval(ss,expr.arg1),vecEval(ss,expr.arg2)))
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func( vecEval(ss,expr.arg1), vecEval(ss,expr.arg2) );
 | 
			
		||||
}
 | 
			
		||||
// vecEval three operands
 | 
			
		||||
template <typename Op, typename T1, typename T2, typename T3> accelerator_inline
 | 
			
		||||
auto vecEval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  
 | 
			
		||||
  -> decltype(expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3)))
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3));
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
// handle nodes in syntax tree- eval one operand coalesced
 | 
			
		||||
///////////////////////////////////////////////////
 | 
			
		||||
template <typename Op, typename T1> accelerator_inline 
 | 
			
		||||
auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)  
 | 
			
		||||
@@ -107,23 +160,41 @@ auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func( eval(ss, expr.arg1) );
 | 
			
		||||
}
 | 
			
		||||
///////////////////////
 | 
			
		||||
// eval two operands
 | 
			
		||||
///////////////////////
 | 
			
		||||
template <typename Op, typename T1, typename T2> accelerator_inline
 | 
			
		||||
auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)  
 | 
			
		||||
  -> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2)))
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) );
 | 
			
		||||
}
 | 
			
		||||
///////////////////////
 | 
			
		||||
// eval three operands
 | 
			
		||||
///////////////////////
 | 
			
		||||
template <typename Op, typename T1, typename T2, typename T3> accelerator_inline
 | 
			
		||||
auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  
 | 
			
		||||
  -> decltype(expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3)))
 | 
			
		||||
  -> decltype(expr.op.func(eval(ss, expr.arg1), 
 | 
			
		||||
			   eval(ss, expr.arg2), 
 | 
			
		||||
			   eval(ss, expr.arg3)))
 | 
			
		||||
{
 | 
			
		||||
  return expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3));
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
  // Handles Nsimd (vInteger) != Nsimd(ComplexD)
 | 
			
		||||
  typedef decltype(vecEval(ss, expr.arg2)) rvobj;
 | 
			
		||||
  typedef typename std::remove_reference<rvobj>::type vobj;
 | 
			
		||||
 | 
			
		||||
  const int Nsimd = vobj::vector_type::Nsimd();
 | 
			
		||||
 | 
			
		||||
  auto vpred = vecEval(ss,expr.arg1);
 | 
			
		||||
 | 
			
		||||
  ExtractBuffer<Integer> mask(Nsimd);
 | 
			
		||||
  extract<vInteger, Integer>(TensorRemove(vpred), mask);
 | 
			
		||||
 | 
			
		||||
  int s = acceleratorSIMTlane(Nsimd);
 | 
			
		||||
  return expr.op.func(mask[s],
 | 
			
		||||
		      eval(ss, expr.arg2), 
 | 
			
		||||
		      eval(ss, expr.arg3));
 | 
			
		||||
#else
 | 
			
		||||
  return expr.op.func(eval(ss, expr.arg1),
 | 
			
		||||
		      eval(ss, expr.arg2), 
 | 
			
		||||
		      eval(ss, expr.arg3));
 | 
			
		||||
#endif
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -179,16 +250,12 @@ inline void CBFromExpression(int &cb, const T1 &lat)  // Lattice leaf
 | 
			
		||||
  cb = lat.Checkerboard();
 | 
			
		||||
}
 | 
			
		||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
 | 
			
		||||
inline void CBFromExpression(int &cb, const T1 ¬lat)  // non-lattice leaf
 | 
			
		||||
{
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
inline void CBFromExpression(int &cb, const T1 ¬lat) {} // non-lattice leaf
 | 
			
		||||
template <typename Op, typename T1> inline 
 | 
			
		||||
void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr) 
 | 
			
		||||
{
 | 
			
		||||
  CBFromExpression(cb, expr.arg1);  // recurse AST
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename T1, typename T2> inline 
 | 
			
		||||
void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr) 
 | 
			
		||||
{
 | 
			
		||||
@@ -203,32 +270,86 @@ inline void CBFromExpression(int &cb, const LatticeTrinaryExpression<Op, T1, T2,
 | 
			
		||||
  CBFromExpression(cb, expr.arg3);  // recurse AST
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// ViewOpen
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr>
 | 
			
		||||
inline void ExpressionViewOpen(T1 &lat)  // Lattice leaf
 | 
			
		||||
{
 | 
			
		||||
  lat.ViewOpen(AcceleratorRead);
 | 
			
		||||
}
 | 
			
		||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
 | 
			
		||||
  inline void ExpressionViewOpen(T1 ¬lat) {}
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename T1> inline 
 | 
			
		||||
void ExpressionViewOpen(LatticeUnaryExpression<Op, T1> &expr) 
 | 
			
		||||
{  
 | 
			
		||||
  ExpressionViewOpen(expr.arg1); // recurse AST
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename T1, typename T2> inline 
 | 
			
		||||
void ExpressionViewOpen(LatticeBinaryExpression<Op, T1, T2> &expr) 
 | 
			
		||||
{
 | 
			
		||||
  ExpressionViewOpen(expr.arg1);  // recurse AST
 | 
			
		||||
  ExpressionViewOpen(expr.arg2);  // rrecurse AST
 | 
			
		||||
}
 | 
			
		||||
template <typename Op, typename T1, typename T2, typename T3>
 | 
			
		||||
inline void ExpressionViewOpen(LatticeTrinaryExpression<Op, T1, T2, T3> &expr) 
 | 
			
		||||
{
 | 
			
		||||
  ExpressionViewOpen(expr.arg1);  // recurse AST
 | 
			
		||||
  ExpressionViewOpen(expr.arg2);  // recurse AST
 | 
			
		||||
  ExpressionViewOpen(expr.arg3);  // recurse AST
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// ViewClose
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr>
 | 
			
		||||
inline void ExpressionViewClose( T1 &lat)  // Lattice leaf
 | 
			
		||||
{
 | 
			
		||||
  lat.ViewClose();
 | 
			
		||||
}
 | 
			
		||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
 | 
			
		||||
inline void ExpressionViewClose(T1 ¬lat) {}
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename T1> inline 
 | 
			
		||||
void ExpressionViewClose(LatticeUnaryExpression<Op, T1> &expr) 
 | 
			
		||||
{  
 | 
			
		||||
  ExpressionViewClose(expr.arg1); // recurse AST
 | 
			
		||||
}
 | 
			
		||||
template <typename Op, typename T1, typename T2> inline 
 | 
			
		||||
void ExpressionViewClose(LatticeBinaryExpression<Op, T1, T2> &expr) 
 | 
			
		||||
{
 | 
			
		||||
  ExpressionViewClose(expr.arg1);  // recurse AST
 | 
			
		||||
  ExpressionViewClose(expr.arg2);  // recurse AST
 | 
			
		||||
}
 | 
			
		||||
template <typename Op, typename T1, typename T2, typename T3>
 | 
			
		||||
inline void ExpressionViewClose(LatticeTrinaryExpression<Op, T1, T2, T3> &expr) 
 | 
			
		||||
{
 | 
			
		||||
  ExpressionViewClose(expr.arg1);  // recurse AST
 | 
			
		||||
  ExpressionViewClose(expr.arg2);  // recurse AST
 | 
			
		||||
  ExpressionViewClose(expr.arg3);  // recurse AST
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
// Unary operators and funcs
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
#define GridUnopClass(name, ret)					\
 | 
			
		||||
  template <class arg>							\
 | 
			
		||||
  struct name {								\
 | 
			
		||||
    static auto accelerator_inline func(const arg a) -> decltype(ret) { return ret; } \
 | 
			
		||||
    template<class _arg> static auto accelerator_inline func(const _arg a) -> decltype(ret) { return ret; } \
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
GridUnopClass(UnarySub, -a);
 | 
			
		||||
GridUnopClass(UnaryNot, Not(a));
 | 
			
		||||
GridUnopClass(UnaryAdj, adj(a));
 | 
			
		||||
GridUnopClass(UnaryConj, conjugate(a));
 | 
			
		||||
GridUnopClass(UnaryTrace, trace(a));
 | 
			
		||||
GridUnopClass(UnaryTranspose, transpose(a));
 | 
			
		||||
GridUnopClass(UnaryTa, Ta(a));
 | 
			
		||||
GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a));
 | 
			
		||||
GridUnopClass(UnaryReal, real(a));
 | 
			
		||||
GridUnopClass(UnaryImag, imag(a));
 | 
			
		||||
GridUnopClass(UnaryToReal, toReal(a));
 | 
			
		||||
GridUnopClass(UnaryToComplex, toComplex(a));
 | 
			
		||||
GridUnopClass(UnaryTimesI, timesI(a));
 | 
			
		||||
GridUnopClass(UnaryTimesMinusI, timesMinusI(a));
 | 
			
		||||
GridUnopClass(UnaryAbs, abs(a));
 | 
			
		||||
GridUnopClass(UnarySqrt, sqrt(a));
 | 
			
		||||
GridUnopClass(UnaryRsqrt, rsqrt(a));
 | 
			
		||||
GridUnopClass(UnarySin, sin(a));
 | 
			
		||||
GridUnopClass(UnaryCos, cos(a));
 | 
			
		||||
GridUnopClass(UnaryAsin, asin(a));
 | 
			
		||||
@@ -240,10 +361,10 @@ GridUnopClass(UnaryExp, exp(a));
 | 
			
		||||
// Binary operators
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
#define GridBinOpClass(name, combination)			\
 | 
			
		||||
  template <class left, class right>				\
 | 
			
		||||
  struct name {							\
 | 
			
		||||
    template <class _left, class _right>			\
 | 
			
		||||
    static auto accelerator_inline				\
 | 
			
		||||
    func(const left &lhs, const right &rhs)			\
 | 
			
		||||
    func(const _left &lhs, const _right &rhs)			\
 | 
			
		||||
      -> decltype(combination) const				\
 | 
			
		||||
    {								\
 | 
			
		||||
      return combination;					\
 | 
			
		||||
@@ -263,10 +384,10 @@ GridBinOpClass(BinaryOrOr, lhs || rhs);
 | 
			
		||||
// Trinary conditional op
 | 
			
		||||
////////////////////////////////////////////////////
 | 
			
		||||
#define GridTrinOpClass(name, combination)				\
 | 
			
		||||
  template <class predicate, class left, class right>			\
 | 
			
		||||
  struct name {								\
 | 
			
		||||
    template <class _predicate,class _left, class _right>		\
 | 
			
		||||
    static auto accelerator_inline					\
 | 
			
		||||
    func(const predicate &pred, const left &lhs, const right &rhs)	\
 | 
			
		||||
    func(const _predicate &pred, const _left &lhs, const _right &rhs)	\
 | 
			
		||||
      -> decltype(combination) const					\
 | 
			
		||||
    {									\
 | 
			
		||||
      return combination;						\
 | 
			
		||||
@@ -274,17 +395,17 @@ GridBinOpClass(BinaryOrOr, lhs || rhs);
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
GridTrinOpClass(TrinaryWhere,
 | 
			
		||||
		(predicatedWhere<predicate, 
 | 
			
		||||
		 typename std::remove_reference<left>::type,
 | 
			
		||||
		 typename std::remove_reference<right>::type>(pred, lhs,rhs)));
 | 
			
		||||
		(predicatedWhere<
 | 
			
		||||
		 typename std::remove_reference<_predicate>::type, 
 | 
			
		||||
		 typename std::remove_reference<_left>::type,
 | 
			
		||||
		 typename std::remove_reference<_right>::type>(pred, lhs,rhs)));
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
// Operator syntactical glue
 | 
			
		||||
////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
#define GRID_UNOP(name)   name<decltype(eval(0, arg))>
 | 
			
		||||
#define GRID_BINOP(name)  name<decltype(eval(0, lhs)), decltype(eval(0, rhs))>
 | 
			
		||||
#define GRID_TRINOP(name) name<decltype(eval(0, pred)), decltype(eval(0, lhs)), decltype(eval(0, rhs))>
 | 
			
		||||
#define GRID_UNOP(name)   name
 | 
			
		||||
#define GRID_BINOP(name)  name
 | 
			
		||||
#define GRID_TRINOP(name) name
 | 
			
		||||
 | 
			
		||||
#define GRID_DEF_UNOP(op, name)						\
 | 
			
		||||
  template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \
 | 
			
		||||
@@ -330,22 +451,17 @@ GridTrinOpClass(TrinaryWhere,
 | 
			
		||||
GRID_DEF_UNOP(operator-, UnarySub);
 | 
			
		||||
GRID_DEF_UNOP(Not, UnaryNot);
 | 
			
		||||
GRID_DEF_UNOP(operator!, UnaryNot);
 | 
			
		||||
GRID_DEF_UNOP(adj, UnaryAdj);
 | 
			
		||||
GRID_DEF_UNOP(conjugate, UnaryConj);
 | 
			
		||||
//GRID_DEF_UNOP(adj, UnaryAdj);
 | 
			
		||||
//GRID_DEF_UNOP(conjugate, UnaryConj);
 | 
			
		||||
GRID_DEF_UNOP(trace, UnaryTrace);
 | 
			
		||||
GRID_DEF_UNOP(transpose, UnaryTranspose);
 | 
			
		||||
GRID_DEF_UNOP(Ta, UnaryTa);
 | 
			
		||||
GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup);
 | 
			
		||||
GRID_DEF_UNOP(real, UnaryReal);
 | 
			
		||||
GRID_DEF_UNOP(imag, UnaryImag);
 | 
			
		||||
GRID_DEF_UNOP(toReal, UnaryToReal);
 | 
			
		||||
GRID_DEF_UNOP(toComplex, UnaryToComplex);
 | 
			
		||||
GRID_DEF_UNOP(timesI, UnaryTimesI);
 | 
			
		||||
GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI);
 | 
			
		||||
GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the
 | 
			
		||||
                               // abs-fabs-dabs-labs thing
 | 
			
		||||
GRID_DEF_UNOP(sqrt, UnarySqrt);
 | 
			
		||||
GRID_DEF_UNOP(rsqrt, UnaryRsqrt);
 | 
			
		||||
GRID_DEF_UNOP(sin, UnarySin);
 | 
			
		||||
GRID_DEF_UNOP(cos, UnaryCos);
 | 
			
		||||
GRID_DEF_UNOP(asin, UnaryAsin);
 | 
			
		||||
@@ -370,29 +486,36 @@ GRID_DEF_TRINOP(where, TrinaryWhere);
 | 
			
		||||
/////////////////////////////////////////////////////////////
 | 
			
		||||
template <class Op, class T1>
 | 
			
		||||
auto closure(const LatticeUnaryExpression<Op, T1> &expr)
 | 
			
		||||
  -> Lattice<decltype(expr.op.func(eval(0, expr.arg1)))> 
 | 
			
		||||
  -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > 
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(expr.op.func(eval(0, expr.arg1)))> ret(expr);
 | 
			
		||||
  Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > ret(expr);
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
template <class Op, class T1, class T2>
 | 
			
		||||
auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr)
 | 
			
		||||
  -> Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))> 
 | 
			
		||||
  -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type >
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))> ret(expr);
 | 
			
		||||
  Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > ret(expr);
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
template <class Op, class T1, class T2, class T3>
 | 
			
		||||
auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
 | 
			
		||||
  -> Lattice<decltype(expr.op.func(eval(0, expr.arg1),
 | 
			
		||||
				   eval(0, expr.arg2),
 | 
			
		||||
				   eval(0, expr.arg3)))> 
 | 
			
		||||
  -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),
 | 
			
		||||
				   vecEval(0, expr.arg2),
 | 
			
		||||
				   vecEval(0, expr.arg3)))>::type >
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(expr.op.func(eval(0, expr.arg1),
 | 
			
		||||
				eval(0, expr.arg2),
 | 
			
		||||
				eval(0, expr.arg3)))>  ret(expr);
 | 
			
		||||
  Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),
 | 
			
		||||
				vecEval(0, expr.arg2),
 | 
			
		||||
			        vecEval(0, expr.arg3)))>::type >  ret(expr);
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
#define EXPRESSION_CLOSURE(function)					\
 | 
			
		||||
  template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> \
 | 
			
		||||
    auto function(Expression &expr) -> decltype(function(closure(expr))) \
 | 
			
		||||
  {									\
 | 
			
		||||
    return function(closure(expr));					\
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
#undef GRID_UNOP
 | 
			
		||||
#undef GRID_BINOP
 | 
			
		||||
 
 | 
			
		||||
@@ -7,6 +7,7 @@
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
@@ -36,9 +37,9 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  conformable(lhs,rhs);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
@@ -55,13 +56,13 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  conformable(lhs,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
    auto rhs_t=rhs_v(ss);
 | 
			
		||||
    auto tmp  =ret_v(ss);
 | 
			
		||||
    mac(&tmp,&lhs_t,&rhs_t);
 | 
			
		||||
    coalescedWrite(ret_v[ss],tmp);
 | 
			
		||||
  });
 | 
			
		||||
@@ -72,9 +73,9 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  conformable(lhs,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
@@ -88,9 +89,9 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  conformable(lhs,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
@@ -107,8 +108,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(lhs,ret);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    mult(&tmp,&lhs_v(ss),&rhs);
 | 
			
		||||
@@ -120,10 +121,10 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(ret,lhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto tmp  =ret_v(ss);
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
    mac(&tmp,&lhs_t,&rhs);
 | 
			
		||||
    coalescedWrite(ret_v[ss],tmp);
 | 
			
		||||
@@ -134,8 +135,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(ret,lhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
@@ -147,8 +148,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  conformable(lhs,ret);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto lhs_t=lhs_v(ss);
 | 
			
		||||
@@ -164,8 +165,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto rhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( rhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto rhs_t=rhs_v(ss);
 | 
			
		||||
@@ -178,10 +179,10 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto rhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( rhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto tmp  =ret_v(ss);
 | 
			
		||||
    auto rhs_t=rhs_v(ss);
 | 
			
		||||
    mac(&tmp,&lhs,&rhs_t);
 | 
			
		||||
    coalescedWrite(ret_v[ss],tmp);
 | 
			
		||||
@@ -192,8 +193,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto rhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( rhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto rhs_t=rhs_v(ss);
 | 
			
		||||
@@ -205,8 +206,8 @@ template<class obj1,class obj2,class obj3> inline
 | 
			
		||||
void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  conformable(ret,rhs);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto rhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( rhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
 | 
			
		||||
    decltype(coalescedRead(obj1())) tmp;
 | 
			
		||||
    auto rhs_t=rhs_v(ss);
 | 
			
		||||
@@ -220,9 +221,9 @@ void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &
 | 
			
		||||
  ret.Checkerboard() = x.Checkerboard();
 | 
			
		||||
  conformable(ret,x);
 | 
			
		||||
  conformable(x,y);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto x_v = x.View();
 | 
			
		||||
  auto y_v = y.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( x_v , x, AcceleratorRead);
 | 
			
		||||
  autoView( y_v , y, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,x_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    auto tmp = a*x_v(ss)+y_v(ss);
 | 
			
		||||
    coalescedWrite(ret_v[ss],tmp);
 | 
			
		||||
@@ -233,9 +234,9 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice
 | 
			
		||||
  ret.Checkerboard() = x.Checkerboard();
 | 
			
		||||
  conformable(ret,x);
 | 
			
		||||
  conformable(x,y);
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto x_v = x.View();
 | 
			
		||||
  auto y_v = y.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( x_v , x, AcceleratorRead);
 | 
			
		||||
  autoView( y_v , y, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,x_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    auto tmp = a*x_v(ss)+b*y_v(ss);
 | 
			
		||||
    coalescedWrite(ret_v[ss],tmp);
 | 
			
		||||
 
 | 
			
		||||
@@ -9,6 +9,7 @@ Copyright (C) 2015
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
@@ -28,6 +29,7 @@ See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
			   /*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#pragma once 
 | 
			
		||||
 | 
			
		||||
#define STREAMING_STORES
 | 
			
		||||
@@ -36,129 +38,6 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
extern int GridCshiftPermuteMap[4][16];
 | 
			
		||||
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
// Base class which can be used by traits to pick up behaviour
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
class LatticeBase {};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Conformable checks; same instance of Grid required
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
void accelerator_inline conformable(GridBase *lhs,GridBase *rhs)
 | 
			
		||||
{
 | 
			
		||||
  assert(lhs == rhs);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Minimal base class containing only data valid to access from accelerator
 | 
			
		||||
// _odata will be a managed pointer in CUDA
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Force access to lattice through a view object.
 | 
			
		||||
// prevents writing of code that will not offload to GPU, but perhaps annoyingly
 | 
			
		||||
// strict since host could could in principle direct access through the lattice object
 | 
			
		||||
// Need to decide programming model.
 | 
			
		||||
#define LATTICE_VIEW_STRICT
 | 
			
		||||
template<class vobj> class LatticeAccelerator : public LatticeBase
 | 
			
		||||
{
 | 
			
		||||
protected:
 | 
			
		||||
  GridBase *_grid;
 | 
			
		||||
  int checkerboard;
 | 
			
		||||
  vobj     *_odata;    // A managed pointer
 | 
			
		||||
  uint64_t _odata_size;    
 | 
			
		||||
public:
 | 
			
		||||
  accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr) { }; 
 | 
			
		||||
  accelerator_inline uint64_t oSites(void) const { return _odata_size; };
 | 
			
		||||
  accelerator_inline int  Checkerboard(void) const { return checkerboard; };
 | 
			
		||||
  accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view
 | 
			
		||||
  accelerator_inline void Conformable(GridBase * &grid) const
 | 
			
		||||
  { 
 | 
			
		||||
    if (grid) conformable(grid, _grid);
 | 
			
		||||
    else      grid = _grid;
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// A View class which provides accessor to the data.
 | 
			
		||||
// This will be safe to call from accelerator_for and is trivially copy constructible
 | 
			
		||||
// The copy constructor for this will need to be used by device lambda functions
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj> 
 | 
			
		||||
class LatticeView : public LatticeAccelerator<vobj>
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
  // Rvalue
 | 
			
		||||
#ifdef __CUDA_ARCH__
 | 
			
		||||
  accelerator_inline const typename vobj::scalar_object operator()(size_t i) const { return coalescedRead(this->_odata[i]); }
 | 
			
		||||
#else 
 | 
			
		||||
  accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; }
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
  accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; };
 | 
			
		||||
  accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; };
 | 
			
		||||
 | 
			
		||||
  accelerator_inline uint64_t begin(void) const { return 0;};
 | 
			
		||||
  accelerator_inline uint64_t end(void)   const { return this->_odata_size; };
 | 
			
		||||
  accelerator_inline uint64_t size(void)  const { return this->_odata_size; };
 | 
			
		||||
 | 
			
		||||
  LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me)
 | 
			
		||||
  {
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Lattice expression types used by ET to assemble the AST
 | 
			
		||||
// 
 | 
			
		||||
// Need to be able to detect code paths according to the whether a lattice object or not
 | 
			
		||||
// so introduce some trait type things
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
class LatticeExpressionBase {};
 | 
			
		||||
 | 
			
		||||
template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>;
 | 
			
		||||
template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >;
 | 
			
		||||
 | 
			
		||||
template<class T, bool isLattice> struct ViewMapBase { typedef T Type; };
 | 
			
		||||
template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; };
 | 
			
		||||
template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >;
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1>                           
 | 
			
		||||
class LatticeUnaryExpression : public  LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {};
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1, typename _T2>              
 | 
			
		||||
class LatticeBinaryExpression : public LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  typedef typename ViewMap<_T2>::Type T2;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  T2 arg2;
 | 
			
		||||
  LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {};
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1, typename _T2, typename _T3> 
 | 
			
		||||
class LatticeTrinaryExpression : public LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  typedef typename ViewMap<_T2>::Type T2;
 | 
			
		||||
  typedef typename ViewMap<_T3>::Type T3;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  T2 arg2;
 | 
			
		||||
  T3 arg3;
 | 
			
		||||
  LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {};
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// The real lattice class, with normal copy and assignment semantics.
 | 
			
		||||
// This contains extra (host resident) grid pointer data that may be accessed by host code
 | 
			
		||||
@@ -194,24 +73,33 @@ private:
 | 
			
		||||
      dealloc();
 | 
			
		||||
      
 | 
			
		||||
      this->_odata_size = size;
 | 
			
		||||
      if ( size ) 
 | 
			
		||||
      if ( size )
 | 
			
		||||
	this->_odata      = alloc.allocate(this->_odata_size);
 | 
			
		||||
      else 
 | 
			
		||||
	this->_odata      = nullptr;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Can use to make accelerator dirty without copy from host ; useful for temporaries "dont care" prev contents
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  void SetViewMode(ViewMode mode) {
 | 
			
		||||
    LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode);
 | 
			
		||||
    accessor.ViewClose();
 | 
			
		||||
  }
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Return a view object that may be dereferenced in site loops.
 | 
			
		||||
  // The view is trivially copy constructible and may be copied to an accelerator device
 | 
			
		||||
  // in device lambdas
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  LatticeView<vobj> View (void) const 
 | 
			
		||||
 | 
			
		||||
  LatticeView<vobj> View (ViewMode mode) const 
 | 
			
		||||
  {
 | 
			
		||||
    LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this));
 | 
			
		||||
    LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode);
 | 
			
		||||
    return accessor;
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  ~Lattice() { 
 | 
			
		||||
    if ( this->_odata_size ) {
 | 
			
		||||
      dealloc();
 | 
			
		||||
@@ -231,12 +119,16 @@ public:
 | 
			
		||||
    CBFromExpression(cb,expr);
 | 
			
		||||
    assert( (cb==Odd) || (cb==Even));
 | 
			
		||||
    this->checkerboard=cb;
 | 
			
		||||
 | 
			
		||||
    auto me  = View();
 | 
			
		||||
    accelerator_for(ss,me.size(),1,{
 | 
			
		||||
      auto tmp = eval(ss,expr);
 | 
			
		||||
      vstream(me[ss],tmp);
 | 
			
		||||
    
 | 
			
		||||
    auto exprCopy = expr;
 | 
			
		||||
    ExpressionViewOpen(exprCopy);
 | 
			
		||||
    auto me  = View(AcceleratorWriteDiscard);
 | 
			
		||||
    accelerator_for(ss,me.size(),vobj::Nsimd(),{
 | 
			
		||||
      auto tmp = eval(ss,exprCopy);
 | 
			
		||||
      coalescedWrite(me[ss],tmp);
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();
 | 
			
		||||
    ExpressionViewClose(exprCopy);
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
  template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr)
 | 
			
		||||
@@ -251,11 +143,15 @@ public:
 | 
			
		||||
    assert( (cb==Odd) || (cb==Even));
 | 
			
		||||
    this->checkerboard=cb;
 | 
			
		||||
 | 
			
		||||
    auto me  = View();
 | 
			
		||||
    accelerator_for(ss,me.size(),1,{
 | 
			
		||||
      auto tmp = eval(ss,expr);
 | 
			
		||||
      vstream(me[ss],tmp);
 | 
			
		||||
    auto exprCopy = expr;
 | 
			
		||||
    ExpressionViewOpen(exprCopy);
 | 
			
		||||
    auto me  = View(AcceleratorWriteDiscard);
 | 
			
		||||
    accelerator_for(ss,me.size(),vobj::Nsimd(),{
 | 
			
		||||
      auto tmp = eval(ss,exprCopy);
 | 
			
		||||
      coalescedWrite(me[ss],tmp);
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();
 | 
			
		||||
    ExpressionViewClose(exprCopy);
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
  template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr)
 | 
			
		||||
@@ -269,11 +165,15 @@ public:
 | 
			
		||||
    CBFromExpression(cb,expr);
 | 
			
		||||
    assert( (cb==Odd) || (cb==Even));
 | 
			
		||||
    this->checkerboard=cb;
 | 
			
		||||
    auto me  = View();
 | 
			
		||||
    accelerator_for(ss,me.size(),1,{
 | 
			
		||||
      auto tmp = eval(ss,expr);
 | 
			
		||||
      vstream(me[ss],tmp);
 | 
			
		||||
    auto exprCopy = expr;
 | 
			
		||||
    ExpressionViewOpen(exprCopy);
 | 
			
		||||
    auto me  = View(AcceleratorWriteDiscard);
 | 
			
		||||
    accelerator_for(ss,me.size(),vobj::Nsimd(),{
 | 
			
		||||
      auto tmp = eval(ss,exprCopy);
 | 
			
		||||
      coalescedWrite(me[ss],tmp);
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();
 | 
			
		||||
    ExpressionViewClose(exprCopy);
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
  //GridFromExpression is tricky to do
 | 
			
		||||
@@ -324,10 +224,11 @@ public:
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){
 | 
			
		||||
    auto me  = View();
 | 
			
		||||
    auto me  = View(CpuWrite);
 | 
			
		||||
    thread_for(ss,me.size(),{
 | 
			
		||||
      me[ss] = r;
 | 
			
		||||
	me[ss]= r;
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
@@ -337,11 +238,12 @@ public:
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
  // user defined constructor
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
  Lattice(GridBase *grid) { 
 | 
			
		||||
  Lattice(GridBase *grid,ViewMode mode=AcceleratorWriteDiscard) { 
 | 
			
		||||
    this->_grid = grid;
 | 
			
		||||
    resize(this->_grid->oSites());
 | 
			
		||||
    assert((((uint64_t)&this->_odata[0])&0xF) ==0);
 | 
			
		||||
    this->checkerboard=0;
 | 
			
		||||
    SetViewMode(mode);
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  //  virtual ~Lattice(void) = default;
 | 
			
		||||
@@ -357,7 +259,6 @@ public:
 | 
			
		||||
  // copy constructor
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
  Lattice(const Lattice& r){ 
 | 
			
		||||
    //    std::cout << "Lattice constructor(const Lattice &) "<<this<<std::endl; 
 | 
			
		||||
    this->_grid = r.Grid();
 | 
			
		||||
    resize(this->_grid->oSites());
 | 
			
		||||
    *this = r;
 | 
			
		||||
@@ -380,11 +281,12 @@ public:
 | 
			
		||||
    typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0;
 | 
			
		||||
    conformable(*this,r);
 | 
			
		||||
    this->checkerboard = r.Checkerboard();
 | 
			
		||||
    auto me =   View();
 | 
			
		||||
    auto him= r.View();
 | 
			
		||||
    auto me =   View(AcceleratorWriteDiscard);
 | 
			
		||||
    auto him= r.View(AcceleratorRead);
 | 
			
		||||
    accelerator_for(ss,me.size(),vobj::Nsimd(),{
 | 
			
		||||
      coalescedWrite(me[ss],him(ss));
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();    him.ViewClose();
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
@@ -394,11 +296,12 @@ public:
 | 
			
		||||
  inline Lattice<vobj> & operator = (const Lattice<vobj> & r){
 | 
			
		||||
    this->checkerboard = r.Checkerboard();
 | 
			
		||||
    conformable(*this,r);
 | 
			
		||||
    auto me =   View();
 | 
			
		||||
    auto him= r.View();
 | 
			
		||||
    auto me =   View(AcceleratorWriteDiscard);
 | 
			
		||||
    auto him= r.View(AcceleratorRead);
 | 
			
		||||
    accelerator_for(ss,me.size(),vobj::Nsimd(),{
 | 
			
		||||
      coalescedWrite(me[ss],him(ss));
 | 
			
		||||
    });
 | 
			
		||||
    me.ViewClose();    him.ViewClose();
 | 
			
		||||
    return *this;
 | 
			
		||||
  }
 | 
			
		||||
  ///////////////////////////////////////////
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,248 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/lattice/Lattice_basis.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
			   /*  END LEGAL */
 | 
			
		||||
 | 
			
		||||
#pragma once
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k) 
 | 
			
		||||
{
 | 
			
		||||
  // If assume basis[j] are already orthonormal,
 | 
			
		||||
  // can take all inner products in parallel saving 2x bandwidth
 | 
			
		||||
  // Save 3x bandwidth on the second line of loop.
 | 
			
		||||
  // perhaps 2.5x speed up.
 | 
			
		||||
  // 2x overall in Multigrid Lanczos  
 | 
			
		||||
  for(int j=0; j<k; ++j){
 | 
			
		||||
    auto ip = innerProduct(basis[j],w);
 | 
			
		||||
    w = w - ip*basis[j];
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class VField, class Matrix>
 | 
			
		||||
void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm) 
 | 
			
		||||
{
 | 
			
		||||
  typedef decltype(basis[0]) Field;
 | 
			
		||||
  typedef decltype(basis[0].View(AcceleratorRead)) View;
 | 
			
		||||
 | 
			
		||||
  Vector<View> basis_v; basis_v.reserve(basis.size());
 | 
			
		||||
  typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj;
 | 
			
		||||
  typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t;
 | 
			
		||||
  GridBase* grid = basis[0].Grid();
 | 
			
		||||
      
 | 
			
		||||
  for(int k=0;k<basis.size();k++){
 | 
			
		||||
    basis_v.push_back(basis[k].View(AcceleratorWrite));
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
#if ( (!defined(GRID_CUDA)) )
 | 
			
		||||
  int max_threads = thread_max();
 | 
			
		||||
  Vector < vobj > Bt(Nm * max_threads);
 | 
			
		||||
  thread_region
 | 
			
		||||
    {
 | 
			
		||||
      vobj* B = &Bt[Nm * thread_num()];
 | 
			
		||||
      thread_for_in_region(ss, grid->oSites(),{
 | 
			
		||||
	  for(int j=j0; j<j1; ++j) B[j]=0.;
 | 
			
		||||
      
 | 
			
		||||
	  for(int j=j0; j<j1; ++j){
 | 
			
		||||
	    for(int k=k0; k<k1; ++k){
 | 
			
		||||
	      B[j] +=Qt(j,k) * basis_v[k][ss];
 | 
			
		||||
	    }
 | 
			
		||||
	  }
 | 
			
		||||
	  for(int j=j0; j<j1; ++j){
 | 
			
		||||
	    basis_v[j][ss] = B[j];
 | 
			
		||||
	  }
 | 
			
		||||
	});
 | 
			
		||||
    }
 | 
			
		||||
#else
 | 
			
		||||
  View *basis_vp = &basis_v[0];
 | 
			
		||||
 | 
			
		||||
  int nrot = j1-j0;
 | 
			
		||||
  if (!nrot) // edge case not handled gracefully by Cuda
 | 
			
		||||
    return;
 | 
			
		||||
 | 
			
		||||
  uint64_t oSites   =grid->oSites();
 | 
			
		||||
  uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead
 | 
			
		||||
 | 
			
		||||
  Vector <vobj> Bt(siteBlock * nrot); 
 | 
			
		||||
  auto Bp=&Bt[0];
 | 
			
		||||
 | 
			
		||||
  // GPU readable copy of matrix
 | 
			
		||||
  Vector<Coeff_t> Qt_jv(Nm*Nm);
 | 
			
		||||
  Coeff_t *Qt_p = & Qt_jv[0];
 | 
			
		||||
  thread_for(i,Nm*Nm,{
 | 
			
		||||
      int j = i/Nm;
 | 
			
		||||
      int k = i%Nm;
 | 
			
		||||
      Qt_p[i]=Qt(j,k);
 | 
			
		||||
  });
 | 
			
		||||
 | 
			
		||||
  // Block the loop to keep storage footprint down
 | 
			
		||||
  for(uint64_t s=0;s<oSites;s+=siteBlock){
 | 
			
		||||
 | 
			
		||||
    // remaining work in this block
 | 
			
		||||
    int ssites=MIN(siteBlock,oSites-s);
 | 
			
		||||
 | 
			
		||||
    // zero out the accumulators
 | 
			
		||||
    accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{
 | 
			
		||||
	decltype(coalescedRead(Bp[ss])) z;
 | 
			
		||||
	z=Zero();
 | 
			
		||||
	coalescedWrite(Bp[ss],z);
 | 
			
		||||
      });
 | 
			
		||||
 | 
			
		||||
    accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
 | 
			
		||||
	
 | 
			
		||||
	int j =sj%nrot;
 | 
			
		||||
	int jj  =j0+j;
 | 
			
		||||
	int ss =sj/nrot;
 | 
			
		||||
	int sss=ss+s;
 | 
			
		||||
 | 
			
		||||
	for(int k=k0; k<k1; ++k){
 | 
			
		||||
	  auto tmp = coalescedRead(Bp[ss*nrot+j]);
 | 
			
		||||
	  coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss]));
 | 
			
		||||
	}
 | 
			
		||||
      });
 | 
			
		||||
 | 
			
		||||
    accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
 | 
			
		||||
	int j =sj%nrot;
 | 
			
		||||
	int jj  =j0+j;
 | 
			
		||||
	int ss =sj/nrot;
 | 
			
		||||
	int sss=ss+s;
 | 
			
		||||
	coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j]));
 | 
			
		||||
      });
 | 
			
		||||
  }
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
  for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// Extract a single rotated vector
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm) 
 | 
			
		||||
{
 | 
			
		||||
  typedef decltype(basis[0].View(AcceleratorRead)) View;
 | 
			
		||||
  typedef typename Field::vector_object vobj;
 | 
			
		||||
  GridBase* grid = basis[0].Grid();
 | 
			
		||||
 | 
			
		||||
  result.Checkerboard() = basis[0].Checkerboard();
 | 
			
		||||
 | 
			
		||||
  Vector<View> basis_v; basis_v.reserve(basis.size());
 | 
			
		||||
  for(int k=0;k<basis.size();k++){
 | 
			
		||||
    basis_v.push_back(basis[k].View(AcceleratorRead));
 | 
			
		||||
  }
 | 
			
		||||
  vobj zz=Zero();
 | 
			
		||||
  Vector<double> Qt_jv(Nm);
 | 
			
		||||
  double * Qt_j = & Qt_jv[0];
 | 
			
		||||
  for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k);
 | 
			
		||||
 | 
			
		||||
  auto basis_vp=& basis_v[0];
 | 
			
		||||
  autoView(result_v,result,AcceleratorWrite);
 | 
			
		||||
  accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{
 | 
			
		||||
    vobj zzz=Zero();
 | 
			
		||||
    auto B=coalescedRead(zzz);
 | 
			
		||||
    for(int k=k0; k<k1; ++k){
 | 
			
		||||
      B +=Qt_j[k] * coalescedRead(basis_vp[k][ss]);
 | 
			
		||||
    }
 | 
			
		||||
    coalescedWrite(result_v[ss], B);
 | 
			
		||||
  });
 | 
			
		||||
  for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx) 
 | 
			
		||||
{
 | 
			
		||||
  int vlen = idx.size();
 | 
			
		||||
 | 
			
		||||
  assert(vlen>=1);
 | 
			
		||||
  assert(vlen<=sort_vals.size());
 | 
			
		||||
  assert(vlen<=_v.size());
 | 
			
		||||
 | 
			
		||||
  for (size_t i=0;i<vlen;i++) {
 | 
			
		||||
 | 
			
		||||
    if (idx[i] != i) {
 | 
			
		||||
 | 
			
		||||
      //////////////////////////////////////
 | 
			
		||||
      // idx[i] is a table of desired sources giving a permutation.
 | 
			
		||||
      // Swap v[i] with v[idx[i]].
 | 
			
		||||
      // Find  j>i for which _vnew[j] = _vold[i],
 | 
			
		||||
      // track the move idx[j] => idx[i]
 | 
			
		||||
      // track the move idx[i] => i
 | 
			
		||||
      //////////////////////////////////////
 | 
			
		||||
      size_t j;
 | 
			
		||||
      for (j=i;j<idx.size();j++)
 | 
			
		||||
	if (idx[j]==i)
 | 
			
		||||
	  break;
 | 
			
		||||
 | 
			
		||||
      assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i);
 | 
			
		||||
 | 
			
		||||
      swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy
 | 
			
		||||
      std::swap(sort_vals[i],sort_vals[idx[i]]);
 | 
			
		||||
 | 
			
		||||
      idx[j] = idx[i];
 | 
			
		||||
      idx[i] = i;
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals) 
 | 
			
		||||
{
 | 
			
		||||
  std::vector<int> idx(sort_vals.size());
 | 
			
		||||
  std::iota(idx.begin(), idx.end(), 0);
 | 
			
		||||
 | 
			
		||||
  // sort indexes based on comparing values in v
 | 
			
		||||
  std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) {
 | 
			
		||||
    return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]);
 | 
			
		||||
  });
 | 
			
		||||
  return idx;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse) 
 | 
			
		||||
{
 | 
			
		||||
  std::vector<int> idx = basisSortGetIndex(sort_vals);
 | 
			
		||||
  if (reverse)
 | 
			
		||||
    std::reverse(idx.begin(), idx.end());
 | 
			
		||||
  
 | 
			
		||||
  basisReorderInPlace(_v,sort_vals,idx);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
// PAB: faster to compute the inner products first then fuse loops.
 | 
			
		||||
// If performance critical can improve.
 | 
			
		||||
template<class Field>
 | 
			
		||||
void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) {
 | 
			
		||||
  result = Zero();
 | 
			
		||||
  assert(_v.size()==eval.size());
 | 
			
		||||
  int N = (int)_v.size();
 | 
			
		||||
  for (int i=0;i<N;i++) {
 | 
			
		||||
    Field& tmp = _v[i];
 | 
			
		||||
    axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
@@ -42,34 +42,6 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
typedef iScalar<vInteger> vPredicate ;
 | 
			
		||||
 | 
			
		||||
/*
 | 
			
		||||
template <class iobj, class vobj, class robj> accelerator_inline 
 | 
			
		||||
vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, const robj &iffalse) 
 | 
			
		||||
{
 | 
			
		||||
  typename std::remove_const<vobj>::type ret;
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::scalar_object scalar_object;
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
 | 
			
		||||
  const int Nsimd = vobj::vector_type::Nsimd();
 | 
			
		||||
 | 
			
		||||
  ExtractBuffer<Integer> mask(Nsimd);
 | 
			
		||||
  ExtractBuffer<scalar_object> truevals(Nsimd);
 | 
			
		||||
  ExtractBuffer<scalar_object> falsevals(Nsimd);
 | 
			
		||||
 | 
			
		||||
  extract(iftrue, truevals);
 | 
			
		||||
  extract(iffalse, falsevals);
 | 
			
		||||
  extract<vInteger, Integer>(TensorRemove(predicate), mask);
 | 
			
		||||
 | 
			
		||||
  for (int s = 0; s < Nsimd; s++) {
 | 
			
		||||
    if (mask[s]) falsevals[s] = truevals[s];
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  merge(ret, falsevals);
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
*/
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// compare lattice to lattice
 | 
			
		||||
//////////////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -78,9 +50,9 @@ template<class vfunctor,class lobj,class robj>
 | 
			
		||||
inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs)
 | 
			
		||||
{
 | 
			
		||||
  Lattice<vPredicate> ret(rhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( lhs_v, lhs, CpuRead);
 | 
			
		||||
  autoView( rhs_v, rhs, CpuRead);
 | 
			
		||||
  autoView( ret_v, ret, CpuWrite);
 | 
			
		||||
  thread_for( ss, rhs_v.size(), {
 | 
			
		||||
      ret_v[ss]=op(lhs_v[ss],rhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
@@ -93,8 +65,8 @@ template<class vfunctor,class lobj,class robj>
 | 
			
		||||
inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs)
 | 
			
		||||
{
 | 
			
		||||
  Lattice<vPredicate> ret(lhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( lhs_v, lhs, CpuRead);
 | 
			
		||||
  autoView( ret_v, ret, CpuWrite);
 | 
			
		||||
  thread_for( ss, lhs_v.size(), {
 | 
			
		||||
    ret_v[ss]=op(lhs_v[ss],rhs);
 | 
			
		||||
  });
 | 
			
		||||
@@ -107,8 +79,8 @@ template<class vfunctor,class lobj,class robj>
 | 
			
		||||
inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs)
 | 
			
		||||
{
 | 
			
		||||
  Lattice<vPredicate> ret(rhs.Grid());
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( rhs_v, rhs, CpuRead);
 | 
			
		||||
  autoView( ret_v, ret, CpuWrite);
 | 
			
		||||
  thread_for( ss, rhs_v.size(), {
 | 
			
		||||
    ret_v[ss]=op(lhs,rhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
 
 | 
			
		||||
@@ -37,7 +37,7 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu)
 | 
			
		||||
  GridBase *grid = l.Grid();
 | 
			
		||||
  int Nsimd = grid->iSites();
 | 
			
		||||
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  autoView(l_v, l, CpuWrite);
 | 
			
		||||
  thread_for( o, grid->oSites(), {
 | 
			
		||||
    vector_type vI;
 | 
			
		||||
    Coordinate gcoor;
 | 
			
		||||
@@ -51,23 +51,5 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu)
 | 
			
		||||
  });
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
// LatticeCoordinate();
 | 
			
		||||
// FIXME for debug; deprecate this; made obscelete by 
 | 
			
		||||
template<class vobj> void lex_sites(Lattice<vobj> &l){
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  Real *v_ptr = (Real *)&l_v[0];
 | 
			
		||||
  size_t o_len = l.Grid()->oSites();
 | 
			
		||||
  size_t v_len = sizeof(vobj)/sizeof(vRealF);
 | 
			
		||||
  size_t vec_len = vRealF::Nsimd();
 | 
			
		||||
 | 
			
		||||
  for(int i=0;i<o_len;i++){
 | 
			
		||||
    for(int j=0;j<v_len;j++){
 | 
			
		||||
      for(int vv=0;vv<vec_len;vv+=2){
 | 
			
		||||
	v_ptr[i*v_len*vec_len+j*vec_len+vv  ]= i+vv*500;
 | 
			
		||||
	v_ptr[i*v_len*vec_len+j*vec_len+vv+1]= i+vv*500;
 | 
			
		||||
      }
 | 
			
		||||
    }}
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -43,8 +43,8 @@ template<class vobj>
 | 
			
		||||
inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced>
 | 
			
		||||
{
 | 
			
		||||
  Lattice<typename vobj::tensor_reduced> ret(rhs.Grid());
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
@@ -56,9 +56,9 @@ template<class vobj>
 | 
			
		||||
inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced>
 | 
			
		||||
{
 | 
			
		||||
  Lattice<typename vobj::tensor_reduced> ret(rhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
@@ -73,9 +73,9 @@ inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Latt
 | 
			
		||||
  typedef decltype(coalescedRead(ll())) sll;
 | 
			
		||||
  typedef decltype(coalescedRead(rr())) srr;
 | 
			
		||||
  Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  accelerator_for(ss,rhs_v.size(),1,{
 | 
			
		||||
    // FIXME had issues with scalar version of outer 
 | 
			
		||||
    // Use vector [] operator and don't read coalesce this loop
 | 
			
		||||
 
 | 
			
		||||
@@ -51,9 +51,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice
 | 
			
		||||
  int block =FullGrid->_slice_block [Orthog];
 | 
			
		||||
  int nblock=FullGrid->_slice_nblock[Orthog];
 | 
			
		||||
  int ostride=FullGrid->_ostride[Orthog];
 | 
			
		||||
  auto X_v = X.View();
 | 
			
		||||
  auto Y_v = Y.View();
 | 
			
		||||
  auto R_v = R.View();
 | 
			
		||||
  autoView( X_v , X, CpuRead);
 | 
			
		||||
  autoView( Y_v , Y, CpuRead);
 | 
			
		||||
  autoView( R_v , R, CpuWrite);
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
    std::vector<vobj> s_x(Nblock);
 | 
			
		||||
@@ -97,8 +97,8 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<
 | 
			
		||||
  int nblock=FullGrid->_slice_nblock[Orthog];
 | 
			
		||||
  int ostride=FullGrid->_ostride[Orthog];
 | 
			
		||||
 | 
			
		||||
  auto X_v = X.View();
 | 
			
		||||
  auto R_v = R.View();
 | 
			
		||||
  autoView( X_v , X, CpuRead);
 | 
			
		||||
  autoView( R_v , R, CpuWrite);
 | 
			
		||||
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
@@ -156,8 +156,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj>
 | 
			
		||||
  int ostride=FullGrid->_ostride[Orthog];
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::vector_typeD vector_typeD;
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  autoView( lhs_v , lhs, CpuRead);
 | 
			
		||||
  autoView( rhs_v , rhs, CpuRead);
 | 
			
		||||
  thread_region {
 | 
			
		||||
    std::vector<vobj> Left(Nblock);
 | 
			
		||||
    std::vector<vobj> Right(Nblock);
 | 
			
		||||
 
 | 
			
		||||
@@ -46,9 +46,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Ind
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid());
 | 
			
		||||
  ret.Checkerboard()=lhs.Checkerboard();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for( ss, lhs_v.size(), {
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] = peekIndex<Index>(lhs_v[ss],i);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
@@ -58,9 +58,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid());
 | 
			
		||||
  ret.Checkerboard()=lhs.Checkerboard();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for( ss, lhs_v.size(), {
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
@@ -72,18 +72,18 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd
 | 
			
		||||
template<int Index,class vobj>  
 | 
			
		||||
void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i)
 | 
			
		||||
{
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for( ss, lhs_v.size(), {
 | 
			
		||||
  autoView( rhs_v, rhs, AcceleratorRead);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorWrite);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i);
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
template<int Index,class vobj> 
 | 
			
		||||
void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j)
 | 
			
		||||
{
 | 
			
		||||
  auto rhs_v = rhs.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  thread_for( ss, lhs_v.size(), {
 | 
			
		||||
  autoView( rhs_v, rhs, AcceleratorRead);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorWrite);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j);
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
@@ -111,7 +111,7 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){
 | 
			
		||||
 | 
			
		||||
  // extract-modify-merge cycle is easiest way and this is not perf critical
 | 
			
		||||
  ExtractBuffer<sobj> buf(Nsimd);
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  autoView( l_v , l, CpuWrite);
 | 
			
		||||
  if ( rank == grid->ThisRank() ) {
 | 
			
		||||
    extract(l_v[odx],buf);
 | 
			
		||||
    buf[idx] = s;
 | 
			
		||||
@@ -141,7 +141,7 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){
 | 
			
		||||
  grid->GlobalCoorToRankIndex(rank,odx,idx,site);
 | 
			
		||||
 | 
			
		||||
  ExtractBuffer<sobj> buf(Nsimd);
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  autoView( l_v , l, CpuWrite);
 | 
			
		||||
  extract(l_v[odx],buf);
 | 
			
		||||
 | 
			
		||||
  s = buf[idx];
 | 
			
		||||
@@ -151,21 +151,21 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){
 | 
			
		||||
  return;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
//////////////////////////////////////////////////////////
 | 
			
		||||
// Peek a scalar object from the SIMD array
 | 
			
		||||
//////////////////////////////////////////////////////////
 | 
			
		||||
// Must be CPU read view
 | 
			
		||||
template<class vobj,class sobj>
 | 
			
		||||
accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site){
 | 
			
		||||
        
 | 
			
		||||
  GridBase *grid = l.Grid();
 | 
			
		||||
 | 
			
		||||
inline void peekLocalSite(sobj &s,const LatticeView<vobj> &l,Coordinate &site)
 | 
			
		||||
{
 | 
			
		||||
  GridBase *grid = l.getGrid();
 | 
			
		||||
  assert(l.mode==CpuRead);
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
 | 
			
		||||
  int Nsimd = grid->Nsimd();
 | 
			
		||||
 | 
			
		||||
  assert( l.Checkerboard()== l.Grid()->CheckerBoard(site));
 | 
			
		||||
  assert( l.Checkerboard()== grid->CheckerBoard(site));
 | 
			
		||||
  assert( sizeof(sobj)*Nsimd == sizeof(vobj));
 | 
			
		||||
 | 
			
		||||
  static const int words=sizeof(vobj)/sizeof(vector_type);
 | 
			
		||||
@@ -173,8 +173,7 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate
 | 
			
		||||
  idx= grid->iIndex(site);
 | 
			
		||||
  odx= grid->oIndex(site);
 | 
			
		||||
  
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  scalar_type * vp = (scalar_type *)&l_v[odx];
 | 
			
		||||
  scalar_type * vp = (scalar_type *)&l[odx];
 | 
			
		||||
  scalar_type * pt = (scalar_type *)&s;
 | 
			
		||||
      
 | 
			
		||||
  for(int w=0;w<words;w++){
 | 
			
		||||
@@ -183,18 +182,27 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate
 | 
			
		||||
      
 | 
			
		||||
  return;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class vobj,class sobj>
 | 
			
		||||
accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate &site){
 | 
			
		||||
inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site)
 | 
			
		||||
{
 | 
			
		||||
  autoView(lv,l,CpuRead);
 | 
			
		||||
  peekLocalSite(s,lv,site);
 | 
			
		||||
  return;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
  GridBase *grid=l.Grid();
 | 
			
		||||
// Must be CPU write view
 | 
			
		||||
template<class vobj,class sobj>
 | 
			
		||||
inline void pokeLocalSite(const sobj &s,LatticeView<vobj> &l,Coordinate &site)
 | 
			
		||||
{
 | 
			
		||||
  GridBase *grid=l.getGrid();
 | 
			
		||||
  assert(l.mode==CpuWrite);
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
  typedef typename vobj::vector_type vector_type;
 | 
			
		||||
 | 
			
		||||
  int Nsimd = grid->Nsimd();
 | 
			
		||||
 | 
			
		||||
  assert( l.Checkerboard()== l.Grid()->CheckerBoard(site));
 | 
			
		||||
  assert( l.Checkerboard()== grid->CheckerBoard(site));
 | 
			
		||||
  assert( sizeof(sobj)*Nsimd == sizeof(vobj));
 | 
			
		||||
 | 
			
		||||
  static const int words=sizeof(vobj)/sizeof(vector_type);
 | 
			
		||||
@@ -202,13 +210,19 @@ accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate
 | 
			
		||||
  idx= grid->iIndex(site);
 | 
			
		||||
  odx= grid->oIndex(site);
 | 
			
		||||
 | 
			
		||||
  auto l_v = l.View();
 | 
			
		||||
  scalar_type * vp = (scalar_type *)&l_v[odx];
 | 
			
		||||
  scalar_type * vp = (scalar_type *)&l[odx];
 | 
			
		||||
  scalar_type * pt = (scalar_type *)&s;
 | 
			
		||||
  for(int w=0;w<words;w++){
 | 
			
		||||
    vp[idx+w*Nsimd] = pt[w];
 | 
			
		||||
  }
 | 
			
		||||
  return;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class vobj,class sobj>
 | 
			
		||||
inline void pokeLocalSite(const sobj &s, Lattice<vobj> &l,Coordinate &site)
 | 
			
		||||
{
 | 
			
		||||
  autoView(lv,l,CpuWrite);
 | 
			
		||||
  pokeLocalSite(s,lv,site);
 | 
			
		||||
  return;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,79 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
 | 
			
		||||
    Source file: ./lib/lattice/Lattice_reality.h
 | 
			
		||||
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: neo <cossu@post.kek.jp>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
    (at your option) any later version.
 | 
			
		||||
 | 
			
		||||
    This program is distributed in the hope that it will be useful,
 | 
			
		||||
    but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
    GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
    You should have received a copy of the GNU General Public License along
 | 
			
		||||
    with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
    51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
    See the full license in the file "LICENSE" in the top level distribution directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#ifndef GRID_LATTICE_REAL_IMAG_H
 | 
			
		||||
#define GRID_LATTICE_REAL_IMAG_H
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
// FIXME .. this is the sector of the code 
 | 
			
		||||
// I am most worried about the directions
 | 
			
		||||
// The choice of burying complex in the SIMD
 | 
			
		||||
// is making the use of "real" and "imag" very cumbersome
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class vobj> inline Lattice<vobj> real(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<vobj> ret(lhs.Grid());
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard()=lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] =real(lhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
template<class vobj> inline Lattice<vobj> imag(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<vobj> ret(lhs.Grid());
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard()=lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] =imag(lhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
  auto real(const Expression &expr) -> decltype(real(closure(expr)))		
 | 
			
		||||
{									
 | 
			
		||||
  return real(closure(expr));					
 | 
			
		||||
}
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
  auto imag(const Expression &expr) -> decltype(imag(closure(expr)))		
 | 
			
		||||
{									
 | 
			
		||||
  return imag(closure(expr));					
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
@@ -40,24 +40,77 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<vobj> ret(lhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
 | 
			
		||||
    coalescedWrite(ret_v[ss], adj(lhs_v(ss)));
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard()=lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
     ret_v[ss] = adj(lhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<vobj> ret(lhs.Grid());
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
 | 
			
		||||
    coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class vobj> inline Lattice<typename vobj::Complexified> toComplex(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<typename vobj::Complexified> ret(lhs.Grid());
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] = toComplex(lhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
template<class vobj> inline Lattice<typename vobj::Realified> toReal(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<typename vobj::Realified> ret(lhs.Grid());
 | 
			
		||||
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  ret.Checkerboard() = lhs.Checkerboard();
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), 1, {
 | 
			
		||||
    ret_v[ss] = toReal(lhs_v[ss]);
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
auto toComplex(const Expression &expr)  -> decltype(closure(expr)) 
 | 
			
		||||
{
 | 
			
		||||
  return toComplex(closure(expr));
 | 
			
		||||
}
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
auto toReal(const Expression &expr)  -> decltype(closure(expr)) 
 | 
			
		||||
{
 | 
			
		||||
  return toReal(closure(expr));
 | 
			
		||||
}
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
auto adj(const Expression &expr)  -> decltype(closure(expr)) 
 | 
			
		||||
{
 | 
			
		||||
  return adj(closure(expr));
 | 
			
		||||
}
 | 
			
		||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> 
 | 
			
		||||
auto conjugate(const Expression &expr)  -> decltype(closure(expr)) 
 | 
			
		||||
{
 | 
			
		||||
  return conjugate(closure(expr));
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
 
 | 
			
		||||
@@ -5,6 +5,7 @@
 | 
			
		||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de>
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
    the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
@@ -24,7 +25,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <Grid/Grid_Eigen_Dense.h>
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
 | 
			
		||||
#include <Grid/lattice/Lattice_reduction_gpu.h>
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
@@ -38,7 +39,36 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites)
 | 
			
		||||
{
 | 
			
		||||
  typedef typename vobj::scalar_object  sobj;
 | 
			
		||||
 | 
			
		||||
  const int Nsimd = vobj::Nsimd();
 | 
			
		||||
  //  const int Nsimd = vobj::Nsimd();
 | 
			
		||||
  const int nthread = GridThread::GetThreads();
 | 
			
		||||
 | 
			
		||||
  Vector<sobj> sumarray(nthread);
 | 
			
		||||
  for(int i=0;i<nthread;i++){
 | 
			
		||||
    sumarray[i]=Zero();
 | 
			
		||||
  }
 | 
			
		||||
  
 | 
			
		||||
  thread_for(thr,nthread, {
 | 
			
		||||
    int nwork, mywork, myoff;
 | 
			
		||||
    nwork = osites;
 | 
			
		||||
    GridThread::GetWork(nwork,thr,mywork,myoff);
 | 
			
		||||
    vobj vvsum=Zero();
 | 
			
		||||
    for(int ss=myoff;ss<mywork+myoff; ss++){
 | 
			
		||||
      vvsum = vvsum + arg[ss];
 | 
			
		||||
    }
 | 
			
		||||
    sumarray[thr]=Reduce(vvsum);
 | 
			
		||||
  });
 | 
			
		||||
  
 | 
			
		||||
  sobj ssum=Zero();  // sum across threads
 | 
			
		||||
  for(int i=0;i<nthread;i++){
 | 
			
		||||
    ssum = ssum+sumarray[i];
 | 
			
		||||
  } 
 | 
			
		||||
  return ssum;
 | 
			
		||||
}
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites)
 | 
			
		||||
{
 | 
			
		||||
  typedef typename vobj::scalar_objectD  sobj;
 | 
			
		||||
 | 
			
		||||
  const int nthread = GridThread::GetThreads();
 | 
			
		||||
 | 
			
		||||
  Vector<sobj> sumarray(nthread);
 | 
			
		||||
@@ -62,23 +92,43 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites)
 | 
			
		||||
    ssum = ssum+sumarray[i];
 | 
			
		||||
  } 
 | 
			
		||||
  
 | 
			
		||||
  return ssum;
 | 
			
		||||
  typedef typename vobj::scalar_object ssobj;
 | 
			
		||||
  ssobj ret = ssum;
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline typename vobj::scalar_object sum(const vobj *arg, Integer osites)
 | 
			
		||||
{
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
 | 
			
		||||
  return sum_gpu(arg,osites);
 | 
			
		||||
#else
 | 
			
		||||
  return sum_cpu(arg,osites);
 | 
			
		||||
#endif  
 | 
			
		||||
}
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline typename vobj::scalar_objectD sumD(const vobj *arg, Integer osites)
 | 
			
		||||
{
 | 
			
		||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
 | 
			
		||||
  return sumD_gpu(arg,osites);
 | 
			
		||||
#else
 | 
			
		||||
  return sumD_cpu(arg,osites);
 | 
			
		||||
#endif  
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline typename vobj::scalar_object sum(const Lattice<vobj> &arg)
 | 
			
		||||
{
 | 
			
		||||
  auto arg_v = arg.View();
 | 
			
		||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
 | 
			
		||||
  autoView( arg_v, arg, AcceleratorRead);
 | 
			
		||||
  Integer osites = arg.Grid()->oSites();
 | 
			
		||||
  auto ssum= sum(&arg_v[0],osites);
 | 
			
		||||
  auto ssum= sum_gpu(&arg_v[0],osites);
 | 
			
		||||
#else
 | 
			
		||||
  autoView(arg_v, arg, CpuRead);
 | 
			
		||||
  Integer osites = arg.Grid()->oSites();
 | 
			
		||||
  auto ssum= sum_cpu(&arg_v[0],osites);
 | 
			
		||||
#endif  
 | 
			
		||||
  arg.Grid()->GlobalSum(ssum);
 | 
			
		||||
  return ssum;
 | 
			
		||||
}
 | 
			
		||||
@@ -93,55 +143,49 @@ template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){
 | 
			
		||||
 | 
			
		||||
// Double inner product
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right)
 | 
			
		||||
inline ComplexD rankInnerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right)
 | 
			
		||||
{
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
  typedef typename vobj::vector_typeD vector_type;
 | 
			
		||||
  ComplexD  nrm;
 | 
			
		||||
  
 | 
			
		||||
  GridBase *grid = left.Grid();
 | 
			
		||||
  
 | 
			
		||||
  // Might make all code paths go this way.
 | 
			
		||||
  auto left_v = left.View();
 | 
			
		||||
  auto right_v=right.View();
 | 
			
		||||
 | 
			
		||||
  const uint64_t nsimd = grid->Nsimd();
 | 
			
		||||
  const uint64_t sites = grid->oSites();
 | 
			
		||||
  
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
  // GPU - SIMT lane compliance...
 | 
			
		||||
  typedef decltype(innerProduct(left_v[0],right_v[0])) inner_t;
 | 
			
		||||
  // Might make all code paths go this way.
 | 
			
		||||
  typedef decltype(innerProductD(vobj(),vobj())) inner_t;
 | 
			
		||||
  Vector<inner_t> inner_tmp(sites);
 | 
			
		||||
  auto inner_tmp_v = &inner_tmp[0];
 | 
			
		||||
  
 | 
			
		||||
    
 | 
			
		||||
  {
 | 
			
		||||
    autoView( left_v , left, AcceleratorRead);
 | 
			
		||||
    autoView( right_v,right, AcceleratorRead);
 | 
			
		||||
 | 
			
		||||
  accelerator_for( ss, sites, nsimd,{
 | 
			
		||||
      auto x_l = left_v(ss);
 | 
			
		||||
      auto y_l = right_v(ss);
 | 
			
		||||
      coalescedWrite(inner_tmp_v[ss],innerProduct(x_l,y_l));
 | 
			
		||||
  })
 | 
			
		||||
    // GPU - SIMT lane compliance...
 | 
			
		||||
    accelerator_for( ss, sites, 1,{
 | 
			
		||||
	auto x_l = left_v[ss];
 | 
			
		||||
	auto y_l = right_v[ss];
 | 
			
		||||
	inner_tmp_v[ss]=innerProductD(x_l,y_l);
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // This is in single precision and fails some tests
 | 
			
		||||
  // Need a sumD that sums in double
 | 
			
		||||
  nrm = TensorRemove(sumD_gpu(inner_tmp_v,sites));  
 | 
			
		||||
#else
 | 
			
		||||
  // CPU 
 | 
			
		||||
  typedef decltype(innerProductD(left_v[0],right_v[0])) inner_t;
 | 
			
		||||
  Vector<inner_t> inner_tmp(sites);
 | 
			
		||||
  auto inner_tmp_v = &inner_tmp[0];
 | 
			
		||||
  
 | 
			
		||||
  accelerator_for( ss, sites, nsimd,{
 | 
			
		||||
      auto x_l = left_v[ss];
 | 
			
		||||
      auto y_l = right_v[ss];
 | 
			
		||||
      inner_tmp_v[ss]=innerProductD(x_l,y_l);
 | 
			
		||||
  })
 | 
			
		||||
  nrm = TensorRemove(sum(inner_tmp_v,sites));
 | 
			
		||||
#endif
 | 
			
		||||
  grid->GlobalSum(nrm);
 | 
			
		||||
 | 
			
		||||
  auto anrm = sum(inner_tmp_v,sites);  
 | 
			
		||||
  nrm = anrm;
 | 
			
		||||
  return nrm;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) {
 | 
			
		||||
  GridBase *grid = left.Grid();
 | 
			
		||||
  ComplexD nrm = rankInnerProduct(left,right);
 | 
			
		||||
  grid->GlobalSum(nrm);
 | 
			
		||||
  return nrm;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
/////////////////////////
 | 
			
		||||
// Fast axpby_norm
 | 
			
		||||
// z = a x + b y
 | 
			
		||||
@@ -167,45 +211,67 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt
 | 
			
		||||
  
 | 
			
		||||
  GridBase *grid = x.Grid();
 | 
			
		||||
 | 
			
		||||
  auto x_v=x.View();
 | 
			
		||||
  auto y_v=y.View();
 | 
			
		||||
  auto z_v=z.View();
 | 
			
		||||
 | 
			
		||||
  const uint64_t nsimd = grid->Nsimd();
 | 
			
		||||
  const uint64_t sites = grid->oSites();
 | 
			
		||||
  
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
  // GPU
 | 
			
		||||
  typedef decltype(innerProduct(x_v[0],y_v[0])) inner_t;
 | 
			
		||||
  Vector<inner_t> inner_tmp(sites);
 | 
			
		||||
  auto inner_tmp_v = &inner_tmp[0];
 | 
			
		||||
  autoView( x_v, x, AcceleratorRead);
 | 
			
		||||
  autoView( y_v, y, AcceleratorRead);
 | 
			
		||||
  autoView( z_v, z, AcceleratorWrite);
 | 
			
		||||
 | 
			
		||||
  accelerator_for( ss, sites, nsimd,{
 | 
			
		||||
      auto tmp = a*x_v(ss)+b*y_v(ss);
 | 
			
		||||
      coalescedWrite(inner_tmp_v[ss],innerProduct(tmp,tmp));
 | 
			
		||||
      coalescedWrite(z_v[ss],tmp);
 | 
			
		||||
  });
 | 
			
		||||
 | 
			
		||||
  nrm = real(TensorRemove(sumD_gpu(inner_tmp_v,sites)));
 | 
			
		||||
#else
 | 
			
		||||
  // CPU 
 | 
			
		||||
  typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t;
 | 
			
		||||
  Vector<inner_t> inner_tmp(sites);
 | 
			
		||||
  auto inner_tmp_v = &inner_tmp[0];
 | 
			
		||||
  
 | 
			
		||||
  accelerator_for( ss, sites, nsimd,{
 | 
			
		||||
      auto tmp = a*x_v(ss)+b*y_v(ss);
 | 
			
		||||
 | 
			
		||||
  accelerator_for( ss, sites, 1,{
 | 
			
		||||
      auto tmp = a*x_v[ss]+b*y_v[ss];
 | 
			
		||||
      inner_tmp_v[ss]=innerProductD(tmp,tmp);
 | 
			
		||||
      z_v[ss]=tmp;
 | 
			
		||||
  });
 | 
			
		||||
  // Already promoted to double
 | 
			
		||||
  nrm = real(TensorRemove(sum(inner_tmp_v,sites)));
 | 
			
		||||
#endif
 | 
			
		||||
  grid->GlobalSum(nrm);
 | 
			
		||||
  return nrm; 
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
template<class vobj> strong_inline void
 | 
			
		||||
innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Lattice<vobj> &right)
 | 
			
		||||
{
 | 
			
		||||
  conformable(left,right);
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::scalar_type scalar_type;
 | 
			
		||||
  typedef typename vobj::vector_typeD vector_type;
 | 
			
		||||
  Vector<ComplexD> tmp(2);
 | 
			
		||||
 | 
			
		||||
  GridBase *grid = left.Grid();
 | 
			
		||||
 | 
			
		||||
  const uint64_t nsimd = grid->Nsimd();
 | 
			
		||||
  const uint64_t sites = grid->oSites();
 | 
			
		||||
 | 
			
		||||
  // GPU
 | 
			
		||||
  typedef decltype(innerProductD(vobj(),vobj())) inner_t;
 | 
			
		||||
  typedef decltype(innerProductD(vobj(),vobj())) norm_t;
 | 
			
		||||
  Vector<inner_t> inner_tmp(sites);
 | 
			
		||||
  Vector<norm_t>  norm_tmp(sites);
 | 
			
		||||
  auto inner_tmp_v = &inner_tmp[0];
 | 
			
		||||
  auto norm_tmp_v = &norm_tmp[0];
 | 
			
		||||
  {
 | 
			
		||||
    autoView(left_v,left, AcceleratorRead);
 | 
			
		||||
    autoView(right_v,right,AcceleratorRead);
 | 
			
		||||
    accelerator_for( ss, sites, 1,{
 | 
			
		||||
	auto left_tmp = left_v[ss];
 | 
			
		||||
	inner_tmp_v[ss]=innerProductD(left_tmp,right_v[ss]);
 | 
			
		||||
        norm_tmp_v [ss]=innerProductD(left_tmp,left_tmp);
 | 
			
		||||
      });
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  tmp[0] = TensorRemove(sum(inner_tmp_v,sites));
 | 
			
		||||
  tmp[1] = TensorRemove(sum(norm_tmp_v,sites));
 | 
			
		||||
 | 
			
		||||
  grid->GlobalSumVector(&tmp[0],2); // keep norm Complex -> can use GlobalSumVector
 | 
			
		||||
  ip = tmp[0];
 | 
			
		||||
  nrm = real(tmp[1]);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class Op,class T1>
 | 
			
		||||
inline auto sum(const LatticeUnaryExpression<Op,T1> & expr)
 | 
			
		||||
  ->typename decltype(expr.op.func(eval(0,expr.arg1)))::scalar_object
 | 
			
		||||
@@ -271,7 +337,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<
 | 
			
		||||
 | 
			
		||||
  // sum over reduced dimension planes, breaking out orthog dir
 | 
			
		||||
  // Parallel over orthog direction
 | 
			
		||||
  auto Data_v=Data.View();
 | 
			
		||||
  autoView( Data_v, Data, CpuRead);
 | 
			
		||||
  thread_for( r,rd, {
 | 
			
		||||
    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
 | 
			
		||||
    for(int n=0;n<e1;n++){
 | 
			
		||||
@@ -349,8 +415,8 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti
 | 
			
		||||
  int e2=    grid->_slice_block [orthogdim];
 | 
			
		||||
  int stride=grid->_slice_stride[orthogdim];
 | 
			
		||||
 | 
			
		||||
  auto lhv=lhs.View();
 | 
			
		||||
  auto rhv=rhs.View();
 | 
			
		||||
  autoView( lhv, lhs, CpuRead);
 | 
			
		||||
  autoView( rhv, rhs, CpuRead);
 | 
			
		||||
  thread_for( r,rd,{
 | 
			
		||||
 | 
			
		||||
    int so=r*grid->_ostride[orthogdim]; // base offset for start of plane 
 | 
			
		||||
@@ -457,14 +523,12 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice
 | 
			
		||||
 | 
			
		||||
    tensor_reduced at; at=av;
 | 
			
		||||
 | 
			
		||||
    auto Rv=R.View();
 | 
			
		||||
    auto Xv=X.View();
 | 
			
		||||
    auto Yv=Y.View();
 | 
			
		||||
    thread_for_collapse(2, n, e1, {
 | 
			
		||||
      for(int b=0;b<e2;b++){
 | 
			
		||||
    autoView( Rv, R, CpuWrite);
 | 
			
		||||
    autoView( Xv, X, CpuRead);
 | 
			
		||||
    autoView( Yv, Y, CpuRead);
 | 
			
		||||
    thread_for2d( n, e1, b,e2, {
 | 
			
		||||
	int ss= so+n*stride+b;
 | 
			
		||||
	Rv[ss] = at*Xv[ss]+Yv[ss];
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
@@ -517,9 +581,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice
 | 
			
		||||
  int nblock=FullGrid->_slice_nblock[Orthog];
 | 
			
		||||
  int ostride=FullGrid->_ostride[Orthog];
 | 
			
		||||
 | 
			
		||||
  auto X_v=X.View();
 | 
			
		||||
  auto Y_v=Y.View();
 | 
			
		||||
  auto R_v=R.View();
 | 
			
		||||
  autoView( X_v, X, CpuRead);
 | 
			
		||||
  autoView( Y_v, Y, CpuRead);
 | 
			
		||||
  autoView( R_v, R, CpuWrite);
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
    Vector<vobj> s_x(Nblock);
 | 
			
		||||
@@ -564,13 +628,14 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<
 | 
			
		||||
  //  int nl=1;
 | 
			
		||||
 | 
			
		||||
  //FIXME package in a convenient iterator
 | 
			
		||||
  // thread_for2d_in_region
 | 
			
		||||
  //Should loop over a plane orthogonal to direction "Orthog"
 | 
			
		||||
  int stride=FullGrid->_slice_stride[Orthog];
 | 
			
		||||
  int block =FullGrid->_slice_block [Orthog];
 | 
			
		||||
  int nblock=FullGrid->_slice_nblock[Orthog];
 | 
			
		||||
  int ostride=FullGrid->_ostride[Orthog];
 | 
			
		||||
  auto R_v = R.View();
 | 
			
		||||
  auto X_v = X.View();
 | 
			
		||||
  autoView( R_v, R, CpuWrite);
 | 
			
		||||
  autoView( X_v, X, CpuRead);
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
    std::vector<vobj> s_x(Nblock);
 | 
			
		||||
@@ -628,8 +693,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj>
 | 
			
		||||
 | 
			
		||||
  typedef typename vobj::vector_typeD vector_typeD;
 | 
			
		||||
 | 
			
		||||
  auto lhs_v=lhs.View();
 | 
			
		||||
  auto rhs_v=rhs.View();
 | 
			
		||||
  autoView( lhs_v, lhs, CpuRead);
 | 
			
		||||
  autoView( rhs_v, rhs, CpuRead);
 | 
			
		||||
  thread_region
 | 
			
		||||
  {
 | 
			
		||||
    std::vector<vobj> Left(Nblock);
 | 
			
		||||
 
 | 
			
		||||
@@ -1,7 +1,14 @@
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
#define WARP_SIZE 32
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
extern hipDeviceProp_t *gpu_props;
 | 
			
		||||
#define WARP_SIZE 64
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
extern cudaDeviceProp *gpu_props;
 | 
			
		||||
#define WARP_SIZE 32
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
__device__ unsigned int retirementCount = 0;
 | 
			
		||||
 | 
			
		||||
template <class Iterator>
 | 
			
		||||
@@ -19,7 +26,12 @@ template <class Iterator>
 | 
			
		||||
void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) {
 | 
			
		||||
  
 | 
			
		||||
  int device;
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
  cudaGetDevice(&device);
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef GRID_HIP
 | 
			
		||||
  hipGetDevice(&device);
 | 
			
		||||
#endif
 | 
			
		||||
  
 | 
			
		||||
  Iterator warpSize            = gpu_props[device].warpSize;
 | 
			
		||||
  Iterator sharedMemPerBlock   = gpu_props[device].sharedMemPerBlock;
 | 
			
		||||
@@ -53,7 +65,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
 | 
			
		||||
  
 | 
			
		||||
  // cannot use overloaded operators for sobj as they are not volatile-qualified
 | 
			
		||||
  memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj));
 | 
			
		||||
  __syncwarp();
 | 
			
		||||
  acceleratorSynchronise();
 | 
			
		||||
  
 | 
			
		||||
  const Iterator VEC = WARP_SIZE;
 | 
			
		||||
  const Iterator vid = tid & (VEC-1);
 | 
			
		||||
@@ -67,9 +79,9 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
 | 
			
		||||
      beta += temp;
 | 
			
		||||
      memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj));
 | 
			
		||||
    }
 | 
			
		||||
    __syncwarp();
 | 
			
		||||
    acceleratorSynchronise();
 | 
			
		||||
  }
 | 
			
		||||
  __syncthreads();
 | 
			
		||||
  acceleratorSynchroniseAll();
 | 
			
		||||
  
 | 
			
		||||
  if (threadIdx.x == 0) {
 | 
			
		||||
    beta  = Zero();
 | 
			
		||||
@@ -79,7 +91,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
 | 
			
		||||
    }
 | 
			
		||||
    memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj));
 | 
			
		||||
  }
 | 
			
		||||
  __syncthreads();
 | 
			
		||||
  acceleratorSynchroniseAll();
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
@@ -147,7 +159,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) {
 | 
			
		||||
    sobj *smem = (sobj *)shmem_pointer;
 | 
			
		||||
    
 | 
			
		||||
    // wait until all outstanding memory instructions in this thread are finished
 | 
			
		||||
    __threadfence();
 | 
			
		||||
    acceleratorFence();
 | 
			
		||||
    
 | 
			
		||||
    if (tid==0) {
 | 
			
		||||
      unsigned int ticket = atomicInc(&retirementCount, gridDim.x);
 | 
			
		||||
@@ -156,8 +168,8 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) {
 | 
			
		||||
    }
 | 
			
		||||
    
 | 
			
		||||
    // each thread must read the correct value of amLast
 | 
			
		||||
    __syncthreads();
 | 
			
		||||
    
 | 
			
		||||
    acceleratorSynchroniseAll();
 | 
			
		||||
 | 
			
		||||
    if (amLast) {
 | 
			
		||||
      // reduce buffer[0], ..., buffer[gridDim.x-1]
 | 
			
		||||
      Iterator i = tid;
 | 
			
		||||
@@ -199,13 +211,7 @@ inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites)
 | 
			
		||||
  sobj *buffer_v = &buffer[0];
 | 
			
		||||
  
 | 
			
		||||
  reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size);
 | 
			
		||||
  cudaDeviceSynchronize();
 | 
			
		||||
  
 | 
			
		||||
  cudaError err = cudaGetLastError();
 | 
			
		||||
  if ( cudaSuccess != err ) {
 | 
			
		||||
    printf("Cuda error %s\n",cudaGetErrorString( err ));
 | 
			
		||||
    exit(0);
 | 
			
		||||
  }
 | 
			
		||||
  accelerator_barrier();
 | 
			
		||||
  auto result = buffer_v[0];
 | 
			
		||||
  return result;
 | 
			
		||||
}
 | 
			
		||||
 
 | 
			
		||||
@@ -375,7 +375,7 @@ public:
 | 
			
		||||
    int osites = _grid->oSites();  // guaranteed to be <= l.Grid()->oSites() by a factor multiplicity
 | 
			
		||||
    int words  = sizeof(scalar_object) / sizeof(scalar_type);
 | 
			
		||||
 | 
			
		||||
    auto l_v = l.View();
 | 
			
		||||
    autoView(l_v, l, CpuWrite);
 | 
			
		||||
    thread_for( ss, osites, {
 | 
			
		||||
      ExtractBuffer<scalar_object> buf(Nsimd);
 | 
			
		||||
      for (int m = 0; m < multiplicity; m++) {  // Draw from same generator multiplicity times
 | 
			
		||||
@@ -461,8 +461,8 @@ public:
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    {
 | 
			
		||||
      // Obtain one reseeded generator per thread
 | 
			
		||||
      int Nthread = GridThread::GetThreads();
 | 
			
		||||
      // Obtain one reseeded generator per thread      
 | 
			
		||||
      int Nthread = 32; // Hardwire a good level or parallelism
 | 
			
		||||
      std::vector<RngEngine> seeders(Nthread);
 | 
			
		||||
      for(int t=0;t<Nthread;t++){
 | 
			
		||||
	seeders[t] = Reseed(master_engine);
 | 
			
		||||
 
 | 
			
		||||
@@ -37,17 +37,19 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Trace
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
/*
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline auto trace(const Lattice<vobj> &lhs)  -> Lattice<decltype(trace(vobj()))>
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(trace(vobj()))> ret(lhs.Grid());
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView(ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView(lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
 | 
			
		||||
    coalescedWrite(ret_v[ss], trace(lhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
*/
 | 
			
		||||
    
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Trace Index level dependent operation
 | 
			
		||||
@@ -56,8 +58,8 @@ template<int Index,class vobj>
 | 
			
		||||
inline auto TraceIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(traceIndex<Index>(vobj()))>
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(traceIndex<Index>(vobj()))> ret(lhs.Grid());
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v , ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
 | 
			
		||||
    coalescedWrite(ret_v[ss], traceIndex<Index>(lhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
 
 | 
			
		||||
@@ -6,6 +6,7 @@
 | 
			
		||||
    Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
Author: Christoph Lehner <christoph@lhnr.de>
 | 
			
		||||
 | 
			
		||||
    This program is free software; you can redistribute it and/or modify
 | 
			
		||||
    it under the terms of the GNU General Public License as published by
 | 
			
		||||
@@ -46,11 +47,12 @@ inline void subdivides(GridBase *coarse,GridBase *fine)
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// remove and insert a half checkerboard
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full){
 | 
			
		||||
template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full)
 | 
			
		||||
{
 | 
			
		||||
  half.Checkerboard() = cb;
 | 
			
		||||
 | 
			
		||||
  auto half_v = half.View();
 | 
			
		||||
  auto full_v = full.View();
 | 
			
		||||
  autoView( half_v, half, CpuWrite);
 | 
			
		||||
  autoView( full_v, full, CpuRead);
 | 
			
		||||
  thread_for(ss, full.Grid()->oSites(),{
 | 
			
		||||
    int cbos;
 | 
			
		||||
    Coordinate coor;
 | 
			
		||||
@@ -63,10 +65,11 @@ template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,con
 | 
			
		||||
    }
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half){
 | 
			
		||||
template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half)
 | 
			
		||||
{
 | 
			
		||||
  int cb = half.Checkerboard();
 | 
			
		||||
  auto half_v = half.View();
 | 
			
		||||
  auto full_v = full.View();
 | 
			
		||||
  autoView( half_v , half, CpuRead);
 | 
			
		||||
  autoView( full_v , full, CpuWrite);
 | 
			
		||||
  thread_for(ss,full.Grid()->oSites(),{
 | 
			
		||||
 | 
			
		||||
    Coordinate coor;
 | 
			
		||||
@@ -81,96 +84,143 @@ template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Latti
 | 
			
		||||
    }
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
  
 | 
			
		||||
template<class vobj,class CComplex,int nbasis>
 | 
			
		||||
inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
			  const             Lattice<vobj>   &fineData,
 | 
			
		||||
			  const std::vector<Lattice<vobj> > &Basis)
 | 
			
		||||
{
 | 
			
		||||
  GridBase * fine  = fineData.Grid();
 | 
			
		||||
  GridBase * coarse= coarseData.Grid();
 | 
			
		||||
 | 
			
		||||
  Lattice<CComplex> ip(coarse); 
 | 
			
		||||
 | 
			
		||||
  //  auto fineData_   = fineData.View();
 | 
			
		||||
  auto coarseData_ = coarseData.View();
 | 
			
		||||
  auto ip_         = ip.View();
 | 
			
		||||
  for(int v=0;v<nbasis;v++) {
 | 
			
		||||
    blockInnerProduct(ip,Basis[v],fineData);
 | 
			
		||||
    accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), {
 | 
			
		||||
	coalescedWrite(coarseData_[sc](v),ip_(sc));
 | 
			
		||||
      });
 | 
			
		||||
  }
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Flexible Type Conversion for internal promotion to double as well as graceful
 | 
			
		||||
// treatment of scalar-compatible types
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
accelerator_inline void convertType(ComplexD & out, const std::complex<double> & in) {
 | 
			
		||||
  out = in;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex,int nbasis>
 | 
			
		||||
inline void blockProject1(Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
			 const             Lattice<vobj>   &fineData,
 | 
			
		||||
			 const std::vector<Lattice<vobj> > &Basis)
 | 
			
		||||
{
 | 
			
		||||
  typedef iVector<CComplex,nbasis > coarseSiteData;
 | 
			
		||||
  coarseSiteData elide;
 | 
			
		||||
  typedef decltype(coalescedRead(elide)) ScalarComplex;
 | 
			
		||||
  GridBase * fine  = fineData.Grid();
 | 
			
		||||
  GridBase * coarse= coarseData.Grid();
 | 
			
		||||
  int  _ndimension = coarse->_ndimension;
 | 
			
		||||
accelerator_inline void convertType(ComplexF & out, const std::complex<float> & in) {
 | 
			
		||||
  out = in;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
  // checks
 | 
			
		||||
  assert( nbasis == Basis.size() );
 | 
			
		||||
  subdivides(coarse,fine); 
 | 
			
		||||
  for(int i=0;i<nbasis;i++){
 | 
			
		||||
    conformable(Basis[i],fineData);
 | 
			
		||||
  }
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
accelerator_inline void convertType(vComplexF & out, const ComplexF & in) {
 | 
			
		||||
  ((ComplexF*)&out)[acceleratorSIMTlane(vComplexF::Nsimd())] = in;
 | 
			
		||||
}
 | 
			
		||||
accelerator_inline void convertType(vComplexD & out, const ComplexD & in) {
 | 
			
		||||
  ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd())] = in;
 | 
			
		||||
}
 | 
			
		||||
accelerator_inline void convertType(vComplexD2 & out, const ComplexD & in) {
 | 
			
		||||
  ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd()*2)] = in;
 | 
			
		||||
}
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
  Coordinate block_r      (_ndimension);
 | 
			
		||||
  
 | 
			
		||||
  for(int d=0 ; d<_ndimension;d++){
 | 
			
		||||
    block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
 | 
			
		||||
    assert(block_r[d]*coarse->_rdimensions[d] == fine->_rdimensions[d]);
 | 
			
		||||
  }
 | 
			
		||||
  int blockVol = fine->oSites()/coarse->oSites();
 | 
			
		||||
accelerator_inline void convertType(vComplexF & out, const vComplexD2 & in) {
 | 
			
		||||
  out.v = Optimization::PrecisionChange::DtoS(in._internal[0].v,in._internal[1].v);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
  coarseData=Zero();
 | 
			
		||||
accelerator_inline void convertType(vComplexD2 & out, const vComplexF & in) {
 | 
			
		||||
  Optimization::PrecisionChange::StoD(in.v,out._internal[0].v,out._internal[1].v);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
  auto fineData_   = fineData.View();
 | 
			
		||||
  auto coarseData_ = coarseData.View();
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // To make this lock free, loop over coars parallel, and then loop over fine associated with coarse.
 | 
			
		||||
  // Otherwise do fine inner product per site, and make the update atomic
 | 
			
		||||
  ////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  accelerator_for( sci, nbasis*coarse->oSites(), vobj::Nsimd(), {
 | 
			
		||||
template<typename T1,typename T2,int N>
 | 
			
		||||
  accelerator_inline void convertType(iMatrix<T1,N> & out, const iMatrix<T2,N> & in);
 | 
			
		||||
template<typename T1,typename T2,int N>
 | 
			
		||||
  accelerator_inline void convertType(iVector<T1,N> & out, const iVector<T2,N> & in);
 | 
			
		||||
 | 
			
		||||
    auto sc=sci/nbasis;
 | 
			
		||||
    auto i=sci%nbasis;
 | 
			
		||||
    auto Basis_      = Basis[i].View();
 | 
			
		||||
template<typename T1,typename T2, typename std::enable_if<!isGridScalar<T1>::value, T1>::type* = nullptr>
 | 
			
		||||
accelerator_inline void convertType(T1 & out, const iScalar<T2> & in) {
 | 
			
		||||
  convertType(out,in._internal);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
    Coordinate coor_c(_ndimension);
 | 
			
		||||
    Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate
 | 
			
		||||
template<typename T1, typename std::enable_if<!isGridScalar<T1>::value, T1>::type* = nullptr>
 | 
			
		||||
accelerator_inline void convertType(T1 & out, const iScalar<T1> & in) {
 | 
			
		||||
  convertType(out,in._internal);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
    int sf;
 | 
			
		||||
    decltype(innerProduct(Basis_(sf),fineData_(sf))) reduce=Zero();
 | 
			
		||||
template<typename T1,typename T2>
 | 
			
		||||
accelerator_inline void convertType(iScalar<T1> & out, const T2 & in) {
 | 
			
		||||
  convertType(out._internal,in);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
    for(int sb=0;sb<blockVol;sb++){
 | 
			
		||||
template<typename T1,typename T2,int N>
 | 
			
		||||
accelerator_inline void convertType(iMatrix<T1,N> & out, const iMatrix<T2,N> & in) {
 | 
			
		||||
  for (int i=0;i<N;i++)
 | 
			
		||||
    for (int j=0;j<N;j++)
 | 
			
		||||
      convertType(out._internal[i][j],in._internal[i][j]);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
      Coordinate coor_b(_ndimension);
 | 
			
		||||
      Coordinate coor_f(_ndimension);
 | 
			
		||||
template<typename T1,typename T2,int N>
 | 
			
		||||
accelerator_inline void convertType(iVector<T1,N> & out, const iVector<T2,N> & in) {
 | 
			
		||||
  for (int i=0;i<N;i++)
 | 
			
		||||
    convertType(out._internal[i],in._internal[i]);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
      Lexicographic::CoorFromIndex(coor_b,sb,block_r);
 | 
			
		||||
      for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d]+coor_b[d];
 | 
			
		||||
      Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions);
 | 
			
		||||
      
 | 
			
		||||
      reduce=reduce+innerProduct(Basis_(sf),fineData_(sf));
 | 
			
		||||
    }
 | 
			
		||||
    coalescedWrite(coarseData_[sc](i),reduce);
 | 
			
		||||
template<typename T, typename std::enable_if<isGridFundamental<T>::value, T>::type* = nullptr>
 | 
			
		||||
accelerator_inline void convertType(T & out, const T & in) {
 | 
			
		||||
  out = in;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<typename T1,typename T2>
 | 
			
		||||
accelerator_inline void convertType(Lattice<T1> & out, const Lattice<T2> & in) {
 | 
			
		||||
  autoView( out_v , out,AcceleratorWrite);
 | 
			
		||||
  autoView( in_v  , in ,AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,out_v.size(),T1::Nsimd(),{
 | 
			
		||||
      convertType(out_v[ss],in_v(ss));
 | 
			
		||||
  });
 | 
			
		||||
  return;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex>
 | 
			
		||||
inline void blockZAXPY(Lattice<vobj> &fineZ,
 | 
			
		||||
		       const Lattice<CComplex> &coarseA,
 | 
			
		||||
		       const Lattice<vobj> &fineX,
 | 
			
		||||
		       const Lattice<vobj> &fineY)
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// precision-promoted local inner product
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline auto localInnerProductD(const Lattice<vobj> &lhs,const Lattice<vobj> &rhs)
 | 
			
		||||
-> Lattice<iScalar<decltype(TensorRemove(innerProductD2(lhs.View(CpuRead)[0],rhs.View(CpuRead)[0])))>>
 | 
			
		||||
{
 | 
			
		||||
  autoView( lhs_v , lhs, AcceleratorRead);
 | 
			
		||||
  autoView( rhs_v , rhs, AcceleratorRead);
 | 
			
		||||
 | 
			
		||||
  typedef decltype(TensorRemove(innerProductD2(lhs_v[0],rhs_v[0]))) t_inner;
 | 
			
		||||
  Lattice<iScalar<t_inner>> ret(lhs.Grid());
 | 
			
		||||
 | 
			
		||||
  {
 | 
			
		||||
    autoView(ret_v, ret,AcceleratorWrite);
 | 
			
		||||
    accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
 | 
			
		||||
      convertType(ret_v[ss],innerProductD2(lhs_v(ss),rhs_v(ss)));
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
  return ret;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// block routines
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj,class CComplex,int nbasis,class VLattice>
 | 
			
		||||
inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
			   const             Lattice<vobj>   &fineData,
 | 
			
		||||
			   const VLattice &Basis)
 | 
			
		||||
{
 | 
			
		||||
  GridBase * fine  = fineData.Grid();
 | 
			
		||||
  GridBase * coarse= coarseData.Grid();
 | 
			
		||||
 | 
			
		||||
  Lattice<iScalar<CComplex>> ip(coarse);
 | 
			
		||||
  Lattice<vobj>     fineDataRed = fineData;
 | 
			
		||||
 | 
			
		||||
  autoView( coarseData_ , coarseData, AcceleratorWrite);
 | 
			
		||||
  autoView( ip_         , ip,         AcceleratorWrite);
 | 
			
		||||
  for(int v=0;v<nbasis;v++) {
 | 
			
		||||
    blockInnerProductD(ip,Basis[v],fineDataRed); // ip = <basis|fine>
 | 
			
		||||
    accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), {
 | 
			
		||||
	convertType(coarseData_[sc](v),ip_[sc]);
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
    // improve numerical stability of projection
 | 
			
		||||
    // |fine> = |fine> - <basis|fine> |basis>
 | 
			
		||||
    ip=-ip;
 | 
			
		||||
    blockZAXPY(fineDataRed,ip,Basis[v],fineDataRed); 
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
template<class vobj,class vobj2,class CComplex>
 | 
			
		||||
  inline void blockZAXPY(Lattice<vobj> &fineZ,
 | 
			
		||||
			 const Lattice<CComplex> &coarseA,
 | 
			
		||||
			 const Lattice<vobj2> &fineX,
 | 
			
		||||
			 const Lattice<vobj> &fineY)
 | 
			
		||||
{
 | 
			
		||||
  GridBase * fine  = fineZ.Grid();
 | 
			
		||||
  GridBase * coarse= coarseA.Grid();
 | 
			
		||||
@@ -182,7 +232,7 @@ inline void blockZAXPY(Lattice<vobj> &fineZ,
 | 
			
		||||
  conformable(fineX,fineZ);
 | 
			
		||||
 | 
			
		||||
  int _ndimension = coarse->_ndimension;
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  Coordinate  block_r      (_ndimension);
 | 
			
		||||
 | 
			
		||||
  // FIXME merge with subdivide checking routine as this is redundant
 | 
			
		||||
@@ -191,29 +241,68 @@ inline void blockZAXPY(Lattice<vobj> &fineZ,
 | 
			
		||||
    assert(block_r[d]*coarse->_rdimensions[d]==fine->_rdimensions[d]);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  auto fineZ_  = fineZ.View();
 | 
			
		||||
  auto fineX_  = fineX.View();
 | 
			
		||||
  auto fineY_  = fineY.View();
 | 
			
		||||
  auto coarseA_= coarseA.View();
 | 
			
		||||
  autoView( fineZ_  , fineZ, AcceleratorWrite);
 | 
			
		||||
  autoView( fineX_  , fineX, AcceleratorRead);
 | 
			
		||||
  autoView( fineY_  , fineY, AcceleratorRead);
 | 
			
		||||
  autoView( coarseA_, coarseA, AcceleratorRead);
 | 
			
		||||
  Coordinate fine_rdimensions = fine->_rdimensions;
 | 
			
		||||
  Coordinate coarse_rdimensions = coarse->_rdimensions;
 | 
			
		||||
 | 
			
		||||
  accelerator_for(sf, fine->oSites(), CComplex::Nsimd(), {
 | 
			
		||||
    
 | 
			
		||||
    int sc;
 | 
			
		||||
    Coordinate coor_c(_ndimension);
 | 
			
		||||
    Coordinate coor_f(_ndimension);
 | 
			
		||||
 | 
			
		||||
    Lexicographic::CoorFromIndex(coor_f,sf,fine->_rdimensions);
 | 
			
		||||
    for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d];
 | 
			
		||||
    Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions);
 | 
			
		||||
      int sc;
 | 
			
		||||
      Coordinate coor_c(_ndimension);
 | 
			
		||||
      Coordinate coor_f(_ndimension);
 | 
			
		||||
 | 
			
		||||
    // z = A x + y
 | 
			
		||||
    coalescedWrite(fineZ_[sf],coarseA_(sc)*fineX_(sf)+fineY_(sf));
 | 
			
		||||
      Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions);
 | 
			
		||||
      for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d];
 | 
			
		||||
      Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions);
 | 
			
		||||
 | 
			
		||||
  });
 | 
			
		||||
      // z = A x + y
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
      typename vobj2::tensor_reduced::scalar_object cA;
 | 
			
		||||
      typename vobj::scalar_object cAx;
 | 
			
		||||
#else
 | 
			
		||||
      typename vobj2::tensor_reduced cA;
 | 
			
		||||
      vobj cAx;
 | 
			
		||||
#endif
 | 
			
		||||
      convertType(cA,TensorRemove(coarseA_(sc)));
 | 
			
		||||
      auto prod = cA*fineX_(sf);
 | 
			
		||||
      convertType(cAx,prod);
 | 
			
		||||
      coalescedWrite(fineZ_[sf],cAx+fineY_(sf));
 | 
			
		||||
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
  return;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex>
 | 
			
		||||
  inline void blockInnerProductD(Lattice<CComplex> &CoarseInner,
 | 
			
		||||
				 const Lattice<vobj> &fineX,
 | 
			
		||||
				 const Lattice<vobj> &fineY)
 | 
			
		||||
{
 | 
			
		||||
  typedef iScalar<decltype(TensorRemove(innerProductD2(vobj(),vobj())))> dotp;
 | 
			
		||||
 | 
			
		||||
  GridBase *coarse(CoarseInner.Grid());
 | 
			
		||||
  GridBase *fine  (fineX.Grid());
 | 
			
		||||
 | 
			
		||||
  Lattice<dotp> fine_inner(fine); fine_inner.Checkerboard() = fineX.Checkerboard();
 | 
			
		||||
  Lattice<dotp> coarse_inner(coarse);
 | 
			
		||||
 | 
			
		||||
  // Precision promotion
 | 
			
		||||
  fine_inner = localInnerProductD<vobj>(fineX,fineY);
 | 
			
		||||
  blockSum(coarse_inner,fine_inner);
 | 
			
		||||
  {
 | 
			
		||||
    autoView( CoarseInner_  , CoarseInner,AcceleratorWrite);
 | 
			
		||||
    autoView( coarse_inner_ , coarse_inner,AcceleratorRead);
 | 
			
		||||
    accelerator_for(ss, coarse->oSites(), 1, {
 | 
			
		||||
      convertType(CoarseInner_[ss], TensorRemove(coarse_inner_[ss]));
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
 
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex> // deprecate
 | 
			
		||||
inline void blockInnerProduct(Lattice<CComplex> &CoarseInner,
 | 
			
		||||
			      const Lattice<vobj> &fineX,
 | 
			
		||||
			      const Lattice<vobj> &fineY)
 | 
			
		||||
@@ -227,15 +316,17 @@ inline void blockInnerProduct(Lattice<CComplex> &CoarseInner,
 | 
			
		||||
  Lattice<dotp> coarse_inner(coarse);
 | 
			
		||||
 | 
			
		||||
  // Precision promotion?
 | 
			
		||||
  auto CoarseInner_  = CoarseInner.View();
 | 
			
		||||
  auto coarse_inner_ = coarse_inner.View();
 | 
			
		||||
 | 
			
		||||
  fine_inner = localInnerProduct(fineX,fineY);
 | 
			
		||||
  blockSum(coarse_inner,fine_inner);
 | 
			
		||||
  accelerator_for(ss, coarse->oSites(), 1, {
 | 
			
		||||
    CoarseInner_[ss] = coarse_inner_[ss];
 | 
			
		||||
  });
 | 
			
		||||
  {
 | 
			
		||||
    autoView( CoarseInner_  , CoarseInner, AcceleratorWrite);
 | 
			
		||||
    autoView( coarse_inner_ , coarse_inner, AcceleratorRead);
 | 
			
		||||
    accelerator_for(ss, coarse->oSites(), 1, {
 | 
			
		||||
	CoarseInner_[ss] = coarse_inner_[ss];
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex>
 | 
			
		||||
inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX)
 | 
			
		||||
{
 | 
			
		||||
@@ -248,7 +339,7 @@ inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX)
 | 
			
		||||
// useful in multigrid project;
 | 
			
		||||
// Generic name : Coarsen?
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
 | 
			
		||||
inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData) 
 | 
			
		||||
{
 | 
			
		||||
  GridBase * fine  = fineData.Grid();
 | 
			
		||||
  GridBase * coarse= coarseData.Grid();
 | 
			
		||||
@@ -256,9 +347,9 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
 | 
			
		||||
  subdivides(coarse,fine); // require they map
 | 
			
		||||
 | 
			
		||||
  int _ndimension = coarse->_ndimension;
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  Coordinate  block_r      (_ndimension);
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  for(int d=0 ; d<_ndimension;d++){
 | 
			
		||||
    block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
 | 
			
		||||
  }
 | 
			
		||||
@@ -266,32 +357,36 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
 | 
			
		||||
 | 
			
		||||
  // Turn this around to loop threaded over sc and interior loop 
 | 
			
		||||
  // over sf would thread better
 | 
			
		||||
  auto coarseData_ = coarseData.View();
 | 
			
		||||
  auto fineData_   = fineData.View();
 | 
			
		||||
  autoView( coarseData_ , coarseData, AcceleratorWrite);
 | 
			
		||||
  autoView( fineData_   , fineData, AcceleratorRead);
 | 
			
		||||
 | 
			
		||||
  Coordinate fine_rdimensions = fine->_rdimensions;
 | 
			
		||||
  Coordinate coarse_rdimensions = coarse->_rdimensions;
 | 
			
		||||
  
 | 
			
		||||
  accelerator_for(sc,coarse->oSites(),1,{
 | 
			
		||||
 | 
			
		||||
    // One thread per sub block
 | 
			
		||||
    Coordinate coor_c(_ndimension);
 | 
			
		||||
    Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate
 | 
			
		||||
    coarseData_[sc]=Zero();
 | 
			
		||||
      // One thread per sub block
 | 
			
		||||
      Coordinate coor_c(_ndimension);
 | 
			
		||||
      Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions);  // Block coordinate
 | 
			
		||||
      coarseData_[sc]=Zero();
 | 
			
		||||
 | 
			
		||||
    for(int sb=0;sb<blockVol;sb++){
 | 
			
		||||
      
 | 
			
		||||
      int sf;
 | 
			
		||||
      Coordinate coor_b(_ndimension);
 | 
			
		||||
      Coordinate coor_f(_ndimension);
 | 
			
		||||
      Lexicographic::CoorFromIndex(coor_b,sb,block_r);               // Block sub coordinate
 | 
			
		||||
      for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
 | 
			
		||||
      Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions);
 | 
			
		||||
      for(int sb=0;sb<blockVol;sb++){
 | 
			
		||||
 | 
			
		||||
      coarseData_[sc]=coarseData_[sc]+fineData_[sf];
 | 
			
		||||
    }
 | 
			
		||||
	int sf;
 | 
			
		||||
	Coordinate coor_b(_ndimension);
 | 
			
		||||
	Coordinate coor_f(_ndimension);
 | 
			
		||||
	Lexicographic::CoorFromIndex(coor_b,sb,block_r);               // Block sub coordinate
 | 
			
		||||
	for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
 | 
			
		||||
	Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions);
 | 
			
		||||
 | 
			
		||||
  });
 | 
			
		||||
	coarseData_[sc]=coarseData_[sc]+fineData_[sf];
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
    });
 | 
			
		||||
  return;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vobj> &picked,Coordinate coor)
 | 
			
		||||
{
 | 
			
		||||
@@ -313,8 +408,8 @@ inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vob
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex>
 | 
			
		||||
inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis)
 | 
			
		||||
template<class CComplex,class VLattice>
 | 
			
		||||
inline void blockOrthonormalize(Lattice<CComplex> &ip,VLattice &Basis)
 | 
			
		||||
{
 | 
			
		||||
  GridBase *coarse = ip.Grid();
 | 
			
		||||
  GridBase *fine   = Basis[0].Grid();
 | 
			
		||||
@@ -322,23 +417,30 @@ inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> >
 | 
			
		||||
  int       nbasis = Basis.size() ;
 | 
			
		||||
 | 
			
		||||
  // checks
 | 
			
		||||
  subdivides(coarse,fine); 
 | 
			
		||||
  subdivides(coarse,fine);
 | 
			
		||||
  for(int i=0;i<nbasis;i++){
 | 
			
		||||
    conformable(Basis[i].Grid(),fine);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  for(int v=0;v<nbasis;v++) {
 | 
			
		||||
    for(int u=0;u<v;u++) {
 | 
			
		||||
      //Inner product & remove component 
 | 
			
		||||
      blockInnerProduct(ip,Basis[u],Basis[v]);
 | 
			
		||||
      //Inner product & remove component
 | 
			
		||||
      blockInnerProductD(ip,Basis[u],Basis[v]);
 | 
			
		||||
      ip = -ip;
 | 
			
		||||
      blockZAXPY<vobj,CComplex> (Basis[v],ip,Basis[u],Basis[v]);
 | 
			
		||||
      blockZAXPY(Basis[v],ip,Basis[u],Basis[v]);
 | 
			
		||||
    }
 | 
			
		||||
    blockNormalise(ip,Basis[v]);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
template<class vobj,class CComplex>
 | 
			
		||||
inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) // deprecated inaccurate naming
 | 
			
		||||
{
 | 
			
		||||
  blockOrthonormalize(ip,Basis);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
#if 0
 | 
			
		||||
// TODO: CPU optimized version here
 | 
			
		||||
template<class vobj,class CComplex,int nbasis>
 | 
			
		||||
inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
			 Lattice<vobj>   &fineData,
 | 
			
		||||
@@ -360,8 +462,8 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
  for(int d=0 ; d<_ndimension;d++){
 | 
			
		||||
    block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
 | 
			
		||||
  }
 | 
			
		||||
  auto fineData_   = fineData.View();
 | 
			
		||||
  auto coarseData_ = coarseData.View();
 | 
			
		||||
  autoView( fineData_   , fineData, AcceleratorWrite);
 | 
			
		||||
  autoView( coarseData_ , coarseData, AcceleratorRead);
 | 
			
		||||
 | 
			
		||||
  // Loop with a cache friendly loop ordering
 | 
			
		||||
  accelerator_for(sf,fine->oSites(),1,{
 | 
			
		||||
@@ -374,7 +476,7 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
    Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions);
 | 
			
		||||
 | 
			
		||||
    for(int i=0;i<nbasis;i++) {
 | 
			
		||||
      auto basis_ = Basis[i].View();
 | 
			
		||||
      /*      auto basis_ = Basis[i],  );*/
 | 
			
		||||
      if(i==0) fineData_[sf]=coarseData_[sc](i) *basis_[sf]);
 | 
			
		||||
      else     fineData_[sf]=fineData_[sf]+coarseData_[sc](i)*basis_[sf]);
 | 
			
		||||
    }
 | 
			
		||||
@@ -383,24 +485,25 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
  
 | 
			
		||||
}
 | 
			
		||||
#else
 | 
			
		||||
template<class vobj,class CComplex,int nbasis>
 | 
			
		||||
template<class vobj,class CComplex,int nbasis,class VLattice>
 | 
			
		||||
inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
 | 
			
		||||
			 Lattice<vobj>   &fineData,
 | 
			
		||||
			 const std::vector<Lattice<vobj> > &Basis)
 | 
			
		||||
			 const VLattice &Basis)
 | 
			
		||||
{
 | 
			
		||||
  GridBase * fine  = fineData.Grid();
 | 
			
		||||
  GridBase * coarse= coarseData.Grid();
 | 
			
		||||
 | 
			
		||||
  fineData=Zero();
 | 
			
		||||
  for(int i=0;i<nbasis;i++) {
 | 
			
		||||
    Lattice<iScalar<CComplex> > ip = PeekIndex<0>(coarseData,i);
 | 
			
		||||
    Lattice<CComplex> cip(coarse);
 | 
			
		||||
    auto cip_ = cip.View();
 | 
			
		||||
    auto  ip_ =  ip.View();
 | 
			
		||||
    accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{
 | 
			
		||||
	coalescedWrite(cip_[sc], ip_(sc)());
 | 
			
		||||
    });
 | 
			
		||||
    blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData);
 | 
			
		||||
 | 
			
		||||
    //Lattice<CComplex> cip(coarse);
 | 
			
		||||
    //autoView( cip_ , cip, AcceleratorWrite);
 | 
			
		||||
    //autoView(  ip_ ,  ip, AcceleratorRead);
 | 
			
		||||
    //accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{
 | 
			
		||||
    //	coalescedWrite(cip_[sc], ip_(sc)());
 | 
			
		||||
    //  });
 | 
			
		||||
    //blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData);
 | 
			
		||||
    blockZAXPY(fineData,ip,Basis[i],fineData);
 | 
			
		||||
  }
 | 
			
		||||
}
 | 
			
		||||
#endif
 | 
			
		||||
@@ -427,15 +530,17 @@ void localConvert(const Lattice<vobj> &in,Lattice<vvobj> &out)
 | 
			
		||||
    assert(ig->lSites() == og->lSites());
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  autoView(in_v,in,CpuRead);
 | 
			
		||||
  autoView(out_v,out,CpuWrite);
 | 
			
		||||
  thread_for(idx, ig->lSites(),{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    ssobj ss;
 | 
			
		||||
 | 
			
		||||
    Coordinate lcoor(ni);
 | 
			
		||||
    ig->LocalIndexToLocalCoor(idx,lcoor);
 | 
			
		||||
    peekLocalSite(s,in,lcoor);
 | 
			
		||||
    peekLocalSite(s,in_v,lcoor);
 | 
			
		||||
    ss=s;
 | 
			
		||||
    pokeLocalSite(ss,out,lcoor);
 | 
			
		||||
    pokeLocalSite(ss,out_v,lcoor);
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
@@ -470,8 +575,9 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro
 | 
			
		||||
  Coordinate rdt = Tg->_rdimensions;
 | 
			
		||||
  Coordinate ist = Tg->_istride;
 | 
			
		||||
  Coordinate ost = Tg->_ostride;
 | 
			
		||||
  auto t_v = To.View();
 | 
			
		||||
  auto f_v = From.View();
 | 
			
		||||
 | 
			
		||||
  autoView( t_v , To, AcceleratorWrite);
 | 
			
		||||
  autoView( f_v , From, AcceleratorRead);
 | 
			
		||||
  accelerator_for(idx,Fg->lSites(),1,{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    Coordinate Fcoor(nd);
 | 
			
		||||
@@ -494,8 +600,6 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro
 | 
			
		||||
      for(int w=0;w<words;w++){
 | 
			
		||||
	tp[idx_t+w*Nsimd] = fp[idx_f+w*Nsimd];  // FIXME IF RRII layout, type pun no worke
 | 
			
		||||
      }
 | 
			
		||||
      //      peekLocalSite(s,From,Fcoor);
 | 
			
		||||
      //      pokeLocalSite(s,To  ,Tcoor);
 | 
			
		||||
    }
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
@@ -526,6 +630,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // the above should guarantee that the operations are local
 | 
			
		||||
  autoView(lowDimv,lowDim,CpuRead);
 | 
			
		||||
  autoView(higherDimv,higherDim,CpuWrite);
 | 
			
		||||
  thread_for(idx,lg->lSites(),{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    Coordinate lcoor(nl);
 | 
			
		||||
@@ -538,8 +644,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice
 | 
			
		||||
	hcoor[d]=lcoor[ddl++];
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
    peekLocalSite(s,lowDim,lcoor);
 | 
			
		||||
    pokeLocalSite(s,higherDim,hcoor);
 | 
			
		||||
    peekLocalSite(s,lowDimv,lcoor);
 | 
			
		||||
    pokeLocalSite(s,higherDimv,hcoor);
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
@@ -567,6 +673,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
  // the above should guarantee that the operations are local
 | 
			
		||||
  autoView(lowDimv,lowDim,CpuWrite);
 | 
			
		||||
  autoView(higherDimv,higherDim,CpuRead);
 | 
			
		||||
  thread_for(idx,lg->lSites(),{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    Coordinate lcoor(nl);
 | 
			
		||||
@@ -579,8 +687,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic
 | 
			
		||||
	hcoor[d]=lcoor[ddl++];
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
    peekLocalSite(s,higherDim,hcoor);
 | 
			
		||||
    pokeLocalSite(s,lowDim,lcoor);
 | 
			
		||||
    peekLocalSite(s,higherDimv,hcoor);
 | 
			
		||||
    pokeLocalSite(s,lowDimv,lcoor);
 | 
			
		||||
  });
 | 
			
		||||
 | 
			
		||||
}
 | 
			
		||||
@@ -608,6 +716,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // the above should guarantee that the operations are local
 | 
			
		||||
  autoView(lowDimv,lowDim,CpuRead);
 | 
			
		||||
  autoView(higherDimv,higherDim,CpuWrite);
 | 
			
		||||
  thread_for(idx,lg->lSites(),{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    Coordinate lcoor(nl);
 | 
			
		||||
@@ -616,8 +726,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int
 | 
			
		||||
    if( lcoor[orthog] == slice_lo ) { 
 | 
			
		||||
      hcoor=lcoor;
 | 
			
		||||
      hcoor[orthog] = slice_hi;
 | 
			
		||||
      peekLocalSite(s,lowDim,lcoor);
 | 
			
		||||
      pokeLocalSite(s,higherDim,hcoor);
 | 
			
		||||
      peekLocalSite(s,lowDimv,lcoor);
 | 
			
		||||
      pokeLocalSite(s,higherDimv,hcoor);
 | 
			
		||||
    }
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
@@ -645,6 +755,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // the above should guarantee that the operations are local
 | 
			
		||||
  autoView(lowDimv,lowDim,CpuWrite);
 | 
			
		||||
  autoView(higherDimv,higherDim,CpuRead);
 | 
			
		||||
  thread_for(idx,lg->lSites(),{
 | 
			
		||||
    sobj s;
 | 
			
		||||
    Coordinate lcoor(nl);
 | 
			
		||||
@@ -653,8 +765,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int
 | 
			
		||||
    if( lcoor[orthog] == slice_lo ) { 
 | 
			
		||||
      hcoor=lcoor;
 | 
			
		||||
      hcoor[orthog] = slice_hi;
 | 
			
		||||
      peekLocalSite(s,higherDim,hcoor);
 | 
			
		||||
      pokeLocalSite(s,lowDim,lcoor);
 | 
			
		||||
      peekLocalSite(s,higherDimv,hcoor);
 | 
			
		||||
      pokeLocalSite(s,lowDimv,lcoor);
 | 
			
		||||
    }
 | 
			
		||||
  });
 | 
			
		||||
}
 | 
			
		||||
@@ -718,7 +830,7 @@ unvectorizeToLexOrdArray(std::vector<sobj> &out, const Lattice<vobj> &in)
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  //loop over outer index
 | 
			
		||||
  auto in_v  = in.View();
 | 
			
		||||
  autoView( in_v  , in, CpuRead);
 | 
			
		||||
  thread_for(in_oidx,in_grid->oSites(),{
 | 
			
		||||
    //Assemble vector of pointers to output elements
 | 
			
		||||
    ExtractPointerArray<sobj> out_ptrs(in_nsimd);
 | 
			
		||||
@@ -811,7 +923,7 @@ vectorizeFromLexOrdArray( std::vector<sobj> &in, Lattice<vobj> &out)
 | 
			
		||||
    icoor[lane].resize(ndim);
 | 
			
		||||
    grid->iCoorFromIindex(icoor[lane],lane);
 | 
			
		||||
  }
 | 
			
		||||
  auto out_v = out.View();
 | 
			
		||||
  autoView( out_v , out, CpuWrite);
 | 
			
		||||
  thread_for(oidx, grid->oSites(),{
 | 
			
		||||
    //Assemble vector of pointers to output elements
 | 
			
		||||
    ExtractPointerArray<sobj> ptrs(nsimd);
 | 
			
		||||
@@ -914,7 +1026,7 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in)
 | 
			
		||||
  std::vector<SobjOut> in_slex_conv(in_grid->lSites());
 | 
			
		||||
  unvectorizeToLexOrdArray(in_slex_conv, in);
 | 
			
		||||
    
 | 
			
		||||
  auto out_v = out.View();
 | 
			
		||||
  autoView( out_v , out, CpuWrite);
 | 
			
		||||
  thread_for(out_oidx,out_grid->oSites(),{
 | 
			
		||||
    Coordinate out_ocoor(ndim);
 | 
			
		||||
    out_grid->oCoorFromOindex(out_ocoor, out_oidx);
 | 
			
		||||
 
 | 
			
		||||
@@ -38,17 +38,19 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Transpose
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
/*
 | 
			
		||||
template<class vobj>
 | 
			
		||||
inline Lattice<vobj> transpose(const Lattice<vobj> &lhs){
 | 
			
		||||
  Lattice<vobj> ret(lhs.Grid());
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret_v[ss], transpose(lhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
  return ret;
 | 
			
		||||
};
 | 
			
		||||
    
 | 
			
		||||
*/    
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Index level dependent transpose
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -56,8 +58,8 @@ template<int Index,class vobj>
 | 
			
		||||
inline auto TransposeIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(transposeIndex<Index>(vobj()))>
 | 
			
		||||
{
 | 
			
		||||
  Lattice<decltype(transposeIndex<Index>(vobj()))> ret(lhs.Grid());
 | 
			
		||||
  auto ret_v = ret.View();
 | 
			
		||||
  auto lhs_v = lhs.View();
 | 
			
		||||
  autoView( ret_v, ret, AcceleratorWrite);
 | 
			
		||||
  autoView( lhs_v, lhs, AcceleratorRead);
 | 
			
		||||
  accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret_v[ss] , transposeIndex<Index>(lhs_v(ss)));
 | 
			
		||||
  });
 | 
			
		||||
 
 | 
			
		||||
@@ -35,8 +35,8 @@ NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){
 | 
			
		||||
  Lattice<obj> ret_i(rhs_i.Grid());
 | 
			
		||||
  auto rhs = rhs_i.View();
 | 
			
		||||
  auto ret = ret_i.View();
 | 
			
		||||
  autoView( rhs, rhs_i, AcceleratorRead);
 | 
			
		||||
  autoView( ret, ret_i, AcceleratorWrite);
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  accelerator_for(ss,rhs.size(),1,{
 | 
			
		||||
      ret[ss]=pow(rhs[ss],y);
 | 
			
		||||
@@ -45,8 +45,8 @@ template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){
 | 
			
		||||
}
 | 
			
		||||
template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){
 | 
			
		||||
  Lattice<obj> ret_i(rhs_i.Grid());
 | 
			
		||||
  auto rhs = rhs_i.View();
 | 
			
		||||
  auto ret = ret_i.View();
 | 
			
		||||
  autoView( rhs , rhs_i, AcceleratorRead);
 | 
			
		||||
  autoView( ret , ret_i, AcceleratorWrite);
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  accelerator_for(ss,rhs.size(),obj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret[ss],mod(rhs(ss),y));
 | 
			
		||||
@@ -56,8 +56,8 @@ template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){
 | 
			
		||||
 | 
			
		||||
template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){
 | 
			
		||||
  Lattice<obj> ret_i(rhs_i.Grid());
 | 
			
		||||
  auto ret = ret_i.View();
 | 
			
		||||
  auto rhs = rhs_i.View();
 | 
			
		||||
  autoView( ret , ret_i, AcceleratorWrite);
 | 
			
		||||
  autoView( rhs , rhs_i, AcceleratorRead);
 | 
			
		||||
  ret.Checkerboard() = rhs_i.Checkerboard();
 | 
			
		||||
  accelerator_for(ss,rhs.size(),obj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret[ss],div(rhs(ss),y));
 | 
			
		||||
@@ -67,8 +67,8 @@ template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){
 | 
			
		||||
 | 
			
		||||
template<class obj> Lattice<obj> expMat(const Lattice<obj> &rhs_i, RealD alpha, Integer Nexp = DEFAULT_MAT_EXP){
 | 
			
		||||
  Lattice<obj> ret_i(rhs_i.Grid());
 | 
			
		||||
  auto rhs = rhs_i.View();
 | 
			
		||||
  auto ret = ret_i.View();
 | 
			
		||||
  autoView( rhs , rhs_i, AcceleratorRead);
 | 
			
		||||
  autoView( ret , ret_i, AcceleratorWrite);
 | 
			
		||||
  ret.Checkerboard() = rhs.Checkerboard();
 | 
			
		||||
  accelerator_for(ss,rhs.size(),obj::Nsimd(),{
 | 
			
		||||
    coalescedWrite(ret[ss],Exponentiate(rhs(ss),alpha, Nexp));
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										168
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										168
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,168 @@
 | 
			
		||||
#pragma once
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
// Base class which can be used by traits to pick up behaviour
 | 
			
		||||
///////////////////////////////////////////////////////////////////
 | 
			
		||||
class LatticeBase {};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Conformable checks; same instance of Grid required
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
void accelerator_inline conformable(GridBase *lhs,GridBase *rhs)
 | 
			
		||||
{
 | 
			
		||||
  assert(lhs == rhs);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Minimal base class containing only data valid to access from accelerator
 | 
			
		||||
// _odata will be a managed pointer in CUDA
 | 
			
		||||
////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Force access to lattice through a view object.
 | 
			
		||||
// prevents writing of code that will not offload to GPU, but perhaps annoyingly
 | 
			
		||||
// strict since host could could in principle direct access through the lattice object
 | 
			
		||||
// Need to decide programming model.
 | 
			
		||||
#define LATTICE_VIEW_STRICT
 | 
			
		||||
template<class vobj> class LatticeAccelerator : public LatticeBase
 | 
			
		||||
{
 | 
			
		||||
protected:
 | 
			
		||||
  //public:
 | 
			
		||||
  GridBase *_grid;
 | 
			
		||||
  int checkerboard;
 | 
			
		||||
  vobj     *_odata;    // A managed pointer
 | 
			
		||||
  uint64_t _odata_size;    
 | 
			
		||||
  ViewAdvise advise;
 | 
			
		||||
public:
 | 
			
		||||
  accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr), advise(AdviseDefault) { }; 
 | 
			
		||||
  accelerator_inline uint64_t oSites(void) const { return _odata_size; };
 | 
			
		||||
  accelerator_inline int  Checkerboard(void) const { return checkerboard; };
 | 
			
		||||
  accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view
 | 
			
		||||
  accelerator_inline ViewAdvise Advise(void) const { return advise; };
 | 
			
		||||
  accelerator_inline ViewAdvise &Advise(void) { return this->advise; }; // can assign advise on a container, not a view
 | 
			
		||||
  accelerator_inline void Conformable(GridBase * &grid) const
 | 
			
		||||
  { 
 | 
			
		||||
    if (grid) conformable(grid, _grid);
 | 
			
		||||
    else      grid = _grid;
 | 
			
		||||
  };
 | 
			
		||||
  // Host only
 | 
			
		||||
  GridBase * getGrid(void) const { return _grid; };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// A View class which provides accessor to the data.
 | 
			
		||||
// This will be safe to call from accelerator_for and is trivially copy constructible
 | 
			
		||||
// The copy constructor for this will need to be used by device lambda functions
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
template<class vobj> 
 | 
			
		||||
class LatticeView : public LatticeAccelerator<vobj>
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  // Rvalue
 | 
			
		||||
  ViewMode mode;
 | 
			
		||||
  void * cpu_ptr;
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
  accelerator_inline const typename vobj::scalar_object operator()(size_t i) const { 
 | 
			
		||||
    return coalescedRead(this->_odata[i]); 
 | 
			
		||||
  }
 | 
			
		||||
#else 
 | 
			
		||||
  accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; }
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
  accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; };
 | 
			
		||||
  accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; };
 | 
			
		||||
 | 
			
		||||
  accelerator_inline uint64_t begin(void) const { return 0;};
 | 
			
		||||
  accelerator_inline uint64_t end(void)   const { return this->_odata_size; };
 | 
			
		||||
  accelerator_inline uint64_t size(void)  const { return this->_odata_size; };
 | 
			
		||||
 | 
			
		||||
  LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me){}
 | 
			
		||||
  LatticeView(const LatticeView<vobj> &refer_to_me) = default; // Trivially copyable
 | 
			
		||||
  LatticeView(const LatticeAccelerator<vobj> &refer_to_me,ViewMode mode) : LatticeAccelerator<vobj> (refer_to_me)
 | 
			
		||||
  {
 | 
			
		||||
    this->ViewOpen(mode);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  // Host functions
 | 
			
		||||
  void ViewOpen(ViewMode mode)
 | 
			
		||||
  { // Translate the pointer, could save a copy. Could use a "Handle" and not save _odata originally in base
 | 
			
		||||
    //    std::cout << "View Open"<<std::hex<<this->_odata<<std::dec <<std::endl;
 | 
			
		||||
    this->cpu_ptr = (void *)this->_odata;
 | 
			
		||||
    this->mode    = mode;
 | 
			
		||||
    this->_odata  =(vobj *)
 | 
			
		||||
      MemoryManager::ViewOpen(this->cpu_ptr,
 | 
			
		||||
				this->_odata_size*sizeof(vobj),
 | 
			
		||||
				mode,
 | 
			
		||||
				this->advise);    
 | 
			
		||||
  }
 | 
			
		||||
  void ViewClose(void)
 | 
			
		||||
  { // Inform the manager
 | 
			
		||||
    //    std::cout << "View Close"<<std::hex<<this->cpu_ptr<<std::dec <<std::endl;
 | 
			
		||||
    MemoryManager::ViewClose(this->cpu_ptr,this->mode);    
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
// Little autoscope assister
 | 
			
		||||
template<class View> 
 | 
			
		||||
class ViewCloser
 | 
			
		||||
{
 | 
			
		||||
  View v;  // Take a copy of view and call view close when I go out of scope automatically
 | 
			
		||||
 public:
 | 
			
		||||
  ViewCloser(View &_v) : v(_v) {};
 | 
			
		||||
  ~ViewCloser() { v.ViewClose(); }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
#define autoView(l_v,l,mode)				\
 | 
			
		||||
	  auto l_v = l.View(mode);			\
 | 
			
		||||
	  ViewCloser<decltype(l_v)> _autoView##l_v(l_v);
 | 
			
		||||
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
// Lattice expression types used by ET to assemble the AST
 | 
			
		||||
// 
 | 
			
		||||
// Need to be able to detect code paths according to the whether a lattice object or not
 | 
			
		||||
// so introduce some trait type things
 | 
			
		||||
/////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
class LatticeExpressionBase {};
 | 
			
		||||
 | 
			
		||||
template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>;
 | 
			
		||||
template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >;
 | 
			
		||||
 | 
			
		||||
template<class T, bool isLattice> struct ViewMapBase { typedef T Type; };
 | 
			
		||||
template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; };
 | 
			
		||||
template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >;
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1>                           
 | 
			
		||||
class LatticeUnaryExpression : public  LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {};
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1, typename _T2>              
 | 
			
		||||
class LatticeBinaryExpression : public LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  typedef typename ViewMap<_T2>::Type T2;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  T2 arg2;
 | 
			
		||||
  LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {};
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <typename Op, typename _T1, typename _T2, typename _T3> 
 | 
			
		||||
class LatticeTrinaryExpression : public LatticeExpressionBase 
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  typedef typename ViewMap<_T1>::Type T1;
 | 
			
		||||
  typedef typename ViewMap<_T2>::Type T2;
 | 
			
		||||
  typedef typename ViewMap<_T3>::Type T3;
 | 
			
		||||
  Op op;
 | 
			
		||||
  T1 arg1;
 | 
			
		||||
  T2 arg2;
 | 
			
		||||
  T3 arg3;
 | 
			
		||||
  LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {};
 | 
			
		||||
};
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
@@ -130,6 +130,8 @@ public:
 | 
			
		||||
  friend std::ostream& operator<< (std::ostream& stream, Logger& log){
 | 
			
		||||
 | 
			
		||||
    if ( log.active ) {
 | 
			
		||||
      std::ios_base::fmtflags f(stream.flags());
 | 
			
		||||
 | 
			
		||||
      stream << log.background()<<  std::left;
 | 
			
		||||
      if (log.topWidth > 0)
 | 
			
		||||
      {
 | 
			
		||||
@@ -152,6 +154,8 @@ public:
 | 
			
		||||
	       << now	       << log.background() << " : " ;
 | 
			
		||||
      }
 | 
			
		||||
      stream << log.colour();
 | 
			
		||||
      stream.flags(f);
 | 
			
		||||
 | 
			
		||||
      return stream;
 | 
			
		||||
    } else { 
 | 
			
		||||
      return devnull;
 | 
			
		||||
 
 | 
			
		||||
@@ -1,3 +1,4 @@
 | 
			
		||||
#include <Grid/GridCore.h>
 | 
			
		||||
 | 
			
		||||
int Grid::BinaryIO::latticeWriteMaxRetry = -1;
 | 
			
		||||
int                    Grid::BinaryIO::latticeWriteMaxRetry = -1;
 | 
			
		||||
Grid::BinaryIO::IoPerf Grid::BinaryIO::lastPerf;
 | 
			
		||||
 
 | 
			
		||||
@@ -79,6 +79,13 @@ inline void removeWhitespace(std::string &key)
 | 
			
		||||
///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
class BinaryIO {
 | 
			
		||||
 public:
 | 
			
		||||
  struct IoPerf
 | 
			
		||||
  {
 | 
			
		||||
    uint64_t size{0},time{0};
 | 
			
		||||
    double   mbytesPerSecond{0.};
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
  static IoPerf lastPerf;
 | 
			
		||||
  static int latticeWriteMaxRetry;
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -341,7 +348,7 @@ class BinaryIO {
 | 
			
		||||
    int ieee32big = (format == std::string("IEEE32BIG"));
 | 
			
		||||
    int ieee32    = (format == std::string("IEEE32"));
 | 
			
		||||
    int ieee64big = (format == std::string("IEEE64BIG"));
 | 
			
		||||
    int ieee64    = (format == std::string("IEEE64"));
 | 
			
		||||
    int ieee64    = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE"));
 | 
			
		||||
    assert(ieee64||ieee32|ieee64big||ieee32big);
 | 
			
		||||
    assert((ieee64+ieee32+ieee64big+ieee32big)==1);
 | 
			
		||||
    //////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
@@ -502,12 +509,15 @@ class BinaryIO {
 | 
			
		||||
      timer.Stop();
 | 
			
		||||
    }
 | 
			
		||||
    
 | 
			
		||||
    lastPerf.size            = sizeof(fobj)*iodata.size()*nrank;
 | 
			
		||||
    lastPerf.time            = timer.useconds();
 | 
			
		||||
    lastPerf.mbytesPerSecond = lastPerf.size/1024./1024./(lastPerf.time/1.0e6);
 | 
			
		||||
    std::cout<<GridLogMessage<<"IOobject: ";
 | 
			
		||||
    if ( control & BINARYIO_READ) std::cout << " read  ";
 | 
			
		||||
    else                          std::cout << " write ";
 | 
			
		||||
    uint64_t bytes = sizeof(fobj)*iodata.size()*nrank;
 | 
			
		||||
    std::cout<< bytes <<" bytes in "<<timer.Elapsed() <<" "
 | 
			
		||||
	     << (double)bytes/ (double)timer.useconds() <<" MB/s "<<std::endl;
 | 
			
		||||
    std::cout<< lastPerf.size <<" bytes in "<< timer.Elapsed() <<" "
 | 
			
		||||
	     << lastPerf.mbytesPerSecond <<" MB/s "<<std::endl;
 | 
			
		||||
 | 
			
		||||
    std::cout<<GridLogMessage<<"IOobject: endian and checksum overhead "<<bstimer.Elapsed()  <<std::endl;
 | 
			
		||||
 | 
			
		||||
@@ -663,10 +673,15 @@ class BinaryIO {
 | 
			
		||||
	     nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
 | 
			
		||||
    timer.Start();
 | 
			
		||||
    thread_for(lidx,lsites,{
 | 
			
		||||
    thread_for(lidx,lsites,{  // FIX ME, suboptimal implementation
 | 
			
		||||
      std::vector<RngStateType> tmp(RngStateCount);
 | 
			
		||||
      std::copy(iodata[lidx].begin(),iodata[lidx].end(),tmp.begin());
 | 
			
		||||
      parallel_rng.SetState(tmp,lidx);
 | 
			
		||||
      Coordinate lcoor;
 | 
			
		||||
      grid->LocalIndexToLocalCoor(lidx, lcoor);
 | 
			
		||||
      int o_idx=grid->oIndex(lcoor);
 | 
			
		||||
      int i_idx=grid->iIndex(lcoor);
 | 
			
		||||
      int gidx=parallel_rng.generator_idx(o_idx,i_idx);
 | 
			
		||||
      parallel_rng.SetState(tmp,gidx);
 | 
			
		||||
      });
 | 
			
		||||
    timer.Stop();
 | 
			
		||||
 | 
			
		||||
@@ -723,7 +738,12 @@ class BinaryIO {
 | 
			
		||||
    std::vector<RNGstate> iodata(lsites);
 | 
			
		||||
    thread_for(lidx,lsites,{
 | 
			
		||||
      std::vector<RngStateType> tmp(RngStateCount);
 | 
			
		||||
      parallel_rng.GetState(tmp,lidx);
 | 
			
		||||
      Coordinate lcoor;
 | 
			
		||||
      grid->LocalIndexToLocalCoor(lidx, lcoor);
 | 
			
		||||
      int o_idx=grid->oIndex(lcoor);
 | 
			
		||||
      int i_idx=grid->iIndex(lcoor);
 | 
			
		||||
      int gidx=parallel_rng.generator_idx(o_idx,i_idx);
 | 
			
		||||
      parallel_rng.GetState(tmp,gidx);
 | 
			
		||||
      std::copy(tmp.begin(),tmp.end(),iodata[lidx].begin());
 | 
			
		||||
    });
 | 
			
		||||
    timer.Stop();
 | 
			
		||||
 
 | 
			
		||||
@@ -123,7 +123,7 @@ assert(GRID_FIELD_NORM_CALC(FieldNormMetaData_, n2ck) < 1.0e-5);
 | 
			
		||||
 ////////////////////////////////////////////////////////////
 | 
			
		||||
 // Helper to fill out metadata
 | 
			
		||||
 ////////////////////////////////////////////////////////////
 | 
			
		||||
 template<class vobj> void ScidacMetaData(Lattice<vobj> & field,
 | 
			
		||||
template<class vobj> void ScidacMetaData(Lattice<vobj> & field,
 | 
			
		||||
					  FieldMetaData &header,
 | 
			
		||||
					  scidacRecord & _scidacRecord,
 | 
			
		||||
					  scidacFile   & _scidacFile) 
 | 
			
		||||
@@ -619,12 +619,12 @@ class IldgWriter : public ScidacWriter {
 | 
			
		||||
  // Don't require scidac records EXCEPT checksum
 | 
			
		||||
  // Use Grid MetaData object if present.
 | 
			
		||||
  ////////////////////////////////////////////////////////////////
 | 
			
		||||
  template <class vsimd>
 | 
			
		||||
  void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,int sequence,std::string LFN,std::string description) 
 | 
			
		||||
  template <class stats = PeriodicGaugeStatistics>
 | 
			
		||||
  void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,int sequence,std::string LFN,std::string description) 
 | 
			
		||||
  {
 | 
			
		||||
    GridBase * grid = Umu.Grid();
 | 
			
		||||
    typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
 | 
			
		||||
    typedef iLorentzColourMatrix<vsimd> vobj;
 | 
			
		||||
    typedef Lattice<vLorentzColourMatrixD> GaugeField;
 | 
			
		||||
    typedef vLorentzColourMatrixD vobj;
 | 
			
		||||
    typedef typename vobj::scalar_object sobj;
 | 
			
		||||
 | 
			
		||||
    ////////////////////////////////////////
 | 
			
		||||
@@ -636,6 +636,9 @@ class IldgWriter : public ScidacWriter {
 | 
			
		||||
 | 
			
		||||
    ScidacMetaData(Umu,header,_scidacRecord,_scidacFile);
 | 
			
		||||
 | 
			
		||||
    stats Stats;
 | 
			
		||||
    Stats(Umu,header);
 | 
			
		||||
    
 | 
			
		||||
    std::string format = header.floating_point;
 | 
			
		||||
    header.ensemble_id    = description;
 | 
			
		||||
    header.ensemble_label = description;
 | 
			
		||||
@@ -705,10 +708,10 @@ class IldgReader : public GridLimeReader {
 | 
			
		||||
  // Else use ILDG MetaData object if present.
 | 
			
		||||
  // Else use SciDAC MetaData object if present.
 | 
			
		||||
  ////////////////////////////////////////////////////////////////
 | 
			
		||||
  template <class vsimd>
 | 
			
		||||
  void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, FieldMetaData &FieldMetaData_) {
 | 
			
		||||
  template <class stats = PeriodicGaugeStatistics>
 | 
			
		||||
  void readConfiguration(Lattice<vLorentzColourMatrixD> &Umu, FieldMetaData &FieldMetaData_) {
 | 
			
		||||
 | 
			
		||||
    typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
 | 
			
		||||
    typedef Lattice<vLorentzColourMatrixD > GaugeField;
 | 
			
		||||
    typedef typename GaugeField::vector_object  vobj;
 | 
			
		||||
    typedef typename vobj::scalar_object sobj;
 | 
			
		||||
 | 
			
		||||
@@ -921,7 +924,8 @@ class IldgReader : public GridLimeReader {
 | 
			
		||||
 | 
			
		||||
    if ( found_FieldMetaData || found_usqcdInfo ) {
 | 
			
		||||
      FieldMetaData checker;
 | 
			
		||||
      GaugeStatistics(Umu,checker);
 | 
			
		||||
      stats Stats;
 | 
			
		||||
      Stats(Umu,checker);
 | 
			
		||||
      assert(fabs(checker.plaquette  - FieldMetaData_.plaquette )<1.0e-5);
 | 
			
		||||
      assert(fabs(checker.link_trace - FieldMetaData_.link_trace)<1.0e-5);
 | 
			
		||||
      std::cout << GridLogMessage<<"Plaquette and link trace match " << std::endl;
 | 
			
		||||
 
 | 
			
		||||
@@ -176,29 +176,18 @@ template<class vobj> inline void PrepareMetaData(Lattice<vobj> & field, FieldMet
 | 
			
		||||
  GridMetaData(grid,header); 
 | 
			
		||||
  MachineCharacteristics(header);
 | 
			
		||||
}
 | 
			
		||||
inline void GaugeStatistics(Lattice<vLorentzColourMatrixF> & data,FieldMetaData &header)
 | 
			
		||||
template<class Impl>
 | 
			
		||||
class GaugeStatistics
 | 
			
		||||
{
 | 
			
		||||
  // How to convert data precision etc...
 | 
			
		||||
  header.link_trace=WilsonLoops<PeriodicGimplF>::linkTrace(data);
 | 
			
		||||
  header.plaquette =WilsonLoops<PeriodicGimplF>::avgPlaquette(data);
 | 
			
		||||
}
 | 
			
		||||
inline void GaugeStatistics(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header)
 | 
			
		||||
{
 | 
			
		||||
  // How to convert data precision etc...
 | 
			
		||||
  header.link_trace=WilsonLoops<PeriodicGimplD>::linkTrace(data);
 | 
			
		||||
  header.plaquette =WilsonLoops<PeriodicGimplD>::avgPlaquette(data);
 | 
			
		||||
}
 | 
			
		||||
template<> inline void PrepareMetaData<vLorentzColourMatrixF>(Lattice<vLorentzColourMatrixF> & field, FieldMetaData &header)
 | 
			
		||||
{
 | 
			
		||||
   
 | 
			
		||||
  GridBase *grid = field.Grid();
 | 
			
		||||
  std::string format = getFormatString<vLorentzColourMatrixF>();
 | 
			
		||||
  header.floating_point = format;
 | 
			
		||||
  header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac
 | 
			
		||||
  GridMetaData(grid,header); 
 | 
			
		||||
  GaugeStatistics(field,header);
 | 
			
		||||
  MachineCharacteristics(header);
 | 
			
		||||
}
 | 
			
		||||
public:
 | 
			
		||||
  void operator()(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header)
 | 
			
		||||
  {
 | 
			
		||||
    header.link_trace=WilsonLoops<Impl>::linkTrace(data);
 | 
			
		||||
    header.plaquette =WilsonLoops<Impl>::avgPlaquette(data);
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
typedef GaugeStatistics<PeriodicGimplD> PeriodicGaugeStatistics;
 | 
			
		||||
typedef GaugeStatistics<ConjugateGimplD> ConjugateGaugeStatistics;
 | 
			
		||||
template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzColourMatrixD> & field, FieldMetaData &header)
 | 
			
		||||
{
 | 
			
		||||
  GridBase *grid = field.Grid();
 | 
			
		||||
@@ -206,7 +195,6 @@ template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzCo
 | 
			
		||||
  header.floating_point = format;
 | 
			
		||||
  header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac
 | 
			
		||||
  GridMetaData(grid,header); 
 | 
			
		||||
  GaugeStatistics(field,header);
 | 
			
		||||
  MachineCharacteristics(header);
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
@@ -301,6 +289,30 @@ struct GaugeSimpleUnmunger {
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class fobj,class sobj>
 | 
			
		||||
struct GaugeDoubleStoredMunger{
 | 
			
		||||
  void operator()(fobj &in, sobj &out) {
 | 
			
		||||
    for (int mu = 0; mu < Nds; mu++) {
 | 
			
		||||
      for (int i = 0; i < Nc; i++) {
 | 
			
		||||
        for (int j = 0; j < Nc; j++) {
 | 
			
		||||
          out(mu)()(i, j) = in(mu)()(i, j);
 | 
			
		||||
        }}
 | 
			
		||||
    }
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <class fobj, class sobj>
 | 
			
		||||
struct GaugeDoubleStoredUnmunger {
 | 
			
		||||
  void operator()(sobj &in, fobj &out) {
 | 
			
		||||
    for (int mu = 0; mu < Nds; mu++) {
 | 
			
		||||
      for (int i = 0; i < Nc; i++) {
 | 
			
		||||
        for (int j = 0; j < Nc; j++) {
 | 
			
		||||
          out(mu)()(i, j) = in(mu)()(i, j);
 | 
			
		||||
        }}
 | 
			
		||||
    }
 | 
			
		||||
  };
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class fobj,class sobj>
 | 
			
		||||
struct Gauge3x2munger{
 | 
			
		||||
  void operator() (fobj &in,sobj &out){
 | 
			
		||||
 
 | 
			
		||||
@@ -40,6 +40,8 @@ using namespace Grid;
 | 
			
		||||
class NerscIO : public BinaryIO { 
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  typedef Lattice<vLorentzColourMatrixD> GaugeField;
 | 
			
		||||
 | 
			
		||||
  static inline void truncate(std::string file){
 | 
			
		||||
    std::ofstream fout(file,std::ios::out);
 | 
			
		||||
  }
 | 
			
		||||
@@ -129,12 +131,12 @@ public:
 | 
			
		||||
  // Now the meat: the object readers
 | 
			
		||||
  /////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,
 | 
			
		||||
  template<class GaugeStats=PeriodicGaugeStatistics>
 | 
			
		||||
  static inline void readConfiguration(GaugeField &Umu,
 | 
			
		||||
				       FieldMetaData& header,
 | 
			
		||||
				       std::string file)
 | 
			
		||||
				       std::string file,
 | 
			
		||||
				       GaugeStats GaugeStatisticsCalculator=GaugeStats())
 | 
			
		||||
  {
 | 
			
		||||
    typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
 | 
			
		||||
 | 
			
		||||
    GridBase *grid = Umu.Grid();
 | 
			
		||||
    uint64_t offset = readHeader(file,Umu.Grid(),header);
 | 
			
		||||
@@ -146,30 +148,30 @@ public:
 | 
			
		||||
    int ieee32big = (format == std::string("IEEE32BIG"));
 | 
			
		||||
    int ieee32    = (format == std::string("IEEE32"));
 | 
			
		||||
    int ieee64big = (format == std::string("IEEE64BIG"));
 | 
			
		||||
    int ieee64    = (format == std::string("IEEE64"));
 | 
			
		||||
    int ieee64    = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE"));
 | 
			
		||||
 | 
			
		||||
    uint32_t nersc_csum,scidac_csuma,scidac_csumb;
 | 
			
		||||
    // depending on datatype, set up munger;
 | 
			
		||||
    // munger is a function of <floating point, Real, data_type>
 | 
			
		||||
    if ( header.data_type == std::string("4D_SU3_GAUGE") ) {
 | 
			
		||||
      if ( ieee32 || ieee32big ) {
 | 
			
		||||
	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3F> 
 | 
			
		||||
	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3F> 
 | 
			
		||||
	  (Umu,file,Gauge3x2munger<LorentzColour2x3F,LorentzColourMatrix>(), offset,format,
 | 
			
		||||
	   nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
      }
 | 
			
		||||
      if ( ieee64 || ieee64big ) {
 | 
			
		||||
	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3D> 
 | 
			
		||||
	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3D> 
 | 
			
		||||
	  (Umu,file,Gauge3x2munger<LorentzColour2x3D,LorentzColourMatrix>(),offset,format,
 | 
			
		||||
	   nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
      }
 | 
			
		||||
    } else if ( header.data_type == std::string("4D_SU3_GAUGE_3x3") ) {
 | 
			
		||||
      if ( ieee32 || ieee32big ) {
 | 
			
		||||
	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixF>
 | 
			
		||||
	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixF>
 | 
			
		||||
	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixF,LorentzColourMatrix>(),offset,format,
 | 
			
		||||
	   nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
      }
 | 
			
		||||
      if ( ieee64 || ieee64big ) {
 | 
			
		||||
	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixD>
 | 
			
		||||
	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixD>
 | 
			
		||||
	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixD,LorentzColourMatrix>(),offset,format,
 | 
			
		||||
	   nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
      }
 | 
			
		||||
@@ -177,7 +179,7 @@ public:
 | 
			
		||||
      assert(0);
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    GaugeStatistics(Umu,clone);
 | 
			
		||||
    GaugeStats Stats; Stats(Umu,clone);
 | 
			
		||||
 | 
			
		||||
    std::cout<<GridLogMessage <<"NERSC Configuration "<<file<<" checksum "<<std::hex<<nersc_csum<< std::dec
 | 
			
		||||
	     <<" header   "<<std::hex<<header.checksum<<std::dec <<std::endl;
 | 
			
		||||
@@ -203,15 +205,13 @@ public:
 | 
			
		||||
    std::cout<<GridLogMessage <<"NERSC Configuration "<<file<< " and plaquette, link trace, and checksum agree"<<std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,
 | 
			
		||||
  template<class GaugeStats=PeriodicGaugeStatistics>
 | 
			
		||||
  static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,
 | 
			
		||||
					std::string file, 
 | 
			
		||||
					int two_row,
 | 
			
		||||
					int bits32)
 | 
			
		||||
  {
 | 
			
		||||
    typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
 | 
			
		||||
 | 
			
		||||
    typedef iLorentzColourMatrix<vsimd> vobj;
 | 
			
		||||
    typedef vLorentzColourMatrixD vobj;
 | 
			
		||||
    typedef typename vobj::scalar_object sobj;
 | 
			
		||||
 | 
			
		||||
    FieldMetaData header;
 | 
			
		||||
@@ -229,7 +229,7 @@ public:
 | 
			
		||||
 | 
			
		||||
    GridMetaData(grid,header);
 | 
			
		||||
    assert(header.nd==4);
 | 
			
		||||
    GaugeStatistics(Umu,header);
 | 
			
		||||
    GaugeStats Stats; Stats(Umu,header);
 | 
			
		||||
    MachineCharacteristics(header);
 | 
			
		||||
 | 
			
		||||
	uint64_t offset;
 | 
			
		||||
@@ -238,19 +238,19 @@ public:
 | 
			
		||||
    header.floating_point = std::string("IEEE64BIG");
 | 
			
		||||
    header.data_type      = std::string("4D_SU3_GAUGE_3x3");
 | 
			
		||||
    GaugeSimpleUnmunger<fobj3D,sobj> munge;
 | 
			
		||||
	if ( grid->IsBoss() ) { 
 | 
			
		||||
	  truncate(file);
 | 
			
		||||
    offset = writeHeader(header,file);
 | 
			
		||||
	}
 | 
			
		||||
	grid->Broadcast(0,(void *)&offset,sizeof(offset));
 | 
			
		||||
    if ( grid->IsBoss() ) { 
 | 
			
		||||
      truncate(file);
 | 
			
		||||
      offset = writeHeader(header,file);
 | 
			
		||||
    }
 | 
			
		||||
    grid->Broadcast(0,(void *)&offset,sizeof(offset));
 | 
			
		||||
 | 
			
		||||
    uint32_t nersc_csum,scidac_csuma,scidac_csumb;
 | 
			
		||||
    BinaryIO::writeLatticeObject<vobj,fobj3D>(Umu,file,munge,offset,header.floating_point,
 | 
			
		||||
					      nersc_csum,scidac_csuma,scidac_csumb);
 | 
			
		||||
    header.checksum = nersc_csum;
 | 
			
		||||
	if ( grid->IsBoss() ) { 
 | 
			
		||||
    writeHeader(header,file);
 | 
			
		||||
	}
 | 
			
		||||
    if ( grid->IsBoss() ) { 
 | 
			
		||||
      writeHeader(header,file);
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    std::cout<<GridLogMessage <<"Written NERSC Configuration on "<< file << " checksum "
 | 
			
		||||
	     <<std::hex<<header.checksum
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,224 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/parallelIO/OpenQcdIO.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015 - 2020
 | 
			
		||||
 | 
			
		||||
Author: Daniel Richtmann <daniel.richtmann@ur.de>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#pragma once
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
struct OpenQcdHeader : Serializable {
 | 
			
		||||
  GRID_SERIALIZABLE_CLASS_MEMBERS(OpenQcdHeader,
 | 
			
		||||
                                  int,    Nt,
 | 
			
		||||
                                  int,    Nx,
 | 
			
		||||
                                  int,    Ny,
 | 
			
		||||
                                  int,    Nz,
 | 
			
		||||
                                  double, plaq);
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
class OpenQcdIO : public BinaryIO {
 | 
			
		||||
public:
 | 
			
		||||
  static constexpr double normalisationFactor = Nc; // normalisation difference: grid 18, openqcd 6
 | 
			
		||||
 | 
			
		||||
  static inline int readHeader(std::string file, GridBase* grid, FieldMetaData& field) {
 | 
			
		||||
    OpenQcdHeader header;
 | 
			
		||||
 | 
			
		||||
    {
 | 
			
		||||
      std::ifstream fin(file, std::ios::in | std::ios::binary);
 | 
			
		||||
      fin.read(reinterpret_cast<char*>(&header), sizeof(OpenQcdHeader));
 | 
			
		||||
      assert(!fin.fail());
 | 
			
		||||
      field.data_start = fin.tellg();
 | 
			
		||||
      fin.close();
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    header.plaq /= normalisationFactor;
 | 
			
		||||
 | 
			
		||||
    // sanity check (should trigger on endian issues)
 | 
			
		||||
    assert(0 < header.Nt && header.Nt <= 1024);
 | 
			
		||||
    assert(0 < header.Nx && header.Nx <= 1024);
 | 
			
		||||
    assert(0 < header.Ny && header.Ny <= 1024);
 | 
			
		||||
    assert(0 < header.Nz && header.Nz <= 1024);
 | 
			
		||||
 | 
			
		||||
    field.dimension[0] = header.Nx;
 | 
			
		||||
    field.dimension[1] = header.Ny;
 | 
			
		||||
    field.dimension[2] = header.Nz;
 | 
			
		||||
    field.dimension[3] = header.Nt;
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogDebug << "header: " << header << std::endl;
 | 
			
		||||
    std::cout << GridLogDebug << "grid dimensions: " << grid->_fdimensions << std::endl;
 | 
			
		||||
    std::cout << GridLogDebug << "file dimensions: " << field.dimension << std::endl;
 | 
			
		||||
 | 
			
		||||
    assert(grid->_ndimension == Nd);
 | 
			
		||||
    for(int d = 0; d < Nd; d++)
 | 
			
		||||
      assert(grid->_fdimensions[d] == field.dimension[d]);
 | 
			
		||||
 | 
			
		||||
    field.plaquette = header.plaq;
 | 
			
		||||
 | 
			
		||||
    return field.data_start;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
 | 
			
		||||
                                       FieldMetaData&                        header,
 | 
			
		||||
                                       std::string                           file) {
 | 
			
		||||
    typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubleStoredGaugeField;
 | 
			
		||||
 | 
			
		||||
    assert(Ns == 4 and Nd == 4 and Nc == 3);
 | 
			
		||||
 | 
			
		||||
    auto grid = dynamic_cast<GridCartesian*>(Umu.Grid());
 | 
			
		||||
    assert(grid != nullptr); assert(grid->_ndimension == Nd);
 | 
			
		||||
 | 
			
		||||
    uint64_t offset = readHeader(file, Umu.Grid(), header);
 | 
			
		||||
 | 
			
		||||
    FieldMetaData clone(header);
 | 
			
		||||
 | 
			
		||||
    std::string format("IEEE64"); // they always store little endian double precsision
 | 
			
		||||
    uint32_t    nersc_csum, scidac_csuma, scidac_csumb;
 | 
			
		||||
 | 
			
		||||
    GridCartesian*         grid_openqcd = createOpenQcdGrid(grid);
 | 
			
		||||
    GridRedBlackCartesian* grid_rb      = SpaceTimeGrid::makeFourDimRedBlackGrid(grid);
 | 
			
		||||
 | 
			
		||||
    typedef DoubleStoredColourMatrixD                                              fobj;
 | 
			
		||||
    typedef typename DoubleStoredGaugeField::vector_object::scalar_object          sobj;
 | 
			
		||||
    typedef typename DoubleStoredGaugeField::vector_object::Realified::scalar_type word;
 | 
			
		||||
 | 
			
		||||
    word w = 0;
 | 
			
		||||
 | 
			
		||||
    std::vector<fobj> iodata(grid_openqcd->lSites()); // Munge, checksum, byte order in here
 | 
			
		||||
    std::vector<sobj> scalardata(grid->lSites());
 | 
			
		||||
 | 
			
		||||
    IOobject(w, grid_openqcd, iodata, file, offset, format, BINARYIO_READ | BINARYIO_LEXICOGRAPHIC,
 | 
			
		||||
             nersc_csum, scidac_csuma, scidac_csumb);
 | 
			
		||||
 | 
			
		||||
    GridStopWatch timer;
 | 
			
		||||
    timer.Start();
 | 
			
		||||
 | 
			
		||||
    DoubleStoredGaugeField Umu_ds(grid);
 | 
			
		||||
 | 
			
		||||
    auto munge = GaugeDoubleStoredMunger<DoubleStoredColourMatrixD, DoubleStoredColourMatrix>();
 | 
			
		||||
 | 
			
		||||
    Coordinate ldim = grid->LocalDimensions();
 | 
			
		||||
    thread_for(idx_g, grid->lSites(), {
 | 
			
		||||
        Coordinate coor;
 | 
			
		||||
        grid->LocalIndexToLocalCoor(idx_g, coor);
 | 
			
		||||
 | 
			
		||||
        bool isOdd = grid_rb->CheckerBoard(coor) == Odd;
 | 
			
		||||
 | 
			
		||||
        if(!isOdd) continue;
 | 
			
		||||
 | 
			
		||||
        int idx_o = (coor[Tdir] * ldim[Xdir] * ldim[Ydir] * ldim[Zdir]
 | 
			
		||||
                  +  coor[Xdir] * ldim[Ydir] * ldim[Zdir]
 | 
			
		||||
                  +  coor[Ydir] * ldim[Zdir]
 | 
			
		||||
                  +  coor[Zdir])/2;
 | 
			
		||||
 | 
			
		||||
        munge(iodata[idx_o], scalardata[idx_g]);
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
    grid->Barrier(); timer.Stop();
 | 
			
		||||
    std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: munge overhead " << timer.Elapsed() << std::endl;
 | 
			
		||||
 | 
			
		||||
    timer.Reset(); timer.Start();
 | 
			
		||||
 | 
			
		||||
    vectorizeFromLexOrdArray(scalardata, Umu_ds);
 | 
			
		||||
 | 
			
		||||
    grid->Barrier(); timer.Stop();
 | 
			
		||||
    std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: vectorize overhead " << timer.Elapsed() << std::endl;
 | 
			
		||||
 | 
			
		||||
    timer.Reset(); timer.Start();
 | 
			
		||||
 | 
			
		||||
    undoDoubleStore(Umu, Umu_ds);
 | 
			
		||||
 | 
			
		||||
    grid->Barrier(); timer.Stop();
 | 
			
		||||
    std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: redistribute overhead " << timer.Elapsed() << std::endl;
 | 
			
		||||
 | 
			
		||||
    PeriodicGaugeStatistics Stats; Stats(Umu, clone);
 | 
			
		||||
 | 
			
		||||
    RealD plaq_diff = fabs(clone.plaquette - header.plaquette);
 | 
			
		||||
 | 
			
		||||
    // clang-format off
 | 
			
		||||
    std::cout << GridLogMessage << "OpenQcd Configuration " << file
 | 
			
		||||
              << " plaquette " << clone.plaquette
 | 
			
		||||
              << " header " << header.plaquette
 | 
			
		||||
              << " difference " << plaq_diff
 | 
			
		||||
              << std::endl;
 | 
			
		||||
    // clang-format on
 | 
			
		||||
 | 
			
		||||
    RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15;
 | 
			
		||||
    RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code
 | 
			
		||||
 | 
			
		||||
    if(plaq_diff >= tol)
 | 
			
		||||
      std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl;
 | 
			
		||||
    assert(plaq_diff < tol);
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
 | 
			
		||||
                                        std::string                           file) {
 | 
			
		||||
    std::cout << GridLogError << "Writing to openQCD file format is not implemented" << std::endl;
 | 
			
		||||
    exit(EXIT_FAILURE);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
private:
 | 
			
		||||
  static inline GridCartesian* createOpenQcdGrid(GridCartesian* grid) {
 | 
			
		||||
    // exploit GridCartesian to be able to still use IOobject
 | 
			
		||||
    Coordinate gdim  = grid->GlobalDimensions();
 | 
			
		||||
    Coordinate ldim  = grid->LocalDimensions();
 | 
			
		||||
    Coordinate pcoor = grid->ThisProcessorCoor();
 | 
			
		||||
 | 
			
		||||
    // openqcd does rb on the z direction
 | 
			
		||||
    gdim[Zdir] /= 2;
 | 
			
		||||
    ldim[Zdir] /= 2;
 | 
			
		||||
 | 
			
		||||
    // and has the order T X Y Z (from slowest to fastest)
 | 
			
		||||
    std::swap(gdim[Xdir], gdim[Zdir]);
 | 
			
		||||
    std::swap(ldim[Xdir], ldim[Zdir]);
 | 
			
		||||
    std::swap(pcoor[Xdir], pcoor[Zdir]);
 | 
			
		||||
 | 
			
		||||
    GridCartesian* ret   = SpaceTimeGrid::makeFourDimGrid(gdim, grid->_simd_layout, grid->ProcessorGrid());
 | 
			
		||||
    ret->_ldimensions    = ldim;
 | 
			
		||||
    ret->_processor_coor = pcoor;
 | 
			
		||||
    return ret;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void undoDoubleStore(Lattice<iLorentzColourMatrix<vsimd>>&            Umu,
 | 
			
		||||
                                     Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) {
 | 
			
		||||
    conformable(Umu.Grid(), Umu_ds.Grid());
 | 
			
		||||
    Lattice<iColourMatrix<vsimd>> U(Umu.Grid());
 | 
			
		||||
 | 
			
		||||
    // they store T+, T-, X+, X-, Y+, Y-, Z+, Z-
 | 
			
		||||
    for(int mu_g = 0; mu_g < Nd; ++mu_g) {
 | 
			
		||||
      int mu_o = (mu_g + 1) % Nd;
 | 
			
		||||
      U        = PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o)
 | 
			
		||||
               + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o + 1), mu_g, +1);
 | 
			
		||||
      PokeIndex<LorentzIndex>(Umu, U, mu_g);
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
							
								
								
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,281 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/parallelIO/OpenQcdIOChromaReference.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015 - 2020
 | 
			
		||||
 | 
			
		||||
Author: Daniel Richtmann <daniel.richtmann@ur.de>
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
/*  END LEGAL */
 | 
			
		||||
#pragma once
 | 
			
		||||
 | 
			
		||||
#include <ios>
 | 
			
		||||
#include <iostream>
 | 
			
		||||
#include <limits>
 | 
			
		||||
#include <iomanip>
 | 
			
		||||
#include <mpi.h>
 | 
			
		||||
#include <ostream>
 | 
			
		||||
#include <string>
 | 
			
		||||
 | 
			
		||||
#define CHECK {std::cerr << __FILE__ << " @l " << __LINE__ << ": CHECK" << grid->ThisRank() << std::endl;}
 | 
			
		||||
#define CHECK_VAR(a)   { std::cerr << __FILE__ << "@l" << __LINE__ << " on "<< grid->ThisRank() << ": " << __func__ << " " << #a << "=" << (a) << std::endl; }
 | 
			
		||||
// #undef CHECK
 | 
			
		||||
// #define CHECK
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
class ParRdr {
 | 
			
		||||
private:
 | 
			
		||||
  bool const swap;
 | 
			
		||||
 | 
			
		||||
  MPI_Status status;
 | 
			
		||||
  MPI_File   fp;
 | 
			
		||||
 | 
			
		||||
  int err;
 | 
			
		||||
 | 
			
		||||
  MPI_Datatype oddSiteType;
 | 
			
		||||
  MPI_Datatype fileViewType;
 | 
			
		||||
 | 
			
		||||
  GridBase* grid;
 | 
			
		||||
 | 
			
		||||
public:
 | 
			
		||||
  ParRdr(MPI_Comm comm, std::string const& filename, GridBase* gridPtr)
 | 
			
		||||
    : swap(false)
 | 
			
		||||
    , grid(gridPtr) {
 | 
			
		||||
    err = MPI_File_open(comm, const_cast<char*>(filename.c_str()), MPI_MODE_RDONLY, MPI_INFO_NULL, &fp);
 | 
			
		||||
    assert(err == MPI_SUCCESS);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  virtual ~ParRdr() { MPI_File_close(&fp); }
 | 
			
		||||
 | 
			
		||||
  inline void errInfo(int const err, std::string const& func) {
 | 
			
		||||
    static char estring[MPI_MAX_ERROR_STRING];
 | 
			
		||||
    int         eclass = -1, len = 0;
 | 
			
		||||
    MPI_Error_class(err, &eclass);
 | 
			
		||||
    MPI_Error_string(err, estring, &len);
 | 
			
		||||
    std::cerr << func << " - Error " << eclass << ": " << estring << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  int readHeader(FieldMetaData& field) {
 | 
			
		||||
    assert((grid->_ndimension == Nd) && (Nd == 4));
 | 
			
		||||
    assert(Nc == 3);
 | 
			
		||||
 | 
			
		||||
    OpenQcdHeader header;
 | 
			
		||||
 | 
			
		||||
    readBlock(reinterpret_cast<char*>(&header), 0, sizeof(OpenQcdHeader), MPI_CHAR);
 | 
			
		||||
 | 
			
		||||
    header.plaq /= 3.; // TODO change this into normalizationfactor
 | 
			
		||||
 | 
			
		||||
    // sanity check (should trigger on endian issues) TODO remove?
 | 
			
		||||
    assert(0 < header.Nt && header.Nt <= 1024);
 | 
			
		||||
    assert(0 < header.Nx && header.Nx <= 1024);
 | 
			
		||||
    assert(0 < header.Ny && header.Ny <= 1024);
 | 
			
		||||
    assert(0 < header.Nz && header.Nz <= 1024);
 | 
			
		||||
 | 
			
		||||
    field.dimension[0] = header.Nx;
 | 
			
		||||
    field.dimension[1] = header.Ny;
 | 
			
		||||
    field.dimension[2] = header.Nz;
 | 
			
		||||
    field.dimension[3] = header.Nt;
 | 
			
		||||
 | 
			
		||||
    for(int d = 0; d < Nd; d++)
 | 
			
		||||
      assert(grid->FullDimensions()[d] == field.dimension[d]);
 | 
			
		||||
 | 
			
		||||
    field.plaquette = header.plaq;
 | 
			
		||||
 | 
			
		||||
    field.data_start = sizeof(OpenQcdHeader);
 | 
			
		||||
 | 
			
		||||
    return field.data_start;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void readBlock(void* const dest, uint64_t const pos, uint64_t const nbytes, MPI_Datatype const datatype) {
 | 
			
		||||
    err = MPI_File_read_at_all(fp, pos, dest, nbytes, datatype, &status);
 | 
			
		||||
    errInfo(err, "MPI_File_read_at_all");
 | 
			
		||||
    // CHECK_VAR(err)
 | 
			
		||||
 | 
			
		||||
    int read = -1;
 | 
			
		||||
    MPI_Get_count(&status, datatype, &read);
 | 
			
		||||
    // CHECK_VAR(read)
 | 
			
		||||
    assert(nbytes == (uint64_t)read);
 | 
			
		||||
    assert(err == MPI_SUCCESS);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void createTypes() {
 | 
			
		||||
    constexpr int elem_size = Nd * 2 * 2 * Nc * Nc * sizeof(double); // 2_complex 2_fwdbwd
 | 
			
		||||
 | 
			
		||||
    err = MPI_Type_contiguous(elem_size, MPI_BYTE, &oddSiteType); assert(err == MPI_SUCCESS);
 | 
			
		||||
    err = MPI_Type_commit(&oddSiteType); assert(err == MPI_SUCCESS);
 | 
			
		||||
 | 
			
		||||
    Coordinate const L = grid->GlobalDimensions();
 | 
			
		||||
    Coordinate const l = grid->LocalDimensions();
 | 
			
		||||
    Coordinate const i = grid->ThisProcessorCoor();
 | 
			
		||||
 | 
			
		||||
    Coordinate sizes({L[2] / 2, L[1], L[0], L[3]});
 | 
			
		||||
    Coordinate subsizes({l[2] / 2, l[1], l[0], l[3]});
 | 
			
		||||
    Coordinate starts({i[2] * l[2] / 2, i[1] * l[1], i[0] * l[0], i[3] * l[3]});
 | 
			
		||||
 | 
			
		||||
    err = MPI_Type_create_subarray(grid->_ndimension, &sizes[0], &subsizes[0], &starts[0], MPI_ORDER_FORTRAN, oddSiteType, &fileViewType); assert(err == MPI_SUCCESS);
 | 
			
		||||
    err = MPI_Type_commit(&fileViewType); assert(err == MPI_SUCCESS);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  void freeTypes() {
 | 
			
		||||
    err = MPI_Type_free(&fileViewType); assert(err == MPI_SUCCESS);
 | 
			
		||||
    err = MPI_Type_free(&oddSiteType); assert(err == MPI_SUCCESS);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  bool readGauge(std::vector<ColourMatrixD>& domain_buff, FieldMetaData& meta) {
 | 
			
		||||
    auto hdr_offset = readHeader(meta);
 | 
			
		||||
    CHECK
 | 
			
		||||
    createTypes();
 | 
			
		||||
    err = MPI_File_set_view(fp, hdr_offset, oddSiteType, fileViewType, "native", MPI_INFO_NULL); errInfo(err, "MPI_File_set_view0"); assert(err == MPI_SUCCESS);
 | 
			
		||||
    CHECK
 | 
			
		||||
    int const domainSites = grid->lSites();
 | 
			
		||||
    domain_buff.resize(Nd * domainSites); // 2_fwdbwd * 4_Nd * domainSites / 2_onlyodd
 | 
			
		||||
 | 
			
		||||
    // the actual READ
 | 
			
		||||
    constexpr uint64_t cm_size   = 2 * Nc * Nc * sizeof(double);    // 2_complex
 | 
			
		||||
    constexpr uint64_t os_size   = Nd * 2 * cm_size;                // 2_fwdbwd
 | 
			
		||||
    constexpr uint64_t max_elems = std::numeric_limits<int>::max(); // int adressable elems: floor is fine
 | 
			
		||||
    uint64_t const     n_os      = domainSites / 2;
 | 
			
		||||
 | 
			
		||||
    for(uint64_t os_idx = 0; os_idx < n_os;) {
 | 
			
		||||
      uint64_t const read_os = os_idx + max_elems <= n_os ? max_elems : n_os - os_idx;
 | 
			
		||||
      uint64_t const cm      = os_idx * Nd * 2;
 | 
			
		||||
      readBlock(&(domain_buff[cm]), os_idx, read_os, oddSiteType);
 | 
			
		||||
      os_idx += read_os;
 | 
			
		||||
    }
 | 
			
		||||
 | 
			
		||||
    CHECK
 | 
			
		||||
    err = MPI_File_set_view(fp, 0, MPI_BYTE, MPI_BYTE, "native", MPI_INFO_NULL);
 | 
			
		||||
  errInfo(err, "MPI_File_set_view1");
 | 
			
		||||
    assert(err == MPI_SUCCESS);
 | 
			
		||||
    freeTypes();
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogMessage << "read sum: " << n_os * os_size << " bytes" << std::endl;
 | 
			
		||||
    return true;
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
class OpenQcdIOChromaReference : public BinaryIO {
 | 
			
		||||
public:
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
 | 
			
		||||
                                       Grid::FieldMetaData&                  header,
 | 
			
		||||
                                       std::string                           file) {
 | 
			
		||||
    typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubledGaugeField;
 | 
			
		||||
 | 
			
		||||
    assert(Ns == 4 and Nd == 4 and Nc == 3);
 | 
			
		||||
 | 
			
		||||
    auto grid = Umu.Grid();
 | 
			
		||||
 | 
			
		||||
    typedef ColourMatrixD fobj;
 | 
			
		||||
 | 
			
		||||
    std::vector<fobj> iodata(
 | 
			
		||||
      Nd * grid->lSites()); // actual size = 2*Nd*lsites but have only lsites/2 sites in file
 | 
			
		||||
 | 
			
		||||
    {
 | 
			
		||||
      ParRdr rdr(MPI_COMM_WORLD, file, grid);
 | 
			
		||||
      rdr.readGauge(iodata, header);
 | 
			
		||||
    } // equivalent to using binaryio
 | 
			
		||||
 | 
			
		||||
    std::vector<iDoubleStoredColourMatrix<typename vsimd::scalar_type>> Umu_ds_scalar(grid->lSites());
 | 
			
		||||
 | 
			
		||||
    copyToLatticeObject(Umu_ds_scalar, iodata, grid); // equivalent to munging
 | 
			
		||||
 | 
			
		||||
    DoubledGaugeField Umu_ds(grid);
 | 
			
		||||
 | 
			
		||||
    vectorizeFromLexOrdArray(Umu_ds_scalar, Umu_ds);
 | 
			
		||||
 | 
			
		||||
    redistribute(Umu, Umu_ds); // equivalent to undoDoublestore
 | 
			
		||||
 | 
			
		||||
    FieldMetaData clone(header);
 | 
			
		||||
 | 
			
		||||
    PeriodicGaugeStatistics Stats; Stats(Umu, clone);
 | 
			
		||||
 | 
			
		||||
    RealD plaq_diff = fabs(clone.plaquette - header.plaquette);
 | 
			
		||||
 | 
			
		||||
    // clang-format off
 | 
			
		||||
    std::cout << GridLogMessage << "OpenQcd Configuration " << file
 | 
			
		||||
              << " plaquette " << clone.plaquette
 | 
			
		||||
              << " header " << header.plaquette
 | 
			
		||||
              << " difference " << plaq_diff
 | 
			
		||||
              << std::endl;
 | 
			
		||||
    // clang-format on
 | 
			
		||||
 | 
			
		||||
    RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15;
 | 
			
		||||
    RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code
 | 
			
		||||
 | 
			
		||||
    if(plaq_diff >= tol)
 | 
			
		||||
      std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl;
 | 
			
		||||
    assert(plaq_diff < tol);
 | 
			
		||||
 | 
			
		||||
    std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl;
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
private:
 | 
			
		||||
  template<class vsimd>
 | 
			
		||||
  static inline void redistribute(Lattice<iLorentzColourMatrix<vsimd>>&            Umu,
 | 
			
		||||
                                  Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) {
 | 
			
		||||
    Grid::conformable(Umu.Grid(), Umu_ds.Grid());
 | 
			
		||||
    Lattice<iColourMatrix<vsimd>> U(Umu.Grid());
 | 
			
		||||
 | 
			
		||||
    U = PeekIndex<LorentzIndex>(Umu_ds, 2) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 3), 0, +1); PokeIndex<LorentzIndex>(Umu, U, 0);
 | 
			
		||||
    U = PeekIndex<LorentzIndex>(Umu_ds, 4) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 5), 1, +1); PokeIndex<LorentzIndex>(Umu, U, 1);
 | 
			
		||||
    U = PeekIndex<LorentzIndex>(Umu_ds, 6) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 7), 2, +1); PokeIndex<LorentzIndex>(Umu, U, 2);
 | 
			
		||||
    U = PeekIndex<LorentzIndex>(Umu_ds, 0) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 1), 3, +1); PokeIndex<LorentzIndex>(Umu, U, 3);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  static inline void copyToLatticeObject(std::vector<DoubleStoredColourMatrix>& u_fb,
 | 
			
		||||
                                         std::vector<ColourMatrixD> const&      node_buff,
 | 
			
		||||
                                         GridBase*                              grid) {
 | 
			
		||||
    assert(node_buff.size() == Nd * grid->lSites());
 | 
			
		||||
 | 
			
		||||
    Coordinate const& l = grid->LocalDimensions();
 | 
			
		||||
 | 
			
		||||
    Coordinate coord(Nd);
 | 
			
		||||
    int&       x = coord[0];
 | 
			
		||||
    int&       y = coord[1];
 | 
			
		||||
    int&       z = coord[2];
 | 
			
		||||
    int&       t = coord[3];
 | 
			
		||||
 | 
			
		||||
    int buff_idx = 0;
 | 
			
		||||
    for(t = 0; t < l[3]; ++t) // IMPORTANT: openQCD file ordering
 | 
			
		||||
      for(x = 0; x < l[0]; ++x)
 | 
			
		||||
        for(y = 0; y < l[1]; ++y)
 | 
			
		||||
          for(z = 0; z < l[2]; ++z) {
 | 
			
		||||
            if((t + z + y + x) % 2 == 0) continue;
 | 
			
		||||
 | 
			
		||||
            int local_idx;
 | 
			
		||||
            Lexicographic::IndexFromCoor(coord, local_idx, grid->LocalDimensions());
 | 
			
		||||
            for(int mu = 0; mu < 2 * Nd; ++mu)
 | 
			
		||||
              for(int c1 = 0; c1 < Nc; ++c1) {
 | 
			
		||||
                for(int c2 = 0; c2 < Nc; ++c2) {
 | 
			
		||||
                  u_fb[local_idx](mu)()(c1,c2) = node_buff[mu+buff_idx]()()(c1,c2);
 | 
			
		||||
                }
 | 
			
		||||
              }
 | 
			
		||||
            buff_idx += 2 * Nd;
 | 
			
		||||
          }
 | 
			
		||||
 | 
			
		||||
    assert(node_buff.size() == buff_idx);
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
@@ -44,7 +44,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
 | 
			
		||||
#include <sys/syscall.h>
 | 
			
		||||
#endif
 | 
			
		||||
#ifdef __x86_64__
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
accelerator_inline uint64_t __rdtsc(void) {  return 0; }
 | 
			
		||||
accelerator_inline uint64_t __rdpmc(int ) {  return 0; }
 | 
			
		||||
#else
 | 
			
		||||
@@ -95,7 +95,8 @@ inline uint64_t cyclecount(void){
 | 
			
		||||
}
 | 
			
		||||
#elif defined __x86_64__
 | 
			
		||||
inline uint64_t cyclecount(void){ 
 | 
			
		||||
  return __rdtsc();
 | 
			
		||||
  uint64_t ret = __rdtsc();
 | 
			
		||||
  return (uint64_t)ret;
 | 
			
		||||
}
 | 
			
		||||
#else
 | 
			
		||||
 | 
			
		||||
@@ -111,7 +112,6 @@ class PerformanceCounter {
 | 
			
		||||
private:
 | 
			
		||||
 | 
			
		||||
  typedef struct { 
 | 
			
		||||
  public:
 | 
			
		||||
    uint32_t type;
 | 
			
		||||
    uint64_t config;
 | 
			
		||||
    const char *name;
 | 
			
		||||
 
 | 
			
		||||
@@ -110,15 +110,15 @@ public:
 | 
			
		||||
#endif
 | 
			
		||||
    accumulator = std::chrono::duration_cast<GridUsecs>(start-start); 
 | 
			
		||||
  }
 | 
			
		||||
  GridTime Elapsed(void) {
 | 
			
		||||
  GridTime Elapsed(void) const {
 | 
			
		||||
    assert(running == false);
 | 
			
		||||
    return std::chrono::duration_cast<GridTime>( accumulator );
 | 
			
		||||
  }
 | 
			
		||||
  uint64_t useconds(void){
 | 
			
		||||
  uint64_t useconds(void) const {
 | 
			
		||||
    assert(running == false);
 | 
			
		||||
    return (uint64_t) accumulator.count();
 | 
			
		||||
  }
 | 
			
		||||
  bool isRunning(void){
 | 
			
		||||
  bool isRunning(void) const {
 | 
			
		||||
    return running;
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 
 | 
			
		||||
@@ -12773,7 +12773,7 @@ namespace pugi
 | 
			
		||||
#undef PUGI__THROW_ERROR
 | 
			
		||||
#undef PUGI__CHECK_ERROR
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_NVCC
 | 
			
		||||
#ifdef GRID_CUDA
 | 
			
		||||
#pragma pop
 | 
			
		||||
#endif
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -47,7 +47,7 @@ static constexpr int Ym = 5;
 | 
			
		||||
static constexpr int Zm = 6;
 | 
			
		||||
static constexpr int Tm = 7;
 | 
			
		||||
 | 
			
		||||
static constexpr int Nc=3;
 | 
			
		||||
static constexpr int Nc=Config_Nc;
 | 
			
		||||
static constexpr int Ns=4;
 | 
			
		||||
static constexpr int Nd=4;
 | 
			
		||||
static constexpr int Nhs=2; // half spinor
 | 
			
		||||
@@ -80,6 +80,13 @@ template<typename T> struct isSpinor {
 | 
			
		||||
template <typename T> using IfSpinor    = Invoke<std::enable_if< isSpinor<T>::value,int> > ;
 | 
			
		||||
template <typename T> using IfNotSpinor = Invoke<std::enable_if<!isSpinor<T>::value,int> > ;
 | 
			
		||||
 | 
			
		||||
const int CoarseIndex = 4;
 | 
			
		||||
template<typename T> struct isCoarsened {
 | 
			
		||||
   static constexpr bool value = (CoarseIndex<=T::TensorLevel);
 | 
			
		||||
};
 | 
			
		||||
template <typename T> using IfCoarsened    = Invoke<std::enable_if< isCoarsened<T>::value,int> > ;
 | 
			
		||||
template <typename T> using IfNotCoarsened = Invoke<std::enable_if<!isCoarsened<T>::value,int> > ;
 | 
			
		||||
 | 
			
		||||
// ChrisK very keen to add extra space for Gparity doubling.
 | 
			
		||||
//
 | 
			
		||||
// Also add domain wall index, in a way where Wilson operator 
 | 
			
		||||
@@ -133,23 +140,23 @@ typedef iSpinColourMatrix<vComplex >    vSpinColourMatrix;
 | 
			
		||||
typedef iSpinColourMatrix<vComplexF>    vSpinColourMatrixF;
 | 
			
		||||
typedef iSpinColourMatrix<vComplexD>    vSpinColourMatrixD;
 | 
			
		||||
 | 
			
		||||
    // SpinColourSpinColour matrix
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD;
 | 
			
		||||
// SpinColourSpinColour matrix
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD;
 | 
			
		||||
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD;
 | 
			
		||||
 | 
			
		||||
    // SpinColourSpinColour matrix
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD;
 | 
			
		||||
// SpinColourSpinColour matrix
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD;
 | 
			
		||||
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF;
 | 
			
		||||
    typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF;
 | 
			
		||||
typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD;
 | 
			
		||||
 | 
			
		||||
// LorentzColour
 | 
			
		||||
typedef iLorentzColourMatrix<Complex  > LorentzColourMatrix;
 | 
			
		||||
@@ -443,16 +450,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz
 | 
			
		||||
//////////////////////////////////////////////
 | 
			
		||||
// Fermion <-> propagator assignements
 | 
			
		||||
//////////////////////////////////////////////
 | 
			
		||||
    //template <class Prop, class Ferm>
 | 
			
		||||
    template <class Fimpl>
 | 
			
		||||
      void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c)
 | 
			
		||||
//template <class Prop, class Ferm>
 | 
			
		||||
template <class Fimpl>
 | 
			
		||||
void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c)
 | 
			
		||||
{
 | 
			
		||||
  for(int j = 0; j < Ns; ++j)
 | 
			
		||||
    {
 | 
			
		||||
      auto pjs = peekSpin(p, j, s);
 | 
			
		||||
      auto fj  = peekSpin(f, j);
 | 
			
		||||
            
 | 
			
		||||
            for(int i = 0; i < Fimpl::Dimension; ++i)
 | 
			
		||||
      for(int i = 0; i < Fimpl::Dimension; ++i)
 | 
			
		||||
	{
 | 
			
		||||
	  pokeColour(pjs, peekColour(fj, i), i, c);
 | 
			
		||||
	}
 | 
			
		||||
@@ -460,16 +467,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz
 | 
			
		||||
    }
 | 
			
		||||
}
 | 
			
		||||
    
 | 
			
		||||
    //template <class Prop, class Ferm>
 | 
			
		||||
    template <class Fimpl>
 | 
			
		||||
      void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c)
 | 
			
		||||
//template <class Prop, class Ferm>
 | 
			
		||||
template <class Fimpl>
 | 
			
		||||
void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c)
 | 
			
		||||
{
 | 
			
		||||
  for(int j = 0; j < Ns; ++j)
 | 
			
		||||
    {
 | 
			
		||||
      auto pjs = peekSpin(p, j, s);
 | 
			
		||||
      auto fj  = peekSpin(f, j);
 | 
			
		||||
            
 | 
			
		||||
            for(int i = 0; i < Fimpl::Dimension; ++i)
 | 
			
		||||
      for(int i = 0; i < Fimpl::Dimension; ++i)
 | 
			
		||||
	{
 | 
			
		||||
	  pokeColour(fj, peekColour(pjs, i, c), i);
 | 
			
		||||
	}
 | 
			
		||||
 
 | 
			
		||||
@@ -40,8 +40,8 @@ public:
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD  M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual RealD  Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
  virtual void   Meooe       (const FermionField &in, FermionField &out);
 | 
			
		||||
@@ -141,7 +141,33 @@ public:
 | 
			
		||||
  Vector<iSinglet<Simd> >  MatpInvDag;
 | 
			
		||||
  Vector<iSinglet<Simd> >  MatmInvDag;
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Conserved current utilities
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
  // Virtual can't template
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
				PropagatorField &q_in_2,
 | 
			
		||||
				PropagatorField &q_out,
 | 
			
		||||
				PropagatorField &phys_src,
 | 
			
		||||
				Current curr_type, 
 | 
			
		||||
				unsigned int mu);
 | 
			
		||||
 | 
			
		||||
   void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
			   PropagatorField &q_out,
 | 
			
		||||
			   PropagatorField &phys_src,
 | 
			
		||||
			   Current curr_type,
 | 
			
		||||
			   unsigned int mu,
 | 
			
		||||
			   unsigned int tmin,
 | 
			
		||||
			   unsigned int tmax,
 | 
			
		||||
			   ComplexField &lattice_cmplx);
 | 
			
		||||
 | 
			
		||||
  void ContractJ5q(PropagatorField &q_in,ComplexField &J5q);
 | 
			
		||||
  void ContractJ5q(FermionField &q_in,ComplexField &J5q);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Constructors
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  CayleyFermion5D(GaugeField &_Umu,
 | 
			
		||||
		  GridCartesian         &FiveDimGrid,
 | 
			
		||||
		  GridRedBlackCartesian &FiveDimRedBlackGrid,
 | 
			
		||||
 
 | 
			
		||||
@@ -41,8 +41,8 @@ public:
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD  M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual RealD  Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operaions
 | 
			
		||||
  virtual void   Meooe       (const FermionField &in, FermionField &out);
 | 
			
		||||
 
 | 
			
		||||
@@ -53,8 +53,8 @@ public:
 | 
			
		||||
  virtual void  DtildeInv  (const FermionField& in, FermionField& out);
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD M          (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual RealD Mdag       (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual void  M          (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual void  Mdag       (const FermionField& in, FermionField& out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
  virtual void  Mooee      (const FermionField& in, FermionField& out);
 | 
			
		||||
 
 | 
			
		||||
@@ -114,19 +114,22 @@ public:
 | 
			
		||||
      U = adj(Cshift(U, mu, -1));
 | 
			
		||||
      PokeIndex<LorentzIndex>(Uadj, U, mu);
 | 
			
		||||
    }
 | 
			
		||||
    
 | 
			
		||||
    for (int lidx = 0; lidx < GaugeGrid->lSites(); lidx++) {
 | 
			
		||||
 | 
			
		||||
    autoView(Umu_v,Umu,CpuRead);
 | 
			
		||||
    autoView(Uadj_v,Uadj,CpuRead);
 | 
			
		||||
    autoView(Uds_v,Uds,CpuWrite);
 | 
			
		||||
    thread_for( lidx, GaugeGrid->lSites(), {
 | 
			
		||||
      Coordinate lcoor;
 | 
			
		||||
      GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor);
 | 
			
		||||
      
 | 
			
		||||
      peekLocalSite(ScalarUmu, Umu, lcoor);
 | 
			
		||||
      peekLocalSite(ScalarUmu, Umu_v, lcoor);
 | 
			
		||||
      for (int mu = 0; mu < 4; mu++) ScalarUds(mu) = ScalarUmu(mu);
 | 
			
		||||
      
 | 
			
		||||
      peekLocalSite(ScalarUmu, Uadj, lcoor);
 | 
			
		||||
      peekLocalSite(ScalarUmu, Uadj_v, lcoor);
 | 
			
		||||
      for (int mu = 0; mu < 4; mu++) ScalarUds(mu + 4) = ScalarUmu(mu);
 | 
			
		||||
      
 | 
			
		||||
      pokeLocalSite(ScalarUds, Uds, lcoor);
 | 
			
		||||
    }
 | 
			
		||||
      pokeLocalSite(ScalarUds, Uds_v, lcoor);
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
      
 | 
			
		||||
  inline void InsertForce4D(GaugeField &mat, FermionField &Btilde,FermionField &A, int mu) 
 | 
			
		||||
 
 | 
			
		||||
@@ -57,6 +57,7 @@ NAMESPACE_CHECK(WilsonClover);
 | 
			
		||||
#include <Grid/qcd/action/fermion/WilsonFermion5D.h>     // 5d base used by all 5d overlap types
 | 
			
		||||
NAMESPACE_CHECK(Wilson5D);
 | 
			
		||||
 | 
			
		||||
#include <Grid/qcd/action/fermion/NaiveStaggeredFermion.h>
 | 
			
		||||
#include <Grid/qcd/action/fermion/ImprovedStaggeredFermion.h>
 | 
			
		||||
#include <Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h>
 | 
			
		||||
NAMESPACE_CHECK(Staggered);
 | 
			
		||||
@@ -282,11 +283,15 @@ typedef ImprovedStaggeredFermion<StaggeredImplR> ImprovedStaggeredFermionR;
 | 
			
		||||
typedef ImprovedStaggeredFermion<StaggeredImplF> ImprovedStaggeredFermionF;
 | 
			
		||||
typedef ImprovedStaggeredFermion<StaggeredImplD> ImprovedStaggeredFermionD;
 | 
			
		||||
 | 
			
		||||
typedef NaiveStaggeredFermion<StaggeredImplR> NaiveStaggeredFermionR;
 | 
			
		||||
typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF;
 | 
			
		||||
typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD;
 | 
			
		||||
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredImplR> ImprovedStaggeredFermion5DR;
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredImplF> ImprovedStaggeredFermion5DF;
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredImplD> ImprovedStaggeredFermion5DD;
 | 
			
		||||
 | 
			
		||||
#ifndef GRID_NVCC
 | 
			
		||||
#ifndef GRID_CUDA
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplR> ImprovedStaggeredFermionVec5dR;
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplF> ImprovedStaggeredFermionVec5dF;
 | 
			
		||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplD> ImprovedStaggeredFermionVec5dD;
 | 
			
		||||
 
 | 
			
		||||
@@ -58,8 +58,8 @@ public:
 | 
			
		||||
  virtual GridBase *GaugeRedBlackGrid(void)   =0;
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD  M    (const FermionField &in, FermionField &out)=0;
 | 
			
		||||
  virtual RealD  Mdag (const FermionField &in, FermionField &out)=0;
 | 
			
		||||
  virtual void  M    (const FermionField &in, FermionField &out)=0;
 | 
			
		||||
  virtual void  Mdag (const FermionField &in, FermionField &out)=0;
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operaions
 | 
			
		||||
  virtual void   Meooe       (const FermionField &in, FermionField &out)=0;
 | 
			
		||||
@@ -86,15 +86,14 @@ public:
 | 
			
		||||
  virtual void DhopDerivEO(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0;
 | 
			
		||||
  virtual void DhopDerivOE(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0;
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
  virtual void  Mdiag  (const FermionField &in, FermionField &out) { Mooee(in,out);};   // Same as Mooee applied to both CB's
 | 
			
		||||
  virtual void  Mdir   (const FermionField &in, FermionField &out,int dir,int disp)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
 | 
			
		||||
  virtual void  MdirAll(const FermionField &in, std::vector<FermionField> &out)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
      virtual void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);};
 | 
			
		||||
  virtual void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);};
 | 
			
		||||
 | 
			
		||||
      virtual void  FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist) 
 | 
			
		||||
  virtual void  FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist) 
 | 
			
		||||
      {
 | 
			
		||||
	FFT theFFT((GridCartesian *) in.Grid());
 | 
			
		||||
 | 
			
		||||
@@ -148,15 +147,19 @@ public:
 | 
			
		||||
  virtual void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
					PropagatorField &q_in_2,
 | 
			
		||||
					PropagatorField &q_out,
 | 
			
		||||
					PropagatorField &phys_src,
 | 
			
		||||
					Current curr_type,
 | 
			
		||||
					unsigned int mu)=0;
 | 
			
		||||
					unsigned int mu)
 | 
			
		||||
  {assert(0);};
 | 
			
		||||
  virtual void SeqConservedCurrent(PropagatorField &q_in, 
 | 
			
		||||
				   PropagatorField &q_out,
 | 
			
		||||
				   PropagatorField &phys_src,
 | 
			
		||||
				   Current curr_type,
 | 
			
		||||
				   unsigned int mu,
 | 
			
		||||
				   unsigned int tmin, 
 | 
			
		||||
				   unsigned int tmax,
 | 
			
		||||
				   ComplexField &lattice_cmplx)=0;
 | 
			
		||||
				   ComplexField &lattice_cmplx)
 | 
			
		||||
  {assert(0);};
 | 
			
		||||
 | 
			
		||||
      // Only reimplemented in Wilson5D 
 | 
			
		||||
      // Default to just a zero correlation function
 | 
			
		||||
 
 | 
			
		||||
@@ -38,6 +38,7 @@ public:
 | 
			
		||||
 static const bool isFundamental = Representation::isFundamental;
 | 
			
		||||
 static const int Nhcs = Options::Nhcs;
 | 
			
		||||
 static const bool LsVectorised=false;
 | 
			
		||||
 static const bool isGparity=true;
 | 
			
		||||
 | 
			
		||||
 typedef ConjugateGaugeImpl< GaugeImplTypes<S,Dimension> > Gimpl;
 | 
			
		||||
 INHERIT_GIMPL_TYPES(Gimpl);
 | 
			
		||||
@@ -46,7 +47,7 @@ public:
 | 
			
		||||
 typedef typename Options::template PrecisionMapper<Simd>::LowerPrecVector SimdL;
 | 
			
		||||
      
 | 
			
		||||
 template <typename vtype> using iImplSpinor            = iVector<iVector<iVector<vtype, Dimension>, Ns>,   Ngp>;
 | 
			
		||||
 template <typename vtype> using iImplPropagator        = iVector<iMatrix<iMatrix<vtype, Dimension>, Ns>,   Ngp>;
 | 
			
		||||
 template <typename vtype> using iImplPropagator        = iMatrix<iMatrix<iMatrix<vtype, Dimension>, Ns>,   Ngp>;
 | 
			
		||||
 template <typename vtype> using iImplHalfSpinor        = iVector<iVector<iVector<vtype, Dimension>, Nhs>,  Ngp>;
 | 
			
		||||
 template <typename vtype> using iImplHalfCommSpinor    = iVector<iVector<iVector<vtype, Dimension>, Nhcs>, Ngp>;
 | 
			
		||||
 template <typename vtype> using iImplDoubledGaugeField = iVector<iVector<iScalar<iMatrix<vtype, Dimension> >, Nds>, Ngp>;
 | 
			
		||||
@@ -80,6 +81,7 @@ public:
 | 
			
		||||
  {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  } 
 | 
			
		||||
 | 
			
		||||
  template<class _Spinor>
 | 
			
		||||
  static accelerator_inline void multLink(_Spinor &phi, 
 | 
			
		||||
					  const SiteDoubledGaugeField &U,
 | 
			
		||||
@@ -94,43 +96,31 @@ public:
 | 
			
		||||
    int sl        = St._simd_layout[direction];
 | 
			
		||||
    Coordinate icoor;
 | 
			
		||||
 | 
			
		||||
#ifdef __CUDA_ARCH__
 | 
			
		||||
    _Spinor tmp;
 | 
			
		||||
 | 
			
		||||
#ifdef GRID_SIMT
 | 
			
		||||
    const int Nsimd =SiteDoubledGaugeField::Nsimd();
 | 
			
		||||
    int s = SIMTlane(Nsimd);
 | 
			
		||||
    int s = acceleratorSIMTlane(Nsimd);
 | 
			
		||||
    St.iCoorFromIindex(icoor,s);
 | 
			
		||||
 | 
			
		||||
    int mmu = mu % Nd;
 | 
			
		||||
    if ( SE->_around_the_world && St.parameters.twists[mmu] ) {
 | 
			
		||||
      
 | 
			
		||||
      int permute_lane = (sl==1) 
 | 
			
		||||
    	|| ((distance== 1)&&(icoor[direction]==1))
 | 
			
		||||
	|| ((distance==-1)&&(icoor[direction]==0));
 | 
			
		||||
 | 
			
		||||
      if ( permute_lane ) { 
 | 
			
		||||
	tmp(0) = chi(1);
 | 
			
		||||
	tmp(1) = chi(0);
 | 
			
		||||
      } else {
 | 
			
		||||
	tmp(0) = chi(0);
 | 
			
		||||
	tmp(1) = chi(1);
 | 
			
		||||
      }
 | 
			
		||||
    auto UU0=coalescedRead(U(0)(mu));
 | 
			
		||||
    auto UU1=coalescedRead(U(1)(mu));
 | 
			
		||||
    
 | 
			
		||||
    //Decide whether we do a G-parity flavor twist
 | 
			
		||||
    //Note: this assumes (but does not check) that sl==1 || sl==2 i.e. max 2 SIMD lanes in G-parity dir
 | 
			
		||||
    //It also assumes (but does not check) that abs(distance) == 1
 | 
			
		||||
    int permute_lane = (sl==1) 
 | 
			
		||||
    || ((distance== 1)&&(icoor[direction]==1))
 | 
			
		||||
    || ((distance==-1)&&(icoor[direction]==0));
 | 
			
		||||
 | 
			
		||||
      auto UU0=coalescedRead(U(0)(mu));
 | 
			
		||||
      auto UU1=coalescedRead(U(1)(mu));
 | 
			
		||||
    permute_lane = permute_lane && SE->_around_the_world && St.parameters.twists[mmu]; //only if we are going around the world
 | 
			
		||||
 | 
			
		||||
      mult(&phi(0),&UU0,&tmp(0));
 | 
			
		||||
      mult(&phi(1),&UU1,&tmp(1));
 | 
			
		||||
    //Apply the links
 | 
			
		||||
    int f_upper = permute_lane ? 1 : 0;
 | 
			
		||||
    int f_lower = !f_upper;
 | 
			
		||||
 | 
			
		||||
    } else {
 | 
			
		||||
 | 
			
		||||
      auto UU0=coalescedRead(U(0)(mu));
 | 
			
		||||
      auto UU1=coalescedRead(U(1)(mu));
 | 
			
		||||
 | 
			
		||||
      mult(&phi(0),&UU0,&chi(0));
 | 
			
		||||
      mult(&phi(1),&UU1,&chi(1));
 | 
			
		||||
 | 
			
		||||
    }
 | 
			
		||||
    mult(&phi(0),&UU0,&chi(f_upper));
 | 
			
		||||
    mult(&phi(1),&UU1,&chi(f_lower));
 | 
			
		||||
 | 
			
		||||
#else
 | 
			
		||||
    typedef _Spinor vobj;
 | 
			
		||||
@@ -191,6 +181,16 @@ public:
 | 
			
		||||
#endif   
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
  template<class _SpinorField>
 | 
			
		||||
  inline void multLinkField(_SpinorField & out,
 | 
			
		||||
			    const DoubledGaugeField &Umu,
 | 
			
		||||
			    const _SpinorField & phi,
 | 
			
		||||
			    int mu)
 | 
			
		||||
  {
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  template <class ref>
 | 
			
		||||
  static accelerator_inline void loadLinkElement(Simd ®, ref &memory) 
 | 
			
		||||
  {
 | 
			
		||||
@@ -220,15 +220,17 @@ public:
 | 
			
		||||
      if ( Params.twists[mu] ) { 
 | 
			
		||||
	Uconj = where(coor==neglink,-Uconj,Uconj);
 | 
			
		||||
      }
 | 
			
		||||
	  
 | 
			
		||||
      auto U_v = U.View();
 | 
			
		||||
      auto Uds_v = Uds.View();
 | 
			
		||||
      auto Uconj_v = Uconj.View();
 | 
			
		||||
      auto Utmp_v= Utmp.View();
 | 
			
		||||
      thread_foreach(ss,U_v,{
 | 
			
		||||
	Uds_v[ss](0)(mu) = U_v[ss]();
 | 
			
		||||
	Uds_v[ss](1)(mu) = Uconj_v[ss]();
 | 
			
		||||
      });
 | 
			
		||||
 | 
			
		||||
      {
 | 
			
		||||
	autoView( U_v , U, CpuRead);
 | 
			
		||||
	autoView( Uconj_v , Uconj, CpuRead);
 | 
			
		||||
	autoView( Uds_v , Uds, CpuWrite);
 | 
			
		||||
	autoView( Utmp_v, Utmp, CpuWrite);
 | 
			
		||||
	thread_foreach(ss,U_v,{
 | 
			
		||||
	    Uds_v[ss](0)(mu) = U_v[ss]();
 | 
			
		||||
	    Uds_v[ss](1)(mu) = Uconj_v[ss]();
 | 
			
		||||
	  });
 | 
			
		||||
      }
 | 
			
		||||
          
 | 
			
		||||
      U     = adj(Cshift(U    ,mu,-1));      // correct except for spanning the boundary
 | 
			
		||||
      Uconj = adj(Cshift(Uconj,mu,-1));
 | 
			
		||||
@@ -238,19 +240,25 @@ public:
 | 
			
		||||
	Utmp = where(coor==0,Uconj,Utmp);
 | 
			
		||||
      }
 | 
			
		||||
 | 
			
		||||
      thread_foreach(ss,Utmp_v,{
 | 
			
		||||
	Uds_v[ss](0)(mu+4) = Utmp_v[ss]();
 | 
			
		||||
      });
 | 
			
		||||
          
 | 
			
		||||
      {
 | 
			
		||||
	autoView( Uds_v , Uds, CpuWrite);
 | 
			
		||||
	autoView( Utmp_v, Utmp, CpuWrite);
 | 
			
		||||
	thread_foreach(ss,Utmp_v,{
 | 
			
		||||
	    Uds_v[ss](0)(mu+4) = Utmp_v[ss]();
 | 
			
		||||
	  });
 | 
			
		||||
      }
 | 
			
		||||
      Utmp = Uconj;
 | 
			
		||||
      if ( Params.twists[mu] ) { 
 | 
			
		||||
	Utmp = where(coor==0,U,Utmp);
 | 
			
		||||
      }
 | 
			
		||||
	  
 | 
			
		||||
      thread_foreach(ss,Utmp_v,{
 | 
			
		||||
        Uds_v[ss](1)(mu+4) = Utmp_v[ss]();
 | 
			
		||||
      });
 | 
			
		||||
          
 | 
			
		||||
 | 
			
		||||
      {	  
 | 
			
		||||
	autoView( Uds_v , Uds, CpuWrite);
 | 
			
		||||
	autoView( Utmp_v, Utmp, CpuWrite);
 | 
			
		||||
	thread_foreach(ss,Utmp_v,{
 | 
			
		||||
	    Uds_v[ss](1)(mu+4) = Utmp_v[ss]();
 | 
			
		||||
        });
 | 
			
		||||
      }
 | 
			
		||||
    }
 | 
			
		||||
  }
 | 
			
		||||
      
 | 
			
		||||
@@ -260,11 +268,14 @@ public:
 | 
			
		||||
    GaugeLinkField link(mat.Grid());
 | 
			
		||||
    // use lorentz for flavour as hack.
 | 
			
		||||
    auto tmp = TraceIndex<SpinIndex>(outerProduct(Btilde, A));
 | 
			
		||||
    auto link_v = link.View();
 | 
			
		||||
    auto tmp_v = tmp.View();
 | 
			
		||||
    thread_foreach(ss,tmp_v,{
 | 
			
		||||
      link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1));
 | 
			
		||||
    });
 | 
			
		||||
 | 
			
		||||
    {
 | 
			
		||||
      autoView( link_v , link, CpuWrite);
 | 
			
		||||
      autoView( tmp_v , tmp, CpuRead);
 | 
			
		||||
      thread_foreach(ss,tmp_v,{
 | 
			
		||||
	  link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1));
 | 
			
		||||
	});
 | 
			
		||||
    }
 | 
			
		||||
    PokeIndex<LorentzIndex>(mat, link, mu);
 | 
			
		||||
    return;
 | 
			
		||||
  }
 | 
			
		||||
@@ -294,16 +305,18 @@ public:
 | 
			
		||||
        
 | 
			
		||||
    GaugeLinkField tmp(mat.Grid());
 | 
			
		||||
    tmp = Zero();
 | 
			
		||||
    auto tmp_v = tmp.View();
 | 
			
		||||
    auto Atilde_v = Atilde.View();
 | 
			
		||||
    auto Btilde_v = Btilde.View();
 | 
			
		||||
    thread_for(ss,tmp.Grid()->oSites(),{
 | 
			
		||||
      for (int s = 0; s < Ls; s++) {
 | 
			
		||||
	int sF = s + Ls * ss;
 | 
			
		||||
	auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF]));
 | 
			
		||||
	tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1));
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
    {
 | 
			
		||||
      autoView( tmp_v , tmp, CpuWrite);
 | 
			
		||||
      autoView( Atilde_v , Atilde, CpuRead);
 | 
			
		||||
      autoView( Btilde_v , Btilde, CpuRead);
 | 
			
		||||
      thread_for(ss,tmp.Grid()->oSites(),{
 | 
			
		||||
	  for (int s = 0; s < Ls; s++) {
 | 
			
		||||
	    int sF = s + Ls * ss;
 | 
			
		||||
	    auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF]));
 | 
			
		||||
	    tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1));
 | 
			
		||||
	  }
 | 
			
		||||
	});
 | 
			
		||||
    }
 | 
			
		||||
    PokeIndex<LorentzIndex>(mat, tmp, mu);
 | 
			
		||||
    return;
 | 
			
		||||
  }
 | 
			
		||||
 
 | 
			
		||||
@@ -71,8 +71,8 @@ public:
 | 
			
		||||
  // override multiply; cut number routines if pass dagger argument
 | 
			
		||||
  // and also make interface more uniformly consistent
 | 
			
		||||
  //////////////////////////////////////////////////////////////////
 | 
			
		||||
  RealD M(const FermionField &in, FermionField &out);
 | 
			
		||||
  RealD Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
  void M(const FermionField &in, FermionField &out);
 | 
			
		||||
  void Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////////////
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
@@ -185,10 +185,12 @@ public:
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
                                PropagatorField &q_in_2,
 | 
			
		||||
                                PropagatorField &q_out,
 | 
			
		||||
                                PropagatorField &src,
 | 
			
		||||
                                Current curr_type,
 | 
			
		||||
                                unsigned int mu);
 | 
			
		||||
  void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
                           PropagatorField &q_out,
 | 
			
		||||
                           PropagatorField &srct,
 | 
			
		||||
                           Current curr_type,
 | 
			
		||||
                           unsigned int mu, 
 | 
			
		||||
                           unsigned int tmin,
 | 
			
		||||
 
 | 
			
		||||
@@ -1,4 +1,3 @@
 | 
			
		||||
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
@@ -62,8 +61,8 @@ public:
 | 
			
		||||
  double DhopCalls;
 | 
			
		||||
  double DhopCommTime;
 | 
			
		||||
  double DhopComputeTime;
 | 
			
		||||
      double DhopComputeTime2;
 | 
			
		||||
      double DhopFaceTime;
 | 
			
		||||
  double DhopComputeTime2;
 | 
			
		||||
  double DhopFaceTime;
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Implement the abstract base
 | 
			
		||||
@@ -74,8 +73,8 @@ public:
 | 
			
		||||
  GridBase *FermionRedBlackGrid(void)    { return _FiveDimRedBlackGrid;}
 | 
			
		||||
 | 
			
		||||
  // full checkerboard operations; leave unimplemented as abstract for now
 | 
			
		||||
  RealD  M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  RealD  Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
  void  M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  void  Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
  void   Meooe       (const FermionField &in, FermionField &out);
 | 
			
		||||
@@ -209,7 +208,7 @@ public:
 | 
			
		||||
  LebesgueOrder LebesgueEvenOdd;
 | 
			
		||||
    
 | 
			
		||||
  // Comms buffer
 | 
			
		||||
  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;
 | 
			
		||||
  //  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;
 | 
			
		||||
    
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Conserved current utilities
 | 
			
		||||
@@ -217,15 +216,17 @@ public:
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
				PropagatorField &q_in_2,
 | 
			
		||||
				PropagatorField &q_out,
 | 
			
		||||
				PropagatorField &src,
 | 
			
		||||
				Current curr_type,
 | 
			
		||||
				unsigned int mu);
 | 
			
		||||
  void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
			   PropagatorField &q_out,
 | 
			
		||||
			   PropagatorField &src,
 | 
			
		||||
			   Current curr_type,
 | 
			
		||||
			   unsigned int mu, 
 | 
			
		||||
			   unsigned int tmin,
 | 
			
		||||
                             unsigned int tmax,
 | 
			
		||||
                 	     ComplexField &lattice_cmplx);
 | 
			
		||||
			   unsigned int tmax,
 | 
			
		||||
			   ComplexField &lattice_cmplx);
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 
 | 
			
		||||
@@ -40,6 +40,11 @@ inline void convert(const Fieldi &from,Fieldo &to)
 | 
			
		||||
  to=from;
 | 
			
		||||
}
 | 
			
		||||
 | 
			
		||||
struct MADWFinnerIterCallbackBase{
 | 
			
		||||
  virtual void operator()(const RealD current_resid){}
 | 
			
		||||
  virtual ~MADWFinnerIterCallbackBase(){}
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template<class Matrixo,class Matrixi,class PVinverter,class SchurSolver, class Guesser> 
 | 
			
		||||
class MADWF 
 | 
			
		||||
{
 | 
			
		||||
@@ -56,24 +61,30 @@ class MADWF
 | 
			
		||||
 | 
			
		||||
  RealD target_resid;
 | 
			
		||||
  int   maxiter;
 | 
			
		||||
 public:
 | 
			
		||||
 | 
			
		||||
  //operator() is called on "callback" at the end of every inner iteration. This allows for example the adjustment of the inner
 | 
			
		||||
  //tolerance to speed up subsequent iteration
 | 
			
		||||
  MADWFinnerIterCallbackBase* callback;
 | 
			
		||||
  
 | 
			
		||||
 public:
 | 
			
		||||
  MADWF(Matrixo &_Mato,
 | 
			
		||||
	Matrixi &_Mati, 
 | 
			
		||||
	PVinverter &_PauliVillarsSolvero, 
 | 
			
		||||
	Matrixi &_Mati,
 | 
			
		||||
	PVinverter &_PauliVillarsSolvero,
 | 
			
		||||
	SchurSolver &_SchurSolveri,
 | 
			
		||||
	Guesser & _Guesseri,
 | 
			
		||||
	RealD resid,
 | 
			
		||||
	int _maxiter) :
 | 
			
		||||
	int _maxiter,
 | 
			
		||||
	MADWFinnerIterCallbackBase* _callback = NULL) :
 | 
			
		||||
 | 
			
		||||
  Mato(_Mato),Mati(_Mati),
 | 
			
		||||
    SchurSolveri(_SchurSolveri),
 | 
			
		||||
    PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri)
 | 
			
		||||
  {   
 | 
			
		||||
    target_resid=resid;
 | 
			
		||||
    maxiter     =_maxiter; 
 | 
			
		||||
  };
 | 
			
		||||
 | 
			
		||||
    PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri),
 | 
			
		||||
    callback(_callback)
 | 
			
		||||
    {
 | 
			
		||||
      target_resid=resid;
 | 
			
		||||
      maxiter     =_maxiter;
 | 
			
		||||
    };
 | 
			
		||||
   
 | 
			
		||||
  void operator() (const FermionFieldo &src4,FermionFieldo &sol5)
 | 
			
		||||
  {
 | 
			
		||||
    std::cout << GridLogMessage<< " ************************************************" << std::endl;
 | 
			
		||||
@@ -177,6 +188,8 @@ class MADWF
 | 
			
		||||
       std::cout << GridLogMessage << "Residual " << i << ": " << resid  << std::endl;
 | 
			
		||||
       std::cout << GridLogMessage << "***************************************" <<std::endl;
 | 
			
		||||
 | 
			
		||||
       if(callback != NULL) (*callback)(resid);       
 | 
			
		||||
       
 | 
			
		||||
       if (resid < target_resid) {
 | 
			
		||||
	 return;
 | 
			
		||||
       }
 | 
			
		||||
 
 | 
			
		||||
@@ -56,8 +56,8 @@ public:
 | 
			
		||||
  virtual void  DtildeInv        (const FermionField& in, FermionField& out);
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD M                (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual RealD Mdag             (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual void  M                (const FermionField& in, FermionField& out);
 | 
			
		||||
  virtual void  Mdag             (const FermionField& in, FermionField& out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
  virtual void  Mooee            (const FermionField& in, FermionField& out);
 | 
			
		||||
 
 | 
			
		||||
@@ -59,7 +59,7 @@ public:
 | 
			
		||||
  {
 | 
			
		||||
    RealD eps = 1.0;
 | 
			
		||||
 | 
			
		||||
    std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl;
 | 
			
		||||
    //    std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl;
 | 
			
		||||
    Approx::zolotarev_data *zdata = Approx::higham(eps,this->Ls);// eps is ignored for higham
 | 
			
		||||
    assert(zdata->n==this->Ls);
 | 
			
		||||
	
 | 
			
		||||
 
 | 
			
		||||
							
								
								
									
										194
									
								
								Grid/qcd/action/fermion/NaiveStaggeredFermion.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										194
									
								
								Grid/qcd/action/fermion/NaiveStaggeredFermion.h
									
									
									
									
									
										Normal file
									
								
							@@ -0,0 +1,194 @@
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
Grid physics library, www.github.com/paboyle/Grid
 | 
			
		||||
 | 
			
		||||
Source file: ./lib/qcd/action/fermion/ImprovedStaggered.h
 | 
			
		||||
 | 
			
		||||
Copyright (C) 2015
 | 
			
		||||
 | 
			
		||||
Author: Azusa Yamaguchi, Peter Boyle
 | 
			
		||||
 | 
			
		||||
This program is free software; you can redistribute it and/or modify
 | 
			
		||||
it under the terms of the GNU General Public License as published by
 | 
			
		||||
the Free Software Foundation; either version 2 of the License, or
 | 
			
		||||
(at your option) any later version.
 | 
			
		||||
 | 
			
		||||
This program is distributed in the hope that it will be useful,
 | 
			
		||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
 | 
			
		||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 | 
			
		||||
GNU General Public License for more details.
 | 
			
		||||
 | 
			
		||||
You should have received a copy of the GNU General Public License along
 | 
			
		||||
with this program; if not, write to the Free Software Foundation, Inc.,
 | 
			
		||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 | 
			
		||||
 | 
			
		||||
See the full license in the file "LICENSE" in the top level distribution
 | 
			
		||||
directory
 | 
			
		||||
*************************************************************************************/
 | 
			
		||||
			   /*  END LEGAL */
 | 
			
		||||
#ifndef GRID_QCD_NAIVE_STAG_FERMION_H
 | 
			
		||||
#define GRID_QCD_NAIVE_STAG_FERMION_H
 | 
			
		||||
 | 
			
		||||
NAMESPACE_BEGIN(Grid);
 | 
			
		||||
 | 
			
		||||
class NaiveStaggeredFermionStatic {
 | 
			
		||||
public:
 | 
			
		||||
  static const std::vector<int> directions;
 | 
			
		||||
  static const std::vector<int> displacements;
 | 
			
		||||
  static const int npoint = 8;
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <class Impl>
 | 
			
		||||
class NaiveStaggeredFermion : public StaggeredKernels<Impl>, public NaiveStaggeredFermionStatic {
 | 
			
		||||
public:
 | 
			
		||||
  INHERIT_IMPL_TYPES(Impl);
 | 
			
		||||
  typedef StaggeredKernels<Impl> Kernels;
 | 
			
		||||
 | 
			
		||||
  FermionField _tmp;
 | 
			
		||||
  FermionField &tmp(void) { return _tmp; }
 | 
			
		||||
 | 
			
		||||
  ////////////////////////////////////////
 | 
			
		||||
  // Performance monitoring
 | 
			
		||||
  ////////////////////////////////////////
 | 
			
		||||
  void Report(void);
 | 
			
		||||
  void ZeroCounters(void);
 | 
			
		||||
  double DhopTotalTime;
 | 
			
		||||
  double DhopCalls;
 | 
			
		||||
  double DhopCommTime;
 | 
			
		||||
  double DhopComputeTime;
 | 
			
		||||
  double DhopComputeTime2;
 | 
			
		||||
  double DhopFaceTime;
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Implement the abstract base
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  GridBase *GaugeGrid(void) { return _grid; }
 | 
			
		||||
  GridBase *GaugeRedBlackGrid(void) { return _cbgrid; }
 | 
			
		||||
  GridBase *FermionGrid(void) { return _grid; }
 | 
			
		||||
  GridBase *FermionRedBlackGrid(void) { return _cbgrid; }
 | 
			
		||||
 | 
			
		||||
  //////////////////////////////////////////////////////////////////
 | 
			
		||||
  // override multiply; cut number routines if pass dagger argument
 | 
			
		||||
  // and also make interface more uniformly consistent
 | 
			
		||||
  //////////////////////////////////////////////////////////////////
 | 
			
		||||
  void M(const FermionField &in, FermionField &out);
 | 
			
		||||
  void Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////////////
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
  /////////////////////////////////////////////////////////
 | 
			
		||||
  void Meooe(const FermionField &in, FermionField &out);
 | 
			
		||||
  void MeooeDag(const FermionField &in, FermionField &out);
 | 
			
		||||
  void Mooee(const FermionField &in, FermionField &out);
 | 
			
		||||
  void MooeeDag(const FermionField &in, FermionField &out);
 | 
			
		||||
  void MooeeInv(const FermionField &in, FermionField &out);
 | 
			
		||||
  void MooeeInvDag(const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  ////////////////////////
 | 
			
		||||
  // Derivative interface
 | 
			
		||||
  ////////////////////////
 | 
			
		||||
  // Interface calls an internal routine
 | 
			
		||||
  void DhopDeriv  (GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
 | 
			
		||||
  void DhopDerivOE(GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
 | 
			
		||||
  void DhopDerivEO(GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // non-hermitian hopping term; half cb or both
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void Dhop  (const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
  void DhopOE(const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
  void DhopEO(const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Multigrid assistance; force term uses too
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void Mdir(const FermionField &in, FermionField &out, int dir, int disp);
 | 
			
		||||
  void MdirAll(const FermionField &in, std::vector<FermionField> &out);
 | 
			
		||||
  void DhopDir(const FermionField &in, FermionField &out, int dir, int disp);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Extra methods added by derived
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void DerivInternal(StencilImpl &st, 
 | 
			
		||||
		     DoubledGaugeField &U,
 | 
			
		||||
		     GaugeField &mat, 
 | 
			
		||||
		     const FermionField &A, const FermionField &B, int dag);
 | 
			
		||||
 | 
			
		||||
  void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
 | 
			
		||||
                    const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
  void DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
 | 
			
		||||
			       const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
  void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
 | 
			
		||||
				   const FermionField &in, FermionField &out, int dag);
 | 
			
		||||
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Grid own interface Constructor
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  NaiveStaggeredFermion(GaugeField &_U, GridCartesian &Fgrid,
 | 
			
		||||
			GridRedBlackCartesian &Hgrid, RealD _mass,
 | 
			
		||||
			RealD _c1, RealD _u0,
 | 
			
		||||
			const ImplParams &p = ImplParams());
 | 
			
		||||
  NaiveStaggeredFermion(GridCartesian &Fgrid,
 | 
			
		||||
			GridRedBlackCartesian &Hgrid, RealD _mass,
 | 
			
		||||
			RealD _c1, RealD _u0,
 | 
			
		||||
			const ImplParams &p = ImplParams());
 | 
			
		||||
 | 
			
		||||
  // DoubleStore impl dependent
 | 
			
		||||
  void ImportGauge      (const GaugeField &_U );
 | 
			
		||||
  DoubledGaugeField &GetU(void)   { return Umu ; } ;
 | 
			
		||||
  void CopyGaugeCheckerboards(void);
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Data members require to support the functionality
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
 | 
			
		||||
  //    protected:
 | 
			
		||||
public:
 | 
			
		||||
  // any other parameters of action ???
 | 
			
		||||
  virtual int   isTrivialEE(void) { return 1; };
 | 
			
		||||
  virtual RealD Mass(void) { return mass; }
 | 
			
		||||
  RealD mass;
 | 
			
		||||
  RealD u0;
 | 
			
		||||
  RealD c1;
 | 
			
		||||
 | 
			
		||||
  GridBase *_grid;
 | 
			
		||||
  GridBase *_cbgrid;
 | 
			
		||||
 | 
			
		||||
  // Defines the stencils for even and odd
 | 
			
		||||
  StencilImpl Stencil;
 | 
			
		||||
  StencilImpl StencilEven;
 | 
			
		||||
  StencilImpl StencilOdd;
 | 
			
		||||
 | 
			
		||||
  // Copy of the gauge field , with even and odd subsets
 | 
			
		||||
  DoubledGaugeField Umu;
 | 
			
		||||
  DoubledGaugeField UmuEven;
 | 
			
		||||
  DoubledGaugeField UmuOdd;
 | 
			
		||||
 | 
			
		||||
  LebesgueOrder Lebesgue;
 | 
			
		||||
  LebesgueOrder LebesgueEvenOdd;
 | 
			
		||||
  
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Conserved current utilities
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
                                PropagatorField &q_in_2,
 | 
			
		||||
                                PropagatorField &q_out,
 | 
			
		||||
                                PropagatorField &src,
 | 
			
		||||
                                Current curr_type,
 | 
			
		||||
                                unsigned int mu);
 | 
			
		||||
  void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
                           PropagatorField &q_out,
 | 
			
		||||
                           PropagatorField &srct,
 | 
			
		||||
                           Current curr_type,
 | 
			
		||||
                           unsigned int mu, 
 | 
			
		||||
                           unsigned int tmin,
 | 
			
		||||
                           unsigned int tmax,
 | 
			
		||||
			   ComplexField &lattice_cmplx);
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF;
 | 
			
		||||
typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD;
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
#endif
 | 
			
		||||
@@ -47,8 +47,8 @@ public:
 | 
			
		||||
  void   M_internal(const FermionField &in, FermionField &out,int dag);
 | 
			
		||||
 | 
			
		||||
  // override multiply
 | 
			
		||||
  virtual RealD  M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual RealD  Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   M    (const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void   Mdag (const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operaions
 | 
			
		||||
  virtual void   Meooe       (const FermionField &in, FermionField &out);
 | 
			
		||||
 
 | 
			
		||||
@@ -47,23 +47,37 @@ template<class Impl> class StaggeredKernels : public FermionOperator<Impl> , pub
 | 
			
		||||
  INHERIT_IMPL_TYPES(Impl);
 | 
			
		||||
  typedef FermionOperator<Impl> Base;
 | 
			
		||||
   
 | 
			
		||||
public:
 | 
			
		||||
    
 | 
			
		||||
   void DhopDirKernel(StencilImpl &st, DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, SiteSpinor * buf,
 | 
			
		||||
		      int sF, int sU, const FermionFieldView &in, FermionFieldView &out, int dir,int disp);
 | 
			
		||||
 public:
 | 
			
		||||
 | 
			
		||||
  void DhopImproved(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
		    DoubledGaugeField &U, DoubledGaugeField &UUU, 
 | 
			
		||||
		    const FermionField &in, FermionField &out, int dag, int interior,int exterior);
 | 
			
		||||
  void DhopNaive(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
		 DoubledGaugeField &U,
 | 
			
		||||
		 const FermionField &in, FermionField &out, int dag, int interior,int exterior);
 | 
			
		||||
  
 | 
			
		||||
  void DhopDirKernel(StencilImpl &st, DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, SiteSpinor * buf,
 | 
			
		||||
		     int sF, int sU, const FermionFieldView &in, FermionFieldView &out, int dir,int disp);
 | 
			
		||||
 protected:    
 | 
			
		||||
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   // Generic Nc kernels
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   void DhopSiteGeneric(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   template<int Naik> 
 | 
			
		||||
   static accelerator_inline
 | 
			
		||||
   void DhopSiteGeneric(StencilView &st, 
 | 
			
		||||
			DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, 
 | 
			
		||||
			SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
			const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
   void DhopSiteGenericInt(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   template<int Naik> static accelerator_inline
 | 
			
		||||
   void DhopSiteGenericInt(StencilView &st, 
 | 
			
		||||
			   DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, 
 | 
			
		||||
			   SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
			   const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
   void DhopSiteGenericExt(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   template<int Naik> static accelerator_inline
 | 
			
		||||
   void DhopSiteGenericExt(StencilView &st, 
 | 
			
		||||
			   DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
 | 
			
		||||
			   SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
			   const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
@@ -71,15 +85,21 @@ public:
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   // Nc=3 specific kernels
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   void DhopSiteHand(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   template<int Naik> static accelerator_inline
 | 
			
		||||
   void DhopSiteHand(StencilView &st, 
 | 
			
		||||
		     DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, 
 | 
			
		||||
		     SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
		     const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
   void DhopSiteHandInt(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   template<int Naik> static accelerator_inline
 | 
			
		||||
   void DhopSiteHandInt(StencilView &st, 
 | 
			
		||||
			DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, 
 | 
			
		||||
			SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
			const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
   void DhopSiteHandExt(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   template<int Naik> static accelerator_inline
 | 
			
		||||
   void DhopSiteHandExt(StencilView &st, 
 | 
			
		||||
			DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, 
 | 
			
		||||
			SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
			const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
@@ -87,27 +107,11 @@ public:
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   // Asm Nc=3 specific kernels
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   void DhopSiteAsm(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
   
 | 
			
		||||
   void DhopSiteAsm(StencilView &st, 
 | 
			
		||||
		    DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU, 
 | 
			
		||||
		    SiteSpinor * buf, int LLs, int sU, 
 | 
			
		||||
		    const FermionFieldView &in, FermionFieldView &out,int dag);
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   // Generic interface; fan out to right routine
 | 
			
		||||
   ///////////////////////////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
   void DhopSite(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
		 DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, 
 | 
			
		||||
		 SiteSpinor * buf, int LLs, int sU,
 | 
			
		||||
		 const FermionFieldView &in, FermionFieldView &out, int interior=1,int exterior=1);
 | 
			
		||||
 | 
			
		||||
   void DhopSiteDag(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
		    DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, 
 | 
			
		||||
		    SiteSpinor * buf, int LLs, int sU,
 | 
			
		||||
		    const FermionFieldView &in, FermionFieldView &out, int interior=1,int exterior=1);
 | 
			
		||||
 | 
			
		||||
   void DhopSite(StencilImpl &st, LebesgueOrder &lo, 
 | 
			
		||||
		 DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, 
 | 
			
		||||
		 SiteSpinor * buf, int LLs, int sU,
 | 
			
		||||
		 const FermionFieldView &in, FermionFieldView &out, int dag, int interior,int exterior);
 | 
			
		||||
  
 | 
			
		||||
public:
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -113,20 +113,7 @@ public:
 | 
			
		||||
      
 | 
			
		||||
  inline void InsertGaugeField(DoubledGaugeField &U_ds,const GaugeLinkField &U,int mu)
 | 
			
		||||
  {
 | 
			
		||||
    GridBase *GaugeGrid = U_ds.Grid();
 | 
			
		||||
    thread_for(lidx, GaugeGrid->lSites(),{
 | 
			
		||||
 | 
			
		||||
	SiteScalarGaugeLink   ScalarU;
 | 
			
		||||
	SiteDoubledGaugeField ScalarUds;
 | 
			
		||||
	
 | 
			
		||||
	Coordinate lcoor;
 | 
			
		||||
	GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor);
 | 
			
		||||
	peekLocalSite(ScalarUds, U_ds, lcoor);
 | 
			
		||||
	
 | 
			
		||||
	peekLocalSite(ScalarU, U, lcoor);
 | 
			
		||||
	ScalarUds(mu) = ScalarU();
 | 
			
		||||
	
 | 
			
		||||
    });
 | 
			
		||||
    assert(0);
 | 
			
		||||
  }
 | 
			
		||||
  inline void DoubleStore(GridBase *GaugeGrid,
 | 
			
		||||
			  DoubledGaugeField &UUUds, // for Naik term
 | 
			
		||||
 
 | 
			
		||||
@@ -109,9 +109,8 @@ public:
 | 
			
		||||
    ImportGauge(_Umu);
 | 
			
		||||
  }
 | 
			
		||||
 | 
			
		||||
  virtual RealD M(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual RealD Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  virtual void M(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void Mooee(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void MooeeDag(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void MooeeInv(const FermionField &in, FermionField &out);
 | 
			
		||||
@@ -258,15 +257,16 @@ private:
 | 
			
		||||
  CloverFieldType CloverTermDagEven, CloverTermDagOdd;       // Clover term Dag EO
 | 
			
		||||
  CloverFieldType CloverTermInvDagEven, CloverTermInvDagOdd; // Clover term Inv Dag EO
 | 
			
		||||
 | 
			
		||||
 public:
 | 
			
		||||
  // eventually these can be compressed into 6x6 blocks instead of the 12x12
 | 
			
		||||
  // using the DeGrand-Rossi basis for the gamma matrices
 | 
			
		||||
  CloverFieldType fillCloverYZ(const GaugeLinkField &F)
 | 
			
		||||
  {
 | 
			
		||||
    CloverFieldType T(F.Grid());
 | 
			
		||||
    T = Zero();
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView(T_v,T,AcceleratorWrite);
 | 
			
		||||
    autoView(F_v,F,AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 1) = timesMinusI(F_v[i]()());
 | 
			
		||||
      T_v[i]()(1, 0) = timesMinusI(F_v[i]()());
 | 
			
		||||
@@ -282,9 +282,9 @@ private:
 | 
			
		||||
    CloverFieldType T(F.Grid());
 | 
			
		||||
    T = Zero();
 | 
			
		||||
    
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView(T_v, T,AcceleratorWrite);
 | 
			
		||||
    autoView(F_v, F,AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 1) = -F_v[i]()();
 | 
			
		||||
      T_v[i]()(1, 0) = F_v[i]()();
 | 
			
		||||
@@ -300,9 +300,9 @@ private:
 | 
			
		||||
    CloverFieldType T(F.Grid());
 | 
			
		||||
    T = Zero();
 | 
			
		||||
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView(T_v,T,AcceleratorWrite);
 | 
			
		||||
    autoView(F_v,F,AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 0) = timesMinusI(F_v[i]()());
 | 
			
		||||
      T_v[i]()(1, 1) = timesI(F_v[i]()());
 | 
			
		||||
@@ -318,9 +318,9 @@ private:
 | 
			
		||||
    CloverFieldType T(F.Grid());
 | 
			
		||||
    T = Zero();
 | 
			
		||||
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView( T_v , T, AcceleratorWrite);
 | 
			
		||||
    autoView( F_v , F, AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 1) = timesI(F_v[i]()());
 | 
			
		||||
      T_v[i]()(1, 0) = timesI(F_v[i]()());
 | 
			
		||||
@@ -336,9 +336,9 @@ private:
 | 
			
		||||
    CloverFieldType T(F.Grid());
 | 
			
		||||
    T = Zero();
 | 
			
		||||
    
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView( T_v ,T,AcceleratorWrite);
 | 
			
		||||
    autoView( F_v ,F,AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 1) = -(F_v[i]()());
 | 
			
		||||
      T_v[i]()(1, 0) = (F_v[i]()());
 | 
			
		||||
@@ -355,9 +355,9 @@ private:
 | 
			
		||||
 | 
			
		||||
    T = Zero();
 | 
			
		||||
 | 
			
		||||
    auto T_v = T.View();
 | 
			
		||||
    auto F_v = F.View();
 | 
			
		||||
    thread_for(i, CloverTerm.Grid()->oSites(),
 | 
			
		||||
    autoView( T_v , T,AcceleratorWrite);
 | 
			
		||||
    autoView( F_v , F,AcceleratorRead);
 | 
			
		||||
    accelerator_for(i, CloverTerm.Grid()->oSites(),1,
 | 
			
		||||
    {
 | 
			
		||||
      T_v[i]()(0, 0) = timesI(F_v[i]()());
 | 
			
		||||
      T_v[i]()(1, 1) = timesMinusI(F_v[i]()());
 | 
			
		||||
 
 | 
			
		||||
@@ -50,14 +50,14 @@ public:
 | 
			
		||||
  double, nu);
 | 
			
		||||
 | 
			
		||||
  WilsonAnisotropyCoefficients():
 | 
			
		||||
    isAnisotropic(false), 
 | 
			
		||||
    t_direction(Nd-1), 
 | 
			
		||||
    xi_0(1.0), 
 | 
			
		||||
    isAnisotropic(false),
 | 
			
		||||
    t_direction(Nd-1),
 | 
			
		||||
    xi_0(1.0),
 | 
			
		||||
    nu(1.0){}
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
template <class Impl>
 | 
			
		||||
class WilsonFermion : public WilsonKernels<Impl>, public WilsonFermionStatic 
 | 
			
		||||
class WilsonFermion : public WilsonKernels<Impl>, public WilsonFermionStatic
 | 
			
		||||
{
 | 
			
		||||
public:
 | 
			
		||||
  INHERIT_IMPL_TYPES(Impl);
 | 
			
		||||
@@ -74,12 +74,26 @@ public:
 | 
			
		||||
  FermionField _tmp;
 | 
			
		||||
  FermionField &tmp(void) { return _tmp; }
 | 
			
		||||
 | 
			
		||||
  void Report(void);
 | 
			
		||||
  void ZeroCounters(void);
 | 
			
		||||
  double DhopCalls;
 | 
			
		||||
  double DhopCommTime;
 | 
			
		||||
  double DhopComputeTime;
 | 
			
		||||
  double DhopComputeTime2;
 | 
			
		||||
  double DhopFaceTime;
 | 
			
		||||
  double DhopTotalTime;
 | 
			
		||||
 | 
			
		||||
  double DerivCalls;
 | 
			
		||||
  double DerivCommTime;
 | 
			
		||||
  double DerivComputeTime;
 | 
			
		||||
  double DerivDhopComputeTime;
 | 
			
		||||
 | 
			
		||||
  //////////////////////////////////////////////////////////////////
 | 
			
		||||
  // override multiply; cut number routines if pass dagger argument
 | 
			
		||||
  // and also make interface more uniformly consistent
 | 
			
		||||
  //////////////////////////////////////////////////////////////////
 | 
			
		||||
  virtual RealD M(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual RealD Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void  M(const FermionField &in, FermionField &out);
 | 
			
		||||
  virtual void  Mdag(const FermionField &in, FermionField &out);
 | 
			
		||||
 | 
			
		||||
  /////////////////////////////////////////////////////////
 | 
			
		||||
  // half checkerboard operations
 | 
			
		||||
@@ -138,7 +152,7 @@ public:
 | 
			
		||||
  // Constructor
 | 
			
		||||
  WilsonFermion(GaugeField &_Umu, GridCartesian &Fgrid,
 | 
			
		||||
                GridRedBlackCartesian &Hgrid, RealD _mass,
 | 
			
		||||
                const ImplParams &p = ImplParams(), 
 | 
			
		||||
                const ImplParams &p = ImplParams(),
 | 
			
		||||
                const WilsonAnisotropyCoefficients &anis = WilsonAnisotropyCoefficients() );
 | 
			
		||||
 | 
			
		||||
  // DoubleStore impl dependent
 | 
			
		||||
@@ -170,29 +184,29 @@ public:
 | 
			
		||||
 | 
			
		||||
  LebesgueOrder Lebesgue;
 | 
			
		||||
  LebesgueOrder LebesgueEvenOdd;
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  WilsonAnisotropyCoefficients anisotropyCoeff;
 | 
			
		||||
  
 | 
			
		||||
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Conserved current utilities
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
                                PropagatorField &q_in_2,
 | 
			
		||||
                                PropagatorField &q_out,
 | 
			
		||||
                                PropagatorField &phys_src,
 | 
			
		||||
                                Current curr_type,
 | 
			
		||||
                                unsigned int mu);
 | 
			
		||||
  void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
                           PropagatorField &q_out,
 | 
			
		||||
                           PropagatorField &phys_src,
 | 
			
		||||
                           Current curr_type,
 | 
			
		||||
                           unsigned int mu, 
 | 
			
		||||
                           unsigned int mu,
 | 
			
		||||
                           unsigned int tmin,
 | 
			
		||||
                             unsigned int tmax,
 | 
			
		||||
			     ComplexField &lattice_cmplx);
 | 
			
		||||
			   unsigned int tmax,
 | 
			
		||||
			   ComplexField &lattice_cmplx);
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
typedef WilsonFermion<WilsonImplF> WilsonFermionF;
 | 
			
		||||
typedef WilsonFermion<WilsonImplD> WilsonFermionD;
 | 
			
		||||
 | 
			
		||||
NAMESPACE_END(Grid);
 | 
			
		||||
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -1,4 +1,3 @@
 | 
			
		||||
 | 
			
		||||
/*************************************************************************************
 | 
			
		||||
 | 
			
		||||
    Grid physics library, www.github.com/paboyle/Grid 
 | 
			
		||||
@@ -99,8 +98,8 @@ public:
 | 
			
		||||
  GridBase *FermionRedBlackGrid(void)    { return _FiveDimRedBlackGrid;}
 | 
			
		||||
 | 
			
		||||
  // full checkerboard operations; leave unimplemented as abstract for now
 | 
			
		||||
  virtual RealD  M    (const FermionField &in, FermionField &out){assert(0); return 0.0;};
 | 
			
		||||
  virtual RealD  Mdag (const FermionField &in, FermionField &out){assert(0); return 0.0;};
 | 
			
		||||
  virtual void   M    (const FermionField &in, FermionField &out){assert(0);};
 | 
			
		||||
  virtual void   Mdag (const FermionField &in, FermionField &out){assert(0);};
 | 
			
		||||
 | 
			
		||||
  // half checkerboard operations; leave unimplemented as abstract for now
 | 
			
		||||
  virtual void   Meooe       (const FermionField &in, FermionField &out){assert(0);};
 | 
			
		||||
@@ -216,26 +215,8 @@ public:
 | 
			
		||||
  LebesgueOrder LebesgueEvenOdd;
 | 
			
		||||
    
 | 
			
		||||
  // Comms buffer
 | 
			
		||||
  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;
 | 
			
		||||
    
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  // Conserved current utilities
 | 
			
		||||
  ///////////////////////////////////////////////////////////////
 | 
			
		||||
  void ContractConservedCurrent(PropagatorField &q_in_1,
 | 
			
		||||
				PropagatorField &q_in_2,
 | 
			
		||||
				PropagatorField &q_out,
 | 
			
		||||
				Current curr_type, 
 | 
			
		||||
				unsigned int mu);
 | 
			
		||||
  void SeqConservedCurrent(PropagatorField &q_in,
 | 
			
		||||
			   PropagatorField &q_out,
 | 
			
		||||
			   Current curr_type,
 | 
			
		||||
			   unsigned int mu,
 | 
			
		||||
			   unsigned int tmin,
 | 
			
		||||
			   unsigned int tmax,
 | 
			
		||||
			   ComplexField &lattice_cmplx);
 | 
			
		||||
  //  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf;
 | 
			
		||||
 | 
			
		||||
  void ContractJ5q(PropagatorField &q_in,ComplexField &J5q);
 | 
			
		||||
  void ContractJ5q(FermionField &q_in,ComplexField &J5q);
 | 
			
		||||
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -41,6 +41,7 @@ public:
 | 
			
		||||
  static const int Dimension = Representation::Dimension;
 | 
			
		||||
  static const bool isFundamental = Representation::isFundamental;
 | 
			
		||||
  static const bool LsVectorised=false;
 | 
			
		||||
  static const bool isGparity=false;
 | 
			
		||||
  static const int Nhcs = Options::Nhcs;
 | 
			
		||||
 | 
			
		||||
  typedef PeriodicGaugeImpl<GaugeImplTypes<S, Dimension > > Gimpl;
 | 
			
		||||
@@ -98,8 +99,21 @@ public:
 | 
			
		||||
  {
 | 
			
		||||
    multLink(phi,U,chi,mu);
 | 
			
		||||
  }
 | 
			
		||||
    
 | 
			
		||||
      
 | 
			
		||||
 | 
			
		||||
  template<class _SpinorField> 
 | 
			
		||||
  inline void multLinkField(_SpinorField & out,
 | 
			
		||||
			    const DoubledGaugeField &Umu,
 | 
			
		||||
			    const _SpinorField & phi,
 | 
			
		||||
			    int mu)
 | 
			
		||||
  {
 | 
			
		||||
    autoView( out_v, out, AcceleratorWrite);
 | 
			
		||||
    autoView( phi_v, phi, AcceleratorRead);
 | 
			
		||||
    autoView( Umu_v, Umu, AcceleratorRead);
 | 
			
		||||
    accelerator_for(sss,out.Grid()->oSites(),1,{
 | 
			
		||||
	multLink(out_v[sss],Umu_v[sss],phi_v[sss],mu);
 | 
			
		||||
    });
 | 
			
		||||
  }
 | 
			
		||||
					   
 | 
			
		||||
  template <class ref>
 | 
			
		||||
  static accelerator_inline void loadLinkElement(Simd ®, ref &memory) 
 | 
			
		||||
  {
 | 
			
		||||
@@ -177,18 +191,19 @@ public:
 | 
			
		||||
    int Ls=Btilde.Grid()->_fdimensions[0];
 | 
			
		||||
    GaugeLinkField tmp(mat.Grid());
 | 
			
		||||
    tmp = Zero();
 | 
			
		||||
    auto tmp_v = tmp.View();
 | 
			
		||||
    auto Btilde_v = Btilde.View();
 | 
			
		||||
    auto Atilde_v = Atilde.View();
 | 
			
		||||
    thread_for(sss,tmp.Grid()->oSites(),{
 | 
			
		||||
      int sU=sss;
 | 
			
		||||
      for(int s=0;s<Ls;s++){
 | 
			
		||||
	int sF = s+Ls*sU;
 | 
			
		||||
	tmp_v[sU] = tmp_v[sU]+ traceIndex<SpinIndex>(outerProduct(Btilde_v[sF],Atilde_v[sF])); // ordering here
 | 
			
		||||
      }
 | 
			
		||||
    });
 | 
			
		||||
    {
 | 
			
		||||
      autoView( tmp_v , tmp, AcceleratorWrite);
 | 
			
		||||
      autoView( Btilde_v , Btilde, AcceleratorRead);
 | 
			
		||||
      autoView( Atilde_v , Atilde, AcceleratorRead);
 | 
			
		||||
      accelerator_for(sss,tmp.Grid()->oSites(),1,{
 | 
			
		||||
	  int sU=sss;
 | 
			
		||||
	  for(int s=0;s<Ls;s++){
 | 
			
		||||
	    int sF = s+Ls*sU;
 | 
			
		||||
	    tmp_v[sU] = tmp_v[sU]+ traceIndex<SpinIndex>(outerProduct(Btilde_v[sF],Atilde_v[sF])); // ordering here
 | 
			
		||||
	  }
 | 
			
		||||
	});
 | 
			
		||||
    }
 | 
			
		||||
    PokeIndex<LorentzIndex>(mat,tmp,mu);
 | 
			
		||||
      
 | 
			
		||||
  }
 | 
			
		||||
};
 | 
			
		||||
 | 
			
		||||
 
 | 
			
		||||
@@ -66,41 +66,6 @@ public:
 | 
			
		||||
  static void DhopDirKernel(StencilImpl &st, DoubledGaugeField &U,SiteHalfSpinor * buf,
 | 
			
		||||
			    int Ls, int Nsite, const FermionField &in, FermionField &out, int dirdisp, int gamma);
 | 
			
		||||
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  // Utilities for inserting Wilson conserved current.
 | 
			
		||||
  //////////////////////////////////////////////////////////////////////////////
 | 
			
		||||
  static void ContractConservedCurrentSiteFwd(const SitePropagator &q_in_1,
 | 
			
		||||
                                       const SitePropagator &q_in_2,
 | 
			
		||||
                                       SitePropagator &q_out,
 | 
			
		||||
                                       DoubledGaugeFieldView &U,
 | 
			
		||||
                                       unsigned int sU,
 | 
			
		||||
                                       unsigned int mu,
 | 
			
		||||
                                       bool switch_sign = false);
 | 
			
		||||
 | 
			
		||||
  static void ContractConservedCurrentSiteBwd(const SitePropagator &q_in_1,
 | 
			
		||||
                                       const SitePropagator &q_in_2,
 | 
			
		||||
                                       SitePropagator &q_out,
 | 
			
		||||
                                       DoubledGaugeFieldView &U,
 | 
			
		||||
                                       unsigned int sU,
 | 
			
		||||
                                       unsigned int mu,
 | 
			
		||||
                                       bool switch_sign = false);
 | 
			
		||||
 | 
			
		||||
  static void SeqConservedCurrentSiteFwd(const SitePropagator &q_in, 
 | 
			
		||||
                                  SitePropagator &q_out,
 | 
			
		||||
                                  DoubledGaugeFieldView &U,
 | 
			
		||||
                                  unsigned int sU,
 | 
			
		||||
                                  unsigned int mu,
 | 
			
		||||
                                  vPredicate t_mask,
 | 
			
		||||
                                  bool switch_sign = false);
 | 
			
		||||
 | 
			
		||||
  static void SeqConservedCurrentSiteBwd(const SitePropagator &q_in,
 | 
			
		||||
                                  SitePropagator &q_out,
 | 
			
		||||
                                  DoubledGaugeFieldView &U,
 | 
			
		||||
                                  unsigned int sU,
 | 
			
		||||
                                  unsigned int mu,
 | 
			
		||||
                                  vPredicate t_mask,
 | 
			
		||||
                                  bool switch_sign = false);
 | 
			
		||||
 | 
			
		||||
private:
 | 
			
		||||
 | 
			
		||||
  static accelerator_inline void DhopDirK(StencilView &st, DoubledGaugeFieldView &U,SiteHalfSpinor * buf,
 | 
			
		||||
 
 | 
			
		||||
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