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@ -9,11 +9,6 @@ matrix:
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- os: osx
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osx_image: xcode8.3
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compiler: clang
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env: PREC=single
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- os: osx
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osx_image: xcode8.3
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compiler: clang
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env: PREC=double
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before_install:
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- export GRIDDIR=`pwd`
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||||
@ -55,7 +50,7 @@ script:
|
||||
- make -j4
|
||||
- make install
|
||||
- cd $CWD/build
|
||||
- ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF}
|
||||
- ../configure --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF}
|
||||
- make -j4
|
||||
- ./benchmarks/Benchmark_dwf --threads 1 --debug-signals
|
||||
- make check
|
||||
|
@ -37,7 +37,9 @@ directory
|
||||
#endif
|
||||
|
||||
//disables and intel compiler specific warning (in json.hpp)
|
||||
#ifdef __ICC
|
||||
#pragma warning disable 488
|
||||
#endif
|
||||
|
||||
#ifdef __NVCC__
|
||||
//disables nvcc specific warning in json.hpp
|
||||
|
@ -47,9 +47,9 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/perfmon/PerfCount.h>
|
||||
#include <Grid/util/Util.h>
|
||||
#include <Grid/log/Log.h>
|
||||
#include <Grid/allocator/AlignedAllocator.h>
|
||||
#include <Grid/allocator/Allocator.h>
|
||||
#include <Grid/simd/Simd.h>
|
||||
#include <Grid/threads/Threads.h>
|
||||
#include <Grid/threads/ThreadReduction.h>
|
||||
#include <Grid/serialisation/Serialisation.h>
|
||||
#include <Grid/util/Sha.h>
|
||||
#include <Grid/communicator/Communicator.h>
|
||||
|
@ -6,6 +6,7 @@
|
||||
///////////////////
|
||||
#include <cassert>
|
||||
#include <complex>
|
||||
#include <memory>
|
||||
#include <vector>
|
||||
#include <array>
|
||||
#include <string>
|
||||
@ -27,4 +28,7 @@
|
||||
///////////////////
|
||||
#include "Config.h"
|
||||
|
||||
#ifdef TOFU
|
||||
#undef GRID_COMMS_THREADS
|
||||
#endif
|
||||
#endif /* GRID_STD_H */
|
||||
|
@ -18,12 +18,29 @@
|
||||
#pragma push_macro("__CUDA_ARCH__")
|
||||
#pragma push_macro("__NVCC__")
|
||||
#pragma push_macro("__CUDACC__")
|
||||
#undef __CUDA_ARCH__
|
||||
#undef __NVCC__
|
||||
#undef __CUDACC__
|
||||
#undef __CUDA_ARCH__
|
||||
#define __NVCC__REDEFINE__
|
||||
#endif
|
||||
|
||||
/* SYCL save and restore compile environment*/
|
||||
#ifdef GRID_SYCL
|
||||
#pragma push
|
||||
#pragma push_macro("__SYCL_DEVICE_ONLY__")
|
||||
#undef __SYCL_DEVICE_ONLY__
|
||||
#define EIGEN_DONT_VECTORIZE
|
||||
//#undef EIGEN_USE_SYCL
|
||||
#define __SYCL__REDEFINE__
|
||||
#endif
|
||||
|
||||
/* HIP save and restore compile environment*/
|
||||
#ifdef GRID_HIP
|
||||
#pragma push
|
||||
#pragma push_macro("__HIP_DEVICE_COMPILE__")
|
||||
#endif
|
||||
#define EIGEN_NO_HIP
|
||||
|
||||
#include <Grid/Eigen/Dense>
|
||||
#include <Grid/Eigen/unsupported/CXX11/Tensor>
|
||||
|
||||
@ -35,7 +52,20 @@
|
||||
#pragma pop
|
||||
#endif
|
||||
|
||||
/*SYCL restore*/
|
||||
#ifdef __SYCL__REDEFINE__
|
||||
#pragma pop_macro("__SYCL_DEVICE_ONLY__")
|
||||
#pragma pop
|
||||
#endif
|
||||
|
||||
/*HIP restore*/
|
||||
#ifdef __HIP__REDEFINE__
|
||||
#pragma pop_macro("__HIP_DEVICE_COMPILE__")
|
||||
#pragma pop
|
||||
#endif
|
||||
|
||||
#if defined __GNUC__
|
||||
#pragma GCC diagnostic pop
|
||||
#endif
|
||||
|
||||
|
||||
|
@ -21,7 +21,8 @@ if BUILD_HDF5
|
||||
extra_headers+=serialisation/Hdf5Type.h
|
||||
endif
|
||||
|
||||
all: version-cache
|
||||
|
||||
all: version-cache Version.h
|
||||
|
||||
version-cache:
|
||||
@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\
|
||||
@ -42,7 +43,7 @@ version-cache:
|
||||
fi;\
|
||||
rm -f vertmp
|
||||
|
||||
Version.h:
|
||||
Version.h: version-cache
|
||||
cp version-cache Version.h
|
||||
|
||||
.PHONY: version-cache
|
||||
@ -53,6 +54,19 @@ Version.h:
|
||||
include Make.inc
|
||||
include Eigen.inc
|
||||
|
||||
extra_sources+=$(WILS_FERMION_FILES)
|
||||
extra_sources+=$(STAG_FERMION_FILES)
|
||||
if BUILD_ZMOBIUS
|
||||
extra_sources+=$(ZWILS_FERMION_FILES)
|
||||
endif
|
||||
if BUILD_GPARITY
|
||||
extra_sources+=$(GP_FERMION_FILES)
|
||||
endif
|
||||
if BUILD_FERMION_REPS
|
||||
extra_sources+=$(ADJ_FERMION_FILES)
|
||||
extra_sources+=$(TWOIND_FERMION_FILES)
|
||||
endif
|
||||
|
||||
lib_LIBRARIES = libGrid.a
|
||||
|
||||
CCFILES += $(extra_sources)
|
||||
|
@ -29,9 +29,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#ifndef GRID_ALGORITHMS_H
|
||||
#define GRID_ALGORITHMS_H
|
||||
|
||||
NAMESPACE_CHECK(algorithms);
|
||||
#include <Grid/algorithms/SparseMatrix.h>
|
||||
#include <Grid/algorithms/LinearOperator.h>
|
||||
#include <Grid/algorithms/Preconditioner.h>
|
||||
NAMESPACE_CHECK(SparseMatrix);
|
||||
|
||||
#include <Grid/algorithms/approx/Zolotarev.h>
|
||||
#include <Grid/algorithms/approx/Chebyshev.h>
|
||||
@ -39,14 +41,20 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/algorithms/approx/Remez.h>
|
||||
#include <Grid/algorithms/approx/MultiShiftFunction.h>
|
||||
#include <Grid/algorithms/approx/Forecast.h>
|
||||
|
||||
#include <Grid/algorithms/approx/RemezGeneral.h>
|
||||
#include <Grid/algorithms/approx/ZMobius.h>
|
||||
NAMESPACE_CHECK(approx);
|
||||
#include <Grid/algorithms/iterative/Deflation.h>
|
||||
#include <Grid/algorithms/iterative/ConjugateGradient.h>
|
||||
NAMESPACE_CHECK(ConjGrad);
|
||||
#include <Grid/algorithms/iterative/BiCGSTAB.h>
|
||||
NAMESPACE_CHECK(BiCGSTAB);
|
||||
#include <Grid/algorithms/iterative/ConjugateResidual.h>
|
||||
#include <Grid/algorithms/iterative/NormalEquations.h>
|
||||
#include <Grid/algorithms/iterative/SchurRedBlack.h>
|
||||
#include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h>
|
||||
#include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h>
|
||||
#include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h>
|
||||
#include <Grid/algorithms/iterative/BlockConjugateGradient.h>
|
||||
#include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h>
|
||||
#include <Grid/algorithms/iterative/MinimalResidual.h>
|
||||
@ -58,7 +66,9 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h>
|
||||
#include <Grid/algorithms/iterative/PowerMethod.h>
|
||||
|
||||
NAMESPACE_CHECK(PowerMethod);
|
||||
#include <Grid/algorithms/CoarsenedMatrix.h>
|
||||
NAMESPACE_CHECK(CoarsendMatrix);
|
||||
#include <Grid/algorithms/FFT.h>
|
||||
|
||||
#endif
|
||||
|
File diff suppressed because it is too large
Load Diff
@ -1,4 +1,3 @@
|
||||
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
@ -37,7 +36,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#endif
|
||||
#endif
|
||||
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class scalar> struct FFTW { };
|
||||
@ -191,7 +189,7 @@ public:
|
||||
typedef typename sobj::scalar_type scalar;
|
||||
|
||||
Lattice<sobj> pgbuf(&pencil_g);
|
||||
auto pgbuf_v = pgbuf.View();
|
||||
autoView(pgbuf_v , pgbuf, CpuWrite);
|
||||
|
||||
typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar;
|
||||
typedef typename FFTW<scalar>::FFTW_plan FFTW_plan;
|
||||
@ -232,15 +230,18 @@ public:
|
||||
result = source;
|
||||
int pc = processor_coor[dim];
|
||||
for(int p=0;p<processors[dim];p++) {
|
||||
thread_for(idx, sgrid->lSites(),{
|
||||
{
|
||||
autoView(r_v,result,CpuRead);
|
||||
autoView(p_v,pgbuf,CpuWrite);
|
||||
thread_for(idx, sgrid->lSites(),{
|
||||
Coordinate cbuf(Nd);
|
||||
sobj s;
|
||||
sgrid->LocalIndexToLocalCoor(idx,cbuf);
|
||||
peekLocalSite(s,result,cbuf);
|
||||
peekLocalSite(s,r_v,cbuf);
|
||||
cbuf[dim]+=((pc+p) % processors[dim])*L;
|
||||
// cbuf[dim]+=p*L;
|
||||
pokeLocalSite(s,pgbuf,cbuf);
|
||||
});
|
||||
pokeLocalSite(s,p_v,cbuf);
|
||||
});
|
||||
}
|
||||
if (p != processors[dim] - 1) {
|
||||
result = Cshift(result,dim,L);
|
||||
}
|
||||
@ -269,15 +270,19 @@ public:
|
||||
flops+= flops_call*NN;
|
||||
|
||||
// writing out result
|
||||
thread_for(idx,sgrid->lSites(),{
|
||||
{
|
||||
autoView(pgbuf_v,pgbuf,CpuRead);
|
||||
autoView(result_v,result,CpuWrite);
|
||||
thread_for(idx,sgrid->lSites(),{
|
||||
Coordinate clbuf(Nd), cgbuf(Nd);
|
||||
sobj s;
|
||||
sgrid->LocalIndexToLocalCoor(idx,clbuf);
|
||||
cgbuf = clbuf;
|
||||
cgbuf[dim] = clbuf[dim]+L*pc;
|
||||
peekLocalSite(s,pgbuf,cgbuf);
|
||||
pokeLocalSite(s,result,clbuf);
|
||||
});
|
||||
peekLocalSite(s,pgbuf_v,cgbuf);
|
||||
pokeLocalSite(s,result_v,clbuf);
|
||||
});
|
||||
}
|
||||
result = result*div;
|
||||
|
||||
// destroying plan
|
||||
|
@ -43,7 +43,6 @@ NAMESPACE_BEGIN(Grid);
|
||||
/////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class Field> class LinearOperatorBase {
|
||||
public:
|
||||
|
||||
// Support for coarsening to a multigrid
|
||||
virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base
|
||||
virtual void OpDir (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base
|
||||
@ -94,7 +93,10 @@ public:
|
||||
_Mat.Mdag(in,out);
|
||||
}
|
||||
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
_Mat.MdagM(in,out,n1,n2);
|
||||
_Mat.MdagM(in,out);
|
||||
ComplexD dot = innerProduct(in,out);
|
||||
n1=real(dot);
|
||||
n2=norm2(out);
|
||||
}
|
||||
void HermOp(const Field &in, Field &out){
|
||||
_Mat.MdagM(in,out);
|
||||
@ -131,17 +133,14 @@ public:
|
||||
assert(0);
|
||||
}
|
||||
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
_Mat.MdagM(in,out,n1,n2);
|
||||
out = out + _shift*in;
|
||||
|
||||
ComplexD dot;
|
||||
dot= innerProduct(in,out);
|
||||
HermOp(in,out);
|
||||
ComplexD dot = innerProduct(in,out);
|
||||
n1=real(dot);
|
||||
n2=norm2(out);
|
||||
}
|
||||
void HermOp(const Field &in, Field &out){
|
||||
RealD n1,n2;
|
||||
HermOpAndNorm(in,out,n1,n2);
|
||||
_Mat.MdagM(in,out);
|
||||
out = out + _shift*in;
|
||||
}
|
||||
};
|
||||
|
||||
@ -170,7 +169,7 @@ public:
|
||||
_Mat.M(in,out);
|
||||
}
|
||||
void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
_Mat.M(in,out);
|
||||
HermOp(in,out);
|
||||
ComplexD dot= innerProduct(in,out); n1=real(dot);
|
||||
n2=norm2(out);
|
||||
}
|
||||
@ -208,212 +207,305 @@ public:
|
||||
}
|
||||
};
|
||||
|
||||
//////////////////////////////////////////////////////////
|
||||
// Even Odd Schur decomp operators; there are several
|
||||
// ways to introduce the even odd checkerboarding
|
||||
//////////////////////////////////////////////////////////
|
||||
//////////////////////////////////////////////////////////
|
||||
// Even Odd Schur decomp operators; there are several
|
||||
// ways to introduce the even odd checkerboarding
|
||||
//////////////////////////////////////////////////////////
|
||||
|
||||
template<class Field>
|
||||
class SchurOperatorBase : public LinearOperatorBase<Field> {
|
||||
public:
|
||||
virtual RealD Mpc (const Field &in, Field &out) =0;
|
||||
virtual RealD MpcDag (const Field &in, Field &out) =0;
|
||||
virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = in.Checkerboard();
|
||||
ni=Mpc(in,tmp);
|
||||
no=MpcDag(tmp,out);
|
||||
}
|
||||
virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
out.Checkerboard() = in.Checkerboard();
|
||||
MpcDagMpc(in,out,n1,n2);
|
||||
}
|
||||
virtual void HermOp(const Field &in, Field &out){
|
||||
RealD n1,n2;
|
||||
HermOpAndNorm(in,out,n1,n2);
|
||||
}
|
||||
void Op (const Field &in, Field &out){
|
||||
Mpc(in,out);
|
||||
}
|
||||
void AdjOp (const Field &in, Field &out){
|
||||
MpcDag(in,out);
|
||||
}
|
||||
// Support for coarsening to a multigrid
|
||||
void OpDiag (const Field &in, Field &out) {
|
||||
assert(0); // must coarsen the unpreconditioned system
|
||||
}
|
||||
void OpDir (const Field &in, Field &out,int dir,int disp) {
|
||||
assert(0);
|
||||
}
|
||||
void OpDirAll (const Field &in, std::vector<Field> &out){
|
||||
assert(0);
|
||||
};
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagMooeeOperator : public SchurOperatorBase<Field> {
|
||||
public:
|
||||
Matrix &_Mat;
|
||||
SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){};
|
||||
virtual RealD Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = !in.Checkerboard();
|
||||
//std::cout <<"grid pointers: in._grid="<< in._grid << " out._grid=" << out._grid << " _Mat.Grid=" << _Mat.Grid() << " _Mat.RedBlackGrid=" << _Mat.RedBlackGrid() << std::endl;
|
||||
|
||||
_Mat.Meooe(in,tmp);
|
||||
_Mat.MooeeInv(tmp,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
|
||||
//std::cout << "cb in " << in.Checkerboard() << " cb out " << out.Checkerboard() << std::endl;
|
||||
_Mat.Mooee(in,out);
|
||||
return axpy_norm(out,-1.0,tmp,out);
|
||||
}
|
||||
virtual RealD MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in,tmp);
|
||||
_Mat.MooeeInvDag(tmp,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
|
||||
_Mat.MooeeDag(in,out);
|
||||
return axpy_norm(out,-1.0,tmp,out);
|
||||
}
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagOneOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
public:
|
||||
SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){};
|
||||
|
||||
virtual RealD Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.Meooe(in,out);
|
||||
_Mat.MooeeInv(out,tmp);
|
||||
_Mat.Meooe(tmp,out);
|
||||
_Mat.MooeeInv(out,tmp);
|
||||
|
||||
return axpy_norm(out,-1.0,tmp,in);
|
||||
}
|
||||
virtual RealD MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInvDag(in,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
_Mat.MooeeInvDag(tmp,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
|
||||
return axpy_norm(out,-1.0,tmp,in);
|
||||
}
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagTwoOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
public:
|
||||
SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){};
|
||||
|
||||
virtual RealD Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInv(in,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
_Mat.MooeeInv(tmp,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
|
||||
return axpy_norm(out,-1.0,tmp,in);
|
||||
}
|
||||
virtual RealD MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in,out);
|
||||
_Mat.MooeeInvDag(out,tmp);
|
||||
_Mat.MeooeDag(tmp,out);
|
||||
_Mat.MooeeInvDag(out,tmp);
|
||||
|
||||
return axpy_norm(out,-1.0,tmp,in);
|
||||
}
|
||||
};
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Left handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta --> ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta
|
||||
// Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta --> ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ;
|
||||
template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ;
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Staggered use
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class Matrix,class Field>
|
||||
class SchurStaggeredOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
Field tmp;
|
||||
RealD mass;
|
||||
double tMpc;
|
||||
double tIP;
|
||||
double tMeo;
|
||||
double taxpby_norm;
|
||||
uint64_t ncall;
|
||||
public:
|
||||
void Report(void)
|
||||
{
|
||||
std::cout << GridLogMessage << " HermOpAndNorm.Mpc "<< tMpc/ncall<<" usec "<<std::endl;
|
||||
std::cout << GridLogMessage << " HermOpAndNorm.IP "<< tIP /ncall<<" usec "<<std::endl;
|
||||
std::cout << GridLogMessage << " Mpc.MeoMoe "<< tMeo/ncall<<" usec "<<std::endl;
|
||||
std::cout << GridLogMessage << " Mpc.axpby_norm "<< taxpby_norm/ncall<<" usec "<<std::endl;
|
||||
}
|
||||
SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())
|
||||
{
|
||||
assert( _Mat.isTrivialEE() );
|
||||
mass = _Mat.Mass();
|
||||
tMpc=0;
|
||||
tIP =0;
|
||||
tMeo=0;
|
||||
taxpby_norm=0;
|
||||
ncall=0;
|
||||
}
|
||||
template<class Field>
|
||||
class SchurOperatorBase : public LinearOperatorBase<Field> {
|
||||
public:
|
||||
virtual void Mpc (const Field &in, Field &out) =0;
|
||||
virtual void MpcDag (const Field &in, Field &out) =0;
|
||||
virtual void MpcDagMpc(const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = in.Checkerboard();
|
||||
Mpc(in,tmp);
|
||||
MpcDag(tmp,out);
|
||||
}
|
||||
virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
ncall++;
|
||||
tMpc-=usecond();
|
||||
n2 = Mpc(in,out);
|
||||
tMpc+=usecond();
|
||||
tIP-=usecond();
|
||||
ComplexD dot= innerProduct(in,out);
|
||||
tIP+=usecond();
|
||||
n1 = real(dot);
|
||||
out.Checkerboard() = in.Checkerboard();
|
||||
MpcDagMpc(in,out);
|
||||
ComplexD dot= innerProduct(in,out);
|
||||
n1=real(dot);
|
||||
n2=norm2(out);
|
||||
}
|
||||
virtual void HermOp(const Field &in, Field &out){
|
||||
ncall++;
|
||||
tMpc-=usecond();
|
||||
_Mat.Meooe(in,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
tMpc+=usecond();
|
||||
taxpby_norm-=usecond();
|
||||
axpby(out,-1.0,mass*mass,tmp,in);
|
||||
taxpby_norm+=usecond();
|
||||
out.Checkerboard() = in.Checkerboard();
|
||||
MpcDagMpc(in,out);
|
||||
}
|
||||
virtual RealD Mpc (const Field &in, Field &out)
|
||||
{
|
||||
void Op (const Field &in, Field &out){
|
||||
Mpc(in,out);
|
||||
}
|
||||
void AdjOp (const Field &in, Field &out){
|
||||
MpcDag(in,out);
|
||||
}
|
||||
// Support for coarsening to a multigrid
|
||||
void OpDiag (const Field &in, Field &out) {
|
||||
assert(0); // must coarsen the unpreconditioned system
|
||||
}
|
||||
void OpDir (const Field &in, Field &out,int dir,int disp) {
|
||||
assert(0);
|
||||
}
|
||||
void OpDirAll (const Field &in, std::vector<Field> &out){
|
||||
assert(0);
|
||||
};
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagMooeeOperator : public SchurOperatorBase<Field> {
|
||||
public:
|
||||
Matrix &_Mat;
|
||||
SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){};
|
||||
virtual void Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = !in.Checkerboard();
|
||||
|
||||
_Mat.Meooe(in,tmp);
|
||||
_Mat.MooeeInv(tmp,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
_Mat.Mooee(in,out);
|
||||
axpy(out,-1.0,tmp,out);
|
||||
}
|
||||
virtual void MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in,tmp);
|
||||
_Mat.MooeeInvDag(tmp,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
_Mat.MooeeDag(in,out);
|
||||
axpy(out,-1.0,tmp,out);
|
||||
}
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagOneOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
public:
|
||||
SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){};
|
||||
|
||||
virtual void Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.Meooe(in,out);
|
||||
_Mat.MooeeInv(out,tmp);
|
||||
_Mat.Meooe(tmp,out);
|
||||
_Mat.MooeeInv(out,tmp);
|
||||
axpy(out,-1.0,tmp,in);
|
||||
}
|
||||
virtual void MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInvDag(in,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
_Mat.MooeeInvDag(tmp,out);
|
||||
_Mat.MeooeDag(out,tmp);
|
||||
axpy(out,-1.0,tmp,in);
|
||||
}
|
||||
};
|
||||
template<class Matrix,class Field>
|
||||
class SchurDiagTwoOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
public:
|
||||
SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){};
|
||||
|
||||
virtual void Mpc (const Field &in, Field &out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInv(in,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
_Mat.MooeeInv(tmp,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
|
||||
axpy(out,-1.0,tmp,in);
|
||||
}
|
||||
virtual void MpcDag (const Field &in, Field &out){
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in,out);
|
||||
_Mat.MooeeInvDag(out,tmp);
|
||||
_Mat.MeooeDag(tmp,out);
|
||||
_Mat.MooeeInvDag(out,tmp);
|
||||
|
||||
axpy(out,-1.0,tmp,in);
|
||||
}
|
||||
};
|
||||
|
||||
template<class Field>
|
||||
class NonHermitianSchurOperatorBase : public LinearOperatorBase<Field>
|
||||
{
|
||||
public:
|
||||
virtual void Mpc (const Field& in, Field& out) = 0;
|
||||
virtual void MpcDag (const Field& in, Field& out) = 0;
|
||||
virtual void MpcDagMpc(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = in.Checkerboard();
|
||||
Mpc(in,tmp);
|
||||
MpcDag(tmp,out);
|
||||
}
|
||||
virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) {
|
||||
assert(0);
|
||||
}
|
||||
virtual void HermOp(const Field& in, Field& out) {
|
||||
assert(0);
|
||||
}
|
||||
void Op(const Field& in, Field& out) {
|
||||
Mpc(in, out);
|
||||
}
|
||||
void AdjOp(const Field& in, Field& out) {
|
||||
MpcDag(in, out);
|
||||
}
|
||||
// Support for coarsening to a multigrid
|
||||
void OpDiag(const Field& in, Field& out) {
|
||||
assert(0); // must coarsen the unpreconditioned system
|
||||
}
|
||||
void OpDir(const Field& in, Field& out, int dir, int disp) {
|
||||
assert(0);
|
||||
}
|
||||
void OpDirAll(const Field& in, std::vector<Field>& out){
|
||||
assert(0);
|
||||
};
|
||||
};
|
||||
|
||||
template<class Matrix, class Field>
|
||||
class NonHermitianSchurDiagMooeeOperator : public NonHermitianSchurOperatorBase<Field>
|
||||
{
|
||||
public:
|
||||
Matrix& _Mat;
|
||||
NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){};
|
||||
virtual void Mpc(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
tmp.Checkerboard() = !in.Checkerboard();
|
||||
|
||||
_Mat.Meooe(in, tmp);
|
||||
_Mat.MooeeInv(tmp, out);
|
||||
_Mat.Meooe(out, tmp);
|
||||
|
||||
_Mat.Mooee(in, out);
|
||||
|
||||
axpy(out, -1.0, tmp, out);
|
||||
}
|
||||
virtual void MpcDag(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in, tmp);
|
||||
_Mat.MooeeInvDag(tmp, out);
|
||||
_Mat.MeooeDag(out, tmp);
|
||||
|
||||
_Mat.MooeeDag(in, out);
|
||||
|
||||
axpy(out, -1.0, tmp, out);
|
||||
}
|
||||
};
|
||||
|
||||
template<class Matrix,class Field>
|
||||
class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field>
|
||||
{
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
|
||||
public:
|
||||
NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){};
|
||||
virtual void Mpc(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.Meooe(in, out);
|
||||
_Mat.MooeeInv(out, tmp);
|
||||
_Mat.Meooe(tmp, out);
|
||||
_Mat.MooeeInv(out, tmp);
|
||||
|
||||
axpy(out, -1.0, tmp, in);
|
||||
}
|
||||
virtual void MpcDag(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInvDag(in, out);
|
||||
_Mat.MeooeDag(out, tmp);
|
||||
_Mat.MooeeInvDag(tmp, out);
|
||||
_Mat.MeooeDag(out, tmp);
|
||||
|
||||
axpy(out, -1.0, tmp, in);
|
||||
}
|
||||
};
|
||||
|
||||
template<class Matrix, class Field>
|
||||
class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field>
|
||||
{
|
||||
protected:
|
||||
Matrix& _Mat;
|
||||
|
||||
public:
|
||||
NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){};
|
||||
|
||||
virtual void Mpc(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MooeeInv(in, out);
|
||||
_Mat.Meooe(out, tmp);
|
||||
_Mat.MooeeInv(tmp, out);
|
||||
_Mat.Meooe(out, tmp);
|
||||
|
||||
axpy(out, -1.0, tmp, in);
|
||||
}
|
||||
virtual void MpcDag(const Field& in, Field& out) {
|
||||
Field tmp(in.Grid());
|
||||
|
||||
_Mat.MeooeDag(in, out);
|
||||
_Mat.MooeeInvDag(out, tmp);
|
||||
_Mat.MeooeDag(tmp, out);
|
||||
_Mat.MooeeInvDag(out, tmp);
|
||||
|
||||
axpy(out, -1.0, tmp, in);
|
||||
}
|
||||
};
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Left handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta --> ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta
|
||||
// Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta --> ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ;
|
||||
template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ;
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Staggered use
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class Matrix,class Field>
|
||||
class SchurStaggeredOperator : public SchurOperatorBase<Field> {
|
||||
protected:
|
||||
Matrix &_Mat;
|
||||
Field tmp;
|
||||
RealD mass;
|
||||
public:
|
||||
SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())
|
||||
{
|
||||
assert( _Mat.isTrivialEE() );
|
||||
mass = _Mat.Mass();
|
||||
}
|
||||
virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){
|
||||
Mpc(in,out);
|
||||
ComplexD dot= innerProduct(in,out);
|
||||
n1 = real(dot);
|
||||
n2 =0.0;
|
||||
}
|
||||
virtual void HermOp(const Field &in, Field &out){
|
||||
Mpc(in,out);
|
||||
// _Mat.Meooe(in,out);
|
||||
// _Mat.Meooe(out,tmp);
|
||||
// axpby(out,-1.0,mass*mass,tmp,in);
|
||||
}
|
||||
virtual void Mpc (const Field &in, Field &out)
|
||||
{
|
||||
Field tmp(in.Grid());
|
||||
Field tmp2(in.Grid());
|
||||
|
||||
// _Mat.Mooee(in,out);
|
||||
// _Mat.Mooee(out,tmp);
|
||||
|
||||
// std::cout << GridLogIterative << " HermOp.Mpc "<<std::endl;
|
||||
_Mat.Mooee(in,out);
|
||||
_Mat.Mooee(out,tmp);
|
||||
// std::cout << GridLogIterative << " HermOp.MooeeMooee "<<std::endl;
|
||||
|
||||
tMeo-=usecond();
|
||||
_Mat.Meooe(in,out);
|
||||
_Mat.Meooe(out,tmp);
|
||||
tMeo+=usecond();
|
||||
taxpby_norm-=usecond();
|
||||
RealD nn=axpby_norm(out,-1.0,mass*mass,tmp,in);
|
||||
taxpby_norm+=usecond();
|
||||
return nn;
|
||||
axpby(out,-1.0,mass*mass,tmp,in);
|
||||
}
|
||||
virtual RealD MpcDag (const Field &in, Field &out){
|
||||
return Mpc(in,out);
|
||||
virtual void MpcDag (const Field &in, Field &out){
|
||||
Mpc(in,out);
|
||||
}
|
||||
virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) {
|
||||
assert(0);// Never need with staggered
|
||||
@ -421,7 +513,6 @@ public:
|
||||
};
|
||||
template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>;
|
||||
|
||||
|
||||
/////////////////////////////////////////////////////////////
|
||||
// Base classes for functions of operators
|
||||
/////////////////////////////////////////////////////////////
|
||||
|
@ -38,16 +38,12 @@ template<class Field> class SparseMatrixBase {
|
||||
public:
|
||||
virtual GridBase *Grid(void) =0;
|
||||
// Full checkerboar operations
|
||||
virtual RealD M (const Field &in, Field &out)=0;
|
||||
virtual RealD Mdag (const Field &in, Field &out)=0;
|
||||
virtual void MdagM(const Field &in, Field &out,RealD &ni,RealD &no) {
|
||||
Field tmp (in.Grid());
|
||||
ni=M(in,tmp);
|
||||
no=Mdag(tmp,out);
|
||||
}
|
||||
virtual void M (const Field &in, Field &out)=0;
|
||||
virtual void Mdag (const Field &in, Field &out)=0;
|
||||
virtual void MdagM(const Field &in, Field &out) {
|
||||
RealD ni, no;
|
||||
MdagM(in,out,ni,no);
|
||||
Field tmp (in.Grid());
|
||||
M(in,tmp);
|
||||
Mdag(tmp,out);
|
||||
}
|
||||
virtual void Mdiag (const Field &in, Field &out)=0;
|
||||
virtual void Mdir (const Field &in, Field &out,int dir, int disp)=0;
|
||||
|
@ -234,10 +234,8 @@ public:
|
||||
|
||||
GridBase *grid=in.Grid();
|
||||
|
||||
// std::cout << "Chevyshef(): in.Grid()="<<in.Grid()<<std::endl;
|
||||
//std::cout <<" Linop.Grid()="<<Linop.Grid()<<"Linop.RedBlackGrid()="<<Linop.RedBlackGrid()<<std::endl;
|
||||
|
||||
int vol=grid->gSites();
|
||||
typedef typename Field::vector_type vector_type;
|
||||
|
||||
Field T0(grid); T0 = in;
|
||||
Field T1(grid);
|
||||
@ -258,14 +256,28 @@ public:
|
||||
// out = ()*T0 + Coeffs[1]*T1;
|
||||
axpby(out,0.5*Coeffs[0],Coeffs[1],T0,T1);
|
||||
for(int n=2;n<order;n++){
|
||||
|
||||
|
||||
Linop.HermOp(*Tn,y);
|
||||
// y=xscale*y+mscale*(*Tn);
|
||||
// *Tnp=2.0*y-(*Tnm);
|
||||
// out=out+Coeffs[n]* (*Tnp);
|
||||
#if 0
|
||||
auto y_v = y.View();
|
||||
auto Tn_v = Tn->View();
|
||||
auto Tnp_v = Tnp->View();
|
||||
auto Tnm_v = Tnm->View();
|
||||
constexpr int Nsimd = vector_type::Nsimd();
|
||||
accelerator_forNB(ss, in.Grid()->oSites(), Nsimd, {
|
||||
coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss));
|
||||
coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss));
|
||||
});
|
||||
if ( Coeffs[n] != 0.0) {
|
||||
axpy(out,Coeffs[n],*Tnp,out);
|
||||
}
|
||||
#else
|
||||
axpby(y,xscale,mscale,y,(*Tn));
|
||||
axpby(*Tnp,2.0,-1.0,y,(*Tnm));
|
||||
axpy(out,Coeffs[n],*Tnp,out);
|
||||
if ( Coeffs[n] != 0.0) {
|
||||
axpy(out,Coeffs[n],*Tnp,out);
|
||||
}
|
||||
#endif
|
||||
// Cycle pointers to avoid copies
|
||||
Field *swizzle = Tnm;
|
||||
Tnm =Tn;
|
||||
|
473
Grid/algorithms/approx/RemezGeneral.cc
Normal file
473
Grid/algorithms/approx/RemezGeneral.cc
Normal file
@ -0,0 +1,473 @@
|
||||
#include<math.h>
|
||||
#include<stdio.h>
|
||||
#include<stdlib.h>
|
||||
#include<string>
|
||||
#include<iostream>
|
||||
#include<iomanip>
|
||||
#include<cassert>
|
||||
|
||||
#include<Grid/algorithms/approx/RemezGeneral.h>
|
||||
|
||||
|
||||
// Constructor
|
||||
AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision,
|
||||
bigfloat (*f)(bigfloat x, void *data), void *data): f(f),
|
||||
data(data),
|
||||
prec(precision),
|
||||
apstrt(lower), apend(upper), apwidt(upper - lower),
|
||||
n(0), d(0), pow_n(0), pow_d(0)
|
||||
{
|
||||
bigfloat::setDefaultPrecision(prec);
|
||||
|
||||
std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n";
|
||||
std::cout<<"Precision of arithmetic is "<<precision<<std::endl;
|
||||
}
|
||||
|
||||
//Determine the properties of the numerator and denominator polynomials
|
||||
void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){
|
||||
pow_n = num_degree;
|
||||
pow_d = den_degree;
|
||||
|
||||
if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0);
|
||||
if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0);
|
||||
|
||||
if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0);
|
||||
if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0);
|
||||
|
||||
num_type = num_type_in;
|
||||
den_type = den_type_in;
|
||||
|
||||
num_pows.resize(pow_n+1);
|
||||
den_pows.resize(pow_d+1);
|
||||
|
||||
int n_in = 0;
|
||||
bool odd = num_type == PolyType::Full || num_type == PolyType::Odd;
|
||||
bool even = num_type == PolyType::Full || num_type == PolyType::Even;
|
||||
for(int i=0;i<=pow_n;i++){
|
||||
num_pows[i] = -1;
|
||||
if(i % 2 == 0 && even) num_pows[i] = n_in++;
|
||||
if(i % 2 == 1 && odd) num_pows[i] = n_in++;
|
||||
}
|
||||
|
||||
std::cout << n_in << " terms in numerator" << std::endl;
|
||||
--n_in; //power is 1 less than the number of terms, eg pow=1 a x^1 + b x^0
|
||||
|
||||
int d_in = 0;
|
||||
odd = den_type == PolyType::Full || den_type == PolyType::Odd;
|
||||
even = den_type == PolyType::Full || den_type == PolyType::Even;
|
||||
for(int i=0;i<=pow_d;i++){
|
||||
den_pows[i] = -1;
|
||||
if(i % 2 == 0 && even) den_pows[i] = d_in++;
|
||||
if(i % 2 == 1 && odd) den_pows[i] = d_in++;
|
||||
}
|
||||
|
||||
std::cout << d_in << " terms in denominator" << std::endl;
|
||||
--d_in;
|
||||
|
||||
n = n_in;
|
||||
d = d_in;
|
||||
}
|
||||
|
||||
//Setup algorithm
|
||||
void AlgRemezGeneral::reinitializeAlgorithm(){
|
||||
spread = 1.0e37;
|
||||
iter = 0;
|
||||
|
||||
neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1
|
||||
|
||||
param.resize(neq);
|
||||
yy.resize(neq+1);
|
||||
|
||||
//Initialize linear equation temporaries
|
||||
A.resize(neq*neq);
|
||||
B.resize(neq);
|
||||
IPS.resize(neq);
|
||||
|
||||
//Initialize maximum and minimum errors
|
||||
xx.resize(neq+2);
|
||||
mm.resize(neq+1);
|
||||
initialGuess();
|
||||
|
||||
//Initialize search steps
|
||||
step.resize(neq+1);
|
||||
stpini();
|
||||
}
|
||||
|
||||
double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree,
|
||||
const PolyType num_type_in, const PolyType den_type_in,
|
||||
const double _tolerance, const int report_freq){
|
||||
//Setup the properties of the polynomial
|
||||
setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in);
|
||||
|
||||
//Setup the algorithm
|
||||
reinitializeAlgorithm();
|
||||
|
||||
bigfloat tolerance = _tolerance;
|
||||
|
||||
//Iterate until convergance
|
||||
while (spread > tolerance) {
|
||||
if (iter++ % report_freq==0)
|
||||
std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl;
|
||||
|
||||
equations();
|
||||
if (delta < tolerance) {
|
||||
std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n";
|
||||
assert(0);
|
||||
};
|
||||
assert( delta>= tolerance );
|
||||
|
||||
search();
|
||||
}
|
||||
|
||||
int sign;
|
||||
double error = (double)getErr(mm[0],&sign);
|
||||
std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl;
|
||||
|
||||
// Return the maximum error in the approximation
|
||||
return error;
|
||||
}
|
||||
|
||||
|
||||
// Initial values of maximal and minimal errors
|
||||
void AlgRemezGeneral::initialGuess(){
|
||||
// Supply initial guesses for solution points
|
||||
long ncheb = neq; // Degree of Chebyshev error estimate
|
||||
|
||||
// Find ncheb+1 extrema of Chebyshev polynomial
|
||||
bigfloat a = ncheb;
|
||||
bigfloat r;
|
||||
|
||||
mm[0] = apstrt;
|
||||
for (long i = 1; i < ncheb; i++) {
|
||||
r = 0.5 * (1 - cos((M_PI * i)/(double) a));
|
||||
//r *= sqrt_bf(r);
|
||||
r = (exp((double)r)-1.0)/(exp(1.0)-1.0);
|
||||
mm[i] = apstrt + r * apwidt;
|
||||
}
|
||||
mm[ncheb] = apend;
|
||||
|
||||
a = 2.0 * ncheb;
|
||||
for (long i = 0; i <= ncheb; i++) {
|
||||
r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a));
|
||||
//r *= sqrt_bf(r); // Squeeze to low end of interval
|
||||
r = (exp((double)r)-1.0)/(exp(1.0)-1.0);
|
||||
xx[i] = apstrt + r * apwidt;
|
||||
}
|
||||
}
|
||||
|
||||
// Initialise step sizes
|
||||
void AlgRemezGeneral::stpini(){
|
||||
xx[neq+1] = apend;
|
||||
delta = 0.25;
|
||||
step[0] = xx[0] - apstrt;
|
||||
for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1];
|
||||
step[neq] = step[neq-1];
|
||||
}
|
||||
|
||||
// Search for error maxima and minima
|
||||
void AlgRemezGeneral::search(){
|
||||
bigfloat a, q, xm, ym, xn, yn, xx1;
|
||||
int emsign, ensign, steps;
|
||||
|
||||
int meq = neq + 1;
|
||||
|
||||
bigfloat eclose = 1.0e30;
|
||||
bigfloat farther = 0l;
|
||||
|
||||
bigfloat xx0 = apstrt;
|
||||
|
||||
for (int i = 0; i < meq; i++) {
|
||||
steps = 0;
|
||||
xx1 = xx[i]; // Next zero
|
||||
if (i == meq-1) xx1 = apend;
|
||||
xm = mm[i];
|
||||
ym = getErr(xm,&emsign);
|
||||
q = step[i];
|
||||
xn = xm + q;
|
||||
if (xn < xx0 || xn >= xx1) { // Cannot skip over adjacent boundaries
|
||||
q = -q;
|
||||
xn = xm;
|
||||
yn = ym;
|
||||
ensign = emsign;
|
||||
} else {
|
||||
yn = getErr(xn,&ensign);
|
||||
if (yn < ym) {
|
||||
q = -q;
|
||||
xn = xm;
|
||||
yn = ym;
|
||||
ensign = emsign;
|
||||
}
|
||||
}
|
||||
|
||||
while(yn >= ym) { // March until error becomes smaller.
|
||||
if (++steps > 10)
|
||||
break;
|
||||
|
||||
ym = yn;
|
||||
xm = xn;
|
||||
emsign = ensign;
|
||||
a = xm + q;
|
||||
if (a == xm || a <= xx0 || a >= xx1)
|
||||
break;// Must not skip over the zeros either side.
|
||||
|
||||
xn = a;
|
||||
yn = getErr(xn,&ensign);
|
||||
}
|
||||
|
||||
mm[i] = xm; // Position of maximum
|
||||
yy[i] = ym; // Value of maximum
|
||||
|
||||
if (eclose > ym) eclose = ym;
|
||||
if (farther < ym) farther = ym;
|
||||
|
||||
xx0 = xx1; // Walk to next zero.
|
||||
} // end of search loop
|
||||
|
||||
q = (farther - eclose); // Decrease step size if error spread increased
|
||||
|
||||
if (eclose != 0.0) q /= eclose; // Relative error spread
|
||||
|
||||
if (q >= spread)
|
||||
delta *= 0.5; // Spread is increasing; decrease step size
|
||||
|
||||
spread = q;
|
||||
|
||||
for (int i = 0; i < neq; i++) {
|
||||
q = yy[i+1];
|
||||
if (q != 0.0) q = yy[i] / q - (bigfloat)1l;
|
||||
else q = 0.0625;
|
||||
if (q > (bigfloat)0.25) q = 0.25;
|
||||
q *= mm[i+1] - mm[i];
|
||||
step[i] = q * delta;
|
||||
}
|
||||
step[neq] = step[neq-1];
|
||||
|
||||
for (int i = 0; i < neq; i++) { // Insert new locations for the zeros.
|
||||
xm = xx[i] - step[i];
|
||||
|
||||
if (xm <= apstrt)
|
||||
continue;
|
||||
|
||||
if (xm >= apend)
|
||||
continue;
|
||||
|
||||
if (xm <= mm[i])
|
||||
xm = (bigfloat)0.5 * (mm[i] + xx[i]);
|
||||
|
||||
if (xm >= mm[i+1])
|
||||
xm = (bigfloat)0.5 * (mm[i+1] + xx[i]);
|
||||
|
||||
xx[i] = xm;
|
||||
}
|
||||
}
|
||||
|
||||
// Solve the equations
|
||||
void AlgRemezGeneral::equations(){
|
||||
bigfloat x, y, z;
|
||||
bigfloat *aa;
|
||||
|
||||
for (int i = 0; i < neq; i++) { // set up the equations for solution by simq()
|
||||
int ip = neq * i; // offset to 1st element of this row of matrix
|
||||
x = xx[i]; // the guess for this row
|
||||
y = func(x); // right-hand-side vector
|
||||
|
||||
z = (bigfloat)1l;
|
||||
aa = A.data()+ip;
|
||||
int t = 0;
|
||||
for (int j = 0; j <= pow_n; j++) {
|
||||
if(num_pows[j] != -1){ *aa++ = z; t++; }
|
||||
z *= x;
|
||||
}
|
||||
assert(t == n+1);
|
||||
|
||||
z = (bigfloat)1l;
|
||||
t = 0;
|
||||
for (int j = 0; j < pow_d; j++) {
|
||||
if(den_pows[j] != -1){ *aa++ = -y * z; t++; }
|
||||
z *= x;
|
||||
}
|
||||
assert(t == d);
|
||||
|
||||
B[i] = y * z; // Right hand side vector
|
||||
}
|
||||
|
||||
// Solve the simultaneous linear equations.
|
||||
if (simq()){
|
||||
std::cout<<"simq failed\n";
|
||||
exit(0);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
// Evaluate the rational form P(x)/Q(x) using coefficients
|
||||
// from the solution vector param
|
||||
bigfloat AlgRemezGeneral::approx(const bigfloat x) const{
|
||||
// Work backwards toward the constant term.
|
||||
int c = n;
|
||||
bigfloat yn = param[c--]; // Highest order numerator coefficient
|
||||
for (int i = pow_n-1; i >= 0; i--) yn = x * yn + (num_pows[i] != -1 ? param[c--] : bigfloat(0l));
|
||||
|
||||
c = n+d;
|
||||
bigfloat yd = 1l; //Highest degree coefficient is 1.0
|
||||
for (int i = pow_d-1; i >= 0; i--) yd = x * yd + (den_pows[i] != -1 ? param[c--] : bigfloat(0l));
|
||||
|
||||
return(yn/yd);
|
||||
}
|
||||
|
||||
// Compute size and sign of the approximation error at x
|
||||
bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{
|
||||
bigfloat f = func(x);
|
||||
bigfloat e = approx(x) - f;
|
||||
if (f != 0) e /= f;
|
||||
if (e < (bigfloat)0.0) {
|
||||
*sign = -1;
|
||||
e = -e;
|
||||
}
|
||||
else *sign = 1;
|
||||
|
||||
return(e);
|
||||
}
|
||||
|
||||
// Solve the system AX=B
|
||||
int AlgRemezGeneral::simq(){
|
||||
|
||||
int ip, ipj, ipk, ipn;
|
||||
int idxpiv;
|
||||
int kp, kp1, kpk, kpn;
|
||||
int nip, nkp;
|
||||
bigfloat em, q, rownrm, big, size, pivot, sum;
|
||||
bigfloat *aa;
|
||||
bigfloat *X = param.data();
|
||||
|
||||
int n = neq;
|
||||
int nm1 = n - 1;
|
||||
// Initialize IPS and X
|
||||
|
||||
int ij = 0;
|
||||
for (int i = 0; i < n; i++) {
|
||||
IPS[i] = i;
|
||||
rownrm = 0.0;
|
||||
for(int j = 0; j < n; j++) {
|
||||
q = abs_bf(A[ij]);
|
||||
if(rownrm < q) rownrm = q;
|
||||
++ij;
|
||||
}
|
||||
if (rownrm == (bigfloat)0l) {
|
||||
std::cout<<"simq rownrm=0\n";
|
||||
return(1);
|
||||
}
|
||||
X[i] = (bigfloat)1.0 / rownrm;
|
||||
}
|
||||
|
||||
for (int k = 0; k < nm1; k++) {
|
||||
big = 0.0;
|
||||
idxpiv = 0;
|
||||
|
||||
for (int i = k; i < n; i++) {
|
||||
ip = IPS[i];
|
||||
ipk = n*ip + k;
|
||||
size = abs_bf(A[ipk]) * X[ip];
|
||||
if (size > big) {
|
||||
big = size;
|
||||
idxpiv = i;
|
||||
}
|
||||
}
|
||||
|
||||
if (big == (bigfloat)0l) {
|
||||
std::cout<<"simq big=0\n";
|
||||
return(2);
|
||||
}
|
||||
if (idxpiv != k) {
|
||||
int j = IPS[k];
|
||||
IPS[k] = IPS[idxpiv];
|
||||
IPS[idxpiv] = j;
|
||||
}
|
||||
kp = IPS[k];
|
||||
kpk = n*kp + k;
|
||||
pivot = A[kpk];
|
||||
kp1 = k+1;
|
||||
for (int i = kp1; i < n; i++) {
|
||||
ip = IPS[i];
|
||||
ipk = n*ip + k;
|
||||
em = -A[ipk] / pivot;
|
||||
A[ipk] = -em;
|
||||
nip = n*ip;
|
||||
nkp = n*kp;
|
||||
aa = A.data()+nkp+kp1;
|
||||
for (int j = kp1; j < n; j++) {
|
||||
ipj = nip + j;
|
||||
A[ipj] = A[ipj] + em * *aa++;
|
||||
}
|
||||
}
|
||||
}
|
||||
kpn = n * IPS[n-1] + n - 1; // last element of IPS[n] th row
|
||||
if (A[kpn] == (bigfloat)0l) {
|
||||
std::cout<<"simq A[kpn]=0\n";
|
||||
return(3);
|
||||
}
|
||||
|
||||
|
||||
ip = IPS[0];
|
||||
X[0] = B[ip];
|
||||
for (int i = 1; i < n; i++) {
|
||||
ip = IPS[i];
|
||||
ipj = n * ip;
|
||||
sum = 0.0;
|
||||
for (int j = 0; j < i; j++) {
|
||||
sum += A[ipj] * X[j];
|
||||
++ipj;
|
||||
}
|
||||
X[i] = B[ip] - sum;
|
||||
}
|
||||
|
||||
ipn = n * IPS[n-1] + n - 1;
|
||||
X[n-1] = X[n-1] / A[ipn];
|
||||
|
||||
for (int iback = 1; iback < n; iback++) {
|
||||
//i goes (n-1),...,1
|
||||
int i = nm1 - iback;
|
||||
ip = IPS[i];
|
||||
nip = n*ip;
|
||||
sum = 0.0;
|
||||
aa = A.data()+nip+i+1;
|
||||
for (int j= i + 1; j < n; j++)
|
||||
sum += *aa++ * X[j];
|
||||
X[i] = (X[i] - sum) / A[nip+i];
|
||||
}
|
||||
|
||||
return(0);
|
||||
}
|
||||
|
||||
void AlgRemezGeneral::csv(std::ostream & os) const{
|
||||
os << "Numerator" << std::endl;
|
||||
for(int i=0;i<=pow_n;i++){
|
||||
os << getCoeffNum(i) << "*x^" << i;
|
||||
if(i!=pow_n) os << " + ";
|
||||
}
|
||||
os << std::endl;
|
||||
|
||||
os << "Denominator" << std::endl;
|
||||
for(int i=0;i<=pow_d;i++){
|
||||
os << getCoeffDen(i) << "*x^" << i;
|
||||
if(i!=pow_d) os << " + ";
|
||||
}
|
||||
os << std::endl;
|
||||
|
||||
//For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc
|
||||
int sign;
|
||||
os << "Errors at maxima: coordinate, error, (sign)" << std::endl;
|
||||
for(int i=0;i<neq+1;i++){
|
||||
os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl;
|
||||
}
|
||||
|
||||
os << "Scan over range:" << std::endl;
|
||||
int npt = 60;
|
||||
bigfloat dlt = (apend - apstrt)/bigfloat(npt-1);
|
||||
|
||||
for (bigfloat x=apstrt; x<=apend; x = x + dlt) {
|
||||
double f = evaluateFunc(x);
|
||||
double r = evaluateApprox(x);
|
||||
os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl;
|
||||
}
|
||||
return;
|
||||
}
|
170
Grid/algorithms/approx/RemezGeneral.h
Normal file
170
Grid/algorithms/approx/RemezGeneral.h
Normal file
@ -0,0 +1,170 @@
|
||||
/*
|
||||
C.Kelly Jan 2020 based on implementation by M. Clark May 2005
|
||||
|
||||
AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial
|
||||
It includes optional restriction to odd/even polynomials for the numerator and/or denominator
|
||||
*/
|
||||
|
||||
#ifndef INCLUDED_ALG_REMEZ_GENERAL_H
|
||||
#define INCLUDED_ALG_REMEZ_GENERAL_H
|
||||
|
||||
#include <stddef.h>
|
||||
#include <Grid/GridStd.h>
|
||||
|
||||
#ifdef HAVE_LIBGMP
|
||||
#include "bigfloat.h"
|
||||
#else
|
||||
#include "bigfloat_double.h"
|
||||
#endif
|
||||
|
||||
|
||||
class AlgRemezGeneral{
|
||||
public:
|
||||
enum PolyType { Even, Odd, Full };
|
||||
|
||||
private:
|
||||
|
||||
// In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer
|
||||
bigfloat (*f)(bigfloat x, void *data);
|
||||
void *data;
|
||||
|
||||
// The approximation parameters
|
||||
std::vector<bigfloat> param;
|
||||
bigfloat norm;
|
||||
|
||||
// The number of non-zero terms in the numerator and denominator
|
||||
int n, d;
|
||||
// The numerator and denominator degree (i.e. the largest power)
|
||||
int pow_n, pow_d;
|
||||
|
||||
// Specify if the numerator and/or denominator are odd/even polynomials
|
||||
PolyType num_type;
|
||||
PolyType den_type;
|
||||
std::vector<int> num_pows; //contains the mapping, with -1 if not present
|
||||
std::vector<int> den_pows;
|
||||
|
||||
// The bounds of the approximation
|
||||
bigfloat apstrt, apwidt, apend;
|
||||
|
||||
// Variables used to calculate the approximation
|
||||
int nd1, iter;
|
||||
std::vector<bigfloat> xx;
|
||||
std::vector<bigfloat> mm;
|
||||
std::vector<bigfloat> step;
|
||||
|
||||
bigfloat delta, spread;
|
||||
|
||||
// Variables used in search
|
||||
std::vector<bigfloat> yy;
|
||||
|
||||
// Variables used in solving linear equations
|
||||
std::vector<bigfloat> A;
|
||||
std::vector<bigfloat> B;
|
||||
std::vector<int> IPS;
|
||||
|
||||
// The number of equations we must solve at each iteration (n+d+1)
|
||||
int neq;
|
||||
|
||||
// The precision of the GNU MP library
|
||||
long prec;
|
||||
|
||||
// Initialize member variables associated with the polynomial's properties
|
||||
void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in);
|
||||
|
||||
// Initial values of maximal and minmal errors
|
||||
void initialGuess();
|
||||
|
||||
// Initialise step sizes
|
||||
void stpini();
|
||||
|
||||
// Initialize the algorithm
|
||||
void reinitializeAlgorithm();
|
||||
|
||||
// Solve the equations
|
||||
void equations();
|
||||
|
||||
// Search for error maxima and minima
|
||||
void search();
|
||||
|
||||
// Calculate function required for the approximation
|
||||
inline bigfloat func(bigfloat x) const{
|
||||
return f(x, data);
|
||||
}
|
||||
|
||||
// Compute size and sign of the approximation error at x
|
||||
bigfloat getErr(bigfloat x, int *sign) const;
|
||||
|
||||
// Solve the system AX=B where X = param
|
||||
int simq();
|
||||
|
||||
// Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param
|
||||
bigfloat approx(bigfloat x) const;
|
||||
|
||||
public:
|
||||
|
||||
AlgRemezGeneral(double lower, double upper, long prec,
|
||||
bigfloat (*f)(bigfloat x, void *data), void *data);
|
||||
|
||||
inline int getDegree(void) const{
|
||||
assert(n==d);
|
||||
return n;
|
||||
}
|
||||
// Reset the bounds of the approximation
|
||||
inline void setBounds(double lower, double upper) {
|
||||
apstrt = lower;
|
||||
apend = upper;
|
||||
apwidt = apend - apstrt;
|
||||
}
|
||||
|
||||
// Get the bounds of the approximation
|
||||
inline void getBounds(double &lower, double &upper) const{
|
||||
lower=(double)apstrt;
|
||||
upper=(double)apend;
|
||||
}
|
||||
|
||||
// Run the algorithm to generate the rational approximation
|
||||
double generateApprox(int num_degree, int den_degree,
|
||||
PolyType num_type, PolyType den_type,
|
||||
const double tolerance = 1e-15, const int report_freq = 1000);
|
||||
|
||||
inline double generateApprox(int num_degree, int den_degree,
|
||||
const double tolerance = 1e-15, const int report_freq = 1000){
|
||||
return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq);
|
||||
}
|
||||
|
||||
// Evaluate the rational form P(x)/Q(x) using coefficients from the
|
||||
// solution vector param
|
||||
inline double evaluateApprox(double x) const{
|
||||
return (double)approx((bigfloat)x);
|
||||
}
|
||||
|
||||
// Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param
|
||||
inline double evaluateInverseApprox(double x) const{
|
||||
return 1.0/(double)approx((bigfloat)x);
|
||||
}
|
||||
|
||||
// Calculate function required for the approximation
|
||||
inline double evaluateFunc(double x) const{
|
||||
return (double)func((bigfloat)x);
|
||||
}
|
||||
|
||||
// Calculate inverse function required for the approximation
|
||||
inline double evaluateInverseFunc(double x) const{
|
||||
return 1.0/(double)func((bigfloat)x);
|
||||
}
|
||||
|
||||
// Dump csv of function, approx and error
|
||||
void csv(std::ostream &os = std::cout) const;
|
||||
|
||||
// Get the coefficient of the term x^i in the numerator
|
||||
inline double getCoeffNum(const int i) const{
|
||||
return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]);
|
||||
}
|
||||
// Get the coefficient of the term x^i in the denominator
|
||||
inline double getCoeffDen(const int i) const{
|
||||
if(i == pow_d) return 1.0;
|
||||
else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]);
|
||||
}
|
||||
};
|
||||
|
||||
#endif
|
183
Grid/algorithms/approx/ZMobius.cc
Normal file
183
Grid/algorithms/approx/ZMobius.cc
Normal file
@ -0,0 +1,183 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/algorithms/approx/ZMobius.cc
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#include <Grid/algorithms/approx/ZMobius.h>
|
||||
#include <Grid/algorithms/approx/RemezGeneral.h>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
NAMESPACE_BEGIN(Approx);
|
||||
|
||||
//Compute the tanh approximation
|
||||
inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){
|
||||
int Ls = w.size();
|
||||
|
||||
ComplexD fxp = 1., fmp = 1.;
|
||||
for(int i=0;i<Ls;i++){
|
||||
fxp = fxp * ( w[i] + x );
|
||||
fmp = fmp * ( w[i] - x );
|
||||
}
|
||||
return ((fxp - fmp)/(fxp + fmp)).real();
|
||||
}
|
||||
inline double epsilonMobius(const double x, const std::vector<RealD> &w){
|
||||
int Ls = w.size();
|
||||
|
||||
double fxp = 1., fmp = 1.;
|
||||
for(int i=0;i<Ls;i++){
|
||||
fxp = fxp * ( w[i] + x );
|
||||
fmp = fmp * ( w[i] - x );
|
||||
}
|
||||
return (fxp - fmp)/(fxp + fmp);
|
||||
}
|
||||
|
||||
|
||||
|
||||
//Compute the tanh approximation in a form suitable for the Remez
|
||||
bigfloat epsilonMobius(bigfloat x, void* data){
|
||||
const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data );
|
||||
bigfloat fxp(1.0);
|
||||
bigfloat fmp(1.0);
|
||||
|
||||
for(int i=0;i<omega.size();i++){
|
||||
fxp = fxp * ( bigfloat(omega[i]) + x);
|
||||
fmp = fmp * ( bigfloat(omega[i]) - x);
|
||||
}
|
||||
return (fxp - fmp)/(fxp + fmp);
|
||||
}
|
||||
|
||||
//Compute the Zmobius Omega parameters suitable for eigenvalue range -lambda_bound <= lambda <= lambda_bound
|
||||
//Note omega_i = 1/(b_i + c_i) where b_i and c_i are the Mobius parameters
|
||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out,
|
||||
const std::vector<RealD> &omega_in, const int Ls_in,
|
||||
const RealD lambda_bound){
|
||||
assert(omega_in.size() == Ls_in);
|
||||
omega_out.resize(Ls_out);
|
||||
|
||||
//Use the Remez algorithm to generate the appropriate rational polynomial
|
||||
//For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)
|
||||
AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in);
|
||||
remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100);
|
||||
remez.csv(std::cout);
|
||||
|
||||
//The rational approximation has the form [ f(x) - f(-x) ] / [ f(x) + f(-x) ] where f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x )
|
||||
//cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7 pg 102
|
||||
//omega_i are therefore the negative of the complex roots of f(x)
|
||||
|
||||
//We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial
|
||||
// \rho(\lambda) = det( A - \lambda I ) where I is the unit matrix
|
||||
//The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n is the companion matrix
|
||||
// A = | 0 1 0 0 0 .... 0 |
|
||||
// | 0 0 1 0 0 .... 0 |
|
||||
// | : : : : : : |
|
||||
// | 0 0 0 0 0 1
|
||||
// | -a0 -a1 -a2 ... ... -an|
|
||||
|
||||
|
||||
//Note the Remez defines the largest power to have unit coefficient
|
||||
std::vector<RealD> coeffs(Ls_out+1);
|
||||
for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers
|
||||
for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers
|
||||
|
||||
std::vector<std::complex<RealD> > roots(Ls_out);
|
||||
|
||||
//Form the companion matrix
|
||||
Eigen::MatrixXd compn(Ls_out,Ls_out);
|
||||
for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.;
|
||||
compn(Ls_out - 1, 0) = -coeffs[0];
|
||||
|
||||
for(int j=1;j<Ls_out;j++){
|
||||
for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.;
|
||||
compn(Ls_out - 1, j) = -coeffs[j];
|
||||
}
|
||||
|
||||
//Eigensolve
|
||||
Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false);
|
||||
|
||||
const auto & ev = slv.eigenvalues();
|
||||
for(int i=0;i<Ls_out;i++)
|
||||
omega_out[i] = -ev(i);
|
||||
|
||||
//Sort ascending (smallest at start of vector!)
|
||||
std::sort(omega_out.begin(), omega_out.end(),
|
||||
[&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); });
|
||||
|
||||
//McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension
|
||||
std::vector<ComplexD> omega_tmp = omega_out;
|
||||
int s_low=0, s_high=Ls_out-1, ss=0;
|
||||
for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega
|
||||
int s_to;
|
||||
if(ss % 2 == 0){
|
||||
s_to = s_low++;
|
||||
}else{
|
||||
s_to = s_high--;
|
||||
}
|
||||
omega_out[s_to] = omega_tmp[s_from];
|
||||
++ss;
|
||||
}
|
||||
|
||||
std::cout << "Resulting omega_i:" << std::endl;
|
||||
for(int i=0;i<Ls_out;i++)
|
||||
std::cout << omega_out[i] << std::endl;
|
||||
|
||||
std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl;
|
||||
std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n";
|
||||
|
||||
int npt = 60;
|
||||
double dlt = lambda_bound/double(npt-1);
|
||||
|
||||
for (int i =0; i<npt; i++){
|
||||
double x = i*dlt;
|
||||
double r = remez.evaluateApprox(x);
|
||||
double p = epsilonMobius(x, omega_out);
|
||||
double e = epsilonMobius(x, omega_in);
|
||||
|
||||
std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl;
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
//mobius_param = b+c with b-c=1
|
||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){
|
||||
std::vector<RealD> omega_in(Ls_in, 1./mobius_param);
|
||||
computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound);
|
||||
}
|
||||
|
||||
//ZMobius class takes gamma_i = (b+c) omega_i as its input, where b, c are factored out
|
||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,
|
||||
const RealD mobius_param_out, const int Ls_out,
|
||||
const RealD mobius_param_in, const int Ls_in,
|
||||
const RealD lambda_bound){
|
||||
computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound);
|
||||
for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out;
|
||||
}
|
||||
//Assumes mobius_param_out == mobius_param_in
|
||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){
|
||||
computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound);
|
||||
}
|
||||
|
||||
NAMESPACE_END(Approx);
|
||||
NAMESPACE_END(Grid);
|
57
Grid/algorithms/approx/ZMobius.h
Normal file
57
Grid/algorithms/approx/ZMobius.h
Normal file
@ -0,0 +1,57 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/algorithms/approx/ZMobius.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#ifndef GRID_ZMOBIUS_APPROX_H
|
||||
#define GRID_ZMOBIUS_APPROX_H
|
||||
|
||||
#include <Grid/GridCore.h>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
NAMESPACE_BEGIN(Approx);
|
||||
|
||||
//Compute the Zmobius Omega parameters suitable for eigenvalue range -lambda_bound <= lambda <= lambda_bound
|
||||
//Note omega_i = 1/(b_i + c_i) where b_i and c_i are the Mobius parameters
|
||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out,
|
||||
const std::vector<RealD> &omega_in, const int Ls_in,
|
||||
const RealD lambda_bound);
|
||||
|
||||
//mobius_param = b+c with b-c=1
|
||||
void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound);
|
||||
|
||||
//ZMobius class takes gamma_i = (b+c) omega_i as its input, where b, c are factored out
|
||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,
|
||||
const RealD mobius_param_out, const int Ls_out,
|
||||
const RealD mobius_param_in, const int Ls_in,
|
||||
const RealD lambda_bound);
|
||||
|
||||
//Assumes mobius_param_out == mobius_param_in
|
||||
void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound);
|
||||
|
||||
NAMESPACE_END(Approx);
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#ifndef INCLUDED_BIGFLOAT_DOUBLE_H
|
||||
#define INCLUDED_BIGFLOAT_DOUBLE_H
|
||||
|
||||
#include <math.h>
|
||||
|
||||
typedef double mfloat;
|
||||
@ -186,4 +190,6 @@ public:
|
||||
// friend bigfloat& random(void);
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
|
234
Grid/algorithms/iterative/BiCGSTAB.h
Normal file
234
Grid/algorithms/iterative/BiCGSTAB.h
Normal file
@ -0,0 +1,234 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/algorithms/iterative/BiCGSTAB.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
Author: juettner <juettner@soton.ac.uk>
|
||||
Author: David Murphy <djmurphy@mit.edu>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#ifndef GRID_BICGSTAB_H
|
||||
#define GRID_BICGSTAB_H
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
/////////////////////////////////////////////////////////////
|
||||
// Base classes for iterative processes based on operators
|
||||
// single input vec, single output vec.
|
||||
/////////////////////////////////////////////////////////////
|
||||
|
||||
template <class Field>
|
||||
class BiCGSTAB : public OperatorFunction<Field>
|
||||
{
|
||||
public:
|
||||
using OperatorFunction<Field>::operator();
|
||||
|
||||
bool ErrorOnNoConverge; // throw an assert when the CG fails to converge.
|
||||
// Defaults true.
|
||||
RealD Tolerance;
|
||||
Integer MaxIterations;
|
||||
Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
|
||||
|
||||
BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) :
|
||||
Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){};
|
||||
|
||||
void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi)
|
||||
{
|
||||
psi.Checkerboard() = src.Checkerboard();
|
||||
conformable(psi, src);
|
||||
|
||||
RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1);
|
||||
RealD a(0), bo(0), b(0), ssq(0);
|
||||
|
||||
Field p(src);
|
||||
Field r(src);
|
||||
Field rhat(src);
|
||||
Field v(src);
|
||||
Field s(src);
|
||||
Field t(src);
|
||||
Field h(src);
|
||||
|
||||
v = Zero();
|
||||
p = Zero();
|
||||
|
||||
// Initial residual computation & set up
|
||||
RealD guess = norm2(psi);
|
||||
assert(std::isnan(guess) == 0);
|
||||
|
||||
Linop.Op(psi, v);
|
||||
b = norm2(v);
|
||||
|
||||
r = src - v;
|
||||
rhat = r;
|
||||
a = norm2(r);
|
||||
ssq = norm2(src);
|
||||
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl;
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: src " << ssq << std::endl;
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: mp " << b << std::endl;
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: r " << a << std::endl;
|
||||
|
||||
RealD rsq = Tolerance * Tolerance * ssq;
|
||||
|
||||
// Check if guess is really REALLY good :)
|
||||
if(a <= rsq){ return; }
|
||||
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl;
|
||||
|
||||
GridStopWatch LinalgTimer;
|
||||
GridStopWatch InnerTimer;
|
||||
GridStopWatch AxpyNormTimer;
|
||||
GridStopWatch LinearCombTimer;
|
||||
GridStopWatch MatrixTimer;
|
||||
GridStopWatch SolverTimer;
|
||||
|
||||
SolverTimer.Start();
|
||||
int k;
|
||||
for (k = 1; k <= MaxIterations; k++)
|
||||
{
|
||||
rho_prev = rho;
|
||||
|
||||
LinalgTimer.Start();
|
||||
InnerTimer.Start();
|
||||
ComplexD Crho = innerProduct(rhat,r);
|
||||
InnerTimer.Stop();
|
||||
rho = Crho.real();
|
||||
|
||||
beta = (rho / rho_prev) * (alpha / omega);
|
||||
|
||||
LinearCombTimer.Start();
|
||||
bo = beta * omega;
|
||||
{
|
||||
autoView( p_v , p, AcceleratorWrite);
|
||||
autoView( r_v , r, AcceleratorRead);
|
||||
autoView( v_v , v, AcceleratorRead);
|
||||
accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss));
|
||||
});
|
||||
}
|
||||
LinearCombTimer.Stop();
|
||||
LinalgTimer.Stop();
|
||||
|
||||
MatrixTimer.Start();
|
||||
Linop.Op(p,v);
|
||||
MatrixTimer.Stop();
|
||||
|
||||
LinalgTimer.Start();
|
||||
InnerTimer.Start();
|
||||
ComplexD Calpha = innerProduct(rhat,v);
|
||||
InnerTimer.Stop();
|
||||
alpha = rho / Calpha.real();
|
||||
|
||||
LinearCombTimer.Start();
|
||||
{
|
||||
autoView( p_v , p, AcceleratorRead);
|
||||
autoView( r_v , r, AcceleratorRead);
|
||||
autoView( v_v , v, AcceleratorRead);
|
||||
autoView( psi_v,psi, AcceleratorRead);
|
||||
autoView( h_v , h, AcceleratorWrite);
|
||||
autoView( s_v , s, AcceleratorWrite);
|
||||
accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss));
|
||||
});
|
||||
accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss));
|
||||
});
|
||||
}
|
||||
LinearCombTimer.Stop();
|
||||
LinalgTimer.Stop();
|
||||
|
||||
MatrixTimer.Start();
|
||||
Linop.Op(s,t);
|
||||
MatrixTimer.Stop();
|
||||
|
||||
LinalgTimer.Start();
|
||||
InnerTimer.Start();
|
||||
ComplexD Comega = innerProduct(t,s);
|
||||
InnerTimer.Stop();
|
||||
omega = Comega.real() / norm2(t);
|
||||
|
||||
LinearCombTimer.Start();
|
||||
{
|
||||
autoView( psi_v,psi, AcceleratorWrite);
|
||||
autoView( r_v , r, AcceleratorWrite);
|
||||
autoView( h_v , h, AcceleratorRead);
|
||||
autoView( s_v , s, AcceleratorRead);
|
||||
autoView( t_v , t, AcceleratorRead);
|
||||
accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss));
|
||||
coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss));
|
||||
});
|
||||
}
|
||||
LinearCombTimer.Stop();
|
||||
|
||||
cp = norm2(r);
|
||||
LinalgTimer.Stop();
|
||||
|
||||
std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
|
||||
|
||||
// Stopping condition
|
||||
if(cp <= rsq)
|
||||
{
|
||||
SolverTimer.Stop();
|
||||
Linop.Op(psi, v);
|
||||
p = v - src;
|
||||
|
||||
RealD srcnorm = sqrt(norm2(src));
|
||||
RealD resnorm = sqrt(norm2(p));
|
||||
RealD true_residual = resnorm / srcnorm;
|
||||
|
||||
std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl;
|
||||
std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl;
|
||||
std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl;
|
||||
std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl;
|
||||
|
||||
std::cout << GridLogMessage << "Time breakdown " << std::endl;
|
||||
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() << std::endl;
|
||||
std::cout << GridLogMessage << "\tMatrix " << MatrixTimer.Elapsed() << std::endl;
|
||||
std::cout << GridLogMessage << "\tLinalg " << LinalgTimer.Elapsed() << std::endl;
|
||||
std::cout << GridLogMessage << "\tInner " << InnerTimer.Elapsed() << std::endl;
|
||||
std::cout << GridLogMessage << "\tAxpyNorm " << AxpyNormTimer.Elapsed() << std::endl;
|
||||
std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl;
|
||||
|
||||
if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); }
|
||||
|
||||
IterationsToComplete = k;
|
||||
|
||||
return;
|
||||
}
|
||||
}
|
||||
|
||||
std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl;
|
||||
|
||||
if(ErrorOnNoConverge){ assert(0); }
|
||||
IterationsToComplete = k;
|
||||
}
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
158
Grid/algorithms/iterative/BiCGSTABMixedPrec.h
Normal file
158
Grid/algorithms/iterative/BiCGSTABMixedPrec.h
Normal file
@ -0,0 +1,158 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Christopher Kelly <ckelly@phys.columbia.edu>
|
||||
Author: David Murphy <djmurphy@mit.edu>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#ifndef GRID_BICGSTAB_MIXED_PREC_H
|
||||
#define GRID_BICGSTAB_MIXED_PREC_H
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
// Mixed precision restarted defect correction BiCGSTAB
|
||||
template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>
|
||||
class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD>
|
||||
{
|
||||
public:
|
||||
RealD Tolerance;
|
||||
RealD InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed
|
||||
Integer MaxInnerIterations;
|
||||
Integer MaxOuterIterations;
|
||||
GridBase* SinglePrecGrid; // Grid for single-precision fields
|
||||
RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance
|
||||
LinearOperatorBase<FieldF> &Linop_f;
|
||||
LinearOperatorBase<FieldD> &Linop_d;
|
||||
|
||||
Integer TotalInnerIterations; //Number of inner CG iterations
|
||||
Integer TotalOuterIterations; //Number of restarts
|
||||
Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step
|
||||
|
||||
//Option to speed up *inner single precision* solves using a LinearFunction that produces a guess
|
||||
LinearFunction<FieldF> *guesser;
|
||||
|
||||
MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid,
|
||||
LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) :
|
||||
Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit),
|
||||
MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {};
|
||||
|
||||
void useGuesser(LinearFunction<FieldF>& g){
|
||||
guesser = &g;
|
||||
}
|
||||
|
||||
void operator() (const FieldD& src_d_in, FieldD& sol_d)
|
||||
{
|
||||
TotalInnerIterations = 0;
|
||||
|
||||
GridStopWatch TotalTimer;
|
||||
TotalTimer.Start();
|
||||
|
||||
int cb = src_d_in.Checkerboard();
|
||||
sol_d.Checkerboard() = cb;
|
||||
|
||||
RealD src_norm = norm2(src_d_in);
|
||||
RealD stop = src_norm * Tolerance*Tolerance;
|
||||
|
||||
GridBase* DoublePrecGrid = src_d_in.Grid();
|
||||
FieldD tmp_d(DoublePrecGrid);
|
||||
tmp_d.Checkerboard() = cb;
|
||||
|
||||
FieldD tmp2_d(DoublePrecGrid);
|
||||
tmp2_d.Checkerboard() = cb;
|
||||
|
||||
FieldD src_d(DoublePrecGrid);
|
||||
src_d = src_d_in; //source for next inner iteration, computed from residual during operation
|
||||
|
||||
RealD inner_tol = InnerTolerance;
|
||||
|
||||
FieldF src_f(SinglePrecGrid);
|
||||
src_f.Checkerboard() = cb;
|
||||
|
||||
FieldF sol_f(SinglePrecGrid);
|
||||
sol_f.Checkerboard() = cb;
|
||||
|
||||
BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations);
|
||||
CG_f.ErrorOnNoConverge = false;
|
||||
|
||||
GridStopWatch InnerCGtimer;
|
||||
|
||||
GridStopWatch PrecChangeTimer;
|
||||
|
||||
Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count
|
||||
|
||||
for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++)
|
||||
{
|
||||
// Compute double precision rsd and also new RHS vector.
|
||||
Linop_d.Op(sol_d, tmp_d);
|
||||
RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector
|
||||
|
||||
std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl;
|
||||
|
||||
if(norm < OuterLoopNormMult * stop){
|
||||
std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl;
|
||||
break;
|
||||
}
|
||||
while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ??
|
||||
|
||||
PrecChangeTimer.Start();
|
||||
precisionChange(src_f, src_d);
|
||||
PrecChangeTimer.Stop();
|
||||
|
||||
sol_f = Zero();
|
||||
|
||||
//Optionally improve inner solver guess (eg using known eigenvectors)
|
||||
if(guesser != NULL){ (*guesser)(src_f, sol_f); }
|
||||
|
||||
//Inner CG
|
||||
CG_f.Tolerance = inner_tol;
|
||||
InnerCGtimer.Start();
|
||||
CG_f(Linop_f, src_f, sol_f);
|
||||
InnerCGtimer.Stop();
|
||||
TotalInnerIterations += CG_f.IterationsToComplete;
|
||||
|
||||
//Convert sol back to double and add to double prec solution
|
||||
PrecChangeTimer.Start();
|
||||
precisionChange(tmp_d, sol_f);
|
||||
PrecChangeTimer.Stop();
|
||||
|
||||
axpy(sol_d, 1.0, tmp_d, sol_d);
|
||||
}
|
||||
|
||||
//Final trial CG
|
||||
std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl;
|
||||
|
||||
BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations);
|
||||
CG_d(Linop_d, src_d_in, sol_d);
|
||||
TotalFinalStepIterations = CG_d.IterationsToComplete;
|
||||
|
||||
TotalTimer.Stop();
|
||||
std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl;
|
||||
std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl;
|
||||
}
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
@ -52,6 +52,7 @@ class BlockConjugateGradient : public OperatorFunction<Field> {
|
||||
Integer MaxIterations;
|
||||
Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
|
||||
Integer PrintInterval; //GridLogMessages or Iterative
|
||||
RealD TrueResidual;
|
||||
|
||||
BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true)
|
||||
: Tolerance(tol), CGtype(cgtype), blockDim(_Orthog), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100)
|
||||
@ -306,7 +307,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X)
|
||||
|
||||
Linop.HermOp(X, AD);
|
||||
AD = AD-B;
|
||||
std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl;
|
||||
TrueResidual = std::sqrt(norm2(AD)/norm2(B));
|
||||
std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl;
|
||||
|
||||
std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
|
||||
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() <<std::endl;
|
||||
@ -442,7 +444,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &
|
||||
|
||||
Linop.HermOp(Psi, AP);
|
||||
AP = AP-Src;
|
||||
std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl;
|
||||
TrueResidual = std::sqrt(norm2(AP)/norm2(Src));
|
||||
std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl;
|
||||
|
||||
std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
|
||||
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() <<std::endl;
|
||||
@ -653,7 +656,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field
|
||||
if ( rr > max_resid ) max_resid = rr;
|
||||
}
|
||||
|
||||
std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< sqrt(rrsum/sssum) << " max "<< sqrt(max_resid) <<std::endl;
|
||||
std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl;
|
||||
|
||||
if ( max_resid < Tolerance*Tolerance ) {
|
||||
|
||||
@ -668,7 +671,8 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field
|
||||
|
||||
for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]);
|
||||
for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b];
|
||||
std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(normv(AD)/normv(B)) <<std::endl;
|
||||
TrueResidual = std::sqrt(normv(AD)/normv(B));
|
||||
std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl;
|
||||
|
||||
std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
|
||||
std::cout << GridLogMessage << "\tElapsed " << SolverTimer.Elapsed() <<std::endl;
|
||||
|
@ -49,6 +49,7 @@ public:
|
||||
RealD Tolerance;
|
||||
Integer MaxIterations;
|
||||
Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
|
||||
RealD TrueResidual;
|
||||
|
||||
ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true)
|
||||
: Tolerance(tol),
|
||||
@ -81,6 +82,14 @@ public:
|
||||
cp = a;
|
||||
ssq = norm2(src);
|
||||
|
||||
// Handle trivial case of zero src
|
||||
if (ssq == 0.){
|
||||
psi = Zero();
|
||||
IterationsToComplete = 1;
|
||||
TrueResidual = 0.;
|
||||
return;
|
||||
}
|
||||
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl;
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: src " << ssq << std::endl;
|
||||
std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: mp " << d << std::endl;
|
||||
@ -92,6 +101,7 @@ public:
|
||||
|
||||
// Check if guess is really REALLY good :)
|
||||
if (cp <= rsq) {
|
||||
TrueResidual = std::sqrt(a/ssq);
|
||||
std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl;
|
||||
IterationsToComplete = 0;
|
||||
return;
|
||||
@ -130,18 +140,20 @@ public:
|
||||
b = cp / c;
|
||||
|
||||
LinearCombTimer.Start();
|
||||
auto psi_v = psi.View();
|
||||
auto p_v = p.View();
|
||||
auto r_v = r.View();
|
||||
accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(psi_v[ss], a * p_v(ss) + psi_v(ss));
|
||||
coalescedWrite(p_v[ss] , b * p_v(ss) + r_v (ss));
|
||||
});
|
||||
{
|
||||
autoView( psi_v , psi, AcceleratorWrite);
|
||||
autoView( p_v , p, AcceleratorWrite);
|
||||
autoView( r_v , r, AcceleratorWrite);
|
||||
accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{
|
||||
coalescedWrite(psi_v[ss], a * p_v(ss) + psi_v(ss));
|
||||
coalescedWrite(p_v[ss] , b * p_v(ss) + r_v (ss));
|
||||
});
|
||||
}
|
||||
LinearCombTimer.Stop();
|
||||
LinalgTimer.Stop();
|
||||
|
||||
std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k
|
||||
<< " residual^2 " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
|
||||
<< " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl;
|
||||
|
||||
// Stopping condition
|
||||
if (cp <= rsq) {
|
||||
@ -169,10 +181,17 @@ public:
|
||||
if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0);
|
||||
|
||||
IterationsToComplete = k;
|
||||
TrueResidual = true_residual;
|
||||
|
||||
return;
|
||||
}
|
||||
}
|
||||
// Failed. Calculate true residual before giving up
|
||||
Linop.HermOpAndNorm(psi, mmp, d, qq);
|
||||
p = mmp - src;
|
||||
|
||||
TrueResidual = sqrt(norm2(p)/ssq);
|
||||
|
||||
std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl;
|
||||
|
||||
if (ErrorOnNoConverge) assert(0);
|
||||
|
@ -46,15 +46,19 @@ public:
|
||||
|
||||
RealD Tolerance;
|
||||
Integer MaxIterations;
|
||||
Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
|
||||
Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
|
||||
std::vector<int> IterationsToCompleteShift; // Iterations for this shift
|
||||
int verbose;
|
||||
MultiShiftFunction shifts;
|
||||
std::vector<RealD> TrueResidualShift;
|
||||
|
||||
ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :
|
||||
MaxIterations(maxit),
|
||||
shifts(_shifts)
|
||||
{
|
||||
verbose=1;
|
||||
IterationsToCompleteShift.resize(_shifts.order);
|
||||
TrueResidualShift.resize(_shifts.order);
|
||||
}
|
||||
|
||||
void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi)
|
||||
@ -125,6 +129,17 @@ public:
|
||||
// Residuals "r" are src
|
||||
// First search direction "p" is also src
|
||||
cp = norm2(src);
|
||||
|
||||
// Handle trivial case of zero src.
|
||||
if( cp == 0. ){
|
||||
for(int s=0;s<nshift;s++){
|
||||
psi[s] = Zero();
|
||||
IterationsToCompleteShift[s] = 1;
|
||||
TrueResidualShift[s] = 0.;
|
||||
}
|
||||
return;
|
||||
}
|
||||
|
||||
for(int s=0;s<nshift;s++){
|
||||
rsq[s] = cp * mresidual[s] * mresidual[s];
|
||||
std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s
|
||||
@ -270,6 +285,7 @@ public:
|
||||
for(int s=0;s<nshift;s++){
|
||||
|
||||
if ( (!converged[s]) ){
|
||||
IterationsToCompleteShift[s] = k;
|
||||
|
||||
RealD css = c * z[s][iz]* z[s][iz];
|
||||
|
||||
@ -299,7 +315,8 @@ public:
|
||||
axpy(r,-alpha[s],src,tmp);
|
||||
RealD rn = norm2(r);
|
||||
RealD cn = norm2(src);
|
||||
std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<<std::sqrt(rn/cn)<<std::endl;
|
||||
TrueResidualShift[s] = std::sqrt(rn/cn);
|
||||
std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl;
|
||||
}
|
||||
|
||||
std::cout << GridLogMessage << "Time Breakdown "<<std::endl;
|
||||
|
@ -37,211 +37,6 @@ Author: Christoph Lehner <clehner@bnl.gov>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
////////////////////////////////////////////////////////
|
||||
// Move following 100 LOC to lattice/Lattice_basis.h
|
||||
////////////////////////////////////////////////////////
|
||||
template<class Field>
|
||||
void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)
|
||||
{
|
||||
// If assume basis[j] are already orthonormal,
|
||||
// can take all inner products in parallel saving 2x bandwidth
|
||||
// Save 3x bandwidth on the second line of loop.
|
||||
// perhaps 2.5x speed up.
|
||||
// 2x overall in Multigrid Lanczos
|
||||
for(int j=0; j<k; ++j){
|
||||
auto ip = innerProduct(basis[j],w);
|
||||
w = w - ip*basis[j];
|
||||
}
|
||||
}
|
||||
|
||||
template<class Field>
|
||||
void basisRotate(std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j0, int j1, int k0,int k1,int Nm)
|
||||
{
|
||||
typedef decltype(basis[0].View()) View;
|
||||
auto tmp_v = basis[0].View();
|
||||
Vector<View> basis_v(basis.size(),tmp_v);
|
||||
typedef typename Field::vector_object vobj;
|
||||
GridBase* grid = basis[0].Grid();
|
||||
|
||||
for(int k=0;k<basis.size();k++){
|
||||
basis_v[k] = basis[k].View();
|
||||
}
|
||||
#if 0
|
||||
std::vector < vobj , commAllocator<vobj> > Bt(thread_max() * Nm); // Thread private
|
||||
thread_region
|
||||
{
|
||||
vobj* B = Bt.data() + Nm * thread_num();
|
||||
|
||||
thread_for_in_region(ss, grid->oSites(),{
|
||||
for(int j=j0; j<j1; ++j) B[j]=0.;
|
||||
|
||||
for(int j=j0; j<j1; ++j){
|
||||
for(int k=k0; k<k1; ++k){
|
||||
B[j] +=Qt(j,k) * basis_v[k][ss];
|
||||
}
|
||||
}
|
||||
for(int j=j0; j<j1; ++j){
|
||||
basis_v[j][ss] = B[j];
|
||||
}
|
||||
});
|
||||
}
|
||||
#else
|
||||
|
||||
int nrot = j1-j0;
|
||||
|
||||
|
||||
uint64_t oSites =grid->oSites();
|
||||
uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead
|
||||
|
||||
// printf("BasisRotate %d %d nrot %d siteBlock %d\n",j0,j1,nrot,siteBlock);
|
||||
|
||||
Vector <vobj> Bt(siteBlock * nrot);
|
||||
auto Bp=&Bt[0];
|
||||
|
||||
// GPU readable copy of Eigen matrix
|
||||
Vector<double> Qt_jv(Nm*Nm);
|
||||
double *Qt_p = & Qt_jv[0];
|
||||
for(int k=0;k<Nm;++k){
|
||||
for(int j=0;j<Nm;++j){
|
||||
Qt_p[j*Nm+k]=Qt(j,k);
|
||||
}
|
||||
}
|
||||
|
||||
// Block the loop to keep storage footprint down
|
||||
vobj zz=Zero();
|
||||
for(uint64_t s=0;s<oSites;s+=siteBlock){
|
||||
|
||||
// remaining work in this block
|
||||
int ssites=MIN(siteBlock,oSites-s);
|
||||
|
||||
// zero out the accumulators
|
||||
accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{
|
||||
auto z=coalescedRead(zz);
|
||||
coalescedWrite(Bp[ss],z);
|
||||
});
|
||||
|
||||
accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
|
||||
|
||||
int j =sj%nrot;
|
||||
int jj =j0+j;
|
||||
int ss =sj/nrot;
|
||||
int sss=ss+s;
|
||||
|
||||
for(int k=k0; k<k1; ++k){
|
||||
auto tmp = coalescedRead(Bp[ss*nrot+j]);
|
||||
coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss]));
|
||||
}
|
||||
});
|
||||
|
||||
accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
|
||||
int j =sj%nrot;
|
||||
int jj =j0+j;
|
||||
int ss =sj/nrot;
|
||||
int sss=ss+s;
|
||||
coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j]));
|
||||
});
|
||||
}
|
||||
#endif
|
||||
}
|
||||
|
||||
// Extract a single rotated vector
|
||||
template<class Field>
|
||||
void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)
|
||||
{
|
||||
typedef decltype(basis[0].View()) View;
|
||||
typedef typename Field::vector_object vobj;
|
||||
GridBase* grid = basis[0].Grid();
|
||||
|
||||
result.Checkerboard() = basis[0].Checkerboard();
|
||||
auto result_v=result.View();
|
||||
Vector<View> basis_v(basis.size(),result_v);
|
||||
for(int k=0;k<basis.size();k++){
|
||||
basis_v[k] = basis[k].View();
|
||||
}
|
||||
vobj zz=Zero();
|
||||
Vector<double> Qt_jv(Nm);
|
||||
double * Qt_j = & Qt_jv[0];
|
||||
for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k);
|
||||
accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{
|
||||
auto B=coalescedRead(zz);
|
||||
for(int k=k0; k<k1; ++k){
|
||||
B +=Qt_j[k] * coalescedRead(basis_v[k][ss]);
|
||||
}
|
||||
coalescedWrite(result_v[ss], B);
|
||||
});
|
||||
}
|
||||
|
||||
template<class Field>
|
||||
void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)
|
||||
{
|
||||
int vlen = idx.size();
|
||||
|
||||
assert(vlen>=1);
|
||||
assert(vlen<=sort_vals.size());
|
||||
assert(vlen<=_v.size());
|
||||
|
||||
for (size_t i=0;i<vlen;i++) {
|
||||
|
||||
if (idx[i] != i) {
|
||||
|
||||
//////////////////////////////////////
|
||||
// idx[i] is a table of desired sources giving a permutation.
|
||||
// Swap v[i] with v[idx[i]].
|
||||
// Find j>i for which _vnew[j] = _vold[i],
|
||||
// track the move idx[j] => idx[i]
|
||||
// track the move idx[i] => i
|
||||
//////////////////////////////////////
|
||||
size_t j;
|
||||
for (j=i;j<idx.size();j++)
|
||||
if (idx[j]==i)
|
||||
break;
|
||||
|
||||
assert(idx[i] > i); assert(j!=idx.size()); assert(idx[j]==i);
|
||||
|
||||
swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy
|
||||
std::swap(sort_vals[i],sort_vals[idx[i]]);
|
||||
|
||||
idx[j] = idx[i];
|
||||
idx[i] = i;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)
|
||||
{
|
||||
std::vector<int> idx(sort_vals.size());
|
||||
std::iota(idx.begin(), idx.end(), 0);
|
||||
|
||||
// sort indexes based on comparing values in v
|
||||
std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) {
|
||||
return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]);
|
||||
});
|
||||
return idx;
|
||||
}
|
||||
|
||||
template<class Field>
|
||||
void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)
|
||||
{
|
||||
std::vector<int> idx = basisSortGetIndex(sort_vals);
|
||||
if (reverse)
|
||||
std::reverse(idx.begin(), idx.end());
|
||||
|
||||
basisReorderInPlace(_v,sort_vals,idx);
|
||||
}
|
||||
|
||||
// PAB: faster to compute the inner products first then fuse loops.
|
||||
// If performance critical can improve.
|
||||
template<class Field>
|
||||
void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) {
|
||||
result = Zero();
|
||||
assert(_v.size()==eval.size());
|
||||
int N = (int)_v.size();
|
||||
for (int i=0;i<N;i++) {
|
||||
Field& tmp = _v[i];
|
||||
axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result);
|
||||
}
|
||||
}
|
||||
|
||||
/////////////////////////////////////////////////////////////
|
||||
// Implicitly restarted lanczos
|
||||
/////////////////////////////////////////////////////////////
|
||||
|
@ -0,0 +1,241 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#ifndef GRID_PREC_GCR_NON_HERM_H
|
||||
#define GRID_PREC_GCR_NON_HERM_H
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
//VPGCR Abe and Zhang, 2005.
|
||||
//INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING
|
||||
//Computing and Information Volume 2, Number 2, Pages 147-161
|
||||
//NB. Likely not original reference since they are focussing on a preconditioner variant.
|
||||
// but VPGCR was nicely written up in their paper
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
#define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "
|
||||
|
||||
template<class Field>
|
||||
class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> {
|
||||
public:
|
||||
|
||||
RealD Tolerance;
|
||||
Integer MaxIterations;
|
||||
int verbose;
|
||||
int mmax;
|
||||
int nstep;
|
||||
int steps;
|
||||
int level;
|
||||
GridStopWatch PrecTimer;
|
||||
GridStopWatch MatTimer;
|
||||
GridStopWatch LinalgTimer;
|
||||
|
||||
LinearFunction<Field> &Preconditioner;
|
||||
LinearOperatorBase<Field> &Linop;
|
||||
|
||||
void Level(int lv) { level=lv; };
|
||||
|
||||
PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :
|
||||
Tolerance(tol),
|
||||
MaxIterations(maxit),
|
||||
Linop(_Linop),
|
||||
Preconditioner(Prec),
|
||||
mmax(_mmax),
|
||||
nstep(_nstep)
|
||||
{
|
||||
level=1;
|
||||
verbose=1;
|
||||
};
|
||||
|
||||
void operator() (const Field &src, Field &psi){
|
||||
|
||||
psi=Zero();
|
||||
RealD cp, ssq,rsq;
|
||||
ssq=norm2(src);
|
||||
rsq=Tolerance*Tolerance*ssq;
|
||||
|
||||
Field r(src.Grid());
|
||||
|
||||
PrecTimer.Reset();
|
||||
MatTimer.Reset();
|
||||
LinalgTimer.Reset();
|
||||
|
||||
GridStopWatch SolverTimer;
|
||||
SolverTimer.Start();
|
||||
|
||||
steps=0;
|
||||
for(int k=0;k<MaxIterations;k++){
|
||||
|
||||
cp=GCRnStep(src,psi,rsq);
|
||||
|
||||
GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl;
|
||||
|
||||
if(cp<rsq) {
|
||||
|
||||
SolverTimer.Stop();
|
||||
|
||||
Linop.Op(psi,r);
|
||||
axpy(r,-1.0,src,r);
|
||||
RealD tr = norm2(r);
|
||||
GCRLogLevel<<"PGCR: Converged on iteration " <<steps
|
||||
<< " computed residual "<<sqrt(cp/ssq)
|
||||
<< " true residual " <<sqrt(tr/ssq)
|
||||
<< " target " <<Tolerance <<std::endl;
|
||||
|
||||
GCRLogLevel<<"PGCR Time elapsed: Total "<< SolverTimer.Elapsed() <<std::endl;
|
||||
return;
|
||||
}
|
||||
|
||||
}
|
||||
GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl;
|
||||
// assert(0);
|
||||
}
|
||||
|
||||
RealD GCRnStep(const Field &src, Field &psi,RealD rsq){
|
||||
|
||||
RealD cp;
|
||||
ComplexD a, b, zAz;
|
||||
RealD zAAz;
|
||||
ComplexD rq;
|
||||
|
||||
GridBase *grid = src.Grid();
|
||||
|
||||
Field r(grid);
|
||||
Field z(grid);
|
||||
Field tmp(grid);
|
||||
Field ttmp(grid);
|
||||
Field Az(grid);
|
||||
|
||||
////////////////////////////////
|
||||
// history for flexible orthog
|
||||
////////////////////////////////
|
||||
std::vector<Field> q(mmax,grid);
|
||||
std::vector<Field> p(mmax,grid);
|
||||
std::vector<RealD> qq(mmax);
|
||||
|
||||
GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl;
|
||||
|
||||
//////////////////////////////////
|
||||
// initial guess x0 is taken as nonzero.
|
||||
// r0=src-A x0 = src
|
||||
//////////////////////////////////
|
||||
MatTimer.Start();
|
||||
Linop.Op(psi,Az);
|
||||
zAz = innerProduct(Az,psi);
|
||||
zAAz= norm2(Az);
|
||||
MatTimer.Stop();
|
||||
|
||||
|
||||
LinalgTimer.Start();
|
||||
r=src-Az;
|
||||
LinalgTimer.Stop();
|
||||
GCRLogLevel<< "PGCR true residual r = src - A psi "<<norm2(r) <<std::endl;
|
||||
|
||||
/////////////////////
|
||||
// p = Prec(r)
|
||||
/////////////////////
|
||||
|
||||
PrecTimer.Start();
|
||||
Preconditioner(r,z);
|
||||
PrecTimer.Stop();
|
||||
|
||||
MatTimer.Start();
|
||||
Linop.Op(z,Az);
|
||||
MatTimer.Stop();
|
||||
|
||||
LinalgTimer.Start();
|
||||
|
||||
zAz = innerProduct(Az,psi);
|
||||
zAAz= norm2(Az);
|
||||
|
||||
//p[0],q[0],qq[0]
|
||||
p[0]= z;
|
||||
q[0]= Az;
|
||||
qq[0]= zAAz;
|
||||
|
||||
cp =norm2(r);
|
||||
LinalgTimer.Stop();
|
||||
|
||||
for(int k=0;k<nstep;k++){
|
||||
|
||||
steps++;
|
||||
|
||||
int kp = k+1;
|
||||
int peri_k = k %mmax;
|
||||
int peri_kp= kp%mmax;
|
||||
|
||||
LinalgTimer.Start();
|
||||
rq= innerProduct(q[peri_k],r); // what if rAr not real?
|
||||
a = rq/qq[peri_k];
|
||||
|
||||
axpy(psi,a,p[peri_k],psi);
|
||||
|
||||
cp = axpy_norm(r,-a,q[peri_k],r);
|
||||
LinalgTimer.Stop();
|
||||
|
||||
GCRLogLevel<< "PGCR step["<<steps<<"] resid " << cp << " target " <<rsq<<std::endl;
|
||||
|
||||
if((k==nstep-1)||(cp<rsq)){
|
||||
return cp;
|
||||
}
|
||||
|
||||
|
||||
PrecTimer.Start();
|
||||
Preconditioner(r,z);// solve Az = r
|
||||
PrecTimer.Stop();
|
||||
|
||||
MatTimer.Start();
|
||||
Linop.Op(z,Az);
|
||||
MatTimer.Stop();
|
||||
zAz = innerProduct(Az,psi);
|
||||
zAAz= norm2(Az);
|
||||
|
||||
LinalgTimer.Start();
|
||||
|
||||
q[peri_kp]=Az;
|
||||
p[peri_kp]=z;
|
||||
|
||||
int northog = ((kp)>(mmax-1))?(mmax-1):(kp); // if more than mmax done, we orthog all mmax history.
|
||||
for(int back=0;back<northog;back++){
|
||||
|
||||
int peri_back=(k-back)%mmax; assert((k-back)>=0);
|
||||
|
||||
b=-real(innerProduct(q[peri_back],Az))/qq[peri_back];
|
||||
p[peri_kp]=p[peri_kp]+b*p[peri_back];
|
||||
q[peri_kp]=q[peri_kp]+b*q[peri_back];
|
||||
|
||||
}
|
||||
qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm
|
||||
LinalgTimer.Stop();
|
||||
}
|
||||
assert(0); // never reached
|
||||
return cp;
|
||||
}
|
||||
};
|
||||
NAMESPACE_END(Grid);
|
||||
#endif
|
@ -405,6 +405,70 @@ namespace Grid {
|
||||
}
|
||||
};
|
||||
|
||||
template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field>
|
||||
{
|
||||
public:
|
||||
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
|
||||
|
||||
NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false,
|
||||
const bool _solnAsInitGuess = false)
|
||||
: SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {};
|
||||
|
||||
//////////////////////////////////////////////////////
|
||||
// Override RedBlack specialisation
|
||||
//////////////////////////////////////////////////////
|
||||
virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o)
|
||||
{
|
||||
GridBase* grid = _Matrix.RedBlackGrid();
|
||||
GridBase* fgrid = _Matrix.Grid();
|
||||
|
||||
Field tmp(grid);
|
||||
Field Mtmp(grid);
|
||||
|
||||
pickCheckerboard(Even, src_e, src);
|
||||
pickCheckerboard(Odd , src_o, src);
|
||||
|
||||
/////////////////////////////////////////////////////
|
||||
// src_o = Mdag * (source_o - Moe MeeInv source_e)
|
||||
/////////////////////////////////////////////////////
|
||||
_Matrix.MooeeInv(src_e, tmp); assert( tmp.Checkerboard() == Even );
|
||||
_Matrix.Meooe (tmp, Mtmp); assert( Mtmp.Checkerboard() == Odd );
|
||||
src_o -= Mtmp; assert( src_o.Checkerboard() == Odd );
|
||||
}
|
||||
|
||||
virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol)
|
||||
{
|
||||
GridBase* grid = _Matrix.RedBlackGrid();
|
||||
GridBase* fgrid = _Matrix.Grid();
|
||||
|
||||
Field tmp(grid);
|
||||
Field sol_e(grid);
|
||||
Field src_e_i(grid);
|
||||
|
||||
///////////////////////////////////////////////////
|
||||
// sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
|
||||
///////////////////////////////////////////////////
|
||||
_Matrix.Meooe(sol_o, tmp); assert( tmp.Checkerboard() == Even );
|
||||
src_e_i = src_e - tmp; assert( src_e_i.Checkerboard() == Even );
|
||||
_Matrix.MooeeInv(src_e_i, sol_e); assert( sol_e.Checkerboard() == Even );
|
||||
|
||||
setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even );
|
||||
setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd );
|
||||
}
|
||||
|
||||
virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o)
|
||||
{
|
||||
NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix);
|
||||
this->_HermitianRBSolver(_OpEO, src_o, sol_o); assert(sol_o.Checkerboard() == Odd);
|
||||
}
|
||||
|
||||
virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o)
|
||||
{
|
||||
NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix);
|
||||
this->_HermitianRBSolver(_OpEO, src_o, sol_o);
|
||||
}
|
||||
};
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Site diagonal is identity, right preconditioned by Mee^inv
|
||||
// ( 1 - Meo Moo^inv Moe Mee^inv ) phi =( 1 - Meo Moo^inv Moe Mee^inv ) Mee psi = = eta = eta
|
||||
@ -482,5 +546,76 @@ namespace Grid {
|
||||
this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);
|
||||
}
|
||||
};
|
||||
|
||||
template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field>
|
||||
{
|
||||
public:
|
||||
typedef CheckerBoardedSparseMatrixBase<Field> Matrix;
|
||||
|
||||
/////////////////////////////////////////////////////
|
||||
// Wrap the usual normal equations Schur trick
|
||||
/////////////////////////////////////////////////////
|
||||
NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false,
|
||||
const bool _solnAsInitGuess = false)
|
||||
: SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {};
|
||||
|
||||
virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o)
|
||||
{
|
||||
GridBase* grid = _Matrix.RedBlackGrid();
|
||||
GridBase* fgrid = _Matrix.Grid();
|
||||
|
||||
Field tmp(grid);
|
||||
Field Mtmp(grid);
|
||||
|
||||
pickCheckerboard(Even, src_e, src);
|
||||
pickCheckerboard(Odd , src_o, src);
|
||||
|
||||
/////////////////////////////////////////////////////
|
||||
// src_o = Mdag * (source_o - Moe MeeInv source_e)
|
||||
/////////////////////////////////////////////////////
|
||||
_Matrix.MooeeInv(src_e, tmp); assert( tmp.Checkerboard() == Even );
|
||||
_Matrix.Meooe (tmp, Mtmp); assert( Mtmp.Checkerboard() == Odd );
|
||||
src_o -= Mtmp; assert( src_o.Checkerboard() == Odd );
|
||||
}
|
||||
|
||||
virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol)
|
||||
{
|
||||
GridBase* grid = _Matrix.RedBlackGrid();
|
||||
GridBase* fgrid = _Matrix.Grid();
|
||||
|
||||
Field sol_o_i(grid);
|
||||
Field tmp(grid);
|
||||
Field sol_e(grid);
|
||||
|
||||
////////////////////////////////////////////////
|
||||
// MooeeInv due to pecond
|
||||
////////////////////////////////////////////////
|
||||
_Matrix.MooeeInv(sol_o, tmp);
|
||||
sol_o_i = tmp;
|
||||
|
||||
///////////////////////////////////////////////////
|
||||
// sol_e = M_ee^-1 * ( src_e - Meo sol_o )...
|
||||
///////////////////////////////////////////////////
|
||||
_Matrix.Meooe(sol_o_i, tmp); assert( tmp.Checkerboard() == Even );
|
||||
tmp = src_e - tmp; assert( src_e.Checkerboard() == Even );
|
||||
_Matrix.MooeeInv(tmp, sol_e); assert( sol_e.Checkerboard() == Even );
|
||||
|
||||
setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even );
|
||||
setCheckerboard(sol, sol_o_i); assert( sol_o_i.Checkerboard() == Odd );
|
||||
};
|
||||
|
||||
virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o)
|
||||
{
|
||||
NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix);
|
||||
this->_HermitianRBSolver(_OpEO, src_o, sol_o);
|
||||
};
|
||||
|
||||
virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o)
|
||||
{
|
||||
NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix);
|
||||
this->_HermitianRBSolver(_OpEO, src_o, sol_o);
|
||||
}
|
||||
};
|
||||
}
|
||||
|
||||
#endif
|
||||
|
@ -26,118 +26,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#ifndef GRID_ALIGNED_ALLOCATOR_H
|
||||
#define GRID_ALIGNED_ALLOCATOR_H
|
||||
|
||||
#ifdef HAVE_MALLOC_MALLOC_H
|
||||
#include <malloc/malloc.h>
|
||||
#endif
|
||||
#ifdef HAVE_MALLOC_H
|
||||
#include <malloc.h>
|
||||
#endif
|
||||
|
||||
#ifdef HAVE_MM_MALLOC_H
|
||||
#include <mm_malloc.h>
|
||||
#endif
|
||||
|
||||
#define POINTER_CACHE
|
||||
#define GRID_ALLOC_ALIGN (2*1024*1024)
|
||||
#pragma once
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
// Move control to configure.ac and Config.h?
|
||||
#ifdef POINTER_CACHE
|
||||
class PointerCache {
|
||||
private:
|
||||
/*Pinning pages is costly*/
|
||||
/*Could maintain separate large and small allocation caches*/
|
||||
#ifdef GRID_NVCC
|
||||
static const int Ncache=128;
|
||||
#else
|
||||
static const int Ncache=8;
|
||||
#endif
|
||||
static int victim;
|
||||
|
||||
typedef struct {
|
||||
void *address;
|
||||
size_t bytes;
|
||||
int valid;
|
||||
} PointerCacheEntry;
|
||||
|
||||
static PointerCacheEntry Entries[Ncache];
|
||||
|
||||
public:
|
||||
|
||||
static void *Insert(void *ptr,size_t bytes) ;
|
||||
static void *Lookup(size_t bytes) ;
|
||||
|
||||
};
|
||||
#endif
|
||||
|
||||
std::string sizeString(size_t bytes);
|
||||
|
||||
struct MemoryStats
|
||||
{
|
||||
size_t totalAllocated{0}, maxAllocated{0},
|
||||
currentlyAllocated{0}, totalFreed{0};
|
||||
};
|
||||
|
||||
class MemoryProfiler
|
||||
{
|
||||
public:
|
||||
static MemoryStats *stats;
|
||||
static bool debug;
|
||||
};
|
||||
|
||||
#define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")"
|
||||
#define profilerDebugPrint \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] total : " << memString(s->totalAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] max : " << memString(s->maxAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] freed : " << memString(s->totalFreed) \
|
||||
<< std::endl; \
|
||||
}
|
||||
|
||||
#define profilerAllocate(bytes) \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
s->totalAllocated += (bytes); \
|
||||
s->currentlyAllocated += (bytes); \
|
||||
s->maxAllocated = std::max(s->maxAllocated, s->currentlyAllocated); \
|
||||
} \
|
||||
if (MemoryProfiler::debug) \
|
||||
{ \
|
||||
std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \
|
||||
profilerDebugPrint; \
|
||||
}
|
||||
|
||||
#define profilerFree(bytes) \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
s->totalFreed += (bytes); \
|
||||
s->currentlyAllocated -= (bytes); \
|
||||
} \
|
||||
if (MemoryProfiler::debug) \
|
||||
{ \
|
||||
std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \
|
||||
profilerDebugPrint; \
|
||||
}
|
||||
|
||||
void check_huge_pages(void *Buf,uint64_t BYTES);
|
||||
|
||||
////////////////////////////////////////////////////////////////////
|
||||
// A lattice of something, but assume the something is SIMDized.
|
||||
////////////////////////////////////////////////////////////////////
|
||||
|
||||
template<typename _Tp>
|
||||
class alignedAllocator {
|
||||
public:
|
||||
@ -161,89 +53,131 @@ public:
|
||||
{
|
||||
size_type bytes = __n*sizeof(_Tp);
|
||||
profilerAllocate(bytes);
|
||||
|
||||
|
||||
#ifdef POINTER_CACHE
|
||||
_Tp *ptr = (_Tp *) PointerCache::Lookup(bytes);
|
||||
#else
|
||||
pointer ptr = nullptr;
|
||||
#endif
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
////////////////////////////////////
|
||||
// Unified (managed) memory
|
||||
////////////////////////////////////
|
||||
if ( ptr == (_Tp *) NULL ) {
|
||||
// printf(" alignedAllocater cache miss %ld bytes ",bytes); BACKTRACEFP(stdout);
|
||||
auto err = cudaMallocManaged((void **)&ptr,bytes);
|
||||
if( err != cudaSuccess ) {
|
||||
ptr = (_Tp *) NULL;
|
||||
std::cerr << " cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl;
|
||||
assert(0);
|
||||
}
|
||||
}
|
||||
assert( ptr != (_Tp *)NULL);
|
||||
#else
|
||||
//////////////////////////////////////////////////////////////////////////////////////////
|
||||
// 2MB align; could make option probably doesn't need configurability
|
||||
//////////////////////////////////////////////////////////////////////////////////////////
|
||||
#ifdef HAVE_MM_MALLOC_H
|
||||
if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) _mm_malloc(bytes,GRID_ALLOC_ALIGN);
|
||||
#else
|
||||
if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN,bytes);
|
||||
#endif
|
||||
assert( ptr != (_Tp *)NULL);
|
||||
|
||||
//////////////////////////////////////////////////
|
||||
// First touch optimise in threaded loop
|
||||
//////////////////////////////////////////////////
|
||||
uint64_t *cp = (uint64_t *)ptr;
|
||||
thread_for(n,bytes/sizeof(uint64_t), { // need only one touch per page
|
||||
cp[n]=0;
|
||||
});
|
||||
#endif
|
||||
_Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes);
|
||||
assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
|
||||
return ptr;
|
||||
}
|
||||
|
||||
void deallocate(pointer __p, size_type __n) {
|
||||
void deallocate(pointer __p, size_type __n)
|
||||
{
|
||||
size_type bytes = __n * sizeof(_Tp);
|
||||
|
||||
profilerFree(bytes);
|
||||
|
||||
#ifdef POINTER_CACHE
|
||||
pointer __freeme = (pointer)PointerCache::Insert((void *)__p,bytes);
|
||||
#else
|
||||
pointer __freeme = __p;
|
||||
#endif
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
if ( __freeme ) cudaFree((void *)__freeme);
|
||||
#else
|
||||
#ifdef HAVE_MM_MALLOC_H
|
||||
if ( __freeme ) _mm_free((void *)__freeme);
|
||||
#else
|
||||
if ( __freeme ) free((void *)__freeme);
|
||||
#endif
|
||||
#endif
|
||||
MemoryManager::CpuFree((void *)__p,bytes);
|
||||
}
|
||||
|
||||
// FIXME: hack for the copy constructor, eventually it must be avoided
|
||||
void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); };
|
||||
//void construct(pointer __p, const _Tp& __val) { };
|
||||
// FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop
|
||||
void construct(pointer __p, const _Tp& __val) { assert(0);};
|
||||
void construct(pointer __p) { };
|
||||
void destroy(pointer __p) { };
|
||||
};
|
||||
template<typename _Tp> inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; }
|
||||
template<typename _Tp> inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; }
|
||||
|
||||
//////////////////////////////////////////////////////////////////////////////////////
|
||||
// Unified virtual memory
|
||||
//////////////////////////////////////////////////////////////////////////////////////
|
||||
template<typename _Tp>
|
||||
class uvmAllocator {
|
||||
public:
|
||||
typedef std::size_t size_type;
|
||||
typedef std::ptrdiff_t difference_type;
|
||||
typedef _Tp* pointer;
|
||||
typedef const _Tp* const_pointer;
|
||||
typedef _Tp& reference;
|
||||
typedef const _Tp& const_reference;
|
||||
typedef _Tp value_type;
|
||||
|
||||
template<typename _Tp1> struct rebind { typedef uvmAllocator<_Tp1> other; };
|
||||
uvmAllocator() throw() { }
|
||||
uvmAllocator(const uvmAllocator&) throw() { }
|
||||
template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { }
|
||||
~uvmAllocator() throw() { }
|
||||
pointer address(reference __x) const { return &__x; }
|
||||
size_type max_size() const throw() { return size_t(-1) / sizeof(_Tp); }
|
||||
|
||||
pointer allocate(size_type __n, const void* _p= 0)
|
||||
{
|
||||
size_type bytes = __n*sizeof(_Tp);
|
||||
profilerAllocate(bytes);
|
||||
_Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes);
|
||||
assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
|
||||
return ptr;
|
||||
}
|
||||
|
||||
void deallocate(pointer __p, size_type __n)
|
||||
{
|
||||
size_type bytes = __n * sizeof(_Tp);
|
||||
profilerFree(bytes);
|
||||
MemoryManager::SharedFree((void *)__p,bytes);
|
||||
}
|
||||
|
||||
void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); };
|
||||
void construct(pointer __p) { };
|
||||
void destroy(pointer __p) { };
|
||||
};
|
||||
template<typename _Tp> inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; }
|
||||
template<typename _Tp> inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; }
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////////
|
||||
// Device memory
|
||||
////////////////////////////////////////////////////////////////////////////////
|
||||
template<typename _Tp>
|
||||
class devAllocator {
|
||||
public:
|
||||
typedef std::size_t size_type;
|
||||
typedef std::ptrdiff_t difference_type;
|
||||
typedef _Tp* pointer;
|
||||
typedef const _Tp* const_pointer;
|
||||
typedef _Tp& reference;
|
||||
typedef const _Tp& const_reference;
|
||||
typedef _Tp value_type;
|
||||
|
||||
template<typename _Tp1> struct rebind { typedef devAllocator<_Tp1> other; };
|
||||
devAllocator() throw() { }
|
||||
devAllocator(const devAllocator&) throw() { }
|
||||
template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { }
|
||||
~devAllocator() throw() { }
|
||||
pointer address(reference __x) const { return &__x; }
|
||||
size_type max_size() const throw() { return size_t(-1) / sizeof(_Tp); }
|
||||
|
||||
pointer allocate(size_type __n, const void* _p= 0)
|
||||
{
|
||||
size_type bytes = __n*sizeof(_Tp);
|
||||
profilerAllocate(bytes);
|
||||
_Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes);
|
||||
assert( ( (_Tp*)ptr != (_Tp *)NULL ) );
|
||||
return ptr;
|
||||
}
|
||||
|
||||
void deallocate(pointer __p, size_type __n)
|
||||
{
|
||||
size_type bytes = __n * sizeof(_Tp);
|
||||
profilerFree(bytes);
|
||||
MemoryManager::AcceleratorFree((void *)__p,bytes);
|
||||
}
|
||||
void construct(pointer __p, const _Tp& __val) { };
|
||||
void construct(pointer __p) { };
|
||||
void destroy(pointer __p) { };
|
||||
};
|
||||
template<typename _Tp> inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; }
|
||||
template<typename _Tp> inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; }
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////////
|
||||
// Template typedefs
|
||||
////////////////////////////////////////////////////////////////////////////////
|
||||
template<class T> using commAllocator = alignedAllocator<T>;
|
||||
template<class T> using Vector = std::vector<T,alignedAllocator<T> >;
|
||||
template<class T> using commVector = std::vector<T,alignedAllocator<T> >;
|
||||
template<class T> using Matrix = std::vector<std::vector<T,alignedAllocator<T> > >;
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
// Cshift on device
|
||||
template<class T> using cshiftAllocator = devAllocator<T>;
|
||||
#else
|
||||
// Cshift on host
|
||||
template<class T> using cshiftAllocator = std::allocator<T>;
|
||||
#endif
|
||||
|
||||
template<class T> using Vector = std::vector<T,uvmAllocator<T> >;
|
||||
template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;
|
||||
template<class T> using commVector = std::vector<T,devAllocator<T> >;
|
||||
template<class T> using cshiftVector = std::vector<T,cshiftAllocator<T> >;
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
||||
|
||||
|
4
Grid/allocator/Allocator.h
Normal file
4
Grid/allocator/Allocator.h
Normal file
@ -0,0 +1,4 @@
|
||||
#pragma once
|
||||
#include <Grid/allocator/MemoryStats.h>
|
||||
#include <Grid/allocator/MemoryManager.h>
|
||||
#include <Grid/allocator/AlignedAllocator.h>
|
254
Grid/allocator/MemoryManager.cc
Normal file
254
Grid/allocator/MemoryManager.cc
Normal file
@ -0,0 +1,254 @@
|
||||
#include <Grid/GridCore.h>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
/*Allocation types, saying which pointer cache should be used*/
|
||||
#define Cpu (0)
|
||||
#define CpuSmall (1)
|
||||
#define Acc (2)
|
||||
#define AccSmall (3)
|
||||
#define Shared (4)
|
||||
#define SharedSmall (5)
|
||||
uint64_t total_shared;
|
||||
uint64_t total_device;
|
||||
uint64_t total_host;;
|
||||
void MemoryManager::PrintBytes(void)
|
||||
{
|
||||
std::cout << " MemoryManager : "<<total_shared<<" shared bytes "<<std::endl;
|
||||
std::cout << " MemoryManager : "<<total_device<<" accelerator bytes "<<std::endl;
|
||||
std::cout << " MemoryManager : "<<total_host <<" cpu bytes "<<std::endl;
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
// Data tables for recently freed pooiniter caches
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax];
|
||||
int MemoryManager::Victim[MemoryManager::NallocType];
|
||||
int MemoryManager::Ncache[MemoryManager::NallocType] = { 8, 32, 8, 32, 8, 32 };
|
||||
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
// Actual allocation and deallocation utils
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
void *MemoryManager::AcceleratorAllocate(size_t bytes)
|
||||
{
|
||||
void *ptr = (void *) Lookup(bytes,Acc);
|
||||
if ( ptr == (void *) NULL ) {
|
||||
ptr = (void *) acceleratorAllocDevice(bytes);
|
||||
total_device+=bytes;
|
||||
}
|
||||
return ptr;
|
||||
}
|
||||
void MemoryManager::AcceleratorFree (void *ptr,size_t bytes)
|
||||
{
|
||||
void *__freeme = Insert(ptr,bytes,Acc);
|
||||
if ( __freeme ) {
|
||||
acceleratorFreeDevice(__freeme);
|
||||
total_device-=bytes;
|
||||
// PrintBytes();
|
||||
}
|
||||
}
|
||||
void *MemoryManager::SharedAllocate(size_t bytes)
|
||||
{
|
||||
void *ptr = (void *) Lookup(bytes,Shared);
|
||||
if ( ptr == (void *) NULL ) {
|
||||
ptr = (void *) acceleratorAllocShared(bytes);
|
||||
total_shared+=bytes;
|
||||
// std::cout <<"AcceleratorAllocate: allocated Shared pointer "<<std::hex<<ptr<<std::dec<<std::endl;
|
||||
// PrintBytes();
|
||||
}
|
||||
return ptr;
|
||||
}
|
||||
void MemoryManager::SharedFree (void *ptr,size_t bytes)
|
||||
{
|
||||
void *__freeme = Insert(ptr,bytes,Shared);
|
||||
if ( __freeme ) {
|
||||
acceleratorFreeShared(__freeme);
|
||||
total_shared-=bytes;
|
||||
// PrintBytes();
|
||||
}
|
||||
}
|
||||
#ifdef GRID_UVM
|
||||
void *MemoryManager::CpuAllocate(size_t bytes)
|
||||
{
|
||||
void *ptr = (void *) Lookup(bytes,Cpu);
|
||||
if ( ptr == (void *) NULL ) {
|
||||
ptr = (void *) acceleratorAllocShared(bytes);
|
||||
total_host+=bytes;
|
||||
}
|
||||
return ptr;
|
||||
}
|
||||
void MemoryManager::CpuFree (void *_ptr,size_t bytes)
|
||||
{
|
||||
NotifyDeletion(_ptr);
|
||||
void *__freeme = Insert(_ptr,bytes,Cpu);
|
||||
if ( __freeme ) {
|
||||
acceleratorFreeShared(__freeme);
|
||||
total_host-=bytes;
|
||||
}
|
||||
}
|
||||
#else
|
||||
void *MemoryManager::CpuAllocate(size_t bytes)
|
||||
{
|
||||
void *ptr = (void *) Lookup(bytes,Cpu);
|
||||
if ( ptr == (void *) NULL ) {
|
||||
ptr = (void *) acceleratorAllocCpu(bytes);
|
||||
total_host+=bytes;
|
||||
}
|
||||
return ptr;
|
||||
}
|
||||
void MemoryManager::CpuFree (void *_ptr,size_t bytes)
|
||||
{
|
||||
NotifyDeletion(_ptr);
|
||||
void *__freeme = Insert(_ptr,bytes,Cpu);
|
||||
if ( __freeme ) {
|
||||
acceleratorFreeCpu(__freeme);
|
||||
total_host-=bytes;
|
||||
}
|
||||
}
|
||||
#endif
|
||||
|
||||
//////////////////////////////////////////
|
||||
// call only once
|
||||
//////////////////////////////////////////
|
||||
void MemoryManager::Init(void)
|
||||
{
|
||||
|
||||
char * str;
|
||||
int Nc;
|
||||
int NcS;
|
||||
|
||||
str= getenv("GRID_ALLOC_NCACHE_LARGE");
|
||||
if ( str ) {
|
||||
Nc = atoi(str);
|
||||
if ( (Nc>=0) && (Nc < NallocCacheMax)) {
|
||||
Ncache[Cpu]=Nc;
|
||||
Ncache[Acc]=Nc;
|
||||
Ncache[Shared]=Nc;
|
||||
}
|
||||
}
|
||||
|
||||
str= getenv("GRID_ALLOC_NCACHE_SMALL");
|
||||
if ( str ) {
|
||||
Nc = atoi(str);
|
||||
if ( (Nc>=0) && (Nc < NallocCacheMax)) {
|
||||
Ncache[CpuSmall]=Nc;
|
||||
Ncache[AccSmall]=Nc;
|
||||
Ncache[SharedSmall]=Nc;
|
||||
}
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
void MemoryManager::InitMessage(void) {
|
||||
|
||||
#ifndef GRID_UVM
|
||||
std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl;
|
||||
#endif
|
||||
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl;
|
||||
#ifdef ALLOCATION_CACHE
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<std::endl;
|
||||
#endif
|
||||
|
||||
#ifdef GRID_UVM
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl;
|
||||
#ifdef GRID_CUDA
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl;
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl;
|
||||
#endif
|
||||
#ifdef GRID_SYCL
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl;
|
||||
#endif
|
||||
#else
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl;
|
||||
#ifdef GRID_CUDA
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl;
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl;
|
||||
#endif
|
||||
#ifdef GRID_SYCL
|
||||
std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl;
|
||||
#endif
|
||||
#endif
|
||||
|
||||
}
|
||||
|
||||
void *MemoryManager::Insert(void *ptr,size_t bytes,int type)
|
||||
{
|
||||
#ifdef ALLOCATION_CACHE
|
||||
bool small = (bytes < GRID_ALLOC_SMALL_LIMIT);
|
||||
int cache = type + small;
|
||||
return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache]);
|
||||
#else
|
||||
return ptr;
|
||||
#endif
|
||||
}
|
||||
|
||||
void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim)
|
||||
{
|
||||
assert(ncache>0);
|
||||
#ifdef GRID_OMP
|
||||
assert(omp_in_parallel()==0);
|
||||
#endif
|
||||
|
||||
void * ret = NULL;
|
||||
int v = -1;
|
||||
|
||||
for(int e=0;e<ncache;e++) {
|
||||
if ( entries[e].valid==0 ) {
|
||||
v=e;
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
if ( v==-1 ) {
|
||||
v=victim;
|
||||
victim = (victim+1)%ncache;
|
||||
}
|
||||
|
||||
if ( entries[v].valid ) {
|
||||
ret = entries[v].address;
|
||||
entries[v].valid = 0;
|
||||
entries[v].address = NULL;
|
||||
entries[v].bytes = 0;
|
||||
}
|
||||
|
||||
entries[v].address=ptr;
|
||||
entries[v].bytes =bytes;
|
||||
entries[v].valid =1;
|
||||
|
||||
return ret;
|
||||
}
|
||||
|
||||
void *MemoryManager::Lookup(size_t bytes,int type)
|
||||
{
|
||||
#ifdef ALLOCATION_CACHE
|
||||
bool small = (bytes < GRID_ALLOC_SMALL_LIMIT);
|
||||
int cache = type+small;
|
||||
return Lookup(bytes,Entries[cache],Ncache[cache]);
|
||||
#else
|
||||
return NULL;
|
||||
#endif
|
||||
}
|
||||
|
||||
void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache)
|
||||
{
|
||||
assert(ncache>0);
|
||||
#ifdef GRID_OMP
|
||||
assert(omp_in_parallel()==0);
|
||||
#endif
|
||||
for(int e=0;e<ncache;e++){
|
||||
if ( entries[e].valid && ( entries[e].bytes == bytes ) ) {
|
||||
entries[e].valid = 0;
|
||||
return entries[e].address;
|
||||
}
|
||||
}
|
||||
return NULL;
|
||||
}
|
||||
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
180
Grid/allocator/MemoryManager.h
Normal file
180
Grid/allocator/MemoryManager.h
Normal file
@ -0,0 +1,180 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/MemoryManager.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#pragma once
|
||||
#include <list>
|
||||
#include <unordered_map>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
// Move control to configure.ac and Config.h?
|
||||
|
||||
#define GRID_ALLOC_SMALL_LIMIT (4096)
|
||||
|
||||
/*Pinning pages is costly*/
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Advise the LatticeAccelerator class
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
enum ViewAdvise {
|
||||
AdviseDefault = 0x0, // Regular data
|
||||
AdviseInfrequentUse = 0x1 // Advise that the data is used infrequently. This can
|
||||
// significantly influence performance of bulk storage.
|
||||
|
||||
// AdviseTransient = 0x2, // Data will mostly be read. On some architectures
|
||||
// enables read-only copies of memory to be kept on
|
||||
// host and device.
|
||||
|
||||
// AdviseAcceleratorWriteDiscard = 0x4 // Field will be written in entirety on device
|
||||
|
||||
};
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// View Access Mode
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
enum ViewMode {
|
||||
AcceleratorRead = 0x01,
|
||||
AcceleratorWrite = 0x02,
|
||||
AcceleratorWriteDiscard = 0x04,
|
||||
CpuRead = 0x08,
|
||||
CpuWrite = 0x10,
|
||||
CpuWriteDiscard = 0x10 // same for now
|
||||
};
|
||||
|
||||
class MemoryManager {
|
||||
private:
|
||||
|
||||
////////////////////////////////////////////////////////////
|
||||
// For caching recently freed allocations
|
||||
////////////////////////////////////////////////////////////
|
||||
typedef struct {
|
||||
void *address;
|
||||
size_t bytes;
|
||||
int valid;
|
||||
} AllocationCacheEntry;
|
||||
|
||||
static const int NallocCacheMax=128;
|
||||
static const int NallocType=6;
|
||||
static AllocationCacheEntry Entries[NallocType][NallocCacheMax];
|
||||
static int Victim[NallocType];
|
||||
static int Ncache[NallocType];
|
||||
|
||||
/////////////////////////////////////////////////
|
||||
// Free pool
|
||||
/////////////////////////////////////////////////
|
||||
static void *Insert(void *ptr,size_t bytes,int type) ;
|
||||
static void *Lookup(size_t bytes,int type) ;
|
||||
static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim) ;
|
||||
static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache) ;
|
||||
|
||||
static void PrintBytes(void);
|
||||
public:
|
||||
static void Init(void);
|
||||
static void InitMessage(void);
|
||||
static void *AcceleratorAllocate(size_t bytes);
|
||||
static void AcceleratorFree (void *ptr,size_t bytes);
|
||||
static void *SharedAllocate(size_t bytes);
|
||||
static void SharedFree (void *ptr,size_t bytes);
|
||||
static void *CpuAllocate(size_t bytes);
|
||||
static void CpuFree (void *ptr,size_t bytes);
|
||||
|
||||
////////////////////////////////////////////////////////
|
||||
// Footprint tracking
|
||||
////////////////////////////////////////////////////////
|
||||
static uint64_t DeviceBytes;
|
||||
static uint64_t DeviceLRUBytes;
|
||||
static uint64_t DeviceMaxBytes;
|
||||
static uint64_t HostToDeviceBytes;
|
||||
static uint64_t DeviceToHostBytes;
|
||||
static uint64_t HostToDeviceXfer;
|
||||
static uint64_t DeviceToHostXfer;
|
||||
|
||||
private:
|
||||
#ifndef GRID_UVM
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
// Data tables for ViewCache
|
||||
//////////////////////////////////////////////////////////////////////
|
||||
typedef std::list<uint64_t> LRU_t;
|
||||
typedef typename LRU_t::iterator LRUiterator;
|
||||
typedef struct {
|
||||
int LRU_valid;
|
||||
LRUiterator LRU_entry;
|
||||
uint64_t CpuPtr;
|
||||
uint64_t AccPtr;
|
||||
size_t bytes;
|
||||
uint32_t transient;
|
||||
uint32_t state;
|
||||
uint32_t accLock;
|
||||
uint32_t cpuLock;
|
||||
} AcceleratorViewEntry;
|
||||
|
||||
typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t;
|
||||
typedef typename AccViewTable_t::iterator AccViewTableIterator ;
|
||||
|
||||
static AccViewTable_t AccViewTable;
|
||||
static LRU_t LRU;
|
||||
|
||||
/////////////////////////////////////////////////
|
||||
// Device motion
|
||||
/////////////////////////////////////////////////
|
||||
static void Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||
static void EvictVictims(uint64_t bytes); // Frees up <bytes>
|
||||
static void Evict(AcceleratorViewEntry &AccCache);
|
||||
static void Flush(AcceleratorViewEntry &AccCache);
|
||||
static void Clone(AcceleratorViewEntry &AccCache);
|
||||
static void AccDiscard(AcceleratorViewEntry &AccCache);
|
||||
static void CpuDiscard(AcceleratorViewEntry &AccCache);
|
||||
|
||||
// static void LRUupdate(AcceleratorViewEntry &AccCache);
|
||||
static void LRUinsert(AcceleratorViewEntry &AccCache);
|
||||
static void LRUremove(AcceleratorViewEntry &AccCache);
|
||||
|
||||
// manage entries in the table
|
||||
static int EntryPresent(uint64_t CpuPtr);
|
||||
static void EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||
static void EntryErase (uint64_t CpuPtr);
|
||||
static AccViewTableIterator EntryLookup(uint64_t CpuPtr);
|
||||
static void EntrySet (uint64_t CpuPtr,AcceleratorViewEntry &entry);
|
||||
|
||||
static void AcceleratorViewClose(uint64_t AccPtr);
|
||||
static uint64_t AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||
static void CpuViewClose(uint64_t Ptr);
|
||||
static uint64_t CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||
#endif
|
||||
static void NotifyDeletion(void * CpuPtr);
|
||||
|
||||
public:
|
||||
static void Print(void);
|
||||
static int isOpen (void* CpuPtr);
|
||||
static void ViewClose(void* CpuPtr,ViewMode mode);
|
||||
static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint);
|
||||
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
|
478
Grid/allocator/MemoryManagerCache.cc
Normal file
478
Grid/allocator/MemoryManagerCache.cc
Normal file
@ -0,0 +1,478 @@
|
||||
#include <Grid/GridCore.h>
|
||||
#ifndef GRID_UVM
|
||||
|
||||
#warning "Using explicit device memory copies"
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
//define dprintf(...) printf ( __VA_ARGS__ ); fflush(stdout);
|
||||
#define dprintf(...)
|
||||
|
||||
|
||||
////////////////////////////////////////////////////////////
|
||||
// For caching copies of data on device
|
||||
////////////////////////////////////////////////////////////
|
||||
MemoryManager::AccViewTable_t MemoryManager::AccViewTable;
|
||||
MemoryManager::LRU_t MemoryManager::LRU;
|
||||
|
||||
////////////////////////////////////////////////////////
|
||||
// Footprint tracking
|
||||
////////////////////////////////////////////////////////
|
||||
uint64_t MemoryManager::DeviceBytes;
|
||||
uint64_t MemoryManager::DeviceLRUBytes;
|
||||
uint64_t MemoryManager::DeviceMaxBytes = 1024*1024*128;
|
||||
uint64_t MemoryManager::HostToDeviceBytes;
|
||||
uint64_t MemoryManager::DeviceToHostBytes;
|
||||
uint64_t MemoryManager::HostToDeviceXfer;
|
||||
uint64_t MemoryManager::DeviceToHostXfer;
|
||||
|
||||
////////////////////////////////////
|
||||
// Priority ordering for unlocked entries
|
||||
// Empty
|
||||
// CpuDirty
|
||||
// Consistent
|
||||
// AccDirty
|
||||
////////////////////////////////////
|
||||
#define Empty (0x0) /*Entry unoccupied */
|
||||
#define CpuDirty (0x1) /*CPU copy is golden, Acc buffer MAY not be allocated*/
|
||||
#define Consistent (0x2) /*ACC copy AND CPU copy are valid */
|
||||
#define AccDirty (0x4) /*ACC copy is golden */
|
||||
#define EvictNext (0x8) /*Priority for eviction*/
|
||||
|
||||
/////////////////////////////////////////////////
|
||||
// Mechanics of data table maintenance
|
||||
/////////////////////////////////////////////////
|
||||
int MemoryManager::EntryPresent(uint64_t CpuPtr)
|
||||
{
|
||||
if(AccViewTable.empty()) return 0;
|
||||
|
||||
auto count = AccViewTable.count(CpuPtr); assert((count==0)||(count==1));
|
||||
return count;
|
||||
}
|
||||
void MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
|
||||
{
|
||||
assert(!EntryPresent(CpuPtr));
|
||||
AcceleratorViewEntry AccCache;
|
||||
AccCache.CpuPtr = CpuPtr;
|
||||
AccCache.AccPtr = (uint64_t)NULL;
|
||||
AccCache.bytes = bytes;
|
||||
AccCache.state = CpuDirty;
|
||||
AccCache.LRU_valid=0;
|
||||
AccCache.transient=0;
|
||||
AccCache.accLock=0;
|
||||
AccCache.cpuLock=0;
|
||||
AccViewTable[CpuPtr] = AccCache;
|
||||
}
|
||||
MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr)
|
||||
{
|
||||
assert(EntryPresent(CpuPtr));
|
||||
auto AccCacheIterator = AccViewTable.find(CpuPtr);
|
||||
assert(AccCacheIterator!=AccViewTable.end());
|
||||
return AccCacheIterator;
|
||||
}
|
||||
void MemoryManager::EntryErase(uint64_t CpuPtr)
|
||||
{
|
||||
auto AccCache = EntryLookup(CpuPtr);
|
||||
AccViewTable.erase(CpuPtr);
|
||||
}
|
||||
void MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
assert(AccCache.LRU_valid==0);
|
||||
if (AccCache.transient) {
|
||||
LRU.push_back(AccCache.CpuPtr);
|
||||
AccCache.LRU_entry = --LRU.end();
|
||||
} else {
|
||||
LRU.push_front(AccCache.CpuPtr);
|
||||
AccCache.LRU_entry = LRU.begin();
|
||||
}
|
||||
AccCache.LRU_valid = 1;
|
||||
DeviceLRUBytes+=AccCache.bytes;
|
||||
}
|
||||
void MemoryManager::LRUremove(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
assert(AccCache.LRU_valid==1);
|
||||
LRU.erase(AccCache.LRU_entry);
|
||||
AccCache.LRU_valid = 0;
|
||||
DeviceLRUBytes-=AccCache.bytes;
|
||||
}
|
||||
/////////////////////////////////////////////////
|
||||
// Accelerator cache motion & consistency logic
|
||||
/////////////////////////////////////////////////
|
||||
void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
///////////////////////////////////////////////////////////
|
||||
// Remove from Accelerator, remove entry, without flush
|
||||
// Cannot be locked. If allocated Must be in LRU pool.
|
||||
///////////////////////////////////////////////////////////
|
||||
assert(AccCache.state!=Empty);
|
||||
|
||||
dprintf("MemoryManager: Discard(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);
|
||||
assert(AccCache.accLock==0);
|
||||
assert(AccCache.cpuLock==0);
|
||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||
if(AccCache.AccPtr) {
|
||||
AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
|
||||
DeviceBytes -=AccCache.bytes;
|
||||
LRUremove(AccCache);
|
||||
dprintf("MemoryManager: Free(%llx) LRU %lld Total %lld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);
|
||||
}
|
||||
uint64_t CpuPtr = AccCache.CpuPtr;
|
||||
EntryErase(CpuPtr);
|
||||
}
|
||||
|
||||
void MemoryManager::Evict(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
///////////////////////////////////////////////////////////////////////////
|
||||
// Make CPU consistent, remove from Accelerator, remove entry
|
||||
// Cannot be locked. If allocated must be in LRU pool.
|
||||
///////////////////////////////////////////////////////////////////////////
|
||||
assert(AccCache.state!=Empty);
|
||||
|
||||
dprintf("MemoryManager: Evict(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);
|
||||
assert(AccCache.accLock==0);
|
||||
assert(AccCache.cpuLock==0);
|
||||
if(AccCache.state==AccDirty) {
|
||||
Flush(AccCache);
|
||||
}
|
||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||
if(AccCache.AccPtr) {
|
||||
AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes);
|
||||
DeviceBytes -=AccCache.bytes;
|
||||
LRUremove(AccCache);
|
||||
dprintf("MemoryManager: Free(%llx) footprint now %lld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);
|
||||
}
|
||||
uint64_t CpuPtr = AccCache.CpuPtr;
|
||||
EntryErase(CpuPtr);
|
||||
}
|
||||
void MemoryManager::Flush(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
assert(AccCache.state==AccDirty);
|
||||
assert(AccCache.cpuLock==0);
|
||||
assert(AccCache.accLock==0);
|
||||
assert(AccCache.AccPtr!=(uint64_t)NULL);
|
||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||
acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes);
|
||||
dprintf("MemoryManager: Flush %llx -> %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
||||
DeviceToHostBytes+=AccCache.bytes;
|
||||
DeviceToHostXfer++;
|
||||
AccCache.state=Consistent;
|
||||
}
|
||||
void MemoryManager::Clone(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
assert(AccCache.state==CpuDirty);
|
||||
assert(AccCache.cpuLock==0);
|
||||
assert(AccCache.accLock==0);
|
||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||
if(AccCache.AccPtr==(uint64_t)NULL){
|
||||
AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
|
||||
DeviceBytes+=AccCache.bytes;
|
||||
}
|
||||
dprintf("MemoryManager: Clone %llx <- %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout);
|
||||
acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes);
|
||||
HostToDeviceBytes+=AccCache.bytes;
|
||||
HostToDeviceXfer++;
|
||||
AccCache.state=Consistent;
|
||||
}
|
||||
|
||||
void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache)
|
||||
{
|
||||
assert(AccCache.state!=Empty);
|
||||
assert(AccCache.cpuLock==0);
|
||||
assert(AccCache.accLock==0);
|
||||
assert(AccCache.CpuPtr!=(uint64_t)NULL);
|
||||
if(AccCache.AccPtr==(uint64_t)NULL){
|
||||
AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes);
|
||||
DeviceBytes+=AccCache.bytes;
|
||||
}
|
||||
AccCache.state=AccDirty;
|
||||
}
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
// View management
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
void MemoryManager::ViewClose(void* Ptr,ViewMode mode)
|
||||
{
|
||||
if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
|
||||
AcceleratorViewClose((uint64_t)Ptr);
|
||||
} else if( (mode==CpuRead)||(mode==CpuWrite)){
|
||||
CpuViewClose((uint64_t)Ptr);
|
||||
} else {
|
||||
assert(0);
|
||||
}
|
||||
}
|
||||
void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
|
||||
{
|
||||
uint64_t CpuPtr = (uint64_t)_CpuPtr;
|
||||
if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){
|
||||
return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint);
|
||||
} else if( (mode==CpuRead)||(mode==CpuWrite)){
|
||||
return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint);
|
||||
} else {
|
||||
assert(0);
|
||||
return NULL;
|
||||
}
|
||||
}
|
||||
void MemoryManager::EvictVictims(uint64_t bytes)
|
||||
{
|
||||
while(bytes+DeviceLRUBytes > DeviceMaxBytes){
|
||||
if ( DeviceLRUBytes > 0){
|
||||
assert(LRU.size()>0);
|
||||
uint64_t victim = LRU.back();
|
||||
auto AccCacheIterator = EntryLookup(victim);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
Evict(AccCache);
|
||||
}
|
||||
}
|
||||
}
|
||||
uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint)
|
||||
{
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Find if present, otherwise get or force an empty
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
if ( EntryPresent(CpuPtr)==0 ){
|
||||
EntryCreate(CpuPtr,bytes,mode,hint);
|
||||
}
|
||||
|
||||
auto AccCacheIterator = EntryLookup(CpuPtr);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
if (!AccCache.AccPtr) {
|
||||
EvictVictims(bytes);
|
||||
}
|
||||
assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard));
|
||||
|
||||
assert(AccCache.cpuLock==0); // Programming error
|
||||
|
||||
if(AccCache.state!=Empty) {
|
||||
dprintf("ViewOpen found entry %llx %llx : %lld %lld\n",
|
||||
(uint64_t)AccCache.CpuPtr,
|
||||
(uint64_t)CpuPtr,
|
||||
(uint64_t)AccCache.bytes,
|
||||
(uint64_t)bytes);
|
||||
assert(AccCache.CpuPtr == CpuPtr);
|
||||
assert(AccCache.bytes ==bytes);
|
||||
}
|
||||
/*
|
||||
* State transitions and actions
|
||||
*
|
||||
* Action State StateNext Flush Clone
|
||||
*
|
||||
* AccRead Empty Consistent - Y
|
||||
* AccWrite Empty AccDirty - Y
|
||||
* AccRead CpuDirty Consistent - Y
|
||||
* AccWrite CpuDirty AccDirty - Y
|
||||
* AccRead Consistent Consistent - -
|
||||
* AccWrite Consistent AccDirty - -
|
||||
* AccRead AccDirty AccDirty - -
|
||||
* AccWrite AccDirty AccDirty - -
|
||||
*/
|
||||
if(AccCache.state==Empty) {
|
||||
assert(AccCache.LRU_valid==0);
|
||||
AccCache.CpuPtr = CpuPtr;
|
||||
AccCache.AccPtr = (uint64_t)NULL;
|
||||
AccCache.bytes = bytes;
|
||||
AccCache.state = CpuDirty; // Cpu starts primary
|
||||
if(mode==AcceleratorWriteDiscard){
|
||||
CpuDiscard(AccCache);
|
||||
AccCache.state = AccDirty; // Empty + AcceleratorWrite=> AccDirty
|
||||
} else if(mode==AcceleratorWrite){
|
||||
Clone(AccCache);
|
||||
AccCache.state = AccDirty; // Empty + AcceleratorWrite=> AccDirty
|
||||
} else {
|
||||
Clone(AccCache);
|
||||
AccCache.state = Consistent; // Empty + AccRead => Consistent
|
||||
}
|
||||
AccCache.accLock= 1;
|
||||
} else if(AccCache.state==CpuDirty ){
|
||||
if(mode==AcceleratorWriteDiscard) {
|
||||
CpuDiscard(AccCache);
|
||||
AccCache.state = AccDirty; // CpuDirty + AcceleratorWrite=> AccDirty
|
||||
} else if(mode==AcceleratorWrite) {
|
||||
Clone(AccCache);
|
||||
AccCache.state = AccDirty; // CpuDirty + AcceleratorWrite=> AccDirty
|
||||
} else {
|
||||
Clone(AccCache);
|
||||
AccCache.state = Consistent; // CpuDirty + AccRead => Consistent
|
||||
}
|
||||
AccCache.accLock++;
|
||||
dprintf("Copied CpuDirty entry into device accLock %d\n",AccCache.accLock);
|
||||
} else if(AccCache.state==Consistent) {
|
||||
if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
|
||||
AccCache.state = AccDirty; // Consistent + AcceleratorWrite=> AccDirty
|
||||
else
|
||||
AccCache.state = Consistent; // Consistent + AccRead => Consistent
|
||||
AccCache.accLock++;
|
||||
dprintf("Consistent entry into device accLock %d\n",AccCache.accLock);
|
||||
} else if(AccCache.state==AccDirty) {
|
||||
if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard))
|
||||
AccCache.state = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty
|
||||
else
|
||||
AccCache.state = AccDirty; // AccDirty + AccRead => AccDirty
|
||||
AccCache.accLock++;
|
||||
dprintf("AccDirty entry into device accLock %d\n",AccCache.accLock);
|
||||
} else {
|
||||
assert(0);
|
||||
}
|
||||
|
||||
// If view is opened on device remove from LRU
|
||||
if(AccCache.LRU_valid==1){
|
||||
// must possibly remove from LRU as now locked on GPU
|
||||
LRUremove(AccCache);
|
||||
}
|
||||
|
||||
int transient =hint;
|
||||
AccCache.transient= transient? EvictNext : 0;
|
||||
|
||||
return AccCache.AccPtr;
|
||||
}
|
||||
////////////////////////////////////
|
||||
// look up & decrement lock count
|
||||
////////////////////////////////////
|
||||
void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr)
|
||||
{
|
||||
auto AccCacheIterator = EntryLookup(CpuPtr);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
|
||||
assert(AccCache.cpuLock==0);
|
||||
assert(AccCache.accLock>0);
|
||||
|
||||
AccCache.accLock--;
|
||||
|
||||
// Move to LRU queue if not locked and close on device
|
||||
if(AccCache.accLock==0) {
|
||||
LRUinsert(AccCache);
|
||||
}
|
||||
}
|
||||
void MemoryManager::CpuViewClose(uint64_t CpuPtr)
|
||||
{
|
||||
auto AccCacheIterator = EntryLookup(CpuPtr);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
|
||||
assert(AccCache.cpuLock>0);
|
||||
assert(AccCache.accLock==0);
|
||||
|
||||
AccCache.cpuLock--;
|
||||
}
|
||||
/*
|
||||
* Action State StateNext Flush Clone
|
||||
*
|
||||
* CpuRead Empty CpuDirty - -
|
||||
* CpuWrite Empty CpuDirty - -
|
||||
* CpuRead CpuDirty CpuDirty - -
|
||||
* CpuWrite CpuDirty CpuDirty - -
|
||||
* CpuRead Consistent Consistent - -
|
||||
* CpuWrite Consistent CpuDirty - -
|
||||
* CpuRead AccDirty Consistent Y -
|
||||
* CpuWrite AccDirty CpuDirty Y -
|
||||
*/
|
||||
uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient)
|
||||
{
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Find if present, otherwise get or force an empty
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
if ( EntryPresent(CpuPtr)==0 ){
|
||||
EntryCreate(CpuPtr,bytes,mode,transient);
|
||||
}
|
||||
|
||||
auto AccCacheIterator = EntryLookup(CpuPtr);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
|
||||
if (!AccCache.AccPtr) {
|
||||
EvictVictims(bytes);
|
||||
}
|
||||
|
||||
assert((mode==CpuRead)||(mode==CpuWrite));
|
||||
assert(AccCache.accLock==0); // Programming error
|
||||
|
||||
if(AccCache.state!=Empty) {
|
||||
assert(AccCache.CpuPtr == CpuPtr);
|
||||
assert(AccCache.bytes==bytes);
|
||||
}
|
||||
|
||||
if(AccCache.state==Empty) {
|
||||
AccCache.CpuPtr = CpuPtr;
|
||||
AccCache.AccPtr = (uint64_t)NULL;
|
||||
AccCache.bytes = bytes;
|
||||
AccCache.state = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty
|
||||
AccCache.accLock= 0;
|
||||
AccCache.cpuLock= 1;
|
||||
} else if(AccCache.state==CpuDirty ){
|
||||
// AccPtr dont care, deferred allocate
|
||||
AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty
|
||||
AccCache.cpuLock++;
|
||||
} else if(AccCache.state==Consistent) {
|
||||
assert(AccCache.AccPtr != (uint64_t)NULL);
|
||||
if(mode==CpuWrite)
|
||||
AccCache.state = CpuDirty; // Consistent +CpuWrite => CpuDirty
|
||||
else
|
||||
AccCache.state = Consistent; // Consistent +CpuRead => Consistent
|
||||
AccCache.cpuLock++;
|
||||
} else if(AccCache.state==AccDirty) {
|
||||
assert(AccCache.AccPtr != (uint64_t)NULL);
|
||||
Flush(AccCache);
|
||||
if(mode==CpuWrite) AccCache.state = CpuDirty; // AccDirty +CpuWrite => CpuDirty, Flush
|
||||
else AccCache.state = Consistent; // AccDirty +CpuRead => Consistent, Flush
|
||||
AccCache.cpuLock++;
|
||||
} else {
|
||||
assert(0); // should be unreachable
|
||||
}
|
||||
|
||||
AccCache.transient= transient? EvictNext : 0;
|
||||
|
||||
return AccCache.CpuPtr;
|
||||
}
|
||||
void MemoryManager::NotifyDeletion(void *_ptr)
|
||||
{
|
||||
// Look up in ViewCache
|
||||
uint64_t ptr = (uint64_t)_ptr;
|
||||
if(EntryPresent(ptr)) {
|
||||
auto e = EntryLookup(ptr);
|
||||
AccDiscard(e->second);
|
||||
}
|
||||
}
|
||||
void MemoryManager::Print(void)
|
||||
{
|
||||
std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
|
||||
std::cout << GridLogDebug << "Memory Manager " << std::endl;
|
||||
std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
|
||||
std::cout << GridLogDebug << DeviceBytes << " bytes allocated on device " << std::endl;
|
||||
std::cout << GridLogDebug << DeviceLRUBytes<< " bytes evictable on device " << std::endl;
|
||||
std::cout << GridLogDebug << DeviceMaxBytes<< " bytes max on device " << std::endl;
|
||||
std::cout << GridLogDebug << HostToDeviceXfer << " transfers to device " << std::endl;
|
||||
std::cout << GridLogDebug << DeviceToHostXfer << " transfers from device " << std::endl;
|
||||
std::cout << GridLogDebug << HostToDeviceBytes<< " bytes transfered to device " << std::endl;
|
||||
std::cout << GridLogDebug << DeviceToHostBytes<< " bytes transfered from device " << std::endl;
|
||||
std::cout << GridLogDebug << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl;
|
||||
std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
|
||||
std::cout << GridLogDebug << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl;
|
||||
std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
|
||||
for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){
|
||||
auto &AccCache = it->second;
|
||||
|
||||
std::string str;
|
||||
if ( AccCache.state==Empty ) str = std::string("Empty");
|
||||
if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty");
|
||||
if ( AccCache.state==AccDirty ) str = std::string("AccDirty");
|
||||
if ( AccCache.state==Consistent)str = std::string("Consistent");
|
||||
|
||||
std::cout << GridLogDebug << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec
|
||||
<< "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str
|
||||
<< "\t" << AccCache.cpuLock
|
||||
<< "\t" << AccCache.accLock
|
||||
<< "\t" << AccCache.LRU_valid<<std::endl;
|
||||
}
|
||||
std::cout << GridLogDebug << "--------------------------------------------" << std::endl;
|
||||
|
||||
};
|
||||
int MemoryManager::isOpen (void* _CpuPtr)
|
||||
{
|
||||
uint64_t CpuPtr = (uint64_t)_CpuPtr;
|
||||
if ( EntryPresent(CpuPtr) ){
|
||||
auto AccCacheIterator = EntryLookup(CpuPtr);
|
||||
auto & AccCache = AccCacheIterator->second;
|
||||
return AccCache.cpuLock+AccCache.accLock;
|
||||
} else {
|
||||
return 0;
|
||||
}
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
23
Grid/allocator/MemoryManagerShared.cc
Normal file
23
Grid/allocator/MemoryManagerShared.cc
Normal file
@ -0,0 +1,23 @@
|
||||
#include <Grid/GridCore.h>
|
||||
#ifdef GRID_UVM
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
// View management is 1:1 address space mapping
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
uint64_t MemoryManager::DeviceBytes;
|
||||
uint64_t MemoryManager::DeviceLRUBytes;
|
||||
uint64_t MemoryManager::DeviceMaxBytes = 1024*1024*128;
|
||||
uint64_t MemoryManager::HostToDeviceBytes;
|
||||
uint64_t MemoryManager::DeviceToHostBytes;
|
||||
uint64_t MemoryManager::HostToDeviceXfer;
|
||||
uint64_t MemoryManager::DeviceToHostXfer;
|
||||
|
||||
void MemoryManager::ViewClose(void* AccPtr,ViewMode mode){};
|
||||
void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; };
|
||||
int MemoryManager::isOpen (void* CpuPtr) { return 0;}
|
||||
void MemoryManager::Print(void){};
|
||||
void MemoryManager::NotifyDeletion(void *ptr){};
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
#endif
|
@ -6,72 +6,6 @@ NAMESPACE_BEGIN(Grid);
|
||||
MemoryStats *MemoryProfiler::stats = nullptr;
|
||||
bool MemoryProfiler::debug = false;
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
#define SMALL_LIMIT (0)
|
||||
#else
|
||||
#define SMALL_LIMIT (4096)
|
||||
#endif
|
||||
|
||||
#ifdef POINTER_CACHE
|
||||
int PointerCache::victim;
|
||||
|
||||
PointerCache::PointerCacheEntry PointerCache::Entries[PointerCache::Ncache];
|
||||
|
||||
void *PointerCache::Insert(void *ptr,size_t bytes) {
|
||||
|
||||
if (bytes < SMALL_LIMIT ) return ptr;
|
||||
|
||||
#ifdef GRID_OMP
|
||||
assert(omp_in_parallel()==0);
|
||||
#endif
|
||||
|
||||
void * ret = NULL;
|
||||
int v = -1;
|
||||
|
||||
for(int e=0;e<Ncache;e++) {
|
||||
if ( Entries[e].valid==0 ) {
|
||||
v=e;
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
if ( v==-1 ) {
|
||||
v=victim;
|
||||
victim = (victim+1)%Ncache;
|
||||
}
|
||||
|
||||
if ( Entries[v].valid ) {
|
||||
ret = Entries[v].address;
|
||||
Entries[v].valid = 0;
|
||||
Entries[v].address = NULL;
|
||||
Entries[v].bytes = 0;
|
||||
}
|
||||
|
||||
Entries[v].address=ptr;
|
||||
Entries[v].bytes =bytes;
|
||||
Entries[v].valid =1;
|
||||
|
||||
return ret;
|
||||
}
|
||||
|
||||
void *PointerCache::Lookup(size_t bytes) {
|
||||
|
||||
if (bytes < SMALL_LIMIT ) return NULL;
|
||||
|
||||
#ifdef GRID_OMP
|
||||
assert(omp_in_parallel()==0);
|
||||
#endif
|
||||
|
||||
for(int e=0;e<Ncache;e++){
|
||||
if ( Entries[e].valid && ( Entries[e].bytes == bytes ) ) {
|
||||
Entries[e].valid = 0;
|
||||
return Entries[e].address;
|
||||
}
|
||||
}
|
||||
return NULL;
|
||||
}
|
||||
#endif
|
||||
|
||||
void check_huge_pages(void *Buf,uint64_t BYTES)
|
||||
{
|
||||
#ifdef __linux__
|
95
Grid/allocator/MemoryStats.h
Normal file
95
Grid/allocator/MemoryStats.h
Normal file
@ -0,0 +1,95 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/MemoryStats.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#pragma once
|
||||
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
std::string sizeString(size_t bytes);
|
||||
|
||||
struct MemoryStats
|
||||
{
|
||||
size_t totalAllocated{0}, maxAllocated{0},
|
||||
currentlyAllocated{0}, totalFreed{0};
|
||||
};
|
||||
|
||||
class MemoryProfiler
|
||||
{
|
||||
public:
|
||||
static MemoryStats *stats;
|
||||
static bool debug;
|
||||
};
|
||||
|
||||
#define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")"
|
||||
#define profilerDebugPrint \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] total : " << memString(s->totalAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] max : " << memString(s->maxAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \
|
||||
<< std::endl; \
|
||||
std::cout << GridLogDebug << "[Memory debug] freed : " << memString(s->totalFreed) \
|
||||
<< std::endl; \
|
||||
}
|
||||
|
||||
#define profilerAllocate(bytes) \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
s->totalAllocated += (bytes); \
|
||||
s->currentlyAllocated += (bytes); \
|
||||
s->maxAllocated = std::max(s->maxAllocated, s->currentlyAllocated); \
|
||||
} \
|
||||
if (MemoryProfiler::debug) \
|
||||
{ \
|
||||
std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \
|
||||
profilerDebugPrint; \
|
||||
}
|
||||
|
||||
#define profilerFree(bytes) \
|
||||
if (MemoryProfiler::stats) \
|
||||
{ \
|
||||
auto s = MemoryProfiler::stats; \
|
||||
s->totalFreed += (bytes); \
|
||||
s->currentlyAllocated -= (bytes); \
|
||||
} \
|
||||
if (MemoryProfiler::debug) \
|
||||
{ \
|
||||
std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \
|
||||
profilerDebugPrint; \
|
||||
}
|
||||
|
||||
void check_huge_pages(void *Buf,uint64_t BYTES);
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
@ -81,6 +81,7 @@ public:
|
||||
|
||||
bool _isCheckerBoarded;
|
||||
int LocallyPeriodic;
|
||||
Coordinate _checker_dim_mask;
|
||||
|
||||
public:
|
||||
|
||||
|
@ -38,6 +38,7 @@ class GridCartesian: public GridBase {
|
||||
|
||||
public:
|
||||
int dummy;
|
||||
Coordinate _checker_dim_mask;
|
||||
virtual int CheckerBoardFromOindexTable (int Oindex) {
|
||||
return 0;
|
||||
}
|
||||
@ -104,6 +105,7 @@ public:
|
||||
_ldimensions.resize(_ndimension);
|
||||
_rdimensions.resize(_ndimension);
|
||||
_simd_layout.resize(_ndimension);
|
||||
_checker_dim_mask.resize(_ndimension);;
|
||||
_lstart.resize(_ndimension);
|
||||
_lend.resize(_ndimension);
|
||||
|
||||
@ -114,6 +116,8 @@ public:
|
||||
|
||||
for (int d = 0; d < _ndimension; d++)
|
||||
{
|
||||
_checker_dim_mask[d]=0;
|
||||
|
||||
_fdimensions[d] = dimensions[d]; // Global dimensions
|
||||
_gdimensions[d] = _fdimensions[d]; // Global dimensions
|
||||
_simd_layout[d] = simd_layout[d];
|
||||
|
@ -35,12 +35,28 @@ static const int CbRed =0;
|
||||
static const int CbBlack=1;
|
||||
static const int Even =CbRed;
|
||||
static const int Odd =CbBlack;
|
||||
|
||||
accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex,const Coordinate &rdim,const Coordinate &chk_dim_msk)
|
||||
{
|
||||
int nd=rdim.size();
|
||||
Coordinate coor(nd);
|
||||
|
||||
Lexicographic::CoorFromIndex(coor,oindex,rdim);
|
||||
|
||||
int linear=0;
|
||||
for(int d=0;d<nd;d++){
|
||||
if(chk_dim_msk[d])
|
||||
linear=linear+coor[d];
|
||||
}
|
||||
return (linear&0x1);
|
||||
}
|
||||
|
||||
|
||||
// Specialise this for red black grids storing half the data like a chess board.
|
||||
class GridRedBlackCartesian : public GridBase
|
||||
{
|
||||
public:
|
||||
Coordinate _checker_dim_mask;
|
||||
// Coordinate _checker_dim_mask;
|
||||
int _checker_dim;
|
||||
std::vector<int> _checker_board;
|
||||
|
||||
|
@ -1,4 +1,3 @@
|
||||
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
@ -108,12 +107,15 @@ public:
|
||||
////////////////////////////////////////////////////////////
|
||||
// Reduction
|
||||
////////////////////////////////////////////////////////////
|
||||
void GlobalMax(RealD &);
|
||||
void GlobalMax(RealF &);
|
||||
void GlobalSum(RealF &);
|
||||
void GlobalSumVector(RealF *,int N);
|
||||
void GlobalSum(RealD &);
|
||||
void GlobalSumVector(RealD *,int N);
|
||||
void GlobalSum(uint32_t &);
|
||||
void GlobalSum(uint64_t &);
|
||||
void GlobalSumVector(uint64_t*,int N);
|
||||
void GlobalSum(ComplexF &c);
|
||||
void GlobalSumVector(ComplexF *c,int N);
|
||||
void GlobalSum(ComplexD &c);
|
||||
@ -137,21 +139,6 @@ public:
|
||||
int recv_from_rank,
|
||||
int bytes);
|
||||
|
||||
void SendRecvPacket(void *xmit,
|
||||
void *recv,
|
||||
int xmit_to_rank,
|
||||
int recv_from_rank,
|
||||
int bytes);
|
||||
|
||||
void SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||
void *xmit,
|
||||
int xmit_to_rank,
|
||||
void *recv,
|
||||
int recv_from_rank,
|
||||
int bytes);
|
||||
|
||||
void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall);
|
||||
|
||||
double StencilSendToRecvFrom(void *xmit,
|
||||
int xmit_to_rank,
|
||||
void *recv,
|
||||
|
@ -1,6 +1,6 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/communicator/Communicator_mpi.cc
|
||||
|
||||
@ -35,7 +35,7 @@ Grid_MPI_Comm CartesianCommunicator::communicator_world;
|
||||
////////////////////////////////////////////
|
||||
// First initialise of comms system
|
||||
////////////////////////////////////////////
|
||||
void CartesianCommunicator::Init(int *argc, char ***argv)
|
||||
void CartesianCommunicator::Init(int *argc, char ***argv)
|
||||
{
|
||||
|
||||
int flag;
|
||||
@ -43,8 +43,16 @@ void CartesianCommunicator::Init(int *argc, char ***argv)
|
||||
|
||||
MPI_Initialized(&flag); // needed to coexist with other libs apparently
|
||||
if ( !flag ) {
|
||||
MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided);
|
||||
|
||||
#ifndef GRID_COMMS_THREADS
|
||||
nCommThreads=1;
|
||||
// wrong results here too
|
||||
// For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs
|
||||
// other comms schemes are ok
|
||||
MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided);
|
||||
#else
|
||||
MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided);
|
||||
#endif
|
||||
//If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE
|
||||
if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) {
|
||||
assert(0);
|
||||
@ -91,7 +99,7 @@ void CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor)
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Initialises from communicator_world
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
|
||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
|
||||
{
|
||||
MPI_Comm optimal_comm;
|
||||
////////////////////////////////////////////////////
|
||||
@ -110,7 +118,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
|
||||
//////////////////////////////////
|
||||
// Try to subdivide communicator
|
||||
//////////////////////////////////
|
||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)
|
||||
CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)
|
||||
{
|
||||
_ndimension = processors.size(); assert(_ndimension>=1);
|
||||
int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension);
|
||||
@ -127,7 +135,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
|
||||
//////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// split the communicator
|
||||
//////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// int Nparent = parent._processors ;
|
||||
// int Nparent = parent._processors ;
|
||||
int Nparent;
|
||||
MPI_Comm_size(parent.communicator,&Nparent);
|
||||
|
||||
@ -149,13 +157,13 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
|
||||
}
|
||||
|
||||
// rank within subcomm ; srank is rank of subcomm within blocks of subcomms
|
||||
int crank;
|
||||
int crank;
|
||||
// Mpi uses the reverse Lexico convention to us; so reversed routines called
|
||||
Lexicographic::IndexFromCoorReversed(ccoor,crank,processors); // processors is the split grid dimensions
|
||||
Lexicographic::IndexFromCoorReversed(scoor,srank,ssize); // ssize is the number of split grids
|
||||
|
||||
MPI_Comm comm_split;
|
||||
if ( Nchild > 1 ) {
|
||||
if ( Nchild > 1 ) {
|
||||
|
||||
////////////////////////////////////////////////////////////////
|
||||
// Split the communicator
|
||||
@ -180,11 +188,11 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const
|
||||
SetCommunicator(comm_split);
|
||||
|
||||
///////////////////////////////////////////////
|
||||
// Free the temp communicator
|
||||
// Free the temp communicator
|
||||
///////////////////////////////////////////////
|
||||
MPI_Comm_free(&comm_split);
|
||||
|
||||
if(0){
|
||||
if(0){
|
||||
std::cout << " ndim " <<_ndimension<<" " << parent._ndimension << std::endl;
|
||||
for(int d=0;d<processors.size();d++){
|
||||
std::cout << d<< " " << _processor_coor[d] <<" " << ccoor[d]<<std::endl;
|
||||
@ -245,7 +253,7 @@ CartesianCommunicator::~CartesianCommunicator()
|
||||
for(int i=0;i<communicator_halo.size();i++){
|
||||
MPI_Comm_free(&communicator_halo[i]);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
void CartesianCommunicator::GlobalSum(uint32_t &u){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_SUM,communicator);
|
||||
@ -255,6 +263,10 @@ void CartesianCommunicator::GlobalSum(uint64_t &u){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
void CartesianCommunicator::GlobalXOR(uint32_t &u){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator);
|
||||
assert(ierr==0);
|
||||
@ -263,6 +275,16 @@ void CartesianCommunicator::GlobalXOR(uint64_t &u){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_BXOR,communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
void CartesianCommunicator::GlobalMax(float &f)
|
||||
{
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_MAX,communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
void CartesianCommunicator::GlobalMax(double &d)
|
||||
{
|
||||
int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_MAX,communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
void CartesianCommunicator::GlobalSum(float &f){
|
||||
int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator);
|
||||
assert(ierr==0);
|
||||
@ -290,60 +312,28 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
||||
int bytes)
|
||||
{
|
||||
std::vector<CommsRequest_t> reqs(0);
|
||||
// unsigned long xcrc = crc32(0L, Z_NULL, 0);
|
||||
// unsigned long rcrc = crc32(0L, Z_NULL, 0);
|
||||
// xcrc = crc32(xcrc,(unsigned char *)xmit,bytes);
|
||||
SendToRecvFromBegin(reqs,xmit,dest,recv,from,bytes);
|
||||
SendToRecvFromComplete(reqs);
|
||||
// rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
|
||||
// printf("proc %d SendToRecvFrom %d bytes %lx %lx\n",_processor,bytes,xcrc,rcrc);
|
||||
}
|
||||
void CartesianCommunicator::SendRecvPacket(void *xmit,
|
||||
void *recv,
|
||||
int sender,
|
||||
int receiver,
|
||||
int bytes)
|
||||
{
|
||||
MPI_Status stat;
|
||||
assert(sender != receiver);
|
||||
int tag = sender;
|
||||
if ( _processor == sender ) {
|
||||
MPI_Send(xmit, bytes, MPI_CHAR,receiver,tag,communicator);
|
||||
}
|
||||
if ( _processor == receiver ) {
|
||||
MPI_Recv(recv, bytes, MPI_CHAR,sender,tag,communicator,&stat);
|
||||
}
|
||||
}
|
||||
// Basic Halo comms primitive
|
||||
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||
void *xmit,
|
||||
int dest,
|
||||
void *recv,
|
||||
int from,
|
||||
int bytes)
|
||||
{
|
||||
unsigned long xcrc = crc32(0L, Z_NULL, 0);
|
||||
unsigned long rcrc = crc32(0L, Z_NULL, 0);
|
||||
|
||||
int myrank = _processor;
|
||||
int ierr;
|
||||
|
||||
if ( CommunicatorPolicy == CommunicatorPolicyConcurrent ) {
|
||||
MPI_Request xrq;
|
||||
MPI_Request rrq;
|
||||
// Enforce no UVM in comms, device or host OK
|
||||
assert(acceleratorIsCommunicable(xmit));
|
||||
assert(acceleratorIsCommunicable(recv));
|
||||
|
||||
ierr =MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator,&rrq);
|
||||
ierr|=MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator,&xrq);
|
||||
|
||||
assert(ierr==0);
|
||||
list.push_back(xrq);
|
||||
list.push_back(rrq);
|
||||
} else {
|
||||
// Give the CPU to MPI immediately; can use threads to overlap optionally
|
||||
ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank,
|
||||
recv,bytes,MPI_CHAR,from, from,
|
||||
communicator,MPI_STATUS_IGNORE);
|
||||
assert(ierr==0);
|
||||
}
|
||||
// Give the CPU to MPI immediately; can use threads to overlap optionally
|
||||
// printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes);
|
||||
ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank,
|
||||
recv,bytes,MPI_CHAR,from, from,
|
||||
communicator,MPI_STATUS_IGNORE);
|
||||
assert(ierr==0);
|
||||
|
||||
// xcrc = crc32(xcrc,(unsigned char *)xmit,bytes);
|
||||
// rcrc = crc32(rcrc,(unsigned char *)recv,bytes);
|
||||
// printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush
|
||||
}
|
||||
|
||||
// Basic Halo comms primitive
|
||||
double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
|
||||
int dest,
|
||||
void *recv,
|
||||
@ -363,7 +353,7 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
|
||||
int from,
|
||||
int bytes,int dir)
|
||||
{
|
||||
int ncomm =communicator_halo.size();
|
||||
int ncomm =communicator_halo.size();
|
||||
int commdir=dir%ncomm;
|
||||
|
||||
MPI_Request xrq;
|
||||
@ -378,36 +368,31 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
|
||||
assert(from != _processor);
|
||||
assert(gme == ShmRank);
|
||||
double off_node_bytes=0.0;
|
||||
int tag;
|
||||
|
||||
if ( gfrom ==MPI_UNDEFINED) {
|
||||
ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator_halo[commdir],&rrq);
|
||||
tag= dir+from*32;
|
||||
ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq);
|
||||
assert(ierr==0);
|
||||
list.push_back(rrq);
|
||||
off_node_bytes+=bytes;
|
||||
}
|
||||
|
||||
if ( gdest == MPI_UNDEFINED ) {
|
||||
ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator_halo[commdir],&xrq);
|
||||
tag= dir+_processor*32;
|
||||
ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq);
|
||||
assert(ierr==0);
|
||||
list.push_back(xrq);
|
||||
off_node_bytes+=bytes;
|
||||
}
|
||||
|
||||
if ( CommunicatorPolicy == CommunicatorPolicySequential ) {
|
||||
if ( CommunicatorPolicy == CommunicatorPolicySequential ) {
|
||||
this->StencilSendToRecvFromComplete(list,dir);
|
||||
}
|
||||
|
||||
return off_node_bytes;
|
||||
}
|
||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir)
|
||||
{
|
||||
SendToRecvFromComplete(waitall);
|
||||
}
|
||||
void CartesianCommunicator::StencilBarrier(void)
|
||||
{
|
||||
MPI_Barrier (ShmComm);
|
||||
}
|
||||
void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
|
||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir)
|
||||
{
|
||||
int nreq=list.size();
|
||||
|
||||
@ -418,6 +403,13 @@ void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &
|
||||
assert(ierr==0);
|
||||
list.resize(0);
|
||||
}
|
||||
void CartesianCommunicator::StencilBarrier(void)
|
||||
{
|
||||
MPI_Barrier (ShmComm);
|
||||
}
|
||||
//void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
|
||||
//{
|
||||
//}
|
||||
void CartesianCommunicator::Barrier(void)
|
||||
{
|
||||
int ierr = MPI_Barrier(communicator);
|
||||
@ -432,8 +424,8 @@ void CartesianCommunicator::Broadcast(int root,void* data, int bytes)
|
||||
communicator);
|
||||
assert(ierr==0);
|
||||
}
|
||||
int CartesianCommunicator::RankWorld(void){
|
||||
int r;
|
||||
int CartesianCommunicator::RankWorld(void){
|
||||
int r;
|
||||
MPI_Comm_rank(communicator_world,&r);
|
||||
return r;
|
||||
}
|
||||
@ -466,7 +458,7 @@ void CartesianCommunicator::AllToAll(void *in,void *out,uint64_t words,uint64_t
|
||||
// When 24*4 bytes multiples get 50x 10^9 >>> 2x10^9 Y2K bug.
|
||||
// (Turns up on 32^3 x 64 Gparity too)
|
||||
MPI_Datatype object;
|
||||
int iwords;
|
||||
int iwords;
|
||||
int ibytes;
|
||||
iwords = words;
|
||||
ibytes = bytes;
|
||||
@ -479,5 +471,3 @@ void CartesianCommunicator::AllToAll(void *in,void *out,uint64_t words,uint64_t
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
|
||||
|
@ -67,24 +67,18 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors)
|
||||
|
||||
CartesianCommunicator::~CartesianCommunicator(){}
|
||||
|
||||
void CartesianCommunicator::GlobalMax(float &){}
|
||||
void CartesianCommunicator::GlobalMax(double &){}
|
||||
void CartesianCommunicator::GlobalSum(float &){}
|
||||
void CartesianCommunicator::GlobalSumVector(float *,int N){}
|
||||
void CartesianCommunicator::GlobalSum(double &){}
|
||||
void CartesianCommunicator::GlobalSumVector(double *,int N){}
|
||||
void CartesianCommunicator::GlobalSum(uint32_t &){}
|
||||
void CartesianCommunicator::GlobalSum(uint64_t &){}
|
||||
void CartesianCommunicator::GlobalSumVector(double *,int N){}
|
||||
void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){}
|
||||
void CartesianCommunicator::GlobalXOR(uint32_t &){}
|
||||
void CartesianCommunicator::GlobalXOR(uint64_t &){}
|
||||
|
||||
void CartesianCommunicator::SendRecvPacket(void *xmit,
|
||||
void *recv,
|
||||
int xmit_to_rank,
|
||||
int recv_from_rank,
|
||||
int bytes)
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
|
||||
|
||||
// Basic Halo comms primitive -- should never call in single node
|
||||
void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
||||
@ -95,20 +89,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit,
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||
void *xmit,
|
||||
int dest,
|
||||
void *recv,
|
||||
int from,
|
||||
int bytes)
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
|
||||
void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list)
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
void CartesianCommunicator::AllToAll(int dim,void *in,void *out,uint64_t words,uint64_t bytes)
|
||||
{
|
||||
bcopy(in,out,bytes*words);
|
||||
@ -136,10 +116,6 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit,
|
||||
int recv_from_rank,
|
||||
int bytes, int dir)
|
||||
{
|
||||
std::vector<CommsRequest_t> list;
|
||||
// Discard the "dir"
|
||||
SendToRecvFromBegin (list,xmit,xmit_to_rank,recv,recv_from_rank,bytes);
|
||||
SendToRecvFromComplete(list);
|
||||
return 2.0*bytes;
|
||||
}
|
||||
double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list,
|
||||
@ -149,13 +125,10 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques
|
||||
int recv_from_rank,
|
||||
int bytes, int dir)
|
||||
{
|
||||
// Discard the "dir"
|
||||
SendToRecvFromBegin(list,xmit,xmit_to_rank,recv,recv_from_rank,bytes);
|
||||
return 2.0*bytes;
|
||||
}
|
||||
void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir)
|
||||
{
|
||||
SendToRecvFromComplete(waitall);
|
||||
}
|
||||
|
||||
void CartesianCommunicator::StencilBarrier(void){};
|
||||
|
@ -74,7 +74,9 @@ void *SharedMemory::ShmBufferMalloc(size_t bytes){
|
||||
if (heap_bytes >= heap_size) {
|
||||
std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl;
|
||||
std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl;
|
||||
std::cout<< " Current value is " << (heap_size/(1024*1024)) <<std::endl;
|
||||
std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl;
|
||||
std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl;
|
||||
std::cout<< " Current heap is " << (heap_size/(1024*1024)) <<"MB"<<std::endl;
|
||||
assert(heap_bytes<heap_size);
|
||||
}
|
||||
//std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl;
|
||||
|
@ -102,7 +102,7 @@ public:
|
||||
///////////////////////////////////////////////////
|
||||
static void SharedMemoryAllocate(uint64_t bytes, int flags);
|
||||
static void SharedMemoryFree(void);
|
||||
static void SharedMemoryCopy(void *dest,const void *src,size_t bytes);
|
||||
static void SharedMemoryCopy(void *dest,void *src,size_t bytes);
|
||||
static void SharedMemoryZero(void *dest,size_t bytes);
|
||||
|
||||
};
|
||||
|
@ -7,6 +7,7 @@
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
@ -29,9 +30,12 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/GridCore.h>
|
||||
#include <pwd.h>
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
#ifdef GRID_CUDA
|
||||
#include <cuda_runtime_api.h>
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
#include <hip/hip_runtime_api.h>
|
||||
#endif
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
#define header "SharedMemoryMpi: "
|
||||
@ -47,7 +51,12 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm)
|
||||
/////////////////////////////////////////////////////////////////////
|
||||
// Split into groups that can share memory
|
||||
/////////////////////////////////////////////////////////////////////
|
||||
#ifndef GRID_MPI3_SHM_NONE
|
||||
MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm);
|
||||
#else
|
||||
MPI_Comm_split(comm, WorldRank, 0, &WorldShmComm);
|
||||
#endif
|
||||
|
||||
MPI_Comm_rank(WorldShmComm ,&WorldShmRank);
|
||||
MPI_Comm_size(WorldShmComm ,&WorldShmSize);
|
||||
|
||||
@ -161,6 +170,23 @@ static inline int divides(int a,int b)
|
||||
}
|
||||
void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims)
|
||||
{
|
||||
////////////////////////////////////////////////////////////////
|
||||
// Allow user to configure through environment variable
|
||||
////////////////////////////////////////////////////////////////
|
||||
char* str = getenv(("GRID_SHM_DIMS_" + std::to_string(ShmDims.size())).c_str());
|
||||
if ( str ) {
|
||||
std::vector<int> IntShmDims;
|
||||
GridCmdOptionIntVector(std::string(str),IntShmDims);
|
||||
assert(IntShmDims.size() == WorldDims.size());
|
||||
long ShmSize = 1;
|
||||
for (int dim=0;dim<WorldDims.size();dim++) {
|
||||
ShmSize *= (ShmDims[dim] = IntShmDims[dim]);
|
||||
assert(divides(ShmDims[dim],WorldDims[dim]));
|
||||
}
|
||||
assert(ShmSize == WorldShmSize);
|
||||
return;
|
||||
}
|
||||
|
||||
////////////////////////////////////////////////////////////////
|
||||
// Powers of 2,3,5 only in prime decomposition for now
|
||||
////////////////////////////////////////////////////////////////
|
||||
@ -170,17 +196,24 @@ void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmD
|
||||
std::vector<int> primes({2,3,5});
|
||||
|
||||
int dim = 0;
|
||||
int last_dim = ndimension - 1;
|
||||
int AutoShmSize = 1;
|
||||
while(AutoShmSize != WorldShmSize) {
|
||||
for(int p=0;p<primes.size();p++) {
|
||||
int p;
|
||||
for(p=0;p<primes.size();p++) {
|
||||
int prime=primes[p];
|
||||
if ( divides(prime,WorldDims[dim]/ShmDims[dim])
|
||||
&& divides(prime,WorldShmSize/AutoShmSize) ) {
|
||||
AutoShmSize*=prime;
|
||||
ShmDims[dim]*=prime;
|
||||
last_dim = dim;
|
||||
break;
|
||||
}
|
||||
}
|
||||
if (p == primes.size() && last_dim == dim) {
|
||||
std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
dim=(dim+1) %ndimension;
|
||||
}
|
||||
}
|
||||
@ -413,7 +446,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Hugetlbfs mapping intended
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
#ifdef GRID_NVCC
|
||||
#if defined(GRID_CUDA) ||defined(GRID_HIP)
|
||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
{
|
||||
void * ShmCommBuf ;
|
||||
@ -433,27 +466,19 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
//////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2);
|
||||
|
||||
#ifdef GRID_IBM_SUMMIT
|
||||
// IBM Jsrun makes cuda Device numbering screwy and not match rank
|
||||
std::cout << "IBM Summit or similar - NOT setting device to WorldShmRank"<<std::endl;
|
||||
#else
|
||||
std::cout << "setting device to WorldShmRank"<<std::endl;
|
||||
cudaSetDevice(WorldShmRank);
|
||||
#endif
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Each MPI rank should allocate our own buffer
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
auto err = cudaMalloc(&ShmCommBuf, bytes);
|
||||
if ( err != cudaSuccess) {
|
||||
std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
ShmCommBuf = acceleratorAllocDevice(bytes);
|
||||
|
||||
if (ShmCommBuf == (void *)NULL ) {
|
||||
std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed NULL pointer for " << bytes<<" bytes " << std::endl;
|
||||
std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
if ( WorldRank == 0 ){
|
||||
std::cout << header " SharedMemoryMPI.cc cudaMalloc "<< bytes << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
|
||||
// if ( WorldRank == 0 ){
|
||||
if ( 1 ){
|
||||
std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes
|
||||
<< "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
|
||||
}
|
||||
SharedMemoryZero(ShmCommBuf,bytes);
|
||||
|
||||
@ -461,19 +486,31 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
// Loop over ranks/gpu's on our node
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
for(int r=0;r<WorldShmSize;r++){
|
||||
|
||||
|
||||
#ifndef GRID_MPI3_SHM_NONE
|
||||
//////////////////////////////////////////////////
|
||||
// If it is me, pass around the IPC access key
|
||||
//////////////////////////////////////////////////
|
||||
#ifdef GRID_CUDA
|
||||
cudaIpcMemHandle_t handle;
|
||||
|
||||
if ( r==WorldShmRank ) {
|
||||
err = cudaIpcGetMemHandle(&handle,ShmCommBuf);
|
||||
auto err = cudaIpcGetMemHandle(&handle,ShmCommBuf);
|
||||
if ( err != cudaSuccess) {
|
||||
std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
}
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
hipIpcMemHandle_t handle;
|
||||
if ( r==WorldShmRank ) {
|
||||
auto err = hipIpcGetMemHandle(&handle,ShmCommBuf);
|
||||
if ( err != hipSuccess) {
|
||||
std::cerr << " SharedMemoryMPI.cc hipIpcGetMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
}
|
||||
#endif
|
||||
//////////////////////////////////////////////////
|
||||
// Share this IPC handle across the Shm Comm
|
||||
//////////////////////////////////////////////////
|
||||
@ -490,17 +527,31 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
// If I am not the source, overwrite thisBuf with remote buffer
|
||||
///////////////////////////////////////////////////////////////
|
||||
void * thisBuf = ShmCommBuf;
|
||||
#ifdef GRID_CUDA
|
||||
if ( r!=WorldShmRank ) {
|
||||
err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess);
|
||||
auto err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess);
|
||||
if ( err != cudaSuccess) {
|
||||
std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
}
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
if ( r!=WorldShmRank ) {
|
||||
auto err = hipIpcOpenMemHandle(&thisBuf,handle,hipIpcMemLazyEnablePeerAccess);
|
||||
if ( err != hipSuccess) {
|
||||
std::cerr << " SharedMemoryMPI.cc hipIpcOpenMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
}
|
||||
#endif
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Save a copy of the device buffers
|
||||
///////////////////////////////////////////////////////////////
|
||||
WorldShmCommBufs[r] = thisBuf;
|
||||
#else
|
||||
WorldShmCommBufs[r] = ShmCommBuf;
|
||||
#endif
|
||||
}
|
||||
|
||||
_ShmAllocBytes=bytes;
|
||||
@ -633,7 +684,6 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
#endif
|
||||
void * ptr = mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0);
|
||||
|
||||
// std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< size<< "bytes)"<<std::endl;
|
||||
if ( ptr == (void * )MAP_FAILED ) {
|
||||
perror("failed mmap");
|
||||
assert(0);
|
||||
@ -677,15 +727,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
/////////////////////////////////////////////////////////////////////////
|
||||
void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
|
||||
{
|
||||
#ifdef GRID_NVCC
|
||||
#ifdef GRID_CUDA
|
||||
cudaMemset(dest,0,bytes);
|
||||
#else
|
||||
bzero(dest,bytes);
|
||||
#endif
|
||||
}
|
||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,const void *src,size_t bytes)
|
||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
|
||||
{
|
||||
#ifdef GRID_NVCC
|
||||
#ifdef GRID_CUDA
|
||||
cudaMemcpy(dest,src,bytes,cudaMemcpyDefault);
|
||||
#else
|
||||
bcopy(src,dest,bytes);
|
||||
@ -705,7 +755,11 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
|
||||
/////////////////////////////////////////////////////////////////////
|
||||
// Split into groups that can share memory
|
||||
/////////////////////////////////////////////////////////////////////
|
||||
#ifndef GRID_MPI3_SHM_NONE
|
||||
MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm);
|
||||
#else
|
||||
MPI_Comm_split(comm, rank, 0, &ShmComm);
|
||||
#endif
|
||||
MPI_Comm_rank(ShmComm ,&ShmRank);
|
||||
MPI_Comm_size(ShmComm ,&ShmSize);
|
||||
ShmCommBufs.resize(ShmSize);
|
||||
@ -735,19 +789,12 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm)
|
||||
std::vector<int> ranks(size); for(int r=0;r<size;r++) ranks[r]=r;
|
||||
MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);
|
||||
|
||||
#ifdef GRID_IBM_SUMMIT
|
||||
// Hide the shared memory path between sockets
|
||||
// if even number of nodes
|
||||
if ( (ShmSize & 0x1)==0 ) {
|
||||
int SocketSize = ShmSize/2;
|
||||
int mySocket = ShmRank/SocketSize;
|
||||
#ifdef GRID_SHM_FORCE_MPI
|
||||
// Hide the shared memory path between ranks
|
||||
{
|
||||
for(int r=0;r<size;r++){
|
||||
int hisRank=ShmRanks[r];
|
||||
if ( hisRank!= MPI_UNDEFINED ) {
|
||||
int hisSocket=hisRank/SocketSize;
|
||||
if ( hisSocket != mySocket ) {
|
||||
ShmRanks[r] = MPI_UNDEFINED;
|
||||
}
|
||||
if ( r!=rank ) {
|
||||
ShmRanks[r] = MPI_UNDEFINED;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
@ -29,6 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/GridCore.h>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
#define header "SharedMemoryNone: "
|
||||
|
||||
/*Construct from an MPI communicator*/
|
||||
void GlobalSharedMemory::Init(Grid_MPI_Comm comm)
|
||||
@ -55,6 +56,38 @@ void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_M
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Hugetlbfs mapping intended, use anonymous mmap
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
#if 1
|
||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
{
|
||||
std::cout << header "SharedMemoryAllocate "<< bytes<< " GPU implementation "<<std::endl;
|
||||
void * ShmCommBuf ;
|
||||
assert(_ShmSetup==1);
|
||||
assert(_ShmAlloc==0);
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Each MPI rank should allocate our own buffer
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
ShmCommBuf = acceleratorAllocDevice(bytes);
|
||||
|
||||
if (ShmCommBuf == (void *)NULL ) {
|
||||
std::cerr << " SharedMemoryNone.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
if ( WorldRank == 0 ){
|
||||
std::cout << WorldRank << header " SharedMemoryNone.cc acceleratorAllocDevice "<< bytes
|
||||
<< "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl;
|
||||
}
|
||||
SharedMemoryZero(ShmCommBuf,bytes);
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Loop over ranks/gpu's on our node
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
WorldShmCommBufs[0] = ShmCommBuf;
|
||||
|
||||
_ShmAllocBytes=bytes;
|
||||
_ShmAlloc=1;
|
||||
}
|
||||
#else
|
||||
void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
{
|
||||
void * ShmCommBuf ;
|
||||
@ -83,7 +116,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags)
|
||||
_ShmAllocBytes=bytes;
|
||||
_ShmAlloc=1;
|
||||
};
|
||||
|
||||
#endif
|
||||
void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes)
|
||||
{
|
||||
acceleratorMemSet(dest,0,bytes);
|
||||
}
|
||||
void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes)
|
||||
{
|
||||
acceleratorCopyToDevice(src,dest,bytes);
|
||||
}
|
||||
////////////////////////////////////////////////////////
|
||||
// Global shared functionality finished
|
||||
// Now move to per communicator functionality
|
||||
|
@ -49,4 +49,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#ifdef GRID_COMMS_SHMEM
|
||||
#include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator
|
||||
#endif
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto Cshift(const Expression &expr,int dim,int shift) -> decltype(closure(expr))
|
||||
{
|
||||
return Cshift(closure(expr),dim,shift);
|
||||
}
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
||||
|
@ -29,11 +29,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
extern Vector<std::pair<int,int> > Cshift_table;
|
||||
|
||||
///////////////////////////////////////////////////////////////////
|
||||
// Gather for when there is no need to SIMD split
|
||||
///////////////////////////////////////////////////////////////////
|
||||
template<class vobj> void
|
||||
Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
|
||||
Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0)
|
||||
{
|
||||
int rd = rhs.Grid()->_rdimensions[dimension];
|
||||
|
||||
@ -46,16 +48,16 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen
|
||||
int e2=rhs.Grid()->_slice_block[dimension];
|
||||
int ent = 0;
|
||||
|
||||
static Vector<std::pair<int,int> > table; table.resize(e1*e2);
|
||||
if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
|
||||
|
||||
int stride=rhs.Grid()->_slice_stride[dimension];
|
||||
|
||||
auto rhs_v = rhs.View();
|
||||
if ( cbmask == 0x3 ) {
|
||||
for(int n=0;n<e1;n++){
|
||||
for(int b=0;b<e2;b++){
|
||||
int o = n*stride;
|
||||
int bo = n*e2;
|
||||
table[ent++] = std::pair<int,int>(off+bo+b,so+o+b);
|
||||
Cshift_table[ent++] = std::pair<int,int>(off+bo+b,so+o+b);
|
||||
}
|
||||
}
|
||||
} else {
|
||||
@ -65,14 +67,26 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen
|
||||
int o = n*stride;
|
||||
int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);
|
||||
if ( ocb &cbmask ) {
|
||||
table[ent++]=std::pair<int,int> (off+bo++,so+o+b);
|
||||
Cshift_table[ent++]=std::pair<int,int> (off+bo++,so+o+b);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
thread_for(i,ent,{
|
||||
buffer[table[i].first]=rhs_v[table[i].second];
|
||||
});
|
||||
{
|
||||
auto buffer_p = & buffer[0];
|
||||
auto table = &Cshift_table[0];
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView(rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(i,ent,vobj::Nsimd(),{
|
||||
coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second]));
|
||||
});
|
||||
#else
|
||||
autoView(rhs_v , rhs, CpuRead);
|
||||
thread_for(i,ent,{
|
||||
buffer_p[table[i].first]=rhs_v[table[i].second];
|
||||
});
|
||||
#endif
|
||||
}
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////////////////////
|
||||
@ -95,43 +109,80 @@ Gather_plane_extract(const Lattice<vobj> &rhs,
|
||||
int e2=rhs.Grid()->_slice_block[dimension];
|
||||
int n1=rhs.Grid()->_slice_stride[dimension];
|
||||
|
||||
auto rhs_v = rhs.View();
|
||||
if ( cbmask ==0x3){
|
||||
thread_for_collapse(2,n,e1,{
|
||||
for(int b=0;b<e2;b++){
|
||||
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView(rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(nn,e1*e2,1,{
|
||||
int n = nn%e1;
|
||||
int b = nn/e1;
|
||||
int o = n*n1;
|
||||
int offset = b+n*e2;
|
||||
|
||||
vobj temp =rhs_v[so+o+b];
|
||||
extract<vobj>(temp,pointers,offset);
|
||||
}
|
||||
});
|
||||
});
|
||||
#else
|
||||
autoView(rhs_v , rhs, CpuRead);
|
||||
thread_for2d(n,e1,b,e2,{
|
||||
int o = n*n1;
|
||||
int offset = b+n*e2;
|
||||
|
||||
vobj temp =rhs_v[so+o+b];
|
||||
extract<vobj>(temp,pointers,offset);
|
||||
});
|
||||
#endif
|
||||
} else {
|
||||
Coordinate rdim=rhs.Grid()->_rdimensions;
|
||||
Coordinate cdm =rhs.Grid()->_checker_dim_mask;
|
||||
std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb?
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView(rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(nn,e1*e2,1,{
|
||||
int n = nn%e1;
|
||||
int b = nn/e1;
|
||||
|
||||
// Case of SIMD split AND checker dim cannot currently be hit, except in
|
||||
// Test_cshift_red_black code.
|
||||
std::cout << " Dense packed buffer WARNING " <<std::endl;
|
||||
thread_for_collapse(2,n,e1,{
|
||||
for(int b=0;b<e2;b++){
|
||||
Coordinate coor;
|
||||
|
||||
int o=n*n1;
|
||||
int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);
|
||||
int oindex = o+b;
|
||||
|
||||
int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm);
|
||||
|
||||
int ocb=1<<cb;
|
||||
int offset = b+n*e2;
|
||||
|
||||
if ( ocb & cbmask ) {
|
||||
vobj temp =rhs_v[so+o+b];
|
||||
extract<vobj>(temp,pointers,offset);
|
||||
}
|
||||
}
|
||||
});
|
||||
});
|
||||
#else
|
||||
autoView(rhs_v , rhs, CpuRead);
|
||||
thread_for2d(n,e1,b,e2,{
|
||||
|
||||
Coordinate coor;
|
||||
|
||||
int o=n*n1;
|
||||
int oindex = o+b;
|
||||
|
||||
int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm);
|
||||
|
||||
int ocb=1<<cb;
|
||||
int offset = b+n*e2;
|
||||
|
||||
if ( ocb & cbmask ) {
|
||||
vobj temp =rhs_v[so+o+b];
|
||||
extract<vobj>(temp,pointers,offset);
|
||||
}
|
||||
});
|
||||
#endif
|
||||
}
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////
|
||||
// Scatter for when there is no need to SIMD split
|
||||
//////////////////////////////////////////////////////
|
||||
template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vobj> &buffer, int dimension,int plane,int cbmask)
|
||||
template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask)
|
||||
{
|
||||
int rd = rhs.Grid()->_rdimensions[dimension];
|
||||
|
||||
@ -145,7 +196,8 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
|
||||
int e2=rhs.Grid()->_slice_block[dimension];
|
||||
int stride=rhs.Grid()->_slice_stride[dimension];
|
||||
|
||||
static std::vector<std::pair<int,int> > table; table.resize(e1*e2);
|
||||
if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
|
||||
|
||||
int ent =0;
|
||||
|
||||
if ( cbmask ==0x3 ) {
|
||||
@ -154,7 +206,7 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
|
||||
for(int b=0;b<e2;b++){
|
||||
int o =n*rhs.Grid()->_slice_stride[dimension];
|
||||
int bo =n*rhs.Grid()->_slice_block[dimension];
|
||||
table[ent++] = std::pair<int,int>(so+o+b,bo+b);
|
||||
Cshift_table[ent++] = std::pair<int,int>(so+o+b,bo+b);
|
||||
}
|
||||
}
|
||||
|
||||
@ -165,16 +217,27 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo
|
||||
int o =n*rhs.Grid()->_slice_stride[dimension];
|
||||
int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup
|
||||
if ( ocb & cbmask ) {
|
||||
table[ent++]=std::pair<int,int> (so+o+b,bo++);
|
||||
Cshift_table[ent++]=std::pair<int,int> (so+o+b,bo++);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
auto rhs_v = rhs.View();
|
||||
thread_for(i,ent,{
|
||||
rhs_v[table[i].first]=buffer[table[i].second];
|
||||
});
|
||||
{
|
||||
auto buffer_p = & buffer[0];
|
||||
auto table = &Cshift_table[0];
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView( rhs_v, rhs, AcceleratorWrite);
|
||||
accelerator_for(i,ent,vobj::Nsimd(),{
|
||||
coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second]));
|
||||
});
|
||||
#else
|
||||
autoView( rhs_v, rhs, CpuWrite);
|
||||
thread_for(i,ent,{
|
||||
rhs_v[table[i].first]=buffer_p[table[i].second];
|
||||
});
|
||||
#endif
|
||||
}
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////
|
||||
@ -194,21 +257,33 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
|
||||
int e2=rhs.Grid()->_slice_block[dimension];
|
||||
|
||||
if(cbmask ==0x3 ) {
|
||||
auto rhs_v = rhs.View();
|
||||
thread_for_collapse(2,n,e1,{
|
||||
for(int b=0;b<e2;b++){
|
||||
int o = n*rhs.Grid()->_slice_stride[dimension];
|
||||
int offset = b+n*rhs.Grid()->_slice_block[dimension];
|
||||
int _slice_stride = rhs.Grid()->_slice_stride[dimension];
|
||||
int _slice_block = rhs.Grid()->_slice_block[dimension];
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView( rhs_v , rhs, AcceleratorWrite);
|
||||
accelerator_for(nn,e1*e2,1,{
|
||||
int n = nn%e1;
|
||||
int b = nn/e1;
|
||||
int o = n*_slice_stride;
|
||||
int offset = b+n*_slice_block;
|
||||
merge(rhs_v[so+o+b],pointers,offset);
|
||||
});
|
||||
#else
|
||||
autoView( rhs_v , rhs, CpuWrite);
|
||||
thread_for2d(n,e1,b,e2,{
|
||||
int o = n*_slice_stride;
|
||||
int offset = b+n*_slice_block;
|
||||
merge(rhs_v[so+o+b],pointers,offset);
|
||||
}
|
||||
});
|
||||
#endif
|
||||
} else {
|
||||
|
||||
// Case of SIMD split AND checker dim cannot currently be hit, except in
|
||||
// Test_cshift_red_black code.
|
||||
// std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME
|
||||
std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME
|
||||
std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl;
|
||||
auto rhs_v = rhs.View();
|
||||
assert(0); // This will fail if hit on GPU
|
||||
autoView( rhs_v, rhs, CpuWrite);
|
||||
for(int n=0;n<e1;n++){
|
||||
for(int b=0;b<e2;b++){
|
||||
int o = n*rhs.Grid()->_slice_stride[dimension];
|
||||
@ -225,6 +300,7 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA
|
||||
//////////////////////////////////////////////////////
|
||||
// local to node block strided copies
|
||||
//////////////////////////////////////////////////////
|
||||
|
||||
template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask)
|
||||
{
|
||||
int rd = rhs.Grid()->_rdimensions[dimension];
|
||||
@ -239,14 +315,16 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs
|
||||
int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc
|
||||
int e2=rhs.Grid()->_slice_block[dimension];
|
||||
int stride = rhs.Grid()->_slice_stride[dimension];
|
||||
static std::vector<std::pair<int,int> > table; table.resize(e1*e2);
|
||||
|
||||
if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
|
||||
|
||||
int ent=0;
|
||||
|
||||
if(cbmask == 0x3 ){
|
||||
for(int n=0;n<e1;n++){
|
||||
for(int b=0;b<e2;b++){
|
||||
int o =n*stride+b;
|
||||
table[ent++] = std::pair<int,int>(lo+o,ro+o);
|
||||
Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o);
|
||||
}
|
||||
}
|
||||
} else {
|
||||
@ -255,23 +333,32 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs
|
||||
int o =n*stride+b;
|
||||
int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o);
|
||||
if ( ocb&cbmask ) {
|
||||
table[ent++] = std::pair<int,int>(lo+o,ro+o);
|
||||
Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
auto rhs_v = rhs.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for(i,ent,{
|
||||
lhs_v[table[i].first]=rhs_v[table[i].second];
|
||||
});
|
||||
|
||||
{
|
||||
auto table = &Cshift_table[0];
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView(rhs_v , rhs, AcceleratorRead);
|
||||
autoView(lhs_v , lhs, AcceleratorWrite);
|
||||
accelerator_for(i,ent,vobj::Nsimd(),{
|
||||
coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second]));
|
||||
});
|
||||
#else
|
||||
autoView(rhs_v , rhs, CpuRead);
|
||||
autoView(lhs_v , lhs, CpuWrite);
|
||||
thread_for(i,ent,{
|
||||
lhs_v[table[i].first]=rhs_v[table[i].second];
|
||||
});
|
||||
#endif
|
||||
}
|
||||
}
|
||||
|
||||
template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type)
|
||||
{
|
||||
|
||||
int rd = rhs.Grid()->_rdimensions[dimension];
|
||||
|
||||
if ( !rhs.Grid()->CheckerBoarded(dimension) ) {
|
||||
@ -285,29 +372,41 @@ template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vo
|
||||
int e2=rhs.Grid()->_slice_block [dimension];
|
||||
int stride = rhs.Grid()->_slice_stride[dimension];
|
||||
|
||||
static std::vector<std::pair<int,int> > table; table.resize(e1*e2);
|
||||
if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest
|
||||
|
||||
int ent=0;
|
||||
|
||||
if ( cbmask == 0x3 ) {
|
||||
for(int n=0;n<e1;n++){
|
||||
for(int b=0;b<e2;b++){
|
||||
int o =n*stride;
|
||||
table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
|
||||
Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
|
||||
}}
|
||||
} else {
|
||||
for(int n=0;n<e1;n++){
|
||||
for(int b=0;b<e2;b++){
|
||||
int o =n*stride;
|
||||
int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b);
|
||||
if ( ocb&cbmask ) table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
|
||||
if ( ocb&cbmask ) Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b);
|
||||
}}
|
||||
}
|
||||
|
||||
auto rhs_v = rhs.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for(i,ent,{
|
||||
permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
|
||||
});
|
||||
{
|
||||
auto table = &Cshift_table[0];
|
||||
#ifdef ACCELERATOR_CSHIFT
|
||||
autoView( rhs_v, rhs, AcceleratorRead);
|
||||
autoView( lhs_v, lhs, AcceleratorWrite);
|
||||
accelerator_for(i,ent,1,{
|
||||
permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
|
||||
});
|
||||
#else
|
||||
autoView( rhs_v, rhs, CpuRead);
|
||||
autoView( lhs_v, lhs, CpuWrite);
|
||||
thread_for(i,ent,{
|
||||
permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type);
|
||||
});
|
||||
#endif
|
||||
}
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////
|
||||
|
@ -101,7 +101,8 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob
|
||||
Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration
|
||||
}
|
||||
}
|
||||
|
||||
#define ACCELERATOR_CSHIFT_NO_COPY
|
||||
#ifdef ACCELERATOR_CSHIFT_NO_COPY
|
||||
template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
|
||||
{
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
@ -121,9 +122,9 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
|
||||
assert(shift<fd);
|
||||
|
||||
int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
|
||||
commVector<vobj> send_buf(buffer_size);
|
||||
commVector<vobj> recv_buf(buffer_size);
|
||||
|
||||
cshiftVector<vobj> send_buf(buffer_size);
|
||||
cshiftVector<vobj> recv_buf(buffer_size);
|
||||
|
||||
int cb= (cbmask==0x2)? Odd : Even;
|
||||
int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
|
||||
|
||||
@ -138,7 +139,7 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
|
||||
|
||||
} else {
|
||||
|
||||
int words = send_buf.size();
|
||||
int words = buffer_size;
|
||||
if (cbmask != 0x3) words=words>>1;
|
||||
|
||||
int bytes = words * sizeof(vobj);
|
||||
@ -150,12 +151,14 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r
|
||||
int xmit_to_rank;
|
||||
grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
grid->SendToRecvFrom((void *)&send_buf[0],
|
||||
xmit_to_rank,
|
||||
(void *)&recv_buf[0],
|
||||
recv_from_rank,
|
||||
bytes);
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask);
|
||||
@ -195,8 +198,15 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
|
||||
int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
|
||||
// int words = sizeof(vobj)/sizeof(vector_type);
|
||||
|
||||
std::vector<commVector<scalar_object> > send_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) );
|
||||
std::vector<commVector<scalar_object> > recv_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) );
|
||||
std::vector<cshiftVector<scalar_object> > send_buf_extract(Nsimd);
|
||||
std::vector<cshiftVector<scalar_object> > recv_buf_extract(Nsimd);
|
||||
scalar_object * recv_buf_extract_mpi;
|
||||
scalar_object * send_buf_extract_mpi;
|
||||
|
||||
for(int s=0;s<Nsimd;s++){
|
||||
send_buf_extract[s].resize(buffer_size);
|
||||
recv_buf_extract[s].resize(buffer_size);
|
||||
}
|
||||
|
||||
int bytes = buffer_size*sizeof(scalar_object);
|
||||
|
||||
@ -242,11 +252,204 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
|
||||
if(nbr_proc){
|
||||
grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);
|
||||
|
||||
grid->SendToRecvFrom((void *)&send_buf_extract[nbr_lane][0],
|
||||
grid->Barrier();
|
||||
|
||||
send_buf_extract_mpi = &send_buf_extract[nbr_lane][0];
|
||||
recv_buf_extract_mpi = &recv_buf_extract[i][0];
|
||||
grid->SendToRecvFrom((void *)send_buf_extract_mpi,
|
||||
xmit_to_rank,
|
||||
(void *)&recv_buf_extract[i][0],
|
||||
(void *)recv_buf_extract_mpi,
|
||||
recv_from_rank,
|
||||
bytes);
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
rpointers[i] = &recv_buf_extract[i][0];
|
||||
} else {
|
||||
rpointers[i] = &send_buf_extract[nbr_lane][0];
|
||||
}
|
||||
|
||||
}
|
||||
Scatter_plane_merge(ret,rpointers,dimension,x,cbmask);
|
||||
}
|
||||
|
||||
}
|
||||
#else
|
||||
template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
|
||||
{
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
|
||||
GridBase *grid=rhs.Grid();
|
||||
Lattice<vobj> temp(rhs.Grid());
|
||||
|
||||
int fd = rhs.Grid()->_fdimensions[dimension];
|
||||
int rd = rhs.Grid()->_rdimensions[dimension];
|
||||
int pd = rhs.Grid()->_processors[dimension];
|
||||
int simd_layout = rhs.Grid()->_simd_layout[dimension];
|
||||
int comm_dim = rhs.Grid()->_processors[dimension] >1 ;
|
||||
assert(simd_layout==1);
|
||||
assert(comm_dim==1);
|
||||
assert(shift>=0);
|
||||
assert(shift<fd);
|
||||
|
||||
int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension];
|
||||
cshiftVector<vobj> send_buf_v(buffer_size);
|
||||
cshiftVector<vobj> recv_buf_v(buffer_size);
|
||||
vobj *send_buf;
|
||||
vobj *recv_buf;
|
||||
{
|
||||
grid->ShmBufferFreeAll();
|
||||
size_t bytes = buffer_size*sizeof(vobj);
|
||||
send_buf=(vobj *)grid->ShmBufferMalloc(bytes);
|
||||
recv_buf=(vobj *)grid->ShmBufferMalloc(bytes);
|
||||
}
|
||||
|
||||
int cb= (cbmask==0x2)? Odd : Even;
|
||||
int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
|
||||
|
||||
for(int x=0;x<rd;x++){
|
||||
|
||||
int sx = (x+sshift)%rd;
|
||||
int comm_proc = ((x+sshift)/rd)%pd;
|
||||
|
||||
if (comm_proc==0) {
|
||||
|
||||
Copy_plane(ret,rhs,dimension,x,sx,cbmask);
|
||||
|
||||
} else {
|
||||
|
||||
int words = buffer_size;
|
||||
if (cbmask != 0x3) words=words>>1;
|
||||
|
||||
int bytes = words * sizeof(vobj);
|
||||
|
||||
Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask);
|
||||
|
||||
// int rank = grid->_processor;
|
||||
int recv_from_rank;
|
||||
int xmit_to_rank;
|
||||
grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank);
|
||||
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes);
|
||||
grid->SendToRecvFrom((void *)&send_buf[0],
|
||||
xmit_to_rank,
|
||||
(void *)&recv_buf[0],
|
||||
recv_from_rank,
|
||||
bytes);
|
||||
acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes);
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
template<class vobj> void Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask)
|
||||
{
|
||||
GridBase *grid=rhs.Grid();
|
||||
const int Nsimd = grid->Nsimd();
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
typedef typename vobj::scalar_object scalar_object;
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
|
||||
int fd = grid->_fdimensions[dimension];
|
||||
int rd = grid->_rdimensions[dimension];
|
||||
int ld = grid->_ldimensions[dimension];
|
||||
int pd = grid->_processors[dimension];
|
||||
int simd_layout = grid->_simd_layout[dimension];
|
||||
int comm_dim = grid->_processors[dimension] >1 ;
|
||||
|
||||
//std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd
|
||||
// << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout
|
||||
// << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl;
|
||||
|
||||
assert(comm_dim==1);
|
||||
assert(simd_layout==2);
|
||||
assert(shift>=0);
|
||||
assert(shift<fd);
|
||||
|
||||
int permute_type=grid->PermuteType(dimension);
|
||||
|
||||
///////////////////////////////////////////////
|
||||
// Simd direction uses an extract/merge pair
|
||||
///////////////////////////////////////////////
|
||||
int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension];
|
||||
// int words = sizeof(vobj)/sizeof(vector_type);
|
||||
|
||||
std::vector<cshiftVector<scalar_object> > send_buf_extract(Nsimd);
|
||||
std::vector<cshiftVector<scalar_object> > recv_buf_extract(Nsimd);
|
||||
scalar_object * recv_buf_extract_mpi;
|
||||
scalar_object * send_buf_extract_mpi;
|
||||
{
|
||||
size_t bytes = sizeof(scalar_object)*buffer_size;
|
||||
grid->ShmBufferFreeAll();
|
||||
send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
|
||||
recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes);
|
||||
}
|
||||
for(int s=0;s<Nsimd;s++){
|
||||
send_buf_extract[s].resize(buffer_size);
|
||||
recv_buf_extract[s].resize(buffer_size);
|
||||
}
|
||||
|
||||
int bytes = buffer_size*sizeof(scalar_object);
|
||||
|
||||
ExtractPointerArray<scalar_object> pointers(Nsimd); //
|
||||
ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers
|
||||
|
||||
///////////////////////////////////////////
|
||||
// Work out what to send where
|
||||
///////////////////////////////////////////
|
||||
int cb = (cbmask==0x2)? Odd : Even;
|
||||
int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb);
|
||||
|
||||
// loop over outer coord planes orthog to dim
|
||||
for(int x=0;x<rd;x++){
|
||||
|
||||
// FIXME call local permute copy if none are offnode.
|
||||
for(int i=0;i<Nsimd;i++){
|
||||
pointers[i] = &send_buf_extract[i][0];
|
||||
}
|
||||
int sx = (x+sshift)%rd;
|
||||
Gather_plane_extract(rhs,pointers,dimension,sx,cbmask);
|
||||
|
||||
for(int i=0;i<Nsimd;i++){
|
||||
|
||||
int inner_bit = (Nsimd>>(permute_type+1));
|
||||
int ic= (i&inner_bit)? 1:0;
|
||||
|
||||
int my_coor = rd*ic + x;
|
||||
int nbr_coor = my_coor+sshift;
|
||||
int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors
|
||||
|
||||
int nbr_ic = (nbr_coor%ld)/rd; // inner coord of peer
|
||||
int nbr_ox = (nbr_coor%rd); // outer coord of peer
|
||||
int nbr_lane = (i&(~inner_bit));
|
||||
|
||||
int recv_from_rank;
|
||||
int xmit_to_rank;
|
||||
|
||||
if (nbr_ic) nbr_lane|=inner_bit;
|
||||
|
||||
assert (sx == nbr_ox);
|
||||
|
||||
if(nbr_proc){
|
||||
grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);
|
||||
|
||||
grid->Barrier();
|
||||
|
||||
acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes);
|
||||
grid->SendToRecvFrom((void *)send_buf_extract_mpi,
|
||||
xmit_to_rank,
|
||||
(void *)recv_buf_extract_mpi,
|
||||
recv_from_rank,
|
||||
bytes);
|
||||
acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes);
|
||||
|
||||
grid->Barrier();
|
||||
rpointers[i] = &recv_buf_extract[i][0];
|
||||
} else {
|
||||
@ -258,7 +461,7 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
#endif
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
||||
|
4
Grid/cshift/Cshift_table.cc
Normal file
4
Grid/cshift/Cshift_table.cc
Normal file
@ -0,0 +1,4 @@
|
||||
#include <Grid/GridCore.h>
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
Vector<std::pair<int,int> > Cshift_table;
|
||||
NAMESPACE_END(Grid);
|
@ -26,6 +26,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#pragma once
|
||||
#include <Grid/lattice/Lattice_view.h>
|
||||
#include <Grid/lattice/Lattice_base.h>
|
||||
#include <Grid/lattice/Lattice_conformable.h>
|
||||
#include <Grid/lattice/Lattice_ET.h>
|
||||
@ -36,6 +37,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/lattice/Lattice_reduction.h>
|
||||
#include <Grid/lattice/Lattice_peekpoke.h>
|
||||
#include <Grid/lattice/Lattice_reality.h>
|
||||
#include <Grid/lattice/Lattice_real_imag.h>
|
||||
#include <Grid/lattice/Lattice_comparison_utils.h>
|
||||
#include <Grid/lattice/Lattice_comparison.h>
|
||||
#include <Grid/lattice/Lattice_coordinate.h>
|
||||
@ -43,4 +45,4 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/lattice/Lattice_rng.h>
|
||||
#include <Grid/lattice/Lattice_unary.h>
|
||||
#include <Grid/lattice/Lattice_transfer.h>
|
||||
|
||||
#include <Grid/lattice/Lattice_basis.h>
|
||||
|
@ -9,6 +9,7 @@ Copyright (C) 2015
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: neo <cossu@post.kek.jp>
|
||||
Author: Christoph Lehner <christoph@lhnr.de
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
@ -41,9 +42,24 @@ NAMESPACE_BEGIN(Grid);
|
||||
////////////////////////////////////////////////////
|
||||
// Predicated where support
|
||||
////////////////////////////////////////////////////
|
||||
#ifdef GRID_SIMT
|
||||
// drop to scalar in SIMT; cleaner in fact
|
||||
template <class iobj, class vobj, class robj>
|
||||
accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue,
|
||||
const robj &iffalse) {
|
||||
accelerator_inline vobj predicatedWhere(const iobj &predicate,
|
||||
const vobj &iftrue,
|
||||
const robj &iffalse)
|
||||
{
|
||||
Integer mask = TensorRemove(predicate);
|
||||
typename std::remove_const<vobj>::type ret= iffalse;
|
||||
if (mask) ret=iftrue;
|
||||
return ret;
|
||||
}
|
||||
#else
|
||||
template <class iobj, class vobj, class robj>
|
||||
accelerator_inline vobj predicatedWhere(const iobj &predicate,
|
||||
const vobj &iftrue,
|
||||
const robj &iffalse)
|
||||
{
|
||||
typename std::remove_const<vobj>::type ret;
|
||||
|
||||
typedef typename vobj::scalar_object scalar_object;
|
||||
@ -67,6 +83,7 @@ accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftru
|
||||
merge(ret, falsevals);
|
||||
return ret;
|
||||
}
|
||||
#endif
|
||||
|
||||
/////////////////////////////////////////////////////
|
||||
//Specialization of getVectorType for lattices
|
||||
@ -80,26 +97,62 @@ struct getVectorType<Lattice<T> >{
|
||||
//-- recursive evaluation of expressions; --
|
||||
// handle leaves of syntax tree
|
||||
///////////////////////////////////////////////////
|
||||
template<class sobj> accelerator_inline
|
||||
template<class sobj,
|
||||
typename std::enable_if<!is_lattice<sobj>::value&&!is_lattice_expr<sobj>::value,sobj>::type * = nullptr>
|
||||
accelerator_inline
|
||||
sobj eval(const uint64_t ss, const sobj &arg)
|
||||
{
|
||||
return arg;
|
||||
}
|
||||
|
||||
template <class lobj> accelerator_inline
|
||||
const lobj & eval(const uint64_t ss, const LatticeView<lobj> &arg)
|
||||
auto eval(const uint64_t ss, const LatticeView<lobj> &arg) -> decltype(arg(ss))
|
||||
{
|
||||
return arg[ss];
|
||||
return arg(ss);
|
||||
}
|
||||
|
||||
////////////////////////////////////////////
|
||||
//-- recursive evaluation of expressions; --
|
||||
// whole vector return, used only for expression return type inference
|
||||
///////////////////////////////////////////////////
|
||||
template<class sobj> accelerator_inline
|
||||
sobj vecEval(const uint64_t ss, const sobj &arg)
|
||||
{
|
||||
return arg;
|
||||
}
|
||||
template <class lobj> accelerator_inline
|
||||
const lobj & eval(const uint64_t ss, const Lattice<lobj> &arg)
|
||||
const lobj & vecEval(const uint64_t ss, const LatticeView<lobj> &arg)
|
||||
{
|
||||
auto view = arg.View();
|
||||
return view[ss];
|
||||
return arg[ss];
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////
|
||||
// handle nodes in syntax tree- eval one operand
|
||||
// vecEval needed (but never called as all expressions offloaded) to infer the return type
|
||||
// in SIMT contexts of closure.
|
||||
///////////////////////////////////////////////////
|
||||
template <typename Op, typename T1> accelerator_inline
|
||||
auto vecEval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)
|
||||
-> decltype(expr.op.func( vecEval(ss, expr.arg1)))
|
||||
{
|
||||
return expr.op.func( vecEval(ss, expr.arg1) );
|
||||
}
|
||||
// vecEval two operands
|
||||
template <typename Op, typename T1, typename T2> accelerator_inline
|
||||
auto vecEval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
-> decltype(expr.op.func( vecEval(ss,expr.arg1),vecEval(ss,expr.arg2)))
|
||||
{
|
||||
return expr.op.func( vecEval(ss,expr.arg1), vecEval(ss,expr.arg2) );
|
||||
}
|
||||
// vecEval three operands
|
||||
template <typename Op, typename T1, typename T2, typename T3> accelerator_inline
|
||||
auto vecEval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
|
||||
-> decltype(expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3)))
|
||||
{
|
||||
return expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3));
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////
|
||||
// handle nodes in syntax tree- eval one operand coalesced
|
||||
///////////////////////////////////////////////////
|
||||
template <typename Op, typename T1> accelerator_inline
|
||||
auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)
|
||||
@ -107,23 +160,41 @@ auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)
|
||||
{
|
||||
return expr.op.func( eval(ss, expr.arg1) );
|
||||
}
|
||||
///////////////////////
|
||||
// eval two operands
|
||||
///////////////////////
|
||||
template <typename Op, typename T1, typename T2> accelerator_inline
|
||||
auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
-> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2)))
|
||||
{
|
||||
return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) );
|
||||
}
|
||||
///////////////////////
|
||||
// eval three operands
|
||||
///////////////////////
|
||||
template <typename Op, typename T1, typename T2, typename T3> accelerator_inline
|
||||
auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
|
||||
-> decltype(expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3)))
|
||||
-> decltype(expr.op.func(eval(ss, expr.arg1),
|
||||
eval(ss, expr.arg2),
|
||||
eval(ss, expr.arg3)))
|
||||
{
|
||||
return expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3));
|
||||
#ifdef GRID_SIMT
|
||||
// Handles Nsimd (vInteger) != Nsimd(ComplexD)
|
||||
typedef decltype(vecEval(ss, expr.arg2)) rvobj;
|
||||
typedef typename std::remove_reference<rvobj>::type vobj;
|
||||
|
||||
const int Nsimd = vobj::vector_type::Nsimd();
|
||||
|
||||
auto vpred = vecEval(ss,expr.arg1);
|
||||
|
||||
ExtractBuffer<Integer> mask(Nsimd);
|
||||
extract<vInteger, Integer>(TensorRemove(vpred), mask);
|
||||
|
||||
int s = acceleratorSIMTlane(Nsimd);
|
||||
return expr.op.func(mask[s],
|
||||
eval(ss, expr.arg2),
|
||||
eval(ss, expr.arg3));
|
||||
#else
|
||||
return expr.op.func(eval(ss, expr.arg1),
|
||||
eval(ss, expr.arg2),
|
||||
eval(ss, expr.arg3));
|
||||
#endif
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
@ -179,16 +250,12 @@ inline void CBFromExpression(int &cb, const T1 &lat) // Lattice leaf
|
||||
cb = lat.Checkerboard();
|
||||
}
|
||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
|
||||
inline void CBFromExpression(int &cb, const T1 ¬lat) // non-lattice leaf
|
||||
{
|
||||
}
|
||||
|
||||
inline void CBFromExpression(int &cb, const T1 ¬lat) {} // non-lattice leaf
|
||||
template <typename Op, typename T1> inline
|
||||
void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr)
|
||||
{
|
||||
CBFromExpression(cb, expr.arg1); // recurse AST
|
||||
}
|
||||
|
||||
template <typename Op, typename T1, typename T2> inline
|
||||
void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
{
|
||||
@ -203,32 +270,86 @@ inline void CBFromExpression(int &cb, const LatticeTrinaryExpression<Op, T1, T2,
|
||||
CBFromExpression(cb, expr.arg3); // recurse AST
|
||||
}
|
||||
|
||||
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
// ViewOpen
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr>
|
||||
inline void ExpressionViewOpen(T1 &lat) // Lattice leaf
|
||||
{
|
||||
lat.ViewOpen(AcceleratorRead);
|
||||
}
|
||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
|
||||
inline void ExpressionViewOpen(T1 ¬lat) {}
|
||||
|
||||
template <typename Op, typename T1> inline
|
||||
void ExpressionViewOpen(LatticeUnaryExpression<Op, T1> &expr)
|
||||
{
|
||||
ExpressionViewOpen(expr.arg1); // recurse AST
|
||||
}
|
||||
|
||||
template <typename Op, typename T1, typename T2> inline
|
||||
void ExpressionViewOpen(LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
{
|
||||
ExpressionViewOpen(expr.arg1); // recurse AST
|
||||
ExpressionViewOpen(expr.arg2); // rrecurse AST
|
||||
}
|
||||
template <typename Op, typename T1, typename T2, typename T3>
|
||||
inline void ExpressionViewOpen(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
|
||||
{
|
||||
ExpressionViewOpen(expr.arg1); // recurse AST
|
||||
ExpressionViewOpen(expr.arg2); // recurse AST
|
||||
ExpressionViewOpen(expr.arg3); // recurse AST
|
||||
}
|
||||
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
// ViewClose
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr>
|
||||
inline void ExpressionViewClose( T1 &lat) // Lattice leaf
|
||||
{
|
||||
lat.ViewClose();
|
||||
}
|
||||
template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr>
|
||||
inline void ExpressionViewClose(T1 ¬lat) {}
|
||||
|
||||
template <typename Op, typename T1> inline
|
||||
void ExpressionViewClose(LatticeUnaryExpression<Op, T1> &expr)
|
||||
{
|
||||
ExpressionViewClose(expr.arg1); // recurse AST
|
||||
}
|
||||
template <typename Op, typename T1, typename T2> inline
|
||||
void ExpressionViewClose(LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
{
|
||||
ExpressionViewClose(expr.arg1); // recurse AST
|
||||
ExpressionViewClose(expr.arg2); // recurse AST
|
||||
}
|
||||
template <typename Op, typename T1, typename T2, typename T3>
|
||||
inline void ExpressionViewClose(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
|
||||
{
|
||||
ExpressionViewClose(expr.arg1); // recurse AST
|
||||
ExpressionViewClose(expr.arg2); // recurse AST
|
||||
ExpressionViewClose(expr.arg3); // recurse AST
|
||||
}
|
||||
|
||||
////////////////////////////////////////////
|
||||
// Unary operators and funcs
|
||||
////////////////////////////////////////////
|
||||
#define GridUnopClass(name, ret) \
|
||||
template <class arg> \
|
||||
struct name { \
|
||||
static auto accelerator_inline func(const arg a) -> decltype(ret) { return ret; } \
|
||||
template<class _arg> static auto accelerator_inline func(const _arg a) -> decltype(ret) { return ret; } \
|
||||
};
|
||||
|
||||
GridUnopClass(UnarySub, -a);
|
||||
GridUnopClass(UnaryNot, Not(a));
|
||||
GridUnopClass(UnaryAdj, adj(a));
|
||||
GridUnopClass(UnaryConj, conjugate(a));
|
||||
GridUnopClass(UnaryTrace, trace(a));
|
||||
GridUnopClass(UnaryTranspose, transpose(a));
|
||||
GridUnopClass(UnaryTa, Ta(a));
|
||||
GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a));
|
||||
GridUnopClass(UnaryReal, real(a));
|
||||
GridUnopClass(UnaryImag, imag(a));
|
||||
GridUnopClass(UnaryToReal, toReal(a));
|
||||
GridUnopClass(UnaryToComplex, toComplex(a));
|
||||
GridUnopClass(UnaryTimesI, timesI(a));
|
||||
GridUnopClass(UnaryTimesMinusI, timesMinusI(a));
|
||||
GridUnopClass(UnaryAbs, abs(a));
|
||||
GridUnopClass(UnarySqrt, sqrt(a));
|
||||
GridUnopClass(UnaryRsqrt, rsqrt(a));
|
||||
GridUnopClass(UnarySin, sin(a));
|
||||
GridUnopClass(UnaryCos, cos(a));
|
||||
GridUnopClass(UnaryAsin, asin(a));
|
||||
@ -240,10 +361,10 @@ GridUnopClass(UnaryExp, exp(a));
|
||||
// Binary operators
|
||||
////////////////////////////////////////////
|
||||
#define GridBinOpClass(name, combination) \
|
||||
template <class left, class right> \
|
||||
struct name { \
|
||||
template <class _left, class _right> \
|
||||
static auto accelerator_inline \
|
||||
func(const left &lhs, const right &rhs) \
|
||||
func(const _left &lhs, const _right &rhs) \
|
||||
-> decltype(combination) const \
|
||||
{ \
|
||||
return combination; \
|
||||
@ -263,10 +384,10 @@ GridBinOpClass(BinaryOrOr, lhs || rhs);
|
||||
// Trinary conditional op
|
||||
////////////////////////////////////////////////////
|
||||
#define GridTrinOpClass(name, combination) \
|
||||
template <class predicate, class left, class right> \
|
||||
struct name { \
|
||||
template <class _predicate,class _left, class _right> \
|
||||
static auto accelerator_inline \
|
||||
func(const predicate &pred, const left &lhs, const right &rhs) \
|
||||
func(const _predicate &pred, const _left &lhs, const _right &rhs) \
|
||||
-> decltype(combination) const \
|
||||
{ \
|
||||
return combination; \
|
||||
@ -274,17 +395,17 @@ GridBinOpClass(BinaryOrOr, lhs || rhs);
|
||||
};
|
||||
|
||||
GridTrinOpClass(TrinaryWhere,
|
||||
(predicatedWhere<predicate,
|
||||
typename std::remove_reference<left>::type,
|
||||
typename std::remove_reference<right>::type>(pred, lhs,rhs)));
|
||||
(predicatedWhere<
|
||||
typename std::remove_reference<_predicate>::type,
|
||||
typename std::remove_reference<_left>::type,
|
||||
typename std::remove_reference<_right>::type>(pred, lhs,rhs)));
|
||||
|
||||
////////////////////////////////////////////
|
||||
// Operator syntactical glue
|
||||
////////////////////////////////////////////
|
||||
|
||||
#define GRID_UNOP(name) name<decltype(eval(0, arg))>
|
||||
#define GRID_BINOP(name) name<decltype(eval(0, lhs)), decltype(eval(0, rhs))>
|
||||
#define GRID_TRINOP(name) name<decltype(eval(0, pred)), decltype(eval(0, lhs)), decltype(eval(0, rhs))>
|
||||
#define GRID_UNOP(name) name
|
||||
#define GRID_BINOP(name) name
|
||||
#define GRID_TRINOP(name) name
|
||||
|
||||
#define GRID_DEF_UNOP(op, name) \
|
||||
template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \
|
||||
@ -330,22 +451,17 @@ GridTrinOpClass(TrinaryWhere,
|
||||
GRID_DEF_UNOP(operator-, UnarySub);
|
||||
GRID_DEF_UNOP(Not, UnaryNot);
|
||||
GRID_DEF_UNOP(operator!, UnaryNot);
|
||||
GRID_DEF_UNOP(adj, UnaryAdj);
|
||||
GRID_DEF_UNOP(conjugate, UnaryConj);
|
||||
//GRID_DEF_UNOP(adj, UnaryAdj);
|
||||
//GRID_DEF_UNOP(conjugate, UnaryConj);
|
||||
GRID_DEF_UNOP(trace, UnaryTrace);
|
||||
GRID_DEF_UNOP(transpose, UnaryTranspose);
|
||||
GRID_DEF_UNOP(Ta, UnaryTa);
|
||||
GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup);
|
||||
GRID_DEF_UNOP(real, UnaryReal);
|
||||
GRID_DEF_UNOP(imag, UnaryImag);
|
||||
GRID_DEF_UNOP(toReal, UnaryToReal);
|
||||
GRID_DEF_UNOP(toComplex, UnaryToComplex);
|
||||
GRID_DEF_UNOP(timesI, UnaryTimesI);
|
||||
GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI);
|
||||
GRID_DEF_UNOP(abs, UnaryAbs); // abs overloaded in cmath C++98; DON'T do the
|
||||
// abs-fabs-dabs-labs thing
|
||||
GRID_DEF_UNOP(sqrt, UnarySqrt);
|
||||
GRID_DEF_UNOP(rsqrt, UnaryRsqrt);
|
||||
GRID_DEF_UNOP(sin, UnarySin);
|
||||
GRID_DEF_UNOP(cos, UnaryCos);
|
||||
GRID_DEF_UNOP(asin, UnaryAsin);
|
||||
@ -370,29 +486,36 @@ GRID_DEF_TRINOP(where, TrinaryWhere);
|
||||
/////////////////////////////////////////////////////////////
|
||||
template <class Op, class T1>
|
||||
auto closure(const LatticeUnaryExpression<Op, T1> &expr)
|
||||
-> Lattice<decltype(expr.op.func(eval(0, expr.arg1)))>
|
||||
-> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type >
|
||||
{
|
||||
Lattice<decltype(expr.op.func(eval(0, expr.arg1)))> ret(expr);
|
||||
Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > ret(expr);
|
||||
return ret;
|
||||
}
|
||||
template <class Op, class T1, class T2>
|
||||
auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr)
|
||||
-> Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))>
|
||||
-> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type >
|
||||
{
|
||||
Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))> ret(expr);
|
||||
Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > ret(expr);
|
||||
return ret;
|
||||
}
|
||||
template <class Op, class T1, class T2, class T3>
|
||||
auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)
|
||||
-> Lattice<decltype(expr.op.func(eval(0, expr.arg1),
|
||||
eval(0, expr.arg2),
|
||||
eval(0, expr.arg3)))>
|
||||
-> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),
|
||||
vecEval(0, expr.arg2),
|
||||
vecEval(0, expr.arg3)))>::type >
|
||||
{
|
||||
Lattice<decltype(expr.op.func(eval(0, expr.arg1),
|
||||
eval(0, expr.arg2),
|
||||
eval(0, expr.arg3)))> ret(expr);
|
||||
Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),
|
||||
vecEval(0, expr.arg2),
|
||||
vecEval(0, expr.arg3)))>::type > ret(expr);
|
||||
return ret;
|
||||
}
|
||||
#define EXPRESSION_CLOSURE(function) \
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> \
|
||||
auto function(Expression &expr) -> decltype(function(closure(expr))) \
|
||||
{ \
|
||||
return function(closure(expr)); \
|
||||
}
|
||||
|
||||
|
||||
#undef GRID_UNOP
|
||||
#undef GRID_BINOP
|
||||
|
@ -7,6 +7,7 @@
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
@ -36,9 +37,9 @@ NAMESPACE_BEGIN(Grid);
|
||||
template<class obj1,class obj2,class obj3> inline
|
||||
void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
conformable(ret,rhs);
|
||||
conformable(lhs,rhs);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
@ -55,13 +56,13 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
conformable(lhs,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto lhs_t=lhs_v(ss);
|
||||
auto rhs_t=rhs_v(ss);
|
||||
auto tmp =ret_v(ss);
|
||||
mac(&tmp,&lhs_t,&rhs_t);
|
||||
coalescedWrite(ret_v[ss],tmp);
|
||||
});
|
||||
@ -72,9 +73,9 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
conformable(lhs,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto lhs_t=lhs_v(ss);
|
||||
@ -88,9 +89,9 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
conformable(lhs,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto lhs_t=lhs_v(ss);
|
||||
@ -107,8 +108,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(lhs,ret);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
mult(&tmp,&lhs_v(ss),&rhs);
|
||||
@ -120,10 +121,10 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(ret,lhs);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto tmp =ret_v(ss);
|
||||
auto lhs_t=lhs_v(ss);
|
||||
mac(&tmp,&lhs_t,&rhs);
|
||||
coalescedWrite(ret_v[ss],tmp);
|
||||
@ -134,8 +135,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(ret,lhs);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto lhs_t=lhs_v(ss);
|
||||
@ -147,8 +148,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
conformable(lhs,ret);
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto lhs_t=lhs_v(ss);
|
||||
@ -164,8 +165,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto rhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( rhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto rhs_t=rhs_v(ss);
|
||||
@ -178,10 +179,10 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto rhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( rhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto tmp =ret_v(ss);
|
||||
auto rhs_t=rhs_v(ss);
|
||||
mac(&tmp,&lhs,&rhs_t);
|
||||
coalescedWrite(ret_v[ss],tmp);
|
||||
@ -192,8 +193,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto rhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( rhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto rhs_t=rhs_v(ss);
|
||||
@ -205,8 +206,8 @@ template<class obj1,class obj2,class obj3> inline
|
||||
void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
conformable(ret,rhs);
|
||||
auto ret_v = ret.View();
|
||||
auto rhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( rhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{
|
||||
decltype(coalescedRead(obj1())) tmp;
|
||||
auto rhs_t=rhs_v(ss);
|
||||
@ -220,9 +221,9 @@ void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &
|
||||
ret.Checkerboard() = x.Checkerboard();
|
||||
conformable(ret,x);
|
||||
conformable(x,y);
|
||||
auto ret_v = ret.View();
|
||||
auto x_v = x.View();
|
||||
auto y_v = y.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( x_v , x, AcceleratorRead);
|
||||
autoView( y_v , y, AcceleratorRead);
|
||||
accelerator_for(ss,x_v.size(),vobj::Nsimd(),{
|
||||
auto tmp = a*x_v(ss)+y_v(ss);
|
||||
coalescedWrite(ret_v[ss],tmp);
|
||||
@ -233,9 +234,9 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice
|
||||
ret.Checkerboard() = x.Checkerboard();
|
||||
conformable(ret,x);
|
||||
conformable(x,y);
|
||||
auto ret_v = ret.View();
|
||||
auto x_v = x.View();
|
||||
auto y_v = y.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( x_v , x, AcceleratorRead);
|
||||
autoView( y_v , y, AcceleratorRead);
|
||||
accelerator_for(ss,x_v.size(),vobj::Nsimd(),{
|
||||
auto tmp = a*x_v(ss)+b*y_v(ss);
|
||||
coalescedWrite(ret_v[ss],tmp);
|
||||
|
@ -9,6 +9,7 @@ Copyright (C) 2015
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
@ -28,6 +29,7 @@ See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#pragma once
|
||||
|
||||
#define STREAMING_STORES
|
||||
@ -36,129 +38,6 @@ NAMESPACE_BEGIN(Grid);
|
||||
|
||||
extern int GridCshiftPermuteMap[4][16];
|
||||
|
||||
///////////////////////////////////////////////////////////////////
|
||||
// Base class which can be used by traits to pick up behaviour
|
||||
///////////////////////////////////////////////////////////////////
|
||||
class LatticeBase {};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Conformable checks; same instance of Grid required
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
void accelerator_inline conformable(GridBase *lhs,GridBase *rhs)
|
||||
{
|
||||
assert(lhs == rhs);
|
||||
}
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Minimal base class containing only data valid to access from accelerator
|
||||
// _odata will be a managed pointer in CUDA
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Force access to lattice through a view object.
|
||||
// prevents writing of code that will not offload to GPU, but perhaps annoyingly
|
||||
// strict since host could could in principle direct access through the lattice object
|
||||
// Need to decide programming model.
|
||||
#define LATTICE_VIEW_STRICT
|
||||
template<class vobj> class LatticeAccelerator : public LatticeBase
|
||||
{
|
||||
protected:
|
||||
GridBase *_grid;
|
||||
int checkerboard;
|
||||
vobj *_odata; // A managed pointer
|
||||
uint64_t _odata_size;
|
||||
public:
|
||||
accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr) { };
|
||||
accelerator_inline uint64_t oSites(void) const { return _odata_size; };
|
||||
accelerator_inline int Checkerboard(void) const { return checkerboard; };
|
||||
accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view
|
||||
accelerator_inline void Conformable(GridBase * &grid) const
|
||||
{
|
||||
if (grid) conformable(grid, _grid);
|
||||
else grid = _grid;
|
||||
};
|
||||
};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// A View class which provides accessor to the data.
|
||||
// This will be safe to call from accelerator_for and is trivially copy constructible
|
||||
// The copy constructor for this will need to be used by device lambda functions
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class vobj>
|
||||
class LatticeView : public LatticeAccelerator<vobj>
|
||||
{
|
||||
public:
|
||||
|
||||
|
||||
// Rvalue
|
||||
#ifdef __CUDA_ARCH__
|
||||
accelerator_inline const typename vobj::scalar_object operator()(size_t i) const { return coalescedRead(this->_odata[i]); }
|
||||
#else
|
||||
accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; }
|
||||
#endif
|
||||
|
||||
accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; };
|
||||
accelerator_inline vobj & operator[](size_t i) { return this->_odata[i]; };
|
||||
|
||||
accelerator_inline uint64_t begin(void) const { return 0;};
|
||||
accelerator_inline uint64_t end(void) const { return this->_odata_size; };
|
||||
accelerator_inline uint64_t size(void) const { return this->_odata_size; };
|
||||
|
||||
LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me)
|
||||
{
|
||||
}
|
||||
};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Lattice expression types used by ET to assemble the AST
|
||||
//
|
||||
// Need to be able to detect code paths according to the whether a lattice object or not
|
||||
// so introduce some trait type things
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
class LatticeExpressionBase {};
|
||||
|
||||
template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>;
|
||||
template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >;
|
||||
|
||||
template<class T, bool isLattice> struct ViewMapBase { typedef T Type; };
|
||||
template<class T> struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; };
|
||||
template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >;
|
||||
|
||||
template <typename Op, typename _T1>
|
||||
class LatticeUnaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {};
|
||||
};
|
||||
|
||||
template <typename Op, typename _T1, typename _T2>
|
||||
class LatticeBinaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
typedef typename ViewMap<_T2>::Type T2;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
T2 arg2;
|
||||
LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {};
|
||||
};
|
||||
|
||||
template <typename Op, typename _T1, typename _T2, typename _T3>
|
||||
class LatticeTrinaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
typedef typename ViewMap<_T2>::Type T2;
|
||||
typedef typename ViewMap<_T3>::Type T3;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
T2 arg2;
|
||||
T3 arg3;
|
||||
LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {};
|
||||
};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// The real lattice class, with normal copy and assignment semantics.
|
||||
// This contains extra (host resident) grid pointer data that may be accessed by host code
|
||||
@ -194,24 +73,33 @@ private:
|
||||
dealloc();
|
||||
|
||||
this->_odata_size = size;
|
||||
if ( size )
|
||||
if ( size )
|
||||
this->_odata = alloc.allocate(this->_odata_size);
|
||||
else
|
||||
this->_odata = nullptr;
|
||||
}
|
||||
}
|
||||
public:
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
// Can use to make accelerator dirty without copy from host ; useful for temporaries "dont care" prev contents
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
void SetViewMode(ViewMode mode) {
|
||||
LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode);
|
||||
accessor.ViewClose();
|
||||
}
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
// Return a view object that may be dereferenced in site loops.
|
||||
// The view is trivially copy constructible and may be copied to an accelerator device
|
||||
// in device lambdas
|
||||
/////////////////////////////////////////////////////////////////////////////////
|
||||
LatticeView<vobj> View (void) const
|
||||
|
||||
LatticeView<vobj> View (ViewMode mode) const
|
||||
{
|
||||
LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this));
|
||||
LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode);
|
||||
return accessor;
|
||||
}
|
||||
|
||||
|
||||
~Lattice() {
|
||||
if ( this->_odata_size ) {
|
||||
dealloc();
|
||||
@ -231,12 +119,16 @@ public:
|
||||
CBFromExpression(cb,expr);
|
||||
assert( (cb==Odd) || (cb==Even));
|
||||
this->checkerboard=cb;
|
||||
|
||||
auto me = View();
|
||||
accelerator_for(ss,me.size(),1,{
|
||||
auto tmp = eval(ss,expr);
|
||||
vstream(me[ss],tmp);
|
||||
|
||||
auto exprCopy = expr;
|
||||
ExpressionViewOpen(exprCopy);
|
||||
auto me = View(AcceleratorWriteDiscard);
|
||||
accelerator_for(ss,me.size(),vobj::Nsimd(),{
|
||||
auto tmp = eval(ss,exprCopy);
|
||||
coalescedWrite(me[ss],tmp);
|
||||
});
|
||||
me.ViewClose();
|
||||
ExpressionViewClose(exprCopy);
|
||||
return *this;
|
||||
}
|
||||
template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr)
|
||||
@ -251,11 +143,15 @@ public:
|
||||
assert( (cb==Odd) || (cb==Even));
|
||||
this->checkerboard=cb;
|
||||
|
||||
auto me = View();
|
||||
accelerator_for(ss,me.size(),1,{
|
||||
auto tmp = eval(ss,expr);
|
||||
vstream(me[ss],tmp);
|
||||
auto exprCopy = expr;
|
||||
ExpressionViewOpen(exprCopy);
|
||||
auto me = View(AcceleratorWriteDiscard);
|
||||
accelerator_for(ss,me.size(),vobj::Nsimd(),{
|
||||
auto tmp = eval(ss,exprCopy);
|
||||
coalescedWrite(me[ss],tmp);
|
||||
});
|
||||
me.ViewClose();
|
||||
ExpressionViewClose(exprCopy);
|
||||
return *this;
|
||||
}
|
||||
template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr)
|
||||
@ -269,11 +165,15 @@ public:
|
||||
CBFromExpression(cb,expr);
|
||||
assert( (cb==Odd) || (cb==Even));
|
||||
this->checkerboard=cb;
|
||||
auto me = View();
|
||||
accelerator_for(ss,me.size(),1,{
|
||||
auto tmp = eval(ss,expr);
|
||||
vstream(me[ss],tmp);
|
||||
auto exprCopy = expr;
|
||||
ExpressionViewOpen(exprCopy);
|
||||
auto me = View(AcceleratorWriteDiscard);
|
||||
accelerator_for(ss,me.size(),vobj::Nsimd(),{
|
||||
auto tmp = eval(ss,exprCopy);
|
||||
coalescedWrite(me[ss],tmp);
|
||||
});
|
||||
me.ViewClose();
|
||||
ExpressionViewClose(exprCopy);
|
||||
return *this;
|
||||
}
|
||||
//GridFromExpression is tricky to do
|
||||
@ -324,10 +224,11 @@ public:
|
||||
}
|
||||
|
||||
template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){
|
||||
auto me = View();
|
||||
auto me = View(CpuWrite);
|
||||
thread_for(ss,me.size(),{
|
||||
me[ss] = r;
|
||||
me[ss]= r;
|
||||
});
|
||||
me.ViewClose();
|
||||
return *this;
|
||||
}
|
||||
|
||||
@ -337,11 +238,12 @@ public:
|
||||
///////////////////////////////////////////
|
||||
// user defined constructor
|
||||
///////////////////////////////////////////
|
||||
Lattice(GridBase *grid) {
|
||||
Lattice(GridBase *grid,ViewMode mode=AcceleratorWriteDiscard) {
|
||||
this->_grid = grid;
|
||||
resize(this->_grid->oSites());
|
||||
assert((((uint64_t)&this->_odata[0])&0xF) ==0);
|
||||
this->checkerboard=0;
|
||||
SetViewMode(mode);
|
||||
}
|
||||
|
||||
// virtual ~Lattice(void) = default;
|
||||
@ -357,7 +259,6 @@ public:
|
||||
// copy constructor
|
||||
///////////////////////////////////////////
|
||||
Lattice(const Lattice& r){
|
||||
// std::cout << "Lattice constructor(const Lattice &) "<<this<<std::endl;
|
||||
this->_grid = r.Grid();
|
||||
resize(this->_grid->oSites());
|
||||
*this = r;
|
||||
@ -380,11 +281,12 @@ public:
|
||||
typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0;
|
||||
conformable(*this,r);
|
||||
this->checkerboard = r.Checkerboard();
|
||||
auto me = View();
|
||||
auto him= r.View();
|
||||
auto me = View(AcceleratorWriteDiscard);
|
||||
auto him= r.View(AcceleratorRead);
|
||||
accelerator_for(ss,me.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(me[ss],him(ss));
|
||||
});
|
||||
me.ViewClose(); him.ViewClose();
|
||||
return *this;
|
||||
}
|
||||
|
||||
@ -394,11 +296,12 @@ public:
|
||||
inline Lattice<vobj> & operator = (const Lattice<vobj> & r){
|
||||
this->checkerboard = r.Checkerboard();
|
||||
conformable(*this,r);
|
||||
auto me = View();
|
||||
auto him= r.View();
|
||||
auto me = View(AcceleratorWriteDiscard);
|
||||
auto him= r.View(AcceleratorRead);
|
||||
accelerator_for(ss,me.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(me[ss],him(ss));
|
||||
});
|
||||
me.ViewClose(); him.ViewClose();
|
||||
return *this;
|
||||
}
|
||||
///////////////////////////////////////////
|
||||
|
248
Grid/lattice/Lattice_basis.h
Normal file
248
Grid/lattice/Lattice_basis.h
Normal file
@ -0,0 +1,248 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/lattice/Lattice_basis.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
|
||||
#pragma once
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class Field>
|
||||
void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)
|
||||
{
|
||||
// If assume basis[j] are already orthonormal,
|
||||
// can take all inner products in parallel saving 2x bandwidth
|
||||
// Save 3x bandwidth on the second line of loop.
|
||||
// perhaps 2.5x speed up.
|
||||
// 2x overall in Multigrid Lanczos
|
||||
for(int j=0; j<k; ++j){
|
||||
auto ip = innerProduct(basis[j],w);
|
||||
w = w - ip*basis[j];
|
||||
}
|
||||
}
|
||||
|
||||
template<class VField, class Matrix>
|
||||
void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)
|
||||
{
|
||||
typedef decltype(basis[0]) Field;
|
||||
typedef decltype(basis[0].View(AcceleratorRead)) View;
|
||||
|
||||
Vector<View> basis_v; basis_v.reserve(basis.size());
|
||||
typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj;
|
||||
typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t;
|
||||
GridBase* grid = basis[0].Grid();
|
||||
|
||||
for(int k=0;k<basis.size();k++){
|
||||
basis_v.push_back(basis[k].View(AcceleratorWrite));
|
||||
}
|
||||
|
||||
#if ( (!defined(GRID_CUDA)) )
|
||||
int max_threads = thread_max();
|
||||
Vector < vobj > Bt(Nm * max_threads);
|
||||
thread_region
|
||||
{
|
||||
vobj* B = &Bt[Nm * thread_num()];
|
||||
thread_for_in_region(ss, grid->oSites(),{
|
||||
for(int j=j0; j<j1; ++j) B[j]=0.;
|
||||
|
||||
for(int j=j0; j<j1; ++j){
|
||||
for(int k=k0; k<k1; ++k){
|
||||
B[j] +=Qt(j,k) * basis_v[k][ss];
|
||||
}
|
||||
}
|
||||
for(int j=j0; j<j1; ++j){
|
||||
basis_v[j][ss] = B[j];
|
||||
}
|
||||
});
|
||||
}
|
||||
#else
|
||||
View *basis_vp = &basis_v[0];
|
||||
|
||||
int nrot = j1-j0;
|
||||
if (!nrot) // edge case not handled gracefully by Cuda
|
||||
return;
|
||||
|
||||
uint64_t oSites =grid->oSites();
|
||||
uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead
|
||||
|
||||
Vector <vobj> Bt(siteBlock * nrot);
|
||||
auto Bp=&Bt[0];
|
||||
|
||||
// GPU readable copy of matrix
|
||||
Vector<Coeff_t> Qt_jv(Nm*Nm);
|
||||
Coeff_t *Qt_p = & Qt_jv[0];
|
||||
thread_for(i,Nm*Nm,{
|
||||
int j = i/Nm;
|
||||
int k = i%Nm;
|
||||
Qt_p[i]=Qt(j,k);
|
||||
});
|
||||
|
||||
// Block the loop to keep storage footprint down
|
||||
for(uint64_t s=0;s<oSites;s+=siteBlock){
|
||||
|
||||
// remaining work in this block
|
||||
int ssites=MIN(siteBlock,oSites-s);
|
||||
|
||||
// zero out the accumulators
|
||||
accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{
|
||||
decltype(coalescedRead(Bp[ss])) z;
|
||||
z=Zero();
|
||||
coalescedWrite(Bp[ss],z);
|
||||
});
|
||||
|
||||
accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
|
||||
|
||||
int j =sj%nrot;
|
||||
int jj =j0+j;
|
||||
int ss =sj/nrot;
|
||||
int sss=ss+s;
|
||||
|
||||
for(int k=k0; k<k1; ++k){
|
||||
auto tmp = coalescedRead(Bp[ss*nrot+j]);
|
||||
coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss]));
|
||||
}
|
||||
});
|
||||
|
||||
accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{
|
||||
int j =sj%nrot;
|
||||
int jj =j0+j;
|
||||
int ss =sj/nrot;
|
||||
int sss=ss+s;
|
||||
coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j]));
|
||||
});
|
||||
}
|
||||
#endif
|
||||
|
||||
for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
|
||||
}
|
||||
|
||||
// Extract a single rotated vector
|
||||
template<class Field>
|
||||
void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)
|
||||
{
|
||||
typedef decltype(basis[0].View(AcceleratorRead)) View;
|
||||
typedef typename Field::vector_object vobj;
|
||||
GridBase* grid = basis[0].Grid();
|
||||
|
||||
result.Checkerboard() = basis[0].Checkerboard();
|
||||
|
||||
Vector<View> basis_v; basis_v.reserve(basis.size());
|
||||
for(int k=0;k<basis.size();k++){
|
||||
basis_v.push_back(basis[k].View(AcceleratorRead));
|
||||
}
|
||||
vobj zz=Zero();
|
||||
Vector<double> Qt_jv(Nm);
|
||||
double * Qt_j = & Qt_jv[0];
|
||||
for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k);
|
||||
|
||||
auto basis_vp=& basis_v[0];
|
||||
autoView(result_v,result,AcceleratorWrite);
|
||||
accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{
|
||||
vobj zzz=Zero();
|
||||
auto B=coalescedRead(zzz);
|
||||
for(int k=k0; k<k1; ++k){
|
||||
B +=Qt_j[k] * coalescedRead(basis_vp[k][ss]);
|
||||
}
|
||||
coalescedWrite(result_v[ss], B);
|
||||
});
|
||||
for(int k=0;k<basis.size();k++) basis_v[k].ViewClose();
|
||||
}
|
||||
|
||||
template<class Field>
|
||||
void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)
|
||||
{
|
||||
int vlen = idx.size();
|
||||
|
||||
assert(vlen>=1);
|
||||
assert(vlen<=sort_vals.size());
|
||||
assert(vlen<=_v.size());
|
||||
|
||||
for (size_t i=0;i<vlen;i++) {
|
||||
|
||||
if (idx[i] != i) {
|
||||
|
||||
//////////////////////////////////////
|
||||
// idx[i] is a table of desired sources giving a permutation.
|
||||
// Swap v[i] with v[idx[i]].
|
||||
// Find j>i for which _vnew[j] = _vold[i],
|
||||
// track the move idx[j] => idx[i]
|
||||
// track the move idx[i] => i
|
||||
//////////////////////////////////////
|
||||
size_t j;
|
||||
for (j=i;j<idx.size();j++)
|
||||
if (idx[j]==i)
|
||||
break;
|
||||
|
||||
assert(idx[i] > i); assert(j!=idx.size()); assert(idx[j]==i);
|
||||
|
||||
swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy
|
||||
std::swap(sort_vals[i],sort_vals[idx[i]]);
|
||||
|
||||
idx[j] = idx[i];
|
||||
idx[i] = i;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)
|
||||
{
|
||||
std::vector<int> idx(sort_vals.size());
|
||||
std::iota(idx.begin(), idx.end(), 0);
|
||||
|
||||
// sort indexes based on comparing values in v
|
||||
std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) {
|
||||
return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]);
|
||||
});
|
||||
return idx;
|
||||
}
|
||||
|
||||
template<class Field>
|
||||
void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)
|
||||
{
|
||||
std::vector<int> idx = basisSortGetIndex(sort_vals);
|
||||
if (reverse)
|
||||
std::reverse(idx.begin(), idx.end());
|
||||
|
||||
basisReorderInPlace(_v,sort_vals,idx);
|
||||
}
|
||||
|
||||
// PAB: faster to compute the inner products first then fuse loops.
|
||||
// If performance critical can improve.
|
||||
template<class Field>
|
||||
void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) {
|
||||
result = Zero();
|
||||
assert(_v.size()==eval.size());
|
||||
int N = (int)_v.size();
|
||||
for (int i=0;i<N;i++) {
|
||||
Field& tmp = _v[i];
|
||||
axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result);
|
||||
}
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
@ -42,34 +42,6 @@ NAMESPACE_BEGIN(Grid);
|
||||
|
||||
typedef iScalar<vInteger> vPredicate ;
|
||||
|
||||
/*
|
||||
template <class iobj, class vobj, class robj> accelerator_inline
|
||||
vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, const robj &iffalse)
|
||||
{
|
||||
typename std::remove_const<vobj>::type ret;
|
||||
|
||||
typedef typename vobj::scalar_object scalar_object;
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
|
||||
const int Nsimd = vobj::vector_type::Nsimd();
|
||||
|
||||
ExtractBuffer<Integer> mask(Nsimd);
|
||||
ExtractBuffer<scalar_object> truevals(Nsimd);
|
||||
ExtractBuffer<scalar_object> falsevals(Nsimd);
|
||||
|
||||
extract(iftrue, truevals);
|
||||
extract(iffalse, falsevals);
|
||||
extract<vInteger, Integer>(TensorRemove(predicate), mask);
|
||||
|
||||
for (int s = 0; s < Nsimd; s++) {
|
||||
if (mask[s]) falsevals[s] = truevals[s];
|
||||
}
|
||||
|
||||
merge(ret, falsevals);
|
||||
return ret;
|
||||
}
|
||||
*/
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
// compare lattice to lattice
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
@ -78,9 +50,9 @@ template<class vfunctor,class lobj,class robj>
|
||||
inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs)
|
||||
{
|
||||
Lattice<vPredicate> ret(rhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( lhs_v, lhs, CpuRead);
|
||||
autoView( rhs_v, rhs, CpuRead);
|
||||
autoView( ret_v, ret, CpuWrite);
|
||||
thread_for( ss, rhs_v.size(), {
|
||||
ret_v[ss]=op(lhs_v[ss],rhs_v[ss]);
|
||||
});
|
||||
@ -93,8 +65,8 @@ template<class vfunctor,class lobj,class robj>
|
||||
inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs)
|
||||
{
|
||||
Lattice<vPredicate> ret(lhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( lhs_v, lhs, CpuRead);
|
||||
autoView( ret_v, ret, CpuWrite);
|
||||
thread_for( ss, lhs_v.size(), {
|
||||
ret_v[ss]=op(lhs_v[ss],rhs);
|
||||
});
|
||||
@ -107,8 +79,8 @@ template<class vfunctor,class lobj,class robj>
|
||||
inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs)
|
||||
{
|
||||
Lattice<vPredicate> ret(rhs.Grid());
|
||||
auto rhs_v = rhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( rhs_v, rhs, CpuRead);
|
||||
autoView( ret_v, ret, CpuWrite);
|
||||
thread_for( ss, rhs_v.size(), {
|
||||
ret_v[ss]=op(lhs,rhs_v[ss]);
|
||||
});
|
||||
|
@ -37,7 +37,7 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu)
|
||||
GridBase *grid = l.Grid();
|
||||
int Nsimd = grid->iSites();
|
||||
|
||||
auto l_v = l.View();
|
||||
autoView(l_v, l, CpuWrite);
|
||||
thread_for( o, grid->oSites(), {
|
||||
vector_type vI;
|
||||
Coordinate gcoor;
|
||||
@ -51,23 +51,5 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu)
|
||||
});
|
||||
};
|
||||
|
||||
// LatticeCoordinate();
|
||||
// FIXME for debug; deprecate this; made obscelete by
|
||||
template<class vobj> void lex_sites(Lattice<vobj> &l){
|
||||
auto l_v = l.View();
|
||||
Real *v_ptr = (Real *)&l_v[0];
|
||||
size_t o_len = l.Grid()->oSites();
|
||||
size_t v_len = sizeof(vobj)/sizeof(vRealF);
|
||||
size_t vec_len = vRealF::Nsimd();
|
||||
|
||||
for(int i=0;i<o_len;i++){
|
||||
for(int j=0;j<v_len;j++){
|
||||
for(int vv=0;vv<vec_len;vv+=2){
|
||||
v_ptr[i*v_len*vec_len+j*vec_len+vv ]= i+vv*500;
|
||||
v_ptr[i*v_len*vec_len+j*vec_len+vv+1]= i+vv*500;
|
||||
}
|
||||
}}
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
|
@ -43,8 +43,8 @@ template<class vobj>
|
||||
inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced>
|
||||
{
|
||||
Lattice<typename vobj::tensor_reduced> ret(rhs.Grid());
|
||||
auto rhs_v = rhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss)));
|
||||
});
|
||||
@ -56,9 +56,9 @@ template<class vobj>
|
||||
inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced>
|
||||
{
|
||||
Lattice<typename vobj::tensor_reduced> ret(rhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss)));
|
||||
});
|
||||
@ -73,9 +73,9 @@ inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Latt
|
||||
typedef decltype(coalescedRead(ll())) sll;
|
||||
typedef decltype(coalescedRead(rr())) srr;
|
||||
Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
auto ret_v = ret.View();
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
accelerator_for(ss,rhs_v.size(),1,{
|
||||
// FIXME had issues with scalar version of outer
|
||||
// Use vector [] operator and don't read coalesce this loop
|
||||
|
@ -51,9 +51,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice
|
||||
int block =FullGrid->_slice_block [Orthog];
|
||||
int nblock=FullGrid->_slice_nblock[Orthog];
|
||||
int ostride=FullGrid->_ostride[Orthog];
|
||||
auto X_v = X.View();
|
||||
auto Y_v = Y.View();
|
||||
auto R_v = R.View();
|
||||
autoView( X_v , X, CpuRead);
|
||||
autoView( Y_v , Y, CpuRead);
|
||||
autoView( R_v , R, CpuWrite);
|
||||
thread_region
|
||||
{
|
||||
std::vector<vobj> s_x(Nblock);
|
||||
@ -97,8 +97,8 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<
|
||||
int nblock=FullGrid->_slice_nblock[Orthog];
|
||||
int ostride=FullGrid->_ostride[Orthog];
|
||||
|
||||
auto X_v = X.View();
|
||||
auto R_v = R.View();
|
||||
autoView( X_v , X, CpuRead);
|
||||
autoView( R_v , R, CpuWrite);
|
||||
|
||||
thread_region
|
||||
{
|
||||
@ -156,8 +156,8 @@ static void sliceInnerProductMatrix( Eigen::MatrixXcd &mat, const Lattice<vobj>
|
||||
int ostride=FullGrid->_ostride[Orthog];
|
||||
|
||||
typedef typename vobj::vector_typeD vector_typeD;
|
||||
auto lhs_v = lhs.View();
|
||||
auto rhs_v = rhs.View();
|
||||
autoView( lhs_v , lhs, CpuRead);
|
||||
autoView( rhs_v , rhs, CpuRead);
|
||||
thread_region {
|
||||
std::vector<vobj> Left(Nblock);
|
||||
std::vector<vobj> Right(Nblock);
|
||||
|
@ -46,9 +46,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Ind
|
||||
{
|
||||
Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid());
|
||||
ret.Checkerboard()=lhs.Checkerboard();
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for( ss, lhs_v.size(), {
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] = peekIndex<Index>(lhs_v[ss],i);
|
||||
});
|
||||
return ret;
|
||||
@ -58,9 +58,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd
|
||||
{
|
||||
Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid());
|
||||
ret.Checkerboard()=lhs.Checkerboard();
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for( ss, lhs_v.size(), {
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j);
|
||||
});
|
||||
return ret;
|
||||
@ -72,18 +72,18 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd
|
||||
template<int Index,class vobj>
|
||||
void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i)
|
||||
{
|
||||
auto rhs_v = rhs.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for( ss, lhs_v.size(), {
|
||||
autoView( rhs_v, rhs, AcceleratorRead);
|
||||
autoView( lhs_v, lhs, AcceleratorWrite);
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i);
|
||||
});
|
||||
}
|
||||
template<int Index,class vobj>
|
||||
void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j)
|
||||
{
|
||||
auto rhs_v = rhs.View();
|
||||
auto lhs_v = lhs.View();
|
||||
thread_for( ss, lhs_v.size(), {
|
||||
autoView( rhs_v, rhs, AcceleratorRead);
|
||||
autoView( lhs_v, lhs, AcceleratorWrite);
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j);
|
||||
});
|
||||
}
|
||||
@ -111,7 +111,7 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){
|
||||
|
||||
// extract-modify-merge cycle is easiest way and this is not perf critical
|
||||
ExtractBuffer<sobj> buf(Nsimd);
|
||||
auto l_v = l.View();
|
||||
autoView( l_v , l, CpuWrite);
|
||||
if ( rank == grid->ThisRank() ) {
|
||||
extract(l_v[odx],buf);
|
||||
buf[idx] = s;
|
||||
@ -141,7 +141,7 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){
|
||||
grid->GlobalCoorToRankIndex(rank,odx,idx,site);
|
||||
|
||||
ExtractBuffer<sobj> buf(Nsimd);
|
||||
auto l_v = l.View();
|
||||
autoView( l_v , l, CpuWrite);
|
||||
extract(l_v[odx],buf);
|
||||
|
||||
s = buf[idx];
|
||||
@ -151,21 +151,21 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){
|
||||
return;
|
||||
};
|
||||
|
||||
|
||||
//////////////////////////////////////////////////////////
|
||||
// Peek a scalar object from the SIMD array
|
||||
//////////////////////////////////////////////////////////
|
||||
// Must be CPU read view
|
||||
template<class vobj,class sobj>
|
||||
accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site){
|
||||
|
||||
GridBase *grid = l.Grid();
|
||||
|
||||
inline void peekLocalSite(sobj &s,const LatticeView<vobj> &l,Coordinate &site)
|
||||
{
|
||||
GridBase *grid = l.getGrid();
|
||||
assert(l.mode==CpuRead);
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
|
||||
int Nsimd = grid->Nsimd();
|
||||
|
||||
assert( l.Checkerboard()== l.Grid()->CheckerBoard(site));
|
||||
assert( l.Checkerboard()== grid->CheckerBoard(site));
|
||||
assert( sizeof(sobj)*Nsimd == sizeof(vobj));
|
||||
|
||||
static const int words=sizeof(vobj)/sizeof(vector_type);
|
||||
@ -173,8 +173,7 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate
|
||||
idx= grid->iIndex(site);
|
||||
odx= grid->oIndex(site);
|
||||
|
||||
auto l_v = l.View();
|
||||
scalar_type * vp = (scalar_type *)&l_v[odx];
|
||||
scalar_type * vp = (scalar_type *)&l[odx];
|
||||
scalar_type * pt = (scalar_type *)&s;
|
||||
|
||||
for(int w=0;w<words;w++){
|
||||
@ -183,18 +182,27 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate
|
||||
|
||||
return;
|
||||
};
|
||||
|
||||
template<class vobj,class sobj>
|
||||
accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate &site){
|
||||
inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site)
|
||||
{
|
||||
autoView(lv,l,CpuRead);
|
||||
peekLocalSite(s,lv,site);
|
||||
return;
|
||||
};
|
||||
|
||||
GridBase *grid=l.Grid();
|
||||
// Must be CPU write view
|
||||
template<class vobj,class sobj>
|
||||
inline void pokeLocalSite(const sobj &s,LatticeView<vobj> &l,Coordinate &site)
|
||||
{
|
||||
GridBase *grid=l.getGrid();
|
||||
assert(l.mode==CpuWrite);
|
||||
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
typedef typename vobj::vector_type vector_type;
|
||||
|
||||
int Nsimd = grid->Nsimd();
|
||||
|
||||
assert( l.Checkerboard()== l.Grid()->CheckerBoard(site));
|
||||
assert( l.Checkerboard()== grid->CheckerBoard(site));
|
||||
assert( sizeof(sobj)*Nsimd == sizeof(vobj));
|
||||
|
||||
static const int words=sizeof(vobj)/sizeof(vector_type);
|
||||
@ -202,13 +210,19 @@ accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate
|
||||
idx= grid->iIndex(site);
|
||||
odx= grid->oIndex(site);
|
||||
|
||||
auto l_v = l.View();
|
||||
scalar_type * vp = (scalar_type *)&l_v[odx];
|
||||
scalar_type * vp = (scalar_type *)&l[odx];
|
||||
scalar_type * pt = (scalar_type *)&s;
|
||||
for(int w=0;w<words;w++){
|
||||
vp[idx+w*Nsimd] = pt[w];
|
||||
}
|
||||
return;
|
||||
};
|
||||
|
||||
template<class vobj,class sobj>
|
||||
inline void pokeLocalSite(const sobj &s, Lattice<vobj> &l,Coordinate &site)
|
||||
{
|
||||
autoView(lv,l,CpuWrite);
|
||||
pokeLocalSite(s,lv,site);
|
||||
return;
|
||||
};
|
||||
|
||||
|
79
Grid/lattice/Lattice_real_imag.h
Normal file
79
Grid/lattice/Lattice_real_imag.h
Normal file
@ -0,0 +1,79 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/lattice/Lattice_reality.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: neo <cossu@post.kek.jp>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#ifndef GRID_LATTICE_REAL_IMAG_H
|
||||
#define GRID_LATTICE_REAL_IMAG_H
|
||||
|
||||
|
||||
// FIXME .. this is the sector of the code
|
||||
// I am most worried about the directions
|
||||
// The choice of burying complex in the SIMD
|
||||
// is making the use of "real" and "imag" very cumbersome
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class vobj> inline Lattice<vobj> real(const Lattice<vobj> &lhs){
|
||||
Lattice<vobj> ret(lhs.Grid());
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard()=lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] =real(lhs_v[ss]);
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
template<class vobj> inline Lattice<vobj> imag(const Lattice<vobj> &lhs){
|
||||
Lattice<vobj> ret(lhs.Grid());
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard()=lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] =imag(lhs_v[ss]);
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto real(const Expression &expr) -> decltype(real(closure(expr)))
|
||||
{
|
||||
return real(closure(expr));
|
||||
}
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto imag(const Expression &expr) -> decltype(imag(closure(expr)))
|
||||
{
|
||||
return imag(closure(expr));
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
@ -40,24 +40,77 @@ NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){
|
||||
Lattice<vobj> ret(lhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto ret_v = ret.View();
|
||||
accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
|
||||
coalescedWrite(ret_v[ss], adj(lhs_v(ss)));
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard()=lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] = adj(lhs_v[ss]);
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
|
||||
template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){
|
||||
Lattice<vobj> ret(lhs.Grid());
|
||||
auto lhs_v = lhs.View();
|
||||
auto ret_v = ret.View();
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
|
||||
coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss)));
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
|
||||
template<class vobj> inline Lattice<typename vobj::Complexified> toComplex(const Lattice<vobj> &lhs){
|
||||
Lattice<typename vobj::Complexified> ret(lhs.Grid());
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] = toComplex(lhs_v[ss]);
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
template<class vobj> inline Lattice<typename vobj::Realified> toReal(const Lattice<vobj> &lhs){
|
||||
Lattice<typename vobj::Realified> ret(lhs.Grid());
|
||||
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
|
||||
ret.Checkerboard() = lhs.Checkerboard();
|
||||
accelerator_for( ss, lhs_v.size(), 1, {
|
||||
ret_v[ss] = toReal(lhs_v[ss]);
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
|
||||
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto toComplex(const Expression &expr) -> decltype(closure(expr))
|
||||
{
|
||||
return toComplex(closure(expr));
|
||||
}
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto toReal(const Expression &expr) -> decltype(closure(expr))
|
||||
{
|
||||
return toReal(closure(expr));
|
||||
}
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto adj(const Expression &expr) -> decltype(closure(expr))
|
||||
{
|
||||
return adj(closure(expr));
|
||||
}
|
||||
template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>
|
||||
auto conjugate(const Expression &expr) -> decltype(closure(expr))
|
||||
{
|
||||
return conjugate(closure(expr));
|
||||
}
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
||||
|
@ -5,6 +5,7 @@
|
||||
Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk>
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
@ -24,7 +25,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
#include <Grid/Grid_Eigen_Dense.h>
|
||||
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
|
||||
#include <Grid/lattice/Lattice_reduction_gpu.h>
|
||||
#endif
|
||||
|
||||
@ -38,7 +39,36 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites)
|
||||
{
|
||||
typedef typename vobj::scalar_object sobj;
|
||||
|
||||
const int Nsimd = vobj::Nsimd();
|
||||
// const int Nsimd = vobj::Nsimd();
|
||||
const int nthread = GridThread::GetThreads();
|
||||
|
||||
Vector<sobj> sumarray(nthread);
|
||||
for(int i=0;i<nthread;i++){
|
||||
sumarray[i]=Zero();
|
||||
}
|
||||
|
||||
thread_for(thr,nthread, {
|
||||
int nwork, mywork, myoff;
|
||||
nwork = osites;
|
||||
GridThread::GetWork(nwork,thr,mywork,myoff);
|
||||
vobj vvsum=Zero();
|
||||
for(int ss=myoff;ss<mywork+myoff; ss++){
|
||||
vvsum = vvsum + arg[ss];
|
||||
}
|
||||
sumarray[thr]=Reduce(vvsum);
|
||||
});
|
||||
|
||||
sobj ssum=Zero(); // sum across threads
|
||||
for(int i=0;i<nthread;i++){
|
||||
ssum = ssum+sumarray[i];
|
||||
}
|
||||
return ssum;
|
||||
}
|
||||
template<class vobj>
|
||||
inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites)
|
||||
{
|
||||
typedef typename vobj::scalar_objectD sobj;
|
||||
|
||||
const int nthread = GridThread::GetThreads();
|
||||
|
||||
Vector<sobj> sumarray(nthread);
|
||||
@ -62,23 +92,69 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites)
|
||||
ssum = ssum+sumarray[i];
|
||||
}
|
||||
|
||||
return ssum;
|
||||
typedef typename vobj::scalar_object ssobj;
|
||||
ssobj ret = ssum;
|
||||
return ret;
|
||||
}
|
||||
/*
|
||||
Threaded max, don't use for now
|
||||
template<class Double>
|
||||
inline Double max(const Double *arg, Integer osites)
|
||||
{
|
||||
// const int Nsimd = vobj::Nsimd();
|
||||
const int nthread = GridThread::GetThreads();
|
||||
|
||||
std::vector<Double> maxarray(nthread);
|
||||
|
||||
thread_for(thr,nthread, {
|
||||
int nwork, mywork, myoff;
|
||||
nwork = osites;
|
||||
GridThread::GetWork(nwork,thr,mywork,myoff);
|
||||
Double max=arg[0];
|
||||
for(int ss=myoff;ss<mywork+myoff; ss++){
|
||||
if( arg[ss] > max ) max = arg[ss];
|
||||
}
|
||||
maxarray[thr]=max;
|
||||
});
|
||||
|
||||
Double tmax=maxarray[0];
|
||||
for(int i=0;i<nthread;i++){
|
||||
if (maxarray[i]>tmax) tmax = maxarray[i];
|
||||
}
|
||||
return tmax;
|
||||
}
|
||||
*/
|
||||
template<class vobj>
|
||||
inline typename vobj::scalar_object sum(const vobj *arg, Integer osites)
|
||||
{
|
||||
#ifdef GRID_NVCC
|
||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
|
||||
return sum_gpu(arg,osites);
|
||||
#else
|
||||
return sum_cpu(arg,osites);
|
||||
#endif
|
||||
}
|
||||
template<class vobj>
|
||||
inline typename vobj::scalar_objectD sumD(const vobj *arg, Integer osites)
|
||||
{
|
||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
|
||||
return sumD_gpu(arg,osites);
|
||||
#else
|
||||
return sumD_cpu(arg,osites);
|
||||
#endif
|
||||
}
|
||||
|
||||
template<class vobj>
|
||||
inline typename vobj::scalar_object sum(const Lattice<vobj> &arg)
|
||||
{
|
||||
auto arg_v = arg.View();
|
||||
#if defined(GRID_CUDA)||defined(GRID_HIP)
|
||||
autoView( arg_v, arg, AcceleratorRead);
|
||||
Integer osites = arg.Grid()->oSites();
|
||||
auto ssum= sum(&arg_v[0],osites);
|
||||
auto ssum= sum_gpu(&arg_v[0],osites);
|
||||
#else
|
||||
autoView(arg_v, arg, CpuRead);
|
||||
Integer osites = arg.Grid()->oSites();
|
||||
auto ssum= sum_cpu(&arg_v[0],osites);
|
||||
#endif
|
||||
arg.Grid()->GlobalSum(ssum);
|
||||
return ssum;
|
||||
}
|
||||
@ -91,57 +167,77 @@ template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){
|
||||
return real(nrm);
|
||||
}
|
||||
|
||||
//The global maximum of the site norm2
|
||||
template<class vobj> inline RealD maxLocalNorm2(const Lattice<vobj> &arg)
|
||||
{
|
||||
typedef typename vobj::tensor_reduced vscalar; //iScalar<iScalar<.... <vPODtype> > >
|
||||
typedef typename vscalar::scalar_object scalar; //iScalar<iScalar<.... <PODtype> > >
|
||||
|
||||
Lattice<vscalar> inner = localNorm2(arg);
|
||||
|
||||
auto grid = arg.Grid();
|
||||
|
||||
RealD max;
|
||||
for(int l=0;l<grid->lSites();l++){
|
||||
Coordinate coor;
|
||||
scalar val;
|
||||
RealD r;
|
||||
grid->LocalIndexToLocalCoor(l,coor);
|
||||
peekLocalSite(val,inner,coor);
|
||||
r=real(TensorRemove(val));
|
||||
if( (l==0) || (r>max)){
|
||||
max=r;
|
||||
}
|
||||
}
|
||||
grid->GlobalMax(max);
|
||||
return max;
|
||||
}
|
||||
|
||||
// Double inner product
|
||||
template<class vobj>
|
||||
inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right)
|
||||
inline ComplexD rankInnerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right)
|
||||
{
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
typedef typename vobj::vector_typeD vector_type;
|
||||
ComplexD nrm;
|
||||
|
||||
GridBase *grid = left.Grid();
|
||||
|
||||
// Might make all code paths go this way.
|
||||
auto left_v = left.View();
|
||||
auto right_v=right.View();
|
||||
|
||||
const uint64_t nsimd = grid->Nsimd();
|
||||
const uint64_t sites = grid->oSites();
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
// GPU - SIMT lane compliance...
|
||||
typedef decltype(innerProduct(left_v[0],right_v[0])) inner_t;
|
||||
// Might make all code paths go this way.
|
||||
typedef decltype(innerProductD(vobj(),vobj())) inner_t;
|
||||
Vector<inner_t> inner_tmp(sites);
|
||||
auto inner_tmp_v = &inner_tmp[0];
|
||||
|
||||
|
||||
{
|
||||
autoView( left_v , left, AcceleratorRead);
|
||||
autoView( right_v,right, AcceleratorRead);
|
||||
|
||||
accelerator_for( ss, sites, nsimd,{
|
||||
auto x_l = left_v(ss);
|
||||
auto y_l = right_v(ss);
|
||||
coalescedWrite(inner_tmp_v[ss],innerProduct(x_l,y_l));
|
||||
})
|
||||
// GPU - SIMT lane compliance...
|
||||
accelerator_for( ss, sites, 1,{
|
||||
auto x_l = left_v[ss];
|
||||
auto y_l = right_v[ss];
|
||||
inner_tmp_v[ss]=innerProductD(x_l,y_l);
|
||||
});
|
||||
}
|
||||
|
||||
// This is in single precision and fails some tests
|
||||
// Need a sumD that sums in double
|
||||
nrm = TensorRemove(sumD_gpu(inner_tmp_v,sites));
|
||||
#else
|
||||
// CPU
|
||||
typedef decltype(innerProductD(left_v[0],right_v[0])) inner_t;
|
||||
Vector<inner_t> inner_tmp(sites);
|
||||
auto inner_tmp_v = &inner_tmp[0];
|
||||
|
||||
accelerator_for( ss, sites, nsimd,{
|
||||
auto x_l = left_v[ss];
|
||||
auto y_l = right_v[ss];
|
||||
inner_tmp_v[ss]=innerProductD(x_l,y_l);
|
||||
})
|
||||
nrm = TensorRemove(sum(inner_tmp_v,sites));
|
||||
#endif
|
||||
grid->GlobalSum(nrm);
|
||||
|
||||
auto anrm = sum(inner_tmp_v,sites);
|
||||
nrm = anrm;
|
||||
return nrm;
|
||||
}
|
||||
|
||||
template<class vobj>
|
||||
inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) {
|
||||
GridBase *grid = left.Grid();
|
||||
ComplexD nrm = rankInnerProduct(left,right);
|
||||
grid->GlobalSum(nrm);
|
||||
return nrm;
|
||||
}
|
||||
|
||||
|
||||
/////////////////////////
|
||||
// Fast axpby_norm
|
||||
// z = a x + b y
|
||||
@ -167,45 +263,67 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt
|
||||
|
||||
GridBase *grid = x.Grid();
|
||||
|
||||
auto x_v=x.View();
|
||||
auto y_v=y.View();
|
||||
auto z_v=z.View();
|
||||
|
||||
const uint64_t nsimd = grid->Nsimd();
|
||||
const uint64_t sites = grid->oSites();
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
// GPU
|
||||
typedef decltype(innerProduct(x_v[0],y_v[0])) inner_t;
|
||||
Vector<inner_t> inner_tmp(sites);
|
||||
auto inner_tmp_v = &inner_tmp[0];
|
||||
autoView( x_v, x, AcceleratorRead);
|
||||
autoView( y_v, y, AcceleratorRead);
|
||||
autoView( z_v, z, AcceleratorWrite);
|
||||
|
||||
accelerator_for( ss, sites, nsimd,{
|
||||
auto tmp = a*x_v(ss)+b*y_v(ss);
|
||||
coalescedWrite(inner_tmp_v[ss],innerProduct(tmp,tmp));
|
||||
coalescedWrite(z_v[ss],tmp);
|
||||
});
|
||||
|
||||
nrm = real(TensorRemove(sumD_gpu(inner_tmp_v,sites)));
|
||||
#else
|
||||
// CPU
|
||||
typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t;
|
||||
Vector<inner_t> inner_tmp(sites);
|
||||
auto inner_tmp_v = &inner_tmp[0];
|
||||
|
||||
accelerator_for( ss, sites, nsimd,{
|
||||
auto tmp = a*x_v(ss)+b*y_v(ss);
|
||||
|
||||
accelerator_for( ss, sites, 1,{
|
||||
auto tmp = a*x_v[ss]+b*y_v[ss];
|
||||
inner_tmp_v[ss]=innerProductD(tmp,tmp);
|
||||
z_v[ss]=tmp;
|
||||
});
|
||||
// Already promoted to double
|
||||
nrm = real(TensorRemove(sum(inner_tmp_v,sites)));
|
||||
#endif
|
||||
grid->GlobalSum(nrm);
|
||||
return nrm;
|
||||
}
|
||||
|
||||
|
||||
template<class vobj> strong_inline void
|
||||
innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Lattice<vobj> &right)
|
||||
{
|
||||
conformable(left,right);
|
||||
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
typedef typename vobj::vector_typeD vector_type;
|
||||
Vector<ComplexD> tmp(2);
|
||||
|
||||
GridBase *grid = left.Grid();
|
||||
|
||||
const uint64_t nsimd = grid->Nsimd();
|
||||
const uint64_t sites = grid->oSites();
|
||||
|
||||
// GPU
|
||||
typedef decltype(innerProductD(vobj(),vobj())) inner_t;
|
||||
typedef decltype(innerProductD(vobj(),vobj())) norm_t;
|
||||
Vector<inner_t> inner_tmp(sites);
|
||||
Vector<norm_t> norm_tmp(sites);
|
||||
auto inner_tmp_v = &inner_tmp[0];
|
||||
auto norm_tmp_v = &norm_tmp[0];
|
||||
{
|
||||
autoView(left_v,left, AcceleratorRead);
|
||||
autoView(right_v,right,AcceleratorRead);
|
||||
accelerator_for( ss, sites, 1,{
|
||||
auto left_tmp = left_v[ss];
|
||||
inner_tmp_v[ss]=innerProductD(left_tmp,right_v[ss]);
|
||||
norm_tmp_v [ss]=innerProductD(left_tmp,left_tmp);
|
||||
});
|
||||
}
|
||||
|
||||
tmp[0] = TensorRemove(sum(inner_tmp_v,sites));
|
||||
tmp[1] = TensorRemove(sum(norm_tmp_v,sites));
|
||||
|
||||
grid->GlobalSumVector(&tmp[0],2); // keep norm Complex -> can use GlobalSumVector
|
||||
ip = tmp[0];
|
||||
nrm = real(tmp[1]);
|
||||
}
|
||||
|
||||
template<class Op,class T1>
|
||||
inline auto sum(const LatticeUnaryExpression<Op,T1> & expr)
|
||||
->typename decltype(expr.op.func(eval(0,expr.arg1)))::scalar_object
|
||||
@ -271,7 +389,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector<
|
||||
|
||||
// sum over reduced dimension planes, breaking out orthog dir
|
||||
// Parallel over orthog direction
|
||||
auto Data_v=Data.View();
|
||||
autoView( Data_v, Data, CpuRead);
|
||||
thread_for( r,rd, {
|
||||
int so=r*grid->_ostride[orthogdim]; // base offset for start of plane
|
||||
for(int n=0;n<e1;n++){
|
||||
@ -349,8 +467,8 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti
|
||||
int e2= grid->_slice_block [orthogdim];
|
||||
int stride=grid->_slice_stride[orthogdim];
|
||||
|
||||
auto lhv=lhs.View();
|
||||
auto rhv=rhs.View();
|
||||
autoView( lhv, lhs, CpuRead);
|
||||
autoView( rhv, rhs, CpuRead);
|
||||
thread_for( r,rd,{
|
||||
|
||||
int so=r*grid->_ostride[orthogdim]; // base offset for start of plane
|
||||
@ -457,14 +575,12 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice
|
||||
|
||||
tensor_reduced at; at=av;
|
||||
|
||||
auto Rv=R.View();
|
||||
auto Xv=X.View();
|
||||
auto Yv=Y.View();
|
||||
thread_for_collapse(2, n, e1, {
|
||||
for(int b=0;b<e2;b++){
|
||||
autoView( Rv, R, CpuWrite);
|
||||
autoView( Xv, X, CpuRead);
|
||||
autoView( Yv, Y, CpuRead);
|
||||
thread_for2d( n, e1, b,e2, {
|
||||
int ss= so+n*stride+b;
|
||||
Rv[ss] = at*Xv[ss]+Yv[ss];
|
||||
}
|
||||
});
|
||||
}
|
||||
};
|
||||
@ -517,9 +633,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice
|
||||
int nblock=FullGrid->_slice_nblock[Orthog];
|
||||
int ostride=FullGrid->_ostride[Orthog];
|
||||
|
||||
auto X_v=X.View();
|
||||
auto Y_v=Y.View();
|
||||
auto R_v=R.View();
|
||||
autoView( X_v, X, CpuRead);
|
||||
autoView( Y_v, Y, CpuRead);
|
||||
autoView( R_v, R, CpuWrite);
|
||||
thread_region
|
||||
{
|
||||
Vector<vobj> s_x(Nblock);
|
||||
@ -564,13 +680,14 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<
|
||||
// int nl=1;
|
||||
|
||||
//FIXME package in a convenient iterator
|
||||
// thread_for2d_in_region
|
||||
//Should loop over a plane orthogonal to direction "Orthog"
|
||||
int stride=FullGrid->_slice_stride[Orthog];
|
||||
int block =FullGrid->_slice_block [Orthog];
|
||||
int nblock=FullGrid->_slice_nblock[Orthog];
|
||||
int ostride=FullGrid->_ostride[Orthog];
|
||||
auto R_v = R.View();
|
||||
auto X_v = X.View();
|
||||
autoView( R_v, R, CpuWrite);
|
||||
autoView( X_v, X, CpuRead);
|
||||
thread_region
|
||||
{
|
||||
std::vector<vobj> s_x(Nblock);
|
||||
@ -628,8 +745,8 @@ static void sliceInnerProductMatrix( Eigen::MatrixXcd &mat, const Lattice<vobj>
|
||||
|
||||
typedef typename vobj::vector_typeD vector_typeD;
|
||||
|
||||
auto lhs_v=lhs.View();
|
||||
auto rhs_v=rhs.View();
|
||||
autoView( lhs_v, lhs, CpuRead);
|
||||
autoView( rhs_v, rhs, CpuRead);
|
||||
thread_region
|
||||
{
|
||||
std::vector<vobj> Left(Nblock);
|
||||
|
@ -1,7 +1,14 @@
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
#define WARP_SIZE 32
|
||||
#ifdef GRID_HIP
|
||||
extern hipDeviceProp_t *gpu_props;
|
||||
#define WARP_SIZE 64
|
||||
#endif
|
||||
#ifdef GRID_CUDA
|
||||
extern cudaDeviceProp *gpu_props;
|
||||
#define WARP_SIZE 32
|
||||
#endif
|
||||
|
||||
__device__ unsigned int retirementCount = 0;
|
||||
|
||||
template <class Iterator>
|
||||
@ -19,7 +26,12 @@ template <class Iterator>
|
||||
void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) {
|
||||
|
||||
int device;
|
||||
#ifdef GRID_CUDA
|
||||
cudaGetDevice(&device);
|
||||
#endif
|
||||
#ifdef GRID_HIP
|
||||
hipGetDevice(&device);
|
||||
#endif
|
||||
|
||||
Iterator warpSize = gpu_props[device].warpSize;
|
||||
Iterator sharedMemPerBlock = gpu_props[device].sharedMemPerBlock;
|
||||
@ -53,7 +65,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
|
||||
|
||||
// cannot use overloaded operators for sobj as they are not volatile-qualified
|
||||
memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj));
|
||||
__syncwarp();
|
||||
acceleratorSynchronise();
|
||||
|
||||
const Iterator VEC = WARP_SIZE;
|
||||
const Iterator vid = tid & (VEC-1);
|
||||
@ -67,9 +79,9 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
|
||||
beta += temp;
|
||||
memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj));
|
||||
}
|
||||
__syncwarp();
|
||||
acceleratorSynchronise();
|
||||
}
|
||||
__syncthreads();
|
||||
acceleratorSynchroniseAll();
|
||||
|
||||
if (threadIdx.x == 0) {
|
||||
beta = Zero();
|
||||
@ -79,7 +91,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid
|
||||
}
|
||||
memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj));
|
||||
}
|
||||
__syncthreads();
|
||||
acceleratorSynchroniseAll();
|
||||
}
|
||||
|
||||
|
||||
@ -147,7 +159,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) {
|
||||
sobj *smem = (sobj *)shmem_pointer;
|
||||
|
||||
// wait until all outstanding memory instructions in this thread are finished
|
||||
__threadfence();
|
||||
acceleratorFence();
|
||||
|
||||
if (tid==0) {
|
||||
unsigned int ticket = atomicInc(&retirementCount, gridDim.x);
|
||||
@ -156,8 +168,8 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) {
|
||||
}
|
||||
|
||||
// each thread must read the correct value of amLast
|
||||
__syncthreads();
|
||||
|
||||
acceleratorSynchroniseAll();
|
||||
|
||||
if (amLast) {
|
||||
// reduce buffer[0], ..., buffer[gridDim.x-1]
|
||||
Iterator i = tid;
|
||||
@ -199,13 +211,7 @@ inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites)
|
||||
sobj *buffer_v = &buffer[0];
|
||||
|
||||
reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size);
|
||||
cudaDeviceSynchronize();
|
||||
|
||||
cudaError err = cudaGetLastError();
|
||||
if ( cudaSuccess != err ) {
|
||||
printf("Cuda error %s\n",cudaGetErrorString( err ));
|
||||
exit(0);
|
||||
}
|
||||
accelerator_barrier();
|
||||
auto result = buffer_v[0];
|
||||
return result;
|
||||
}
|
||||
|
@ -375,7 +375,7 @@ public:
|
||||
int osites = _grid->oSites(); // guaranteed to be <= l.Grid()->oSites() by a factor multiplicity
|
||||
int words = sizeof(scalar_object) / sizeof(scalar_type);
|
||||
|
||||
auto l_v = l.View();
|
||||
autoView(l_v, l, CpuWrite);
|
||||
thread_for( ss, osites, {
|
||||
ExtractBuffer<scalar_object> buf(Nsimd);
|
||||
for (int m = 0; m < multiplicity; m++) { // Draw from same generator multiplicity times
|
||||
@ -461,8 +461,8 @@ public:
|
||||
}
|
||||
|
||||
{
|
||||
// Obtain one reseeded generator per thread
|
||||
int Nthread = GridThread::GetThreads();
|
||||
// Obtain one reseeded generator per thread
|
||||
int Nthread = 32; // Hardwire a good level or parallelism
|
||||
std::vector<RngEngine> seeders(Nthread);
|
||||
for(int t=0;t<Nthread;t++){
|
||||
seeders[t] = Reseed(master_engine);
|
||||
|
@ -37,17 +37,19 @@ NAMESPACE_BEGIN(Grid);
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Trace
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
/*
|
||||
template<class vobj>
|
||||
inline auto trace(const Lattice<vobj> &lhs) -> Lattice<decltype(trace(vobj()))>
|
||||
{
|
||||
Lattice<decltype(trace(vobj()))> ret(lhs.Grid());
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView(ret_v , ret, AcceleratorWrite);
|
||||
autoView(lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
|
||||
coalescedWrite(ret_v[ss], trace(lhs_v(ss)));
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
*/
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Trace Index level dependent operation
|
||||
@ -56,8 +58,8 @@ template<int Index,class vobj>
|
||||
inline auto TraceIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(traceIndex<Index>(vobj()))>
|
||||
{
|
||||
Lattice<decltype(traceIndex<Index>(vobj()))> ret(lhs.Grid());
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v , ret, AcceleratorWrite);
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), {
|
||||
coalescedWrite(ret_v[ss], traceIndex<Index>(lhs_v(ss)));
|
||||
});
|
||||
|
@ -6,6 +6,7 @@
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Peter Boyle <paboyle@ph.ed.ac.uk>
|
||||
Author: Christoph Lehner <christoph@lhnr.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
@ -46,11 +47,12 @@ inline void subdivides(GridBase *coarse,GridBase *fine)
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// remove and insert a half checkerboard
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full){
|
||||
template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full)
|
||||
{
|
||||
half.Checkerboard() = cb;
|
||||
|
||||
auto half_v = half.View();
|
||||
auto full_v = full.View();
|
||||
autoView( half_v, half, CpuWrite);
|
||||
autoView( full_v, full, CpuRead);
|
||||
thread_for(ss, full.Grid()->oSites(),{
|
||||
int cbos;
|
||||
Coordinate coor;
|
||||
@ -63,10 +65,11 @@ template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,con
|
||||
}
|
||||
});
|
||||
}
|
||||
template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half){
|
||||
template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half)
|
||||
{
|
||||
int cb = half.Checkerboard();
|
||||
auto half_v = half.View();
|
||||
auto full_v = full.View();
|
||||
autoView( half_v , half, CpuRead);
|
||||
autoView( full_v , full, CpuWrite);
|
||||
thread_for(ss,full.Grid()->oSites(),{
|
||||
|
||||
Coordinate coor;
|
||||
@ -81,96 +84,147 @@ template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Latti
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex,int nbasis>
|
||||
inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
const Lattice<vobj> &fineData,
|
||||
const std::vector<Lattice<vobj> > &Basis)
|
||||
{
|
||||
GridBase * fine = fineData.Grid();
|
||||
GridBase * coarse= coarseData.Grid();
|
||||
|
||||
Lattice<CComplex> ip(coarse);
|
||||
|
||||
// auto fineData_ = fineData.View();
|
||||
auto coarseData_ = coarseData.View();
|
||||
auto ip_ = ip.View();
|
||||
for(int v=0;v<nbasis;v++) {
|
||||
blockInnerProduct(ip,Basis[v],fineData);
|
||||
accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), {
|
||||
coalescedWrite(coarseData_[sc](v),ip_(sc));
|
||||
});
|
||||
}
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Flexible Type Conversion for internal promotion to double as well as graceful
|
||||
// treatment of scalar-compatible types
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
accelerator_inline void convertType(ComplexD & out, const std::complex<double> & in) {
|
||||
out = in;
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex,int nbasis>
|
||||
inline void blockProject1(Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
const Lattice<vobj> &fineData,
|
||||
const std::vector<Lattice<vobj> > &Basis)
|
||||
{
|
||||
typedef iVector<CComplex,nbasis > coarseSiteData;
|
||||
coarseSiteData elide;
|
||||
typedef decltype(coalescedRead(elide)) ScalarComplex;
|
||||
GridBase * fine = fineData.Grid();
|
||||
GridBase * coarse= coarseData.Grid();
|
||||
int _ndimension = coarse->_ndimension;
|
||||
accelerator_inline void convertType(ComplexF & out, const std::complex<float> & in) {
|
||||
out = in;
|
||||
}
|
||||
|
||||
// checks
|
||||
assert( nbasis == Basis.size() );
|
||||
subdivides(coarse,fine);
|
||||
for(int i=0;i<nbasis;i++){
|
||||
conformable(Basis[i],fineData);
|
||||
}
|
||||
template<typename T>
|
||||
accelerator_inline EnableIf<isGridFundamental<T>> convertType(T & out, const T & in) {
|
||||
out = in;
|
||||
}
|
||||
|
||||
Coordinate block_r (_ndimension);
|
||||
|
||||
for(int d=0 ; d<_ndimension;d++){
|
||||
block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
|
||||
assert(block_r[d]*coarse->_rdimensions[d] == fine->_rdimensions[d]);
|
||||
}
|
||||
int blockVol = fine->oSites()/coarse->oSites();
|
||||
// This would allow for conversions between GridFundamental types, but is not strictly needed as yet
|
||||
/*template<typename T1, typename T2>
|
||||
accelerator_inline typename std::enable_if<isGridFundamental<T1>::value && isGridFundamental<T2>::value>::type
|
||||
// Or to make this very broad, conversions between anything that's not a GridTensor could be allowed
|
||||
//accelerator_inline typename std::enable_if<!isGridTensor<T1>::value && !isGridTensor<T2>::value>::type
|
||||
convertType(T1 & out, const T2 & in) {
|
||||
out = in;
|
||||
}*/
|
||||
|
||||
coarseData=Zero();
|
||||
#ifdef GRID_SIMT
|
||||
accelerator_inline void convertType(vComplexF & out, const ComplexF & in) {
|
||||
((ComplexF*)&out)[acceleratorSIMTlane(vComplexF::Nsimd())] = in;
|
||||
}
|
||||
accelerator_inline void convertType(vComplexD & out, const ComplexD & in) {
|
||||
((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd())] = in;
|
||||
}
|
||||
accelerator_inline void convertType(vComplexD2 & out, const ComplexD & in) {
|
||||
((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd()*2)] = in;
|
||||
}
|
||||
#endif
|
||||
|
||||
auto fineData_ = fineData.View();
|
||||
auto coarseData_ = coarseData.View();
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// To make this lock free, loop over coars parallel, and then loop over fine associated with coarse.
|
||||
// Otherwise do fine inner product per site, and make the update atomic
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
accelerator_for( sci, nbasis*coarse->oSites(), vobj::Nsimd(), {
|
||||
accelerator_inline void convertType(vComplexF & out, const vComplexD2 & in) {
|
||||
out.v = Optimization::PrecisionChange::DtoS(in._internal[0].v,in._internal[1].v);
|
||||
}
|
||||
|
||||
auto sc=sci/nbasis;
|
||||
auto i=sci%nbasis;
|
||||
auto Basis_ = Basis[i].View();
|
||||
accelerator_inline void convertType(vComplexD2 & out, const vComplexF & in) {
|
||||
Optimization::PrecisionChange::StoD(in.v,out._internal[0].v,out._internal[1].v);
|
||||
}
|
||||
|
||||
Coordinate coor_c(_ndimension);
|
||||
Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions); // Block coordinate
|
||||
template<typename T1,typename T2>
|
||||
accelerator_inline void convertType(iScalar<T1> & out, const iScalar<T2> & in) {
|
||||
convertType(out._internal,in._internal);
|
||||
}
|
||||
|
||||
int sf;
|
||||
decltype(innerProduct(Basis_(sf),fineData_(sf))) reduce=Zero();
|
||||
template<typename T1,typename T2>
|
||||
accelerator_inline NotEnableIf<isGridScalar<T1>> convertType(T1 & out, const iScalar<T2> & in) {
|
||||
convertType(out,in._internal);
|
||||
}
|
||||
|
||||
for(int sb=0;sb<blockVol;sb++){
|
||||
template<typename T1,typename T2>
|
||||
accelerator_inline NotEnableIf<isGridScalar<T2>> convertType(iScalar<T1> & out, const T2 & in) {
|
||||
convertType(out._internal,in);
|
||||
}
|
||||
|
||||
Coordinate coor_b(_ndimension);
|
||||
Coordinate coor_f(_ndimension);
|
||||
template<typename T1,typename T2,int N>
|
||||
accelerator_inline void convertType(iMatrix<T1,N> & out, const iMatrix<T2,N> & in) {
|
||||
for (int i=0;i<N;i++)
|
||||
for (int j=0;j<N;j++)
|
||||
convertType(out._internal[i][j],in._internal[i][j]);
|
||||
}
|
||||
|
||||
Lexicographic::CoorFromIndex(coor_b,sb,block_r);
|
||||
for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d]+coor_b[d];
|
||||
Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions);
|
||||
|
||||
reduce=reduce+innerProduct(Basis_(sf),fineData_(sf));
|
||||
}
|
||||
coalescedWrite(coarseData_[sc](i),reduce);
|
||||
template<typename T1,typename T2,int N>
|
||||
accelerator_inline void convertType(iVector<T1,N> & out, const iVector<T2,N> & in) {
|
||||
for (int i=0;i<N;i++)
|
||||
convertType(out._internal[i],in._internal[i]);
|
||||
}
|
||||
|
||||
template<typename T1,typename T2>
|
||||
accelerator_inline void convertType(Lattice<T1> & out, const Lattice<T2> & in) {
|
||||
autoView( out_v , out,AcceleratorWrite);
|
||||
autoView( in_v , in ,AcceleratorRead);
|
||||
accelerator_for(ss,out_v.size(),T1::Nsimd(),{
|
||||
convertType(out_v[ss],in_v(ss));
|
||||
});
|
||||
return;
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex>
|
||||
inline void blockZAXPY(Lattice<vobj> &fineZ,
|
||||
const Lattice<CComplex> &coarseA,
|
||||
const Lattice<vobj> &fineX,
|
||||
const Lattice<vobj> &fineY)
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// precision-promoted local inner product
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class vobj>
|
||||
inline auto localInnerProductD(const Lattice<vobj> &lhs,const Lattice<vobj> &rhs)
|
||||
-> Lattice<iScalar<decltype(TensorRemove(innerProductD2(lhs.View(CpuRead)[0],rhs.View(CpuRead)[0])))>>
|
||||
{
|
||||
autoView( lhs_v , lhs, AcceleratorRead);
|
||||
autoView( rhs_v , rhs, AcceleratorRead);
|
||||
|
||||
typedef decltype(TensorRemove(innerProductD2(lhs_v[0],rhs_v[0]))) t_inner;
|
||||
Lattice<iScalar<t_inner>> ret(lhs.Grid());
|
||||
|
||||
{
|
||||
autoView(ret_v, ret,AcceleratorWrite);
|
||||
accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{
|
||||
convertType(ret_v[ss],innerProductD2(lhs_v(ss),rhs_v(ss)));
|
||||
});
|
||||
}
|
||||
return ret;
|
||||
}
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// block routines
|
||||
////////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class vobj,class CComplex,int nbasis,class VLattice>
|
||||
inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
const Lattice<vobj> &fineData,
|
||||
const VLattice &Basis)
|
||||
{
|
||||
GridBase * fine = fineData.Grid();
|
||||
GridBase * coarse= coarseData.Grid();
|
||||
|
||||
Lattice<iScalar<CComplex>> ip(coarse);
|
||||
Lattice<vobj> fineDataRed = fineData;
|
||||
|
||||
autoView( coarseData_ , coarseData, AcceleratorWrite);
|
||||
autoView( ip_ , ip, AcceleratorWrite);
|
||||
for(int v=0;v<nbasis;v++) {
|
||||
blockInnerProductD(ip,Basis[v],fineDataRed); // ip = <basis|fine>
|
||||
accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), {
|
||||
convertType(coarseData_[sc](v),ip_[sc]);
|
||||
});
|
||||
|
||||
// improve numerical stability of projection
|
||||
// |fine> = |fine> - <basis|fine> |basis>
|
||||
ip=-ip;
|
||||
blockZAXPY(fineDataRed,ip,Basis[v],fineDataRed);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
template<class vobj,class vobj2,class CComplex>
|
||||
inline void blockZAXPY(Lattice<vobj> &fineZ,
|
||||
const Lattice<CComplex> &coarseA,
|
||||
const Lattice<vobj2> &fineX,
|
||||
const Lattice<vobj> &fineY)
|
||||
{
|
||||
GridBase * fine = fineZ.Grid();
|
||||
GridBase * coarse= coarseA.Grid();
|
||||
@ -182,7 +236,7 @@ inline void blockZAXPY(Lattice<vobj> &fineZ,
|
||||
conformable(fineX,fineZ);
|
||||
|
||||
int _ndimension = coarse->_ndimension;
|
||||
|
||||
|
||||
Coordinate block_r (_ndimension);
|
||||
|
||||
// FIXME merge with subdivide checking routine as this is redundant
|
||||
@ -191,29 +245,68 @@ inline void blockZAXPY(Lattice<vobj> &fineZ,
|
||||
assert(block_r[d]*coarse->_rdimensions[d]==fine->_rdimensions[d]);
|
||||
}
|
||||
|
||||
auto fineZ_ = fineZ.View();
|
||||
auto fineX_ = fineX.View();
|
||||
auto fineY_ = fineY.View();
|
||||
auto coarseA_= coarseA.View();
|
||||
autoView( fineZ_ , fineZ, AcceleratorWrite);
|
||||
autoView( fineX_ , fineX, AcceleratorRead);
|
||||
autoView( fineY_ , fineY, AcceleratorRead);
|
||||
autoView( coarseA_, coarseA, AcceleratorRead);
|
||||
Coordinate fine_rdimensions = fine->_rdimensions;
|
||||
Coordinate coarse_rdimensions = coarse->_rdimensions;
|
||||
|
||||
accelerator_for(sf, fine->oSites(), CComplex::Nsimd(), {
|
||||
|
||||
int sc;
|
||||
Coordinate coor_c(_ndimension);
|
||||
Coordinate coor_f(_ndimension);
|
||||
|
||||
Lexicographic::CoorFromIndex(coor_f,sf,fine->_rdimensions);
|
||||
for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d];
|
||||
Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions);
|
||||
int sc;
|
||||
Coordinate coor_c(_ndimension);
|
||||
Coordinate coor_f(_ndimension);
|
||||
|
||||
// z = A x + y
|
||||
coalescedWrite(fineZ_[sf],coarseA_(sc)*fineX_(sf)+fineY_(sf));
|
||||
Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions);
|
||||
for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d];
|
||||
Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions);
|
||||
|
||||
});
|
||||
// z = A x + y
|
||||
#ifdef GRID_SIMT
|
||||
typename vobj2::tensor_reduced::scalar_object cA;
|
||||
typename vobj::scalar_object cAx;
|
||||
#else
|
||||
typename vobj2::tensor_reduced cA;
|
||||
vobj cAx;
|
||||
#endif
|
||||
convertType(cA,TensorRemove(coarseA_(sc)));
|
||||
auto prod = cA*fineX_(sf);
|
||||
convertType(cAx,prod);
|
||||
coalescedWrite(fineZ_[sf],cAx+fineY_(sf));
|
||||
|
||||
});
|
||||
|
||||
return;
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex>
|
||||
inline void blockInnerProductD(Lattice<CComplex> &CoarseInner,
|
||||
const Lattice<vobj> &fineX,
|
||||
const Lattice<vobj> &fineY)
|
||||
{
|
||||
typedef iScalar<decltype(TensorRemove(innerProductD2(vobj(),vobj())))> dotp;
|
||||
|
||||
GridBase *coarse(CoarseInner.Grid());
|
||||
GridBase *fine (fineX.Grid());
|
||||
|
||||
Lattice<dotp> fine_inner(fine); fine_inner.Checkerboard() = fineX.Checkerboard();
|
||||
Lattice<dotp> coarse_inner(coarse);
|
||||
|
||||
// Precision promotion
|
||||
fine_inner = localInnerProductD<vobj>(fineX,fineY);
|
||||
blockSum(coarse_inner,fine_inner);
|
||||
{
|
||||
autoView( CoarseInner_ , CoarseInner,AcceleratorWrite);
|
||||
autoView( coarse_inner_ , coarse_inner,AcceleratorRead);
|
||||
accelerator_for(ss, coarse->oSites(), 1, {
|
||||
convertType(CoarseInner_[ss], TensorRemove(coarse_inner_[ss]));
|
||||
});
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex> // deprecate
|
||||
inline void blockInnerProduct(Lattice<CComplex> &CoarseInner,
|
||||
const Lattice<vobj> &fineX,
|
||||
const Lattice<vobj> &fineY)
|
||||
@ -227,15 +320,17 @@ inline void blockInnerProduct(Lattice<CComplex> &CoarseInner,
|
||||
Lattice<dotp> coarse_inner(coarse);
|
||||
|
||||
// Precision promotion?
|
||||
auto CoarseInner_ = CoarseInner.View();
|
||||
auto coarse_inner_ = coarse_inner.View();
|
||||
|
||||
fine_inner = localInnerProduct(fineX,fineY);
|
||||
blockSum(coarse_inner,fine_inner);
|
||||
accelerator_for(ss, coarse->oSites(), 1, {
|
||||
CoarseInner_[ss] = coarse_inner_[ss];
|
||||
});
|
||||
{
|
||||
autoView( CoarseInner_ , CoarseInner, AcceleratorWrite);
|
||||
autoView( coarse_inner_ , coarse_inner, AcceleratorRead);
|
||||
accelerator_for(ss, coarse->oSites(), 1, {
|
||||
CoarseInner_[ss] = coarse_inner_[ss];
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex>
|
||||
inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX)
|
||||
{
|
||||
@ -248,7 +343,7 @@ inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX)
|
||||
// useful in multigrid project;
|
||||
// Generic name : Coarsen?
|
||||
template<class vobj>
|
||||
inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
||||
inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
||||
{
|
||||
GridBase * fine = fineData.Grid();
|
||||
GridBase * coarse= coarseData.Grid();
|
||||
@ -256,9 +351,9 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
||||
subdivides(coarse,fine); // require they map
|
||||
|
||||
int _ndimension = coarse->_ndimension;
|
||||
|
||||
|
||||
Coordinate block_r (_ndimension);
|
||||
|
||||
|
||||
for(int d=0 ; d<_ndimension;d++){
|
||||
block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
|
||||
}
|
||||
@ -266,32 +361,36 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData)
|
||||
|
||||
// Turn this around to loop threaded over sc and interior loop
|
||||
// over sf would thread better
|
||||
auto coarseData_ = coarseData.View();
|
||||
auto fineData_ = fineData.View();
|
||||
autoView( coarseData_ , coarseData, AcceleratorWrite);
|
||||
autoView( fineData_ , fineData, AcceleratorRead);
|
||||
|
||||
Coordinate fine_rdimensions = fine->_rdimensions;
|
||||
Coordinate coarse_rdimensions = coarse->_rdimensions;
|
||||
|
||||
accelerator_for(sc,coarse->oSites(),1,{
|
||||
|
||||
// One thread per sub block
|
||||
Coordinate coor_c(_ndimension);
|
||||
Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions); // Block coordinate
|
||||
coarseData_[sc]=Zero();
|
||||
// One thread per sub block
|
||||
Coordinate coor_c(_ndimension);
|
||||
Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions); // Block coordinate
|
||||
coarseData_[sc]=Zero();
|
||||
|
||||
for(int sb=0;sb<blockVol;sb++){
|
||||
|
||||
int sf;
|
||||
Coordinate coor_b(_ndimension);
|
||||
Coordinate coor_f(_ndimension);
|
||||
Lexicographic::CoorFromIndex(coor_b,sb,block_r); // Block sub coordinate
|
||||
for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
|
||||
Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions);
|
||||
for(int sb=0;sb<blockVol;sb++){
|
||||
|
||||
coarseData_[sc]=coarseData_[sc]+fineData_[sf];
|
||||
}
|
||||
int sf;
|
||||
Coordinate coor_b(_ndimension);
|
||||
Coordinate coor_f(_ndimension);
|
||||
Lexicographic::CoorFromIndex(coor_b,sb,block_r); // Block sub coordinate
|
||||
for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d];
|
||||
Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions);
|
||||
|
||||
});
|
||||
coarseData_[sc]=coarseData_[sc]+fineData_[sf];
|
||||
}
|
||||
|
||||
});
|
||||
return;
|
||||
}
|
||||
|
||||
|
||||
template<class vobj>
|
||||
inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vobj> &picked,Coordinate coor)
|
||||
{
|
||||
@ -313,8 +412,8 @@ inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vob
|
||||
}
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex>
|
||||
inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis)
|
||||
template<class CComplex,class VLattice>
|
||||
inline void blockOrthonormalize(Lattice<CComplex> &ip,VLattice &Basis)
|
||||
{
|
||||
GridBase *coarse = ip.Grid();
|
||||
GridBase *fine = Basis[0].Grid();
|
||||
@ -322,23 +421,30 @@ inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> >
|
||||
int nbasis = Basis.size() ;
|
||||
|
||||
// checks
|
||||
subdivides(coarse,fine);
|
||||
subdivides(coarse,fine);
|
||||
for(int i=0;i<nbasis;i++){
|
||||
conformable(Basis[i].Grid(),fine);
|
||||
}
|
||||
|
||||
for(int v=0;v<nbasis;v++) {
|
||||
for(int u=0;u<v;u++) {
|
||||
//Inner product & remove component
|
||||
blockInnerProduct(ip,Basis[u],Basis[v]);
|
||||
//Inner product & remove component
|
||||
blockInnerProductD(ip,Basis[u],Basis[v]);
|
||||
ip = -ip;
|
||||
blockZAXPY<vobj,CComplex> (Basis[v],ip,Basis[u],Basis[v]);
|
||||
blockZAXPY(Basis[v],ip,Basis[u],Basis[v]);
|
||||
}
|
||||
blockNormalise(ip,Basis[v]);
|
||||
}
|
||||
}
|
||||
|
||||
template<class vobj,class CComplex>
|
||||
inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) // deprecated inaccurate naming
|
||||
{
|
||||
blockOrthonormalize(ip,Basis);
|
||||
}
|
||||
|
||||
#if 0
|
||||
// TODO: CPU optimized version here
|
||||
template<class vobj,class CComplex,int nbasis>
|
||||
inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
Lattice<vobj> &fineData,
|
||||
@ -360,8 +466,8 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
for(int d=0 ; d<_ndimension;d++){
|
||||
block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d];
|
||||
}
|
||||
auto fineData_ = fineData.View();
|
||||
auto coarseData_ = coarseData.View();
|
||||
autoView( fineData_ , fineData, AcceleratorWrite);
|
||||
autoView( coarseData_ , coarseData, AcceleratorRead);
|
||||
|
||||
// Loop with a cache friendly loop ordering
|
||||
accelerator_for(sf,fine->oSites(),1,{
|
||||
@ -374,7 +480,7 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions);
|
||||
|
||||
for(int i=0;i<nbasis;i++) {
|
||||
auto basis_ = Basis[i].View();
|
||||
/* auto basis_ = Basis[i], );*/
|
||||
if(i==0) fineData_[sf]=coarseData_[sc](i) *basis_[sf]);
|
||||
else fineData_[sf]=fineData_[sf]+coarseData_[sc](i)*basis_[sf]);
|
||||
}
|
||||
@ -383,24 +489,25 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
|
||||
}
|
||||
#else
|
||||
template<class vobj,class CComplex,int nbasis>
|
||||
template<class vobj,class CComplex,int nbasis,class VLattice>
|
||||
inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData,
|
||||
Lattice<vobj> &fineData,
|
||||
const std::vector<Lattice<vobj> > &Basis)
|
||||
const VLattice &Basis)
|
||||
{
|
||||
GridBase * fine = fineData.Grid();
|
||||
GridBase * coarse= coarseData.Grid();
|
||||
|
||||
fineData=Zero();
|
||||
for(int i=0;i<nbasis;i++) {
|
||||
Lattice<iScalar<CComplex> > ip = PeekIndex<0>(coarseData,i);
|
||||
Lattice<CComplex> cip(coarse);
|
||||
auto cip_ = cip.View();
|
||||
auto ip_ = ip.View();
|
||||
accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{
|
||||
coalescedWrite(cip_[sc], ip_(sc)());
|
||||
});
|
||||
blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData);
|
||||
|
||||
//Lattice<CComplex> cip(coarse);
|
||||
//autoView( cip_ , cip, AcceleratorWrite);
|
||||
//autoView( ip_ , ip, AcceleratorRead);
|
||||
//accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{
|
||||
// coalescedWrite(cip_[sc], ip_(sc)());
|
||||
// });
|
||||
//blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData);
|
||||
blockZAXPY(fineData,ip,Basis[i],fineData);
|
||||
}
|
||||
}
|
||||
#endif
|
||||
@ -427,15 +534,17 @@ void localConvert(const Lattice<vobj> &in,Lattice<vvobj> &out)
|
||||
assert(ig->lSites() == og->lSites());
|
||||
}
|
||||
|
||||
autoView(in_v,in,CpuRead);
|
||||
autoView(out_v,out,CpuWrite);
|
||||
thread_for(idx, ig->lSites(),{
|
||||
sobj s;
|
||||
ssobj ss;
|
||||
|
||||
Coordinate lcoor(ni);
|
||||
ig->LocalIndexToLocalCoor(idx,lcoor);
|
||||
peekLocalSite(s,in,lcoor);
|
||||
peekLocalSite(s,in_v,lcoor);
|
||||
ss=s;
|
||||
pokeLocalSite(ss,out,lcoor);
|
||||
pokeLocalSite(ss,out_v,lcoor);
|
||||
});
|
||||
}
|
||||
|
||||
@ -470,8 +579,9 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro
|
||||
Coordinate rdt = Tg->_rdimensions;
|
||||
Coordinate ist = Tg->_istride;
|
||||
Coordinate ost = Tg->_ostride;
|
||||
auto t_v = To.View();
|
||||
auto f_v = From.View();
|
||||
|
||||
autoView( t_v , To, AcceleratorWrite);
|
||||
autoView( f_v , From, AcceleratorRead);
|
||||
accelerator_for(idx,Fg->lSites(),1,{
|
||||
sobj s;
|
||||
Coordinate Fcoor(nd);
|
||||
@ -494,8 +604,6 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro
|
||||
for(int w=0;w<words;w++){
|
||||
tp[idx_t+w*Nsimd] = fp[idx_f+w*Nsimd]; // FIXME IF RRII layout, type pun no worke
|
||||
}
|
||||
// peekLocalSite(s,From,Fcoor);
|
||||
// pokeLocalSite(s,To ,Tcoor);
|
||||
}
|
||||
});
|
||||
}
|
||||
@ -526,6 +634,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice
|
||||
}
|
||||
|
||||
// the above should guarantee that the operations are local
|
||||
autoView(lowDimv,lowDim,CpuRead);
|
||||
autoView(higherDimv,higherDim,CpuWrite);
|
||||
thread_for(idx,lg->lSites(),{
|
||||
sobj s;
|
||||
Coordinate lcoor(nl);
|
||||
@ -538,8 +648,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice
|
||||
hcoor[d]=lcoor[ddl++];
|
||||
}
|
||||
}
|
||||
peekLocalSite(s,lowDim,lcoor);
|
||||
pokeLocalSite(s,higherDim,hcoor);
|
||||
peekLocalSite(s,lowDimv,lcoor);
|
||||
pokeLocalSite(s,higherDimv,hcoor);
|
||||
});
|
||||
}
|
||||
|
||||
@ -567,6 +677,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic
|
||||
}
|
||||
}
|
||||
// the above should guarantee that the operations are local
|
||||
autoView(lowDimv,lowDim,CpuWrite);
|
||||
autoView(higherDimv,higherDim,CpuRead);
|
||||
thread_for(idx,lg->lSites(),{
|
||||
sobj s;
|
||||
Coordinate lcoor(nl);
|
||||
@ -579,8 +691,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic
|
||||
hcoor[d]=lcoor[ddl++];
|
||||
}
|
||||
}
|
||||
peekLocalSite(s,higherDim,hcoor);
|
||||
pokeLocalSite(s,lowDim,lcoor);
|
||||
peekLocalSite(s,higherDimv,hcoor);
|
||||
pokeLocalSite(s,lowDimv,lcoor);
|
||||
});
|
||||
|
||||
}
|
||||
@ -608,6 +720,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int
|
||||
}
|
||||
|
||||
// the above should guarantee that the operations are local
|
||||
autoView(lowDimv,lowDim,CpuRead);
|
||||
autoView(higherDimv,higherDim,CpuWrite);
|
||||
thread_for(idx,lg->lSites(),{
|
||||
sobj s;
|
||||
Coordinate lcoor(nl);
|
||||
@ -616,8 +730,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int
|
||||
if( lcoor[orthog] == slice_lo ) {
|
||||
hcoor=lcoor;
|
||||
hcoor[orthog] = slice_hi;
|
||||
peekLocalSite(s,lowDim,lcoor);
|
||||
pokeLocalSite(s,higherDim,hcoor);
|
||||
peekLocalSite(s,lowDimv,lcoor);
|
||||
pokeLocalSite(s,higherDimv,hcoor);
|
||||
}
|
||||
});
|
||||
}
|
||||
@ -645,6 +759,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int
|
||||
}
|
||||
|
||||
// the above should guarantee that the operations are local
|
||||
autoView(lowDimv,lowDim,CpuWrite);
|
||||
autoView(higherDimv,higherDim,CpuRead);
|
||||
thread_for(idx,lg->lSites(),{
|
||||
sobj s;
|
||||
Coordinate lcoor(nl);
|
||||
@ -653,8 +769,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int
|
||||
if( lcoor[orthog] == slice_lo ) {
|
||||
hcoor=lcoor;
|
||||
hcoor[orthog] = slice_hi;
|
||||
peekLocalSite(s,higherDim,hcoor);
|
||||
pokeLocalSite(s,lowDim,lcoor);
|
||||
peekLocalSite(s,higherDimv,hcoor);
|
||||
pokeLocalSite(s,lowDimv,lcoor);
|
||||
}
|
||||
});
|
||||
}
|
||||
@ -718,7 +834,7 @@ unvectorizeToLexOrdArray(std::vector<sobj> &out, const Lattice<vobj> &in)
|
||||
}
|
||||
|
||||
//loop over outer index
|
||||
auto in_v = in.View();
|
||||
autoView( in_v , in, CpuRead);
|
||||
thread_for(in_oidx,in_grid->oSites(),{
|
||||
//Assemble vector of pointers to output elements
|
||||
ExtractPointerArray<sobj> out_ptrs(in_nsimd);
|
||||
@ -811,7 +927,7 @@ vectorizeFromLexOrdArray( std::vector<sobj> &in, Lattice<vobj> &out)
|
||||
icoor[lane].resize(ndim);
|
||||
grid->iCoorFromIindex(icoor[lane],lane);
|
||||
}
|
||||
auto out_v = out.View();
|
||||
autoView( out_v , out, CpuWrite);
|
||||
thread_for(oidx, grid->oSites(),{
|
||||
//Assemble vector of pointers to output elements
|
||||
ExtractPointerArray<sobj> ptrs(nsimd);
|
||||
@ -914,7 +1030,7 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in)
|
||||
std::vector<SobjOut> in_slex_conv(in_grid->lSites());
|
||||
unvectorizeToLexOrdArray(in_slex_conv, in);
|
||||
|
||||
auto out_v = out.View();
|
||||
autoView( out_v , out, CpuWrite);
|
||||
thread_for(out_oidx,out_grid->oSites(),{
|
||||
Coordinate out_ocoor(ndim);
|
||||
out_grid->oCoorFromOindex(out_ocoor, out_oidx);
|
||||
|
@ -38,17 +38,19 @@ NAMESPACE_BEGIN(Grid);
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Transpose
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
/*
|
||||
template<class vobj>
|
||||
inline Lattice<vobj> transpose(const Lattice<vobj> &lhs){
|
||||
Lattice<vobj> ret(lhs.Grid());
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(ret_v[ss], transpose(lhs_v(ss)));
|
||||
});
|
||||
return ret;
|
||||
};
|
||||
|
||||
*/
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Index level dependent transpose
|
||||
////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
@ -56,8 +58,8 @@ template<int Index,class vobj>
|
||||
inline auto TransposeIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(transposeIndex<Index>(vobj()))>
|
||||
{
|
||||
Lattice<decltype(transposeIndex<Index>(vobj()))> ret(lhs.Grid());
|
||||
auto ret_v = ret.View();
|
||||
auto lhs_v = lhs.View();
|
||||
autoView( ret_v, ret, AcceleratorWrite);
|
||||
autoView( lhs_v, lhs, AcceleratorRead);
|
||||
accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{
|
||||
coalescedWrite(ret_v[ss] , transposeIndex<Index>(lhs_v(ss)));
|
||||
});
|
||||
|
@ -35,8 +35,8 @@ NAMESPACE_BEGIN(Grid);
|
||||
|
||||
template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){
|
||||
Lattice<obj> ret_i(rhs_i.Grid());
|
||||
auto rhs = rhs_i.View();
|
||||
auto ret = ret_i.View();
|
||||
autoView( rhs, rhs_i, AcceleratorRead);
|
||||
autoView( ret, ret_i, AcceleratorWrite);
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
accelerator_for(ss,rhs.size(),1,{
|
||||
ret[ss]=pow(rhs[ss],y);
|
||||
@ -45,8 +45,8 @@ template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){
|
||||
}
|
||||
template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){
|
||||
Lattice<obj> ret_i(rhs_i.Grid());
|
||||
auto rhs = rhs_i.View();
|
||||
auto ret = ret_i.View();
|
||||
autoView( rhs , rhs_i, AcceleratorRead);
|
||||
autoView( ret , ret_i, AcceleratorWrite);
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
accelerator_for(ss,rhs.size(),obj::Nsimd(),{
|
||||
coalescedWrite(ret[ss],mod(rhs(ss),y));
|
||||
@ -56,8 +56,8 @@ template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){
|
||||
|
||||
template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){
|
||||
Lattice<obj> ret_i(rhs_i.Grid());
|
||||
auto ret = ret_i.View();
|
||||
auto rhs = rhs_i.View();
|
||||
autoView( ret , ret_i, AcceleratorWrite);
|
||||
autoView( rhs , rhs_i, AcceleratorRead);
|
||||
ret.Checkerboard() = rhs_i.Checkerboard();
|
||||
accelerator_for(ss,rhs.size(),obj::Nsimd(),{
|
||||
coalescedWrite(ret[ss],div(rhs(ss),y));
|
||||
@ -67,8 +67,8 @@ template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){
|
||||
|
||||
template<class obj> Lattice<obj> expMat(const Lattice<obj> &rhs_i, RealD alpha, Integer Nexp = DEFAULT_MAT_EXP){
|
||||
Lattice<obj> ret_i(rhs_i.Grid());
|
||||
auto rhs = rhs_i.View();
|
||||
auto ret = ret_i.View();
|
||||
autoView( rhs , rhs_i, AcceleratorRead);
|
||||
autoView( ret , ret_i, AcceleratorWrite);
|
||||
ret.Checkerboard() = rhs.Checkerboard();
|
||||
accelerator_for(ss,rhs.size(),obj::Nsimd(),{
|
||||
coalescedWrite(ret[ss],Exponentiate(rhs(ss),alpha, Nexp));
|
||||
|
173
Grid/lattice/Lattice_view.h
Normal file
173
Grid/lattice/Lattice_view.h
Normal file
@ -0,0 +1,173 @@
|
||||
#pragma once
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
///////////////////////////////////////////////////////////////////
|
||||
// Base class which can be used by traits to pick up behaviour
|
||||
///////////////////////////////////////////////////////////////////
|
||||
class LatticeBase {};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Conformable checks; same instance of Grid required
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
void accelerator_inline conformable(GridBase *lhs,GridBase *rhs)
|
||||
{
|
||||
assert(lhs == rhs);
|
||||
}
|
||||
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Minimal base class containing only data valid to access from accelerator
|
||||
// _odata will be a managed pointer in CUDA
|
||||
////////////////////////////////////////////////////////////////////////////
|
||||
// Force access to lattice through a view object.
|
||||
// prevents writing of code that will not offload to GPU, but perhaps annoyingly
|
||||
// strict since host could could in principle direct access through the lattice object
|
||||
// Need to decide programming model.
|
||||
#define LATTICE_VIEW_STRICT
|
||||
template<class vobj> class LatticeAccelerator : public LatticeBase
|
||||
{
|
||||
protected:
|
||||
//public:
|
||||
GridBase *_grid;
|
||||
int checkerboard;
|
||||
vobj *_odata; // A managed pointer
|
||||
uint64_t _odata_size;
|
||||
ViewAdvise advise;
|
||||
public:
|
||||
accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr), advise(AdviseDefault) { };
|
||||
accelerator_inline uint64_t oSites(void) const { return _odata_size; };
|
||||
accelerator_inline int Checkerboard(void) const { return checkerboard; };
|
||||
accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view
|
||||
accelerator_inline ViewAdvise Advise(void) const { return advise; };
|
||||
accelerator_inline ViewAdvise &Advise(void) { return this->advise; }; // can assign advise on a container, not a view
|
||||
accelerator_inline void Conformable(GridBase * &grid) const
|
||||
{
|
||||
if (grid) conformable(grid, _grid);
|
||||
else grid = _grid;
|
||||
};
|
||||
// Host only
|
||||
GridBase * getGrid(void) const { return _grid; };
|
||||
};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// A View class which provides accessor to the data.
|
||||
// This will be safe to call from accelerator_for and is trivially copy constructible
|
||||
// The copy constructor for this will need to be used by device lambda functions
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
template<class vobj>
|
||||
class LatticeView : public LatticeAccelerator<vobj>
|
||||
{
|
||||
public:
|
||||
// Rvalue
|
||||
ViewMode mode;
|
||||
void * cpu_ptr;
|
||||
#ifdef GRID_SIMT
|
||||
accelerator_inline const typename vobj::scalar_object operator()(size_t i) const {
|
||||
return coalescedRead(this->_odata[i]);
|
||||
}
|
||||
#else
|
||||
accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; }
|
||||
#endif
|
||||
|
||||
#if 1
|
||||
// accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; };
|
||||
accelerator_inline vobj & operator[](size_t i) const { return this->_odata[i]; };
|
||||
#else
|
||||
accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; };
|
||||
accelerator_inline vobj & operator[](size_t i) { return this->_odata[i]; };
|
||||
#endif
|
||||
|
||||
accelerator_inline uint64_t begin(void) const { return 0;};
|
||||
accelerator_inline uint64_t end(void) const { return this->_odata_size; };
|
||||
accelerator_inline uint64_t size(void) const { return this->_odata_size; };
|
||||
|
||||
LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me){}
|
||||
LatticeView(const LatticeView<vobj> &refer_to_me) = default; // Trivially copyable
|
||||
LatticeView(const LatticeAccelerator<vobj> &refer_to_me,ViewMode mode) : LatticeAccelerator<vobj> (refer_to_me)
|
||||
{
|
||||
this->ViewOpen(mode);
|
||||
}
|
||||
|
||||
// Host functions
|
||||
void ViewOpen(ViewMode mode)
|
||||
{ // Translate the pointer, could save a copy. Could use a "Handle" and not save _odata originally in base
|
||||
// std::cout << "View Open"<<std::hex<<this->_odata<<std::dec <<std::endl;
|
||||
this->cpu_ptr = (void *)this->_odata;
|
||||
this->mode = mode;
|
||||
this->_odata =(vobj *)
|
||||
MemoryManager::ViewOpen(this->cpu_ptr,
|
||||
this->_odata_size*sizeof(vobj),
|
||||
mode,
|
||||
this->advise);
|
||||
}
|
||||
void ViewClose(void)
|
||||
{ // Inform the manager
|
||||
// std::cout << "View Close"<<std::hex<<this->cpu_ptr<<std::dec <<std::endl;
|
||||
MemoryManager::ViewClose(this->cpu_ptr,this->mode);
|
||||
}
|
||||
|
||||
};
|
||||
// Little autoscope assister
|
||||
template<class View>
|
||||
class ViewCloser
|
||||
{
|
||||
View v; // Take a copy of view and call view close when I go out of scope automatically
|
||||
public:
|
||||
ViewCloser(View &_v) : v(_v) {};
|
||||
~ViewCloser() { v.ViewClose(); }
|
||||
};
|
||||
|
||||
#define autoView(l_v,l,mode) \
|
||||
auto l_v = l.View(mode); \
|
||||
ViewCloser<decltype(l_v)> _autoView##l_v(l_v);
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Lattice expression types used by ET to assemble the AST
|
||||
//
|
||||
// Need to be able to detect code paths according to the whether a lattice object or not
|
||||
// so introduce some trait type things
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
class LatticeExpressionBase {};
|
||||
|
||||
template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>;
|
||||
template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >;
|
||||
|
||||
template<class T, bool isLattice> struct ViewMapBase { typedef T Type; };
|
||||
template<class T> struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; };
|
||||
template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >;
|
||||
|
||||
template <typename Op, typename _T1>
|
||||
class LatticeUnaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {};
|
||||
};
|
||||
|
||||
template <typename Op, typename _T1, typename _T2>
|
||||
class LatticeBinaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
typedef typename ViewMap<_T2>::Type T2;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
T2 arg2;
|
||||
LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {};
|
||||
};
|
||||
|
||||
template <typename Op, typename _T1, typename _T2, typename _T3>
|
||||
class LatticeTrinaryExpression : public LatticeExpressionBase
|
||||
{
|
||||
public:
|
||||
typedef typename ViewMap<_T1>::Type T1;
|
||||
typedef typename ViewMap<_T2>::Type T2;
|
||||
typedef typename ViewMap<_T3>::Type T3;
|
||||
Op op;
|
||||
T1 arg1;
|
||||
T2 arg2;
|
||||
T3 arg3;
|
||||
LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {};
|
||||
};
|
||||
NAMESPACE_END(Grid);
|
@ -43,7 +43,7 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice<
|
||||
conformable(iftrue,predicate);
|
||||
conformable(iftrue,ret);
|
||||
|
||||
GridBase *grid=iftrue._grid;
|
||||
GridBase *grid=iftrue.Grid();
|
||||
|
||||
typedef typename vobj::scalar_object scalar_object;
|
||||
typedef typename vobj::scalar_type scalar_type;
|
||||
@ -52,22 +52,23 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice<
|
||||
|
||||
const int Nsimd = grid->Nsimd();
|
||||
|
||||
std::vector<Integer> mask(Nsimd);
|
||||
std::vector<scalar_object> truevals (Nsimd);
|
||||
std::vector<scalar_object> falsevals(Nsimd);
|
||||
|
||||
parallel_for(int ss=0;ss<iftrue._grid->oSites(); ss++){
|
||||
|
||||
extract(iftrue._odata[ss] ,truevals);
|
||||
extract(iffalse._odata[ss] ,falsevals);
|
||||
extract<vInteger,Integer>(TensorRemove(predicate._odata[ss]),mask);
|
||||
|
||||
for(int s=0;s<Nsimd;s++){
|
||||
if (mask[s]) falsevals[s]=truevals[s];
|
||||
autoView(iftrue_v,iftrue,CpuRead);
|
||||
autoView(iffalse_v,iffalse,CpuRead);
|
||||
autoView(predicate_v,predicate,CpuRead);
|
||||
autoView(ret_v,ret,CpuWrite);
|
||||
Integer NN= grid->oSites();
|
||||
thread_for(ss,NN,{
|
||||
Integer mask;
|
||||
scalar_object trueval;
|
||||
scalar_object falseval;
|
||||
for(int l=0;l<Nsimd;l++){
|
||||
trueval =extractLane(l,iftrue_v[ss]);
|
||||
falseval=extractLane(l,iffalse_v[ss]);
|
||||
mask =extractLane(l,predicate_v[ss]);
|
||||
if (mask) falseval=trueval;
|
||||
insertLane(l,ret_v[ss],falseval);
|
||||
}
|
||||
|
||||
merge(ret._odata[ss],falsevals);
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<class vobj,class iobj>
|
||||
@ -76,9 +77,9 @@ inline Lattice<vobj> whereWolf(const Lattice<iobj> &predicate,Lattice<vobj> &ift
|
||||
conformable(iftrue,iffalse);
|
||||
conformable(iftrue,predicate);
|
||||
|
||||
Lattice<vobj> ret(iftrue._grid);
|
||||
Lattice<vobj> ret(iftrue.Grid());
|
||||
|
||||
where(ret,predicate,iftrue,iffalse);
|
||||
whereWolf(ret,predicate,iftrue,iffalse);
|
||||
|
||||
return ret;
|
||||
}
|
||||
|
@ -130,6 +130,8 @@ public:
|
||||
friend std::ostream& operator<< (std::ostream& stream, Logger& log){
|
||||
|
||||
if ( log.active ) {
|
||||
std::ios_base::fmtflags f(stream.flags());
|
||||
|
||||
stream << log.background()<< std::left;
|
||||
if (log.topWidth > 0)
|
||||
{
|
||||
@ -152,6 +154,8 @@ public:
|
||||
<< now << log.background() << " : " ;
|
||||
}
|
||||
stream << log.colour();
|
||||
stream.flags(f);
|
||||
|
||||
return stream;
|
||||
} else {
|
||||
return devnull;
|
||||
|
@ -1,3 +1,4 @@
|
||||
#include <Grid/GridCore.h>
|
||||
|
||||
int Grid::BinaryIO::latticeWriteMaxRetry = -1;
|
||||
int Grid::BinaryIO::latticeWriteMaxRetry = -1;
|
||||
Grid::BinaryIO::IoPerf Grid::BinaryIO::lastPerf;
|
||||
|
@ -79,6 +79,13 @@ inline void removeWhitespace(std::string &key)
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
class BinaryIO {
|
||||
public:
|
||||
struct IoPerf
|
||||
{
|
||||
uint64_t size{0},time{0};
|
||||
double mbytesPerSecond{0.};
|
||||
};
|
||||
|
||||
static IoPerf lastPerf;
|
||||
static int latticeWriteMaxRetry;
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////
|
||||
@ -341,7 +348,7 @@ class BinaryIO {
|
||||
int ieee32big = (format == std::string("IEEE32BIG"));
|
||||
int ieee32 = (format == std::string("IEEE32"));
|
||||
int ieee64big = (format == std::string("IEEE64BIG"));
|
||||
int ieee64 = (format == std::string("IEEE64"));
|
||||
int ieee64 = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE"));
|
||||
assert(ieee64||ieee32|ieee64big||ieee32big);
|
||||
assert((ieee64+ieee32+ieee64big+ieee32big)==1);
|
||||
//////////////////////////////////////////////////////////////////////////////
|
||||
@ -502,12 +509,15 @@ class BinaryIO {
|
||||
timer.Stop();
|
||||
}
|
||||
|
||||
lastPerf.size = sizeof(fobj)*iodata.size()*nrank;
|
||||
lastPerf.time = timer.useconds();
|
||||
lastPerf.mbytesPerSecond = lastPerf.size/1024./1024./(lastPerf.time/1.0e6);
|
||||
std::cout<<GridLogMessage<<"IOobject: ";
|
||||
if ( control & BINARYIO_READ) std::cout << " read ";
|
||||
else std::cout << " write ";
|
||||
uint64_t bytes = sizeof(fobj)*iodata.size()*nrank;
|
||||
std::cout<< bytes <<" bytes in "<<timer.Elapsed() <<" "
|
||||
<< (double)bytes/ (double)timer.useconds() <<" MB/s "<<std::endl;
|
||||
std::cout<< lastPerf.size <<" bytes in "<< timer.Elapsed() <<" "
|
||||
<< lastPerf.mbytesPerSecond <<" MB/s "<<std::endl;
|
||||
|
||||
std::cout<<GridLogMessage<<"IOobject: endian and checksum overhead "<<bstimer.Elapsed() <<std::endl;
|
||||
|
||||
@ -663,10 +673,15 @@ class BinaryIO {
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
|
||||
timer.Start();
|
||||
thread_for(lidx,lsites,{
|
||||
thread_for(lidx,lsites,{ // FIX ME, suboptimal implementation
|
||||
std::vector<RngStateType> tmp(RngStateCount);
|
||||
std::copy(iodata[lidx].begin(),iodata[lidx].end(),tmp.begin());
|
||||
parallel_rng.SetState(tmp,lidx);
|
||||
Coordinate lcoor;
|
||||
grid->LocalIndexToLocalCoor(lidx, lcoor);
|
||||
int o_idx=grid->oIndex(lcoor);
|
||||
int i_idx=grid->iIndex(lcoor);
|
||||
int gidx=parallel_rng.generator_idx(o_idx,i_idx);
|
||||
parallel_rng.SetState(tmp,gidx);
|
||||
});
|
||||
timer.Stop();
|
||||
|
||||
@ -723,7 +738,12 @@ class BinaryIO {
|
||||
std::vector<RNGstate> iodata(lsites);
|
||||
thread_for(lidx,lsites,{
|
||||
std::vector<RngStateType> tmp(RngStateCount);
|
||||
parallel_rng.GetState(tmp,lidx);
|
||||
Coordinate lcoor;
|
||||
grid->LocalIndexToLocalCoor(lidx, lcoor);
|
||||
int o_idx=grid->oIndex(lcoor);
|
||||
int i_idx=grid->iIndex(lcoor);
|
||||
int gidx=parallel_rng.generator_idx(o_idx,i_idx);
|
||||
parallel_rng.GetState(tmp,gidx);
|
||||
std::copy(tmp.begin(),tmp.end(),iodata[lidx].begin());
|
||||
});
|
||||
timer.Stop();
|
||||
|
@ -123,7 +123,7 @@ assert(GRID_FIELD_NORM_CALC(FieldNormMetaData_, n2ck) < 1.0e-5);
|
||||
////////////////////////////////////////////////////////////
|
||||
// Helper to fill out metadata
|
||||
////////////////////////////////////////////////////////////
|
||||
template<class vobj> void ScidacMetaData(Lattice<vobj> & field,
|
||||
template<class vobj> void ScidacMetaData(Lattice<vobj> & field,
|
||||
FieldMetaData &header,
|
||||
scidacRecord & _scidacRecord,
|
||||
scidacFile & _scidacFile)
|
||||
@ -619,12 +619,12 @@ class IldgWriter : public ScidacWriter {
|
||||
// Don't require scidac records EXCEPT checksum
|
||||
// Use Grid MetaData object if present.
|
||||
////////////////////////////////////////////////////////////////
|
||||
template <class vsimd>
|
||||
void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,int sequence,std::string LFN,std::string description)
|
||||
template <class stats = PeriodicGaugeStatistics>
|
||||
void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,int sequence,std::string LFN,std::string description)
|
||||
{
|
||||
GridBase * grid = Umu.Grid();
|
||||
typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
|
||||
typedef iLorentzColourMatrix<vsimd> vobj;
|
||||
typedef Lattice<vLorentzColourMatrixD> GaugeField;
|
||||
typedef vLorentzColourMatrixD vobj;
|
||||
typedef typename vobj::scalar_object sobj;
|
||||
|
||||
////////////////////////////////////////
|
||||
@ -636,6 +636,9 @@ class IldgWriter : public ScidacWriter {
|
||||
|
||||
ScidacMetaData(Umu,header,_scidacRecord,_scidacFile);
|
||||
|
||||
stats Stats;
|
||||
Stats(Umu,header);
|
||||
|
||||
std::string format = header.floating_point;
|
||||
header.ensemble_id = description;
|
||||
header.ensemble_label = description;
|
||||
@ -705,10 +708,10 @@ class IldgReader : public GridLimeReader {
|
||||
// Else use ILDG MetaData object if present.
|
||||
// Else use SciDAC MetaData object if present.
|
||||
////////////////////////////////////////////////////////////////
|
||||
template <class vsimd>
|
||||
void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, FieldMetaData &FieldMetaData_) {
|
||||
template <class stats = PeriodicGaugeStatistics>
|
||||
void readConfiguration(Lattice<vLorentzColourMatrixD> &Umu, FieldMetaData &FieldMetaData_) {
|
||||
|
||||
typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
|
||||
typedef Lattice<vLorentzColourMatrixD > GaugeField;
|
||||
typedef typename GaugeField::vector_object vobj;
|
||||
typedef typename vobj::scalar_object sobj;
|
||||
|
||||
@ -921,7 +924,8 @@ class IldgReader : public GridLimeReader {
|
||||
|
||||
if ( found_FieldMetaData || found_usqcdInfo ) {
|
||||
FieldMetaData checker;
|
||||
GaugeStatistics(Umu,checker);
|
||||
stats Stats;
|
||||
Stats(Umu,checker);
|
||||
assert(fabs(checker.plaquette - FieldMetaData_.plaquette )<1.0e-5);
|
||||
assert(fabs(checker.link_trace - FieldMetaData_.link_trace)<1.0e-5);
|
||||
std::cout << GridLogMessage<<"Plaquette and link trace match " << std::endl;
|
||||
|
@ -176,29 +176,18 @@ template<class vobj> inline void PrepareMetaData(Lattice<vobj> & field, FieldMet
|
||||
GridMetaData(grid,header);
|
||||
MachineCharacteristics(header);
|
||||
}
|
||||
inline void GaugeStatistics(Lattice<vLorentzColourMatrixF> & data,FieldMetaData &header)
|
||||
template<class Impl>
|
||||
class GaugeStatistics
|
||||
{
|
||||
// How to convert data precision etc...
|
||||
header.link_trace=WilsonLoops<PeriodicGimplF>::linkTrace(data);
|
||||
header.plaquette =WilsonLoops<PeriodicGimplF>::avgPlaquette(data);
|
||||
}
|
||||
inline void GaugeStatistics(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header)
|
||||
{
|
||||
// How to convert data precision etc...
|
||||
header.link_trace=WilsonLoops<PeriodicGimplD>::linkTrace(data);
|
||||
header.plaquette =WilsonLoops<PeriodicGimplD>::avgPlaquette(data);
|
||||
}
|
||||
template<> inline void PrepareMetaData<vLorentzColourMatrixF>(Lattice<vLorentzColourMatrixF> & field, FieldMetaData &header)
|
||||
{
|
||||
|
||||
GridBase *grid = field.Grid();
|
||||
std::string format = getFormatString<vLorentzColourMatrixF>();
|
||||
header.floating_point = format;
|
||||
header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac
|
||||
GridMetaData(grid,header);
|
||||
GaugeStatistics(field,header);
|
||||
MachineCharacteristics(header);
|
||||
}
|
||||
public:
|
||||
void operator()(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header)
|
||||
{
|
||||
header.link_trace=WilsonLoops<Impl>::linkTrace(data);
|
||||
header.plaquette =WilsonLoops<Impl>::avgPlaquette(data);
|
||||
}
|
||||
};
|
||||
typedef GaugeStatistics<PeriodicGimplD> PeriodicGaugeStatistics;
|
||||
typedef GaugeStatistics<ConjugateGimplD> ConjugateGaugeStatistics;
|
||||
template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzColourMatrixD> & field, FieldMetaData &header)
|
||||
{
|
||||
GridBase *grid = field.Grid();
|
||||
@ -206,7 +195,6 @@ template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzCo
|
||||
header.floating_point = format;
|
||||
header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac
|
||||
GridMetaData(grid,header);
|
||||
GaugeStatistics(field,header);
|
||||
MachineCharacteristics(header);
|
||||
}
|
||||
|
||||
@ -301,6 +289,30 @@ struct GaugeSimpleUnmunger {
|
||||
};
|
||||
};
|
||||
|
||||
template<class fobj,class sobj>
|
||||
struct GaugeDoubleStoredMunger{
|
||||
void operator()(fobj &in, sobj &out) {
|
||||
for (int mu = 0; mu < Nds; mu++) {
|
||||
for (int i = 0; i < Nc; i++) {
|
||||
for (int j = 0; j < Nc; j++) {
|
||||
out(mu)()(i, j) = in(mu)()(i, j);
|
||||
}}
|
||||
}
|
||||
};
|
||||
};
|
||||
|
||||
template <class fobj, class sobj>
|
||||
struct GaugeDoubleStoredUnmunger {
|
||||
void operator()(sobj &in, fobj &out) {
|
||||
for (int mu = 0; mu < Nds; mu++) {
|
||||
for (int i = 0; i < Nc; i++) {
|
||||
for (int j = 0; j < Nc; j++) {
|
||||
out(mu)()(i, j) = in(mu)()(i, j);
|
||||
}}
|
||||
}
|
||||
};
|
||||
};
|
||||
|
||||
template<class fobj,class sobj>
|
||||
struct Gauge3x2munger{
|
||||
void operator() (fobj &in,sobj &out){
|
||||
|
@ -40,6 +40,8 @@ using namespace Grid;
|
||||
class NerscIO : public BinaryIO {
|
||||
public:
|
||||
|
||||
typedef Lattice<vLorentzColourMatrixD> GaugeField;
|
||||
|
||||
static inline void truncate(std::string file){
|
||||
std::ofstream fout(file,std::ios::out);
|
||||
}
|
||||
@ -129,12 +131,12 @@ public:
|
||||
// Now the meat: the object readers
|
||||
/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
template<class vsimd>
|
||||
static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,
|
||||
template<class GaugeStats=PeriodicGaugeStatistics>
|
||||
static inline void readConfiguration(GaugeField &Umu,
|
||||
FieldMetaData& header,
|
||||
std::string file)
|
||||
std::string file,
|
||||
GaugeStats GaugeStatisticsCalculator=GaugeStats())
|
||||
{
|
||||
typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
|
||||
|
||||
GridBase *grid = Umu.Grid();
|
||||
uint64_t offset = readHeader(file,Umu.Grid(),header);
|
||||
@ -146,30 +148,30 @@ public:
|
||||
int ieee32big = (format == std::string("IEEE32BIG"));
|
||||
int ieee32 = (format == std::string("IEEE32"));
|
||||
int ieee64big = (format == std::string("IEEE64BIG"));
|
||||
int ieee64 = (format == std::string("IEEE64"));
|
||||
int ieee64 = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE"));
|
||||
|
||||
uint32_t nersc_csum,scidac_csuma,scidac_csumb;
|
||||
// depending on datatype, set up munger;
|
||||
// munger is a function of <floating point, Real, data_type>
|
||||
if ( header.data_type == std::string("4D_SU3_GAUGE") ) {
|
||||
if ( ieee32 || ieee32big ) {
|
||||
BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3F>
|
||||
BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3F>
|
||||
(Umu,file,Gauge3x2munger<LorentzColour2x3F,LorentzColourMatrix>(), offset,format,
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
}
|
||||
if ( ieee64 || ieee64big ) {
|
||||
BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3D>
|
||||
BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3D>
|
||||
(Umu,file,Gauge3x2munger<LorentzColour2x3D,LorentzColourMatrix>(),offset,format,
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
}
|
||||
} else if ( header.data_type == std::string("4D_SU3_GAUGE_3x3") ) {
|
||||
if ( ieee32 || ieee32big ) {
|
||||
BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixF>
|
||||
BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixF>
|
||||
(Umu,file,GaugeSimpleMunger<LorentzColourMatrixF,LorentzColourMatrix>(),offset,format,
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
}
|
||||
if ( ieee64 || ieee64big ) {
|
||||
BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixD>
|
||||
BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixD>
|
||||
(Umu,file,GaugeSimpleMunger<LorentzColourMatrixD,LorentzColourMatrix>(),offset,format,
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
}
|
||||
@ -177,7 +179,7 @@ public:
|
||||
assert(0);
|
||||
}
|
||||
|
||||
GaugeStatistics(Umu,clone);
|
||||
GaugeStats Stats; Stats(Umu,clone);
|
||||
|
||||
std::cout<<GridLogMessage <<"NERSC Configuration "<<file<<" checksum "<<std::hex<<nersc_csum<< std::dec
|
||||
<<" header "<<std::hex<<header.checksum<<std::dec <<std::endl;
|
||||
@ -203,15 +205,13 @@ public:
|
||||
std::cout<<GridLogMessage <<"NERSC Configuration "<<file<< " and plaquette, link trace, and checksum agree"<<std::endl;
|
||||
}
|
||||
|
||||
template<class vsimd>
|
||||
static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,
|
||||
template<class GaugeStats=PeriodicGaugeStatistics>
|
||||
static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,
|
||||
std::string file,
|
||||
int two_row,
|
||||
int bits32)
|
||||
{
|
||||
typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField;
|
||||
|
||||
typedef iLorentzColourMatrix<vsimd> vobj;
|
||||
typedef vLorentzColourMatrixD vobj;
|
||||
typedef typename vobj::scalar_object sobj;
|
||||
|
||||
FieldMetaData header;
|
||||
@ -229,7 +229,7 @@ public:
|
||||
|
||||
GridMetaData(grid,header);
|
||||
assert(header.nd==4);
|
||||
GaugeStatistics(Umu,header);
|
||||
GaugeStats Stats; Stats(Umu,header);
|
||||
MachineCharacteristics(header);
|
||||
|
||||
uint64_t offset;
|
||||
@ -238,19 +238,19 @@ public:
|
||||
header.floating_point = std::string("IEEE64BIG");
|
||||
header.data_type = std::string("4D_SU3_GAUGE_3x3");
|
||||
GaugeSimpleUnmunger<fobj3D,sobj> munge;
|
||||
if ( grid->IsBoss() ) {
|
||||
truncate(file);
|
||||
offset = writeHeader(header,file);
|
||||
}
|
||||
grid->Broadcast(0,(void *)&offset,sizeof(offset));
|
||||
if ( grid->IsBoss() ) {
|
||||
truncate(file);
|
||||
offset = writeHeader(header,file);
|
||||
}
|
||||
grid->Broadcast(0,(void *)&offset,sizeof(offset));
|
||||
|
||||
uint32_t nersc_csum,scidac_csuma,scidac_csumb;
|
||||
BinaryIO::writeLatticeObject<vobj,fobj3D>(Umu,file,munge,offset,header.floating_point,
|
||||
nersc_csum,scidac_csuma,scidac_csumb);
|
||||
header.checksum = nersc_csum;
|
||||
if ( grid->IsBoss() ) {
|
||||
writeHeader(header,file);
|
||||
}
|
||||
if ( grid->IsBoss() ) {
|
||||
writeHeader(header,file);
|
||||
}
|
||||
|
||||
std::cout<<GridLogMessage <<"Written NERSC Configuration on "<< file << " checksum "
|
||||
<<std::hex<<header.checksum
|
||||
|
224
Grid/parallelIO/OpenQcdIO.h
Normal file
224
Grid/parallelIO/OpenQcdIO.h
Normal file
@ -0,0 +1,224 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/parallelIO/OpenQcdIO.h
|
||||
|
||||
Copyright (C) 2015 - 2020
|
||||
|
||||
Author: Daniel Richtmann <daniel.richtmann@ur.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#pragma once
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
struct OpenQcdHeader : Serializable {
|
||||
GRID_SERIALIZABLE_CLASS_MEMBERS(OpenQcdHeader,
|
||||
int, Nt,
|
||||
int, Nx,
|
||||
int, Ny,
|
||||
int, Nz,
|
||||
double, plaq);
|
||||
};
|
||||
|
||||
class OpenQcdIO : public BinaryIO {
|
||||
public:
|
||||
static constexpr double normalisationFactor = Nc; // normalisation difference: grid 18, openqcd 6
|
||||
|
||||
static inline int readHeader(std::string file, GridBase* grid, FieldMetaData& field) {
|
||||
OpenQcdHeader header;
|
||||
|
||||
{
|
||||
std::ifstream fin(file, std::ios::in | std::ios::binary);
|
||||
fin.read(reinterpret_cast<char*>(&header), sizeof(OpenQcdHeader));
|
||||
assert(!fin.fail());
|
||||
field.data_start = fin.tellg();
|
||||
fin.close();
|
||||
}
|
||||
|
||||
header.plaq /= normalisationFactor;
|
||||
|
||||
// sanity check (should trigger on endian issues)
|
||||
assert(0 < header.Nt && header.Nt <= 1024);
|
||||
assert(0 < header.Nx && header.Nx <= 1024);
|
||||
assert(0 < header.Ny && header.Ny <= 1024);
|
||||
assert(0 < header.Nz && header.Nz <= 1024);
|
||||
|
||||
field.dimension[0] = header.Nx;
|
||||
field.dimension[1] = header.Ny;
|
||||
field.dimension[2] = header.Nz;
|
||||
field.dimension[3] = header.Nt;
|
||||
|
||||
std::cout << GridLogDebug << "header: " << header << std::endl;
|
||||
std::cout << GridLogDebug << "grid dimensions: " << grid->_fdimensions << std::endl;
|
||||
std::cout << GridLogDebug << "file dimensions: " << field.dimension << std::endl;
|
||||
|
||||
assert(grid->_ndimension == Nd);
|
||||
for(int d = 0; d < Nd; d++)
|
||||
assert(grid->_fdimensions[d] == field.dimension[d]);
|
||||
|
||||
field.plaquette = header.plaq;
|
||||
|
||||
return field.data_start;
|
||||
}
|
||||
|
||||
template<class vsimd>
|
||||
static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
|
||||
FieldMetaData& header,
|
||||
std::string file) {
|
||||
typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubleStoredGaugeField;
|
||||
|
||||
assert(Ns == 4 and Nd == 4 and Nc == 3);
|
||||
|
||||
auto grid = dynamic_cast<GridCartesian*>(Umu.Grid());
|
||||
assert(grid != nullptr); assert(grid->_ndimension == Nd);
|
||||
|
||||
uint64_t offset = readHeader(file, Umu.Grid(), header);
|
||||
|
||||
FieldMetaData clone(header);
|
||||
|
||||
std::string format("IEEE64"); // they always store little endian double precsision
|
||||
uint32_t nersc_csum, scidac_csuma, scidac_csumb;
|
||||
|
||||
GridCartesian* grid_openqcd = createOpenQcdGrid(grid);
|
||||
GridRedBlackCartesian* grid_rb = SpaceTimeGrid::makeFourDimRedBlackGrid(grid);
|
||||
|
||||
typedef DoubleStoredColourMatrixD fobj;
|
||||
typedef typename DoubleStoredGaugeField::vector_object::scalar_object sobj;
|
||||
typedef typename DoubleStoredGaugeField::vector_object::Realified::scalar_type word;
|
||||
|
||||
word w = 0;
|
||||
|
||||
std::vector<fobj> iodata(grid_openqcd->lSites()); // Munge, checksum, byte order in here
|
||||
std::vector<sobj> scalardata(grid->lSites());
|
||||
|
||||
IOobject(w, grid_openqcd, iodata, file, offset, format, BINARYIO_READ | BINARYIO_LEXICOGRAPHIC,
|
||||
nersc_csum, scidac_csuma, scidac_csumb);
|
||||
|
||||
GridStopWatch timer;
|
||||
timer.Start();
|
||||
|
||||
DoubleStoredGaugeField Umu_ds(grid);
|
||||
|
||||
auto munge = GaugeDoubleStoredMunger<DoubleStoredColourMatrixD, DoubleStoredColourMatrix>();
|
||||
|
||||
Coordinate ldim = grid->LocalDimensions();
|
||||
thread_for(idx_g, grid->lSites(), {
|
||||
Coordinate coor;
|
||||
grid->LocalIndexToLocalCoor(idx_g, coor);
|
||||
|
||||
bool isOdd = grid_rb->CheckerBoard(coor) == Odd;
|
||||
|
||||
if(!isOdd) continue;
|
||||
|
||||
int idx_o = (coor[Tdir] * ldim[Xdir] * ldim[Ydir] * ldim[Zdir]
|
||||
+ coor[Xdir] * ldim[Ydir] * ldim[Zdir]
|
||||
+ coor[Ydir] * ldim[Zdir]
|
||||
+ coor[Zdir])/2;
|
||||
|
||||
munge(iodata[idx_o], scalardata[idx_g]);
|
||||
});
|
||||
|
||||
grid->Barrier(); timer.Stop();
|
||||
std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: munge overhead " << timer.Elapsed() << std::endl;
|
||||
|
||||
timer.Reset(); timer.Start();
|
||||
|
||||
vectorizeFromLexOrdArray(scalardata, Umu_ds);
|
||||
|
||||
grid->Barrier(); timer.Stop();
|
||||
std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: vectorize overhead " << timer.Elapsed() << std::endl;
|
||||
|
||||
timer.Reset(); timer.Start();
|
||||
|
||||
undoDoubleStore(Umu, Umu_ds);
|
||||
|
||||
grid->Barrier(); timer.Stop();
|
||||
std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: redistribute overhead " << timer.Elapsed() << std::endl;
|
||||
|
||||
PeriodicGaugeStatistics Stats; Stats(Umu, clone);
|
||||
|
||||
RealD plaq_diff = fabs(clone.plaquette - header.plaquette);
|
||||
|
||||
// clang-format off
|
||||
std::cout << GridLogMessage << "OpenQcd Configuration " << file
|
||||
<< " plaquette " << clone.plaquette
|
||||
<< " header " << header.plaquette
|
||||
<< " difference " << plaq_diff
|
||||
<< std::endl;
|
||||
// clang-format on
|
||||
|
||||
RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15;
|
||||
RealD tol = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code
|
||||
|
||||
if(plaq_diff >= tol)
|
||||
std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl;
|
||||
assert(plaq_diff < tol);
|
||||
|
||||
std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl;
|
||||
}
|
||||
|
||||
template<class vsimd>
|
||||
static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
|
||||
std::string file) {
|
||||
std::cout << GridLogError << "Writing to openQCD file format is not implemented" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
|
||||
private:
|
||||
static inline GridCartesian* createOpenQcdGrid(GridCartesian* grid) {
|
||||
// exploit GridCartesian to be able to still use IOobject
|
||||
Coordinate gdim = grid->GlobalDimensions();
|
||||
Coordinate ldim = grid->LocalDimensions();
|
||||
Coordinate pcoor = grid->ThisProcessorCoor();
|
||||
|
||||
// openqcd does rb on the z direction
|
||||
gdim[Zdir] /= 2;
|
||||
ldim[Zdir] /= 2;
|
||||
|
||||
// and has the order T X Y Z (from slowest to fastest)
|
||||
std::swap(gdim[Xdir], gdim[Zdir]);
|
||||
std::swap(ldim[Xdir], ldim[Zdir]);
|
||||
std::swap(pcoor[Xdir], pcoor[Zdir]);
|
||||
|
||||
GridCartesian* ret = SpaceTimeGrid::makeFourDimGrid(gdim, grid->_simd_layout, grid->ProcessorGrid());
|
||||
ret->_ldimensions = ldim;
|
||||
ret->_processor_coor = pcoor;
|
||||
return ret;
|
||||
}
|
||||
|
||||
template<class vsimd>
|
||||
static inline void undoDoubleStore(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
|
||||
Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) {
|
||||
conformable(Umu.Grid(), Umu_ds.Grid());
|
||||
Lattice<iColourMatrix<vsimd>> U(Umu.Grid());
|
||||
|
||||
// they store T+, T-, X+, X-, Y+, Y-, Z+, Z-
|
||||
for(int mu_g = 0; mu_g < Nd; ++mu_g) {
|
||||
int mu_o = (mu_g + 1) % Nd;
|
||||
U = PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o)
|
||||
+ Cshift(PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o + 1), mu_g, +1);
|
||||
PokeIndex<LorentzIndex>(Umu, U, mu_g);
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
281
Grid/parallelIO/OpenQcdIOChromaReference.h
Normal file
281
Grid/parallelIO/OpenQcdIOChromaReference.h
Normal file
@ -0,0 +1,281 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/parallelIO/OpenQcdIOChromaReference.h
|
||||
|
||||
Copyright (C) 2015 - 2020
|
||||
|
||||
Author: Daniel Richtmann <daniel.richtmann@ur.de>
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#pragma once
|
||||
|
||||
#include <ios>
|
||||
#include <iostream>
|
||||
#include <limits>
|
||||
#include <iomanip>
|
||||
#include <mpi.h>
|
||||
#include <ostream>
|
||||
#include <string>
|
||||
|
||||
#define CHECK {std::cerr << __FILE__ << " @l " << __LINE__ << ": CHECK" << grid->ThisRank() << std::endl;}
|
||||
#define CHECK_VAR(a) { std::cerr << __FILE__ << "@l" << __LINE__ << " on "<< grid->ThisRank() << ": " << __func__ << " " << #a << "=" << (a) << std::endl; }
|
||||
// #undef CHECK
|
||||
// #define CHECK
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
class ParRdr {
|
||||
private:
|
||||
bool const swap;
|
||||
|
||||
MPI_Status status;
|
||||
MPI_File fp;
|
||||
|
||||
int err;
|
||||
|
||||
MPI_Datatype oddSiteType;
|
||||
MPI_Datatype fileViewType;
|
||||
|
||||
GridBase* grid;
|
||||
|
||||
public:
|
||||
ParRdr(MPI_Comm comm, std::string const& filename, GridBase* gridPtr)
|
||||
: swap(false)
|
||||
, grid(gridPtr) {
|
||||
err = MPI_File_open(comm, const_cast<char*>(filename.c_str()), MPI_MODE_RDONLY, MPI_INFO_NULL, &fp);
|
||||
assert(err == MPI_SUCCESS);
|
||||
}
|
||||
|
||||
virtual ~ParRdr() { MPI_File_close(&fp); }
|
||||
|
||||
inline void errInfo(int const err, std::string const& func) {
|
||||
static char estring[MPI_MAX_ERROR_STRING];
|
||||
int eclass = -1, len = 0;
|
||||
MPI_Error_class(err, &eclass);
|
||||
MPI_Error_string(err, estring, &len);
|
||||
std::cerr << func << " - Error " << eclass << ": " << estring << std::endl;
|
||||
}
|
||||
|
||||
int readHeader(FieldMetaData& field) {
|
||||
assert((grid->_ndimension == Nd) && (Nd == 4));
|
||||
assert(Nc == 3);
|
||||
|
||||
OpenQcdHeader header;
|
||||
|
||||
readBlock(reinterpret_cast<char*>(&header), 0, sizeof(OpenQcdHeader), MPI_CHAR);
|
||||
|
||||
header.plaq /= 3.; // TODO change this into normalizationfactor
|
||||
|
||||
// sanity check (should trigger on endian issues) TODO remove?
|
||||
assert(0 < header.Nt && header.Nt <= 1024);
|
||||
assert(0 < header.Nx && header.Nx <= 1024);
|
||||
assert(0 < header.Ny && header.Ny <= 1024);
|
||||
assert(0 < header.Nz && header.Nz <= 1024);
|
||||
|
||||
field.dimension[0] = header.Nx;
|
||||
field.dimension[1] = header.Ny;
|
||||
field.dimension[2] = header.Nz;
|
||||
field.dimension[3] = header.Nt;
|
||||
|
||||
for(int d = 0; d < Nd; d++)
|
||||
assert(grid->FullDimensions()[d] == field.dimension[d]);
|
||||
|
||||
field.plaquette = header.plaq;
|
||||
|
||||
field.data_start = sizeof(OpenQcdHeader);
|
||||
|
||||
return field.data_start;
|
||||
}
|
||||
|
||||
void readBlock(void* const dest, uint64_t const pos, uint64_t const nbytes, MPI_Datatype const datatype) {
|
||||
err = MPI_File_read_at_all(fp, pos, dest, nbytes, datatype, &status);
|
||||
errInfo(err, "MPI_File_read_at_all");
|
||||
// CHECK_VAR(err)
|
||||
|
||||
int read = -1;
|
||||
MPI_Get_count(&status, datatype, &read);
|
||||
// CHECK_VAR(read)
|
||||
assert(nbytes == (uint64_t)read);
|
||||
assert(err == MPI_SUCCESS);
|
||||
}
|
||||
|
||||
void createTypes() {
|
||||
constexpr int elem_size = Nd * 2 * 2 * Nc * Nc * sizeof(double); // 2_complex 2_fwdbwd
|
||||
|
||||
err = MPI_Type_contiguous(elem_size, MPI_BYTE, &oddSiteType); assert(err == MPI_SUCCESS);
|
||||
err = MPI_Type_commit(&oddSiteType); assert(err == MPI_SUCCESS);
|
||||
|
||||
Coordinate const L = grid->GlobalDimensions();
|
||||
Coordinate const l = grid->LocalDimensions();
|
||||
Coordinate const i = grid->ThisProcessorCoor();
|
||||
|
||||
Coordinate sizes({L[2] / 2, L[1], L[0], L[3]});
|
||||
Coordinate subsizes({l[2] / 2, l[1], l[0], l[3]});
|
||||
Coordinate starts({i[2] * l[2] / 2, i[1] * l[1], i[0] * l[0], i[3] * l[3]});
|
||||
|
||||
err = MPI_Type_create_subarray(grid->_ndimension, &sizes[0], &subsizes[0], &starts[0], MPI_ORDER_FORTRAN, oddSiteType, &fileViewType); assert(err == MPI_SUCCESS);
|
||||
err = MPI_Type_commit(&fileViewType); assert(err == MPI_SUCCESS);
|
||||
}
|
||||
|
||||
void freeTypes() {
|
||||
err = MPI_Type_free(&fileViewType); assert(err == MPI_SUCCESS);
|
||||
err = MPI_Type_free(&oddSiteType); assert(err == MPI_SUCCESS);
|
||||
}
|
||||
|
||||
bool readGauge(std::vector<ColourMatrixD>& domain_buff, FieldMetaData& meta) {
|
||||
auto hdr_offset = readHeader(meta);
|
||||
CHECK
|
||||
createTypes();
|
||||
err = MPI_File_set_view(fp, hdr_offset, oddSiteType, fileViewType, "native", MPI_INFO_NULL); errInfo(err, "MPI_File_set_view0"); assert(err == MPI_SUCCESS);
|
||||
CHECK
|
||||
int const domainSites = grid->lSites();
|
||||
domain_buff.resize(Nd * domainSites); // 2_fwdbwd * 4_Nd * domainSites / 2_onlyodd
|
||||
|
||||
// the actual READ
|
||||
constexpr uint64_t cm_size = 2 * Nc * Nc * sizeof(double); // 2_complex
|
||||
constexpr uint64_t os_size = Nd * 2 * cm_size; // 2_fwdbwd
|
||||
constexpr uint64_t max_elems = std::numeric_limits<int>::max(); // int adressable elems: floor is fine
|
||||
uint64_t const n_os = domainSites / 2;
|
||||
|
||||
for(uint64_t os_idx = 0; os_idx < n_os;) {
|
||||
uint64_t const read_os = os_idx + max_elems <= n_os ? max_elems : n_os - os_idx;
|
||||
uint64_t const cm = os_idx * Nd * 2;
|
||||
readBlock(&(domain_buff[cm]), os_idx, read_os, oddSiteType);
|
||||
os_idx += read_os;
|
||||
}
|
||||
|
||||
CHECK
|
||||
err = MPI_File_set_view(fp, 0, MPI_BYTE, MPI_BYTE, "native", MPI_INFO_NULL);
|
||||
errInfo(err, "MPI_File_set_view1");
|
||||
assert(err == MPI_SUCCESS);
|
||||
freeTypes();
|
||||
|
||||
std::cout << GridLogMessage << "read sum: " << n_os * os_size << " bytes" << std::endl;
|
||||
return true;
|
||||
}
|
||||
};
|
||||
|
||||
class OpenQcdIOChromaReference : public BinaryIO {
|
||||
public:
|
||||
template<class vsimd>
|
||||
static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
|
||||
Grid::FieldMetaData& header,
|
||||
std::string file) {
|
||||
typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubledGaugeField;
|
||||
|
||||
assert(Ns == 4 and Nd == 4 and Nc == 3);
|
||||
|
||||
auto grid = Umu.Grid();
|
||||
|
||||
typedef ColourMatrixD fobj;
|
||||
|
||||
std::vector<fobj> iodata(
|
||||
Nd * grid->lSites()); // actual size = 2*Nd*lsites but have only lsites/2 sites in file
|
||||
|
||||
{
|
||||
ParRdr rdr(MPI_COMM_WORLD, file, grid);
|
||||
rdr.readGauge(iodata, header);
|
||||
} // equivalent to using binaryio
|
||||
|
||||
std::vector<iDoubleStoredColourMatrix<typename vsimd::scalar_type>> Umu_ds_scalar(grid->lSites());
|
||||
|
||||
copyToLatticeObject(Umu_ds_scalar, iodata, grid); // equivalent to munging
|
||||
|
||||
DoubledGaugeField Umu_ds(grid);
|
||||
|
||||
vectorizeFromLexOrdArray(Umu_ds_scalar, Umu_ds);
|
||||
|
||||
redistribute(Umu, Umu_ds); // equivalent to undoDoublestore
|
||||
|
||||
FieldMetaData clone(header);
|
||||
|
||||
PeriodicGaugeStatistics Stats; Stats(Umu, clone);
|
||||
|
||||
RealD plaq_diff = fabs(clone.plaquette - header.plaquette);
|
||||
|
||||
// clang-format off
|
||||
std::cout << GridLogMessage << "OpenQcd Configuration " << file
|
||||
<< " plaquette " << clone.plaquette
|
||||
<< " header " << header.plaquette
|
||||
<< " difference " << plaq_diff
|
||||
<< std::endl;
|
||||
// clang-format on
|
||||
|
||||
RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15;
|
||||
RealD tol = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code
|
||||
|
||||
if(plaq_diff >= tol)
|
||||
std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl;
|
||||
assert(plaq_diff < tol);
|
||||
|
||||
std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl;
|
||||
}
|
||||
|
||||
private:
|
||||
template<class vsimd>
|
||||
static inline void redistribute(Lattice<iLorentzColourMatrix<vsimd>>& Umu,
|
||||
Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) {
|
||||
Grid::conformable(Umu.Grid(), Umu_ds.Grid());
|
||||
Lattice<iColourMatrix<vsimd>> U(Umu.Grid());
|
||||
|
||||
U = PeekIndex<LorentzIndex>(Umu_ds, 2) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 3), 0, +1); PokeIndex<LorentzIndex>(Umu, U, 0);
|
||||
U = PeekIndex<LorentzIndex>(Umu_ds, 4) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 5), 1, +1); PokeIndex<LorentzIndex>(Umu, U, 1);
|
||||
U = PeekIndex<LorentzIndex>(Umu_ds, 6) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 7), 2, +1); PokeIndex<LorentzIndex>(Umu, U, 2);
|
||||
U = PeekIndex<LorentzIndex>(Umu_ds, 0) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 1), 3, +1); PokeIndex<LorentzIndex>(Umu, U, 3);
|
||||
}
|
||||
|
||||
static inline void copyToLatticeObject(std::vector<DoubleStoredColourMatrix>& u_fb,
|
||||
std::vector<ColourMatrixD> const& node_buff,
|
||||
GridBase* grid) {
|
||||
assert(node_buff.size() == Nd * grid->lSites());
|
||||
|
||||
Coordinate const& l = grid->LocalDimensions();
|
||||
|
||||
Coordinate coord(Nd);
|
||||
int& x = coord[0];
|
||||
int& y = coord[1];
|
||||
int& z = coord[2];
|
||||
int& t = coord[3];
|
||||
|
||||
int buff_idx = 0;
|
||||
for(t = 0; t < l[3]; ++t) // IMPORTANT: openQCD file ordering
|
||||
for(x = 0; x < l[0]; ++x)
|
||||
for(y = 0; y < l[1]; ++y)
|
||||
for(z = 0; z < l[2]; ++z) {
|
||||
if((t + z + y + x) % 2 == 0) continue;
|
||||
|
||||
int local_idx;
|
||||
Lexicographic::IndexFromCoor(coord, local_idx, grid->LocalDimensions());
|
||||
for(int mu = 0; mu < 2 * Nd; ++mu)
|
||||
for(int c1 = 0; c1 < Nc; ++c1) {
|
||||
for(int c2 = 0; c2 < Nc; ++c2) {
|
||||
u_fb[local_idx](mu)()(c1,c2) = node_buff[mu+buff_idx]()()(c1,c2);
|
||||
}
|
||||
}
|
||||
buff_idx += 2 * Nd;
|
||||
}
|
||||
|
||||
assert(node_buff.size() == buff_idx);
|
||||
}
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
@ -44,7 +44,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk>
|
||||
#include <sys/syscall.h>
|
||||
#endif
|
||||
#ifdef __x86_64__
|
||||
#ifdef GRID_NVCC
|
||||
#ifdef GRID_CUDA
|
||||
accelerator_inline uint64_t __rdtsc(void) { return 0; }
|
||||
accelerator_inline uint64_t __rdpmc(int ) { return 0; }
|
||||
#else
|
||||
@ -95,7 +95,8 @@ inline uint64_t cyclecount(void){
|
||||
}
|
||||
#elif defined __x86_64__
|
||||
inline uint64_t cyclecount(void){
|
||||
return __rdtsc();
|
||||
uint64_t ret = __rdtsc();
|
||||
return (uint64_t)ret;
|
||||
}
|
||||
#else
|
||||
|
||||
@ -111,7 +112,6 @@ class PerformanceCounter {
|
||||
private:
|
||||
|
||||
typedef struct {
|
||||
public:
|
||||
uint32_t type;
|
||||
uint64_t config;
|
||||
const char *name;
|
||||
|
@ -110,15 +110,15 @@ public:
|
||||
#endif
|
||||
accumulator = std::chrono::duration_cast<GridUsecs>(start-start);
|
||||
}
|
||||
GridTime Elapsed(void) {
|
||||
GridTime Elapsed(void) const {
|
||||
assert(running == false);
|
||||
return std::chrono::duration_cast<GridTime>( accumulator );
|
||||
}
|
||||
uint64_t useconds(void){
|
||||
uint64_t useconds(void) const {
|
||||
assert(running == false);
|
||||
return (uint64_t) accumulator.count();
|
||||
}
|
||||
bool isRunning(void){
|
||||
bool isRunning(void) const {
|
||||
return running;
|
||||
}
|
||||
};
|
||||
|
@ -12773,7 +12773,7 @@ namespace pugi
|
||||
#undef PUGI__THROW_ERROR
|
||||
#undef PUGI__CHECK_ERROR
|
||||
|
||||
#ifdef GRID_NVCC
|
||||
#ifdef GRID_CUDA
|
||||
#pragma pop
|
||||
#endif
|
||||
|
||||
|
@ -47,7 +47,7 @@ static constexpr int Ym = 5;
|
||||
static constexpr int Zm = 6;
|
||||
static constexpr int Tm = 7;
|
||||
|
||||
static constexpr int Nc=3;
|
||||
static constexpr int Nc=Config_Nc;
|
||||
static constexpr int Ns=4;
|
||||
static constexpr int Nd=4;
|
||||
static constexpr int Nhs=2; // half spinor
|
||||
@ -80,6 +80,13 @@ template<typename T> struct isSpinor {
|
||||
template <typename T> using IfSpinor = Invoke<std::enable_if< isSpinor<T>::value,int> > ;
|
||||
template <typename T> using IfNotSpinor = Invoke<std::enable_if<!isSpinor<T>::value,int> > ;
|
||||
|
||||
const int CoarseIndex = 4;
|
||||
template<typename T> struct isCoarsened {
|
||||
static constexpr bool value = (CoarseIndex<=T::TensorLevel);
|
||||
};
|
||||
template <typename T> using IfCoarsened = Invoke<std::enable_if< isCoarsened<T>::value,int> > ;
|
||||
template <typename T> using IfNotCoarsened = Invoke<std::enable_if<!isCoarsened<T>::value,int> > ;
|
||||
|
||||
// ChrisK very keen to add extra space for Gparity doubling.
|
||||
//
|
||||
// Also add domain wall index, in a way where Wilson operator
|
||||
@ -133,23 +140,23 @@ typedef iSpinColourMatrix<vComplex > vSpinColourMatrix;
|
||||
typedef iSpinColourMatrix<vComplexF> vSpinColourMatrixF;
|
||||
typedef iSpinColourMatrix<vComplexD> vSpinColourMatrixD;
|
||||
|
||||
// SpinColourSpinColour matrix
|
||||
typedef iSpinColourSpinColourMatrix<Complex > SpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexF > SpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexD > SpinColourSpinColourMatrixD;
|
||||
// SpinColourSpinColour matrix
|
||||
typedef iSpinColourSpinColourMatrix<Complex > SpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexF > SpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexD > SpinColourSpinColourMatrixD;
|
||||
|
||||
typedef iSpinColourSpinColourMatrix<vComplex > vSpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexF> vSpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexD> vSpinColourSpinColourMatrixD;
|
||||
typedef iSpinColourSpinColourMatrix<vComplex > vSpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexF> vSpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexD> vSpinColourSpinColourMatrixD;
|
||||
|
||||
// SpinColourSpinColour matrix
|
||||
typedef iSpinColourSpinColourMatrix<Complex > SpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexF > SpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexD > SpinColourSpinColourMatrixD;
|
||||
// SpinColourSpinColour matrix
|
||||
typedef iSpinColourSpinColourMatrix<Complex > SpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexF > SpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<ComplexD > SpinColourSpinColourMatrixD;
|
||||
|
||||
typedef iSpinColourSpinColourMatrix<vComplex > vSpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexF> vSpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexD> vSpinColourSpinColourMatrixD;
|
||||
typedef iSpinColourSpinColourMatrix<vComplex > vSpinColourSpinColourMatrix;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexF> vSpinColourSpinColourMatrixF;
|
||||
typedef iSpinColourSpinColourMatrix<vComplexD> vSpinColourSpinColourMatrixD;
|
||||
|
||||
// LorentzColour
|
||||
typedef iLorentzColourMatrix<Complex > LorentzColourMatrix;
|
||||
@ -443,16 +450,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz
|
||||
//////////////////////////////////////////////
|
||||
// Fermion <-> propagator assignements
|
||||
//////////////////////////////////////////////
|
||||
//template <class Prop, class Ferm>
|
||||
template <class Fimpl>
|
||||
void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c)
|
||||
//template <class Prop, class Ferm>
|
||||
template <class Fimpl>
|
||||
void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c)
|
||||
{
|
||||
for(int j = 0; j < Ns; ++j)
|
||||
{
|
||||
auto pjs = peekSpin(p, j, s);
|
||||
auto fj = peekSpin(f, j);
|
||||
|
||||
for(int i = 0; i < Fimpl::Dimension; ++i)
|
||||
for(int i = 0; i < Fimpl::Dimension; ++i)
|
||||
{
|
||||
pokeColour(pjs, peekColour(fj, i), i, c);
|
||||
}
|
||||
@ -460,16 +467,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz
|
||||
}
|
||||
}
|
||||
|
||||
//template <class Prop, class Ferm>
|
||||
template <class Fimpl>
|
||||
void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c)
|
||||
//template <class Prop, class Ferm>
|
||||
template <class Fimpl>
|
||||
void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c)
|
||||
{
|
||||
for(int j = 0; j < Ns; ++j)
|
||||
{
|
||||
auto pjs = peekSpin(p, j, s);
|
||||
auto fj = peekSpin(f, j);
|
||||
|
||||
for(int i = 0; i < Fimpl::Dimension; ++i)
|
||||
for(int i = 0; i < Fimpl::Dimension; ++i)
|
||||
{
|
||||
pokeColour(fj, peekColour(pjs, i, c), i);
|
||||
}
|
||||
|
@ -41,7 +41,7 @@ class Action
|
||||
public:
|
||||
bool is_smeared = false;
|
||||
// Heatbath?
|
||||
virtual void refresh(const GaugeField& U, GridParallelRNG& pRNG) = 0; // refresh pseudofermions
|
||||
virtual void refresh(const GaugeField& U, GridSerialRNG &sRNG, GridParallelRNG& pRNG) = 0; // refresh pseudofermions
|
||||
virtual RealD S(const GaugeField& U) = 0; // evaluate the action
|
||||
virtual void deriv(const GaugeField& U, GaugeField& dSdU) = 0; // evaluate the action derivative
|
||||
virtual std::string action_name() = 0; // return the action name
|
||||
|
@ -40,8 +40,8 @@ public:
|
||||
public:
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField &in, FermionField &out);
|
||||
virtual RealD Mdag (const FermionField &in, FermionField &out);
|
||||
virtual void M (const FermionField &in, FermionField &out);
|
||||
virtual void Mdag (const FermionField &in, FermionField &out);
|
||||
|
||||
// half checkerboard operations
|
||||
virtual void Meooe (const FermionField &in, FermionField &out);
|
||||
@ -141,7 +141,33 @@ public:
|
||||
Vector<iSinglet<Simd> > MatpInvDag;
|
||||
Vector<iSinglet<Simd> > MatmInvDag;
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Conserved current utilities
|
||||
///////////////////////////////////////////////////////////////
|
||||
|
||||
// Virtual can't template
|
||||
void ContractConservedCurrent(PropagatorField &q_in_1,
|
||||
PropagatorField &q_in_2,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &phys_src,
|
||||
Current curr_type,
|
||||
unsigned int mu);
|
||||
|
||||
void SeqConservedCurrent(PropagatorField &q_in,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &phys_src,
|
||||
Current curr_type,
|
||||
unsigned int mu,
|
||||
unsigned int tmin,
|
||||
unsigned int tmax,
|
||||
ComplexField &lattice_cmplx);
|
||||
|
||||
void ContractJ5q(PropagatorField &q_in,ComplexField &J5q);
|
||||
void ContractJ5q(FermionField &q_in,ComplexField &J5q);
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Constructors
|
||||
///////////////////////////////////////////////////////////////
|
||||
CayleyFermion5D(GaugeField &_Umu,
|
||||
GridCartesian &FiveDimGrid,
|
||||
GridRedBlackCartesian &FiveDimRedBlackGrid,
|
||||
|
@ -41,8 +41,8 @@ public:
|
||||
public:
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField &in, FermionField &out);
|
||||
virtual RealD Mdag (const FermionField &in, FermionField &out);
|
||||
virtual void M (const FermionField &in, FermionField &out);
|
||||
virtual void Mdag (const FermionField &in, FermionField &out);
|
||||
|
||||
// half checkerboard operaions
|
||||
virtual void Meooe (const FermionField &in, FermionField &out);
|
||||
|
@ -53,8 +53,8 @@ public:
|
||||
virtual void DtildeInv (const FermionField& in, FermionField& out);
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField& in, FermionField& out);
|
||||
virtual RealD Mdag (const FermionField& in, FermionField& out);
|
||||
virtual void M (const FermionField& in, FermionField& out);
|
||||
virtual void Mdag (const FermionField& in, FermionField& out);
|
||||
|
||||
// half checkerboard operations
|
||||
virtual void Mooee (const FermionField& in, FermionField& out);
|
||||
|
@ -114,19 +114,22 @@ public:
|
||||
U = adj(Cshift(U, mu, -1));
|
||||
PokeIndex<LorentzIndex>(Uadj, U, mu);
|
||||
}
|
||||
|
||||
for (int lidx = 0; lidx < GaugeGrid->lSites(); lidx++) {
|
||||
|
||||
autoView(Umu_v,Umu,CpuRead);
|
||||
autoView(Uadj_v,Uadj,CpuRead);
|
||||
autoView(Uds_v,Uds,CpuWrite);
|
||||
thread_for( lidx, GaugeGrid->lSites(), {
|
||||
Coordinate lcoor;
|
||||
GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor);
|
||||
|
||||
peekLocalSite(ScalarUmu, Umu, lcoor);
|
||||
peekLocalSite(ScalarUmu, Umu_v, lcoor);
|
||||
for (int mu = 0; mu < 4; mu++) ScalarUds(mu) = ScalarUmu(mu);
|
||||
|
||||
peekLocalSite(ScalarUmu, Uadj, lcoor);
|
||||
peekLocalSite(ScalarUmu, Uadj_v, lcoor);
|
||||
for (int mu = 0; mu < 4; mu++) ScalarUds(mu + 4) = ScalarUmu(mu);
|
||||
|
||||
pokeLocalSite(ScalarUds, Uds, lcoor);
|
||||
}
|
||||
pokeLocalSite(ScalarUds, Uds_v, lcoor);
|
||||
});
|
||||
}
|
||||
|
||||
inline void InsertForce4D(GaugeField &mat, FermionField &Btilde,FermionField &A, int mu)
|
||||
|
@ -57,6 +57,7 @@ NAMESPACE_CHECK(WilsonClover);
|
||||
#include <Grid/qcd/action/fermion/WilsonFermion5D.h> // 5d base used by all 5d overlap types
|
||||
NAMESPACE_CHECK(Wilson5D);
|
||||
|
||||
#include <Grid/qcd/action/fermion/NaiveStaggeredFermion.h>
|
||||
#include <Grid/qcd/action/fermion/ImprovedStaggeredFermion.h>
|
||||
#include <Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h>
|
||||
NAMESPACE_CHECK(Staggered);
|
||||
@ -282,11 +283,15 @@ typedef ImprovedStaggeredFermion<StaggeredImplR> ImprovedStaggeredFermionR;
|
||||
typedef ImprovedStaggeredFermion<StaggeredImplF> ImprovedStaggeredFermionF;
|
||||
typedef ImprovedStaggeredFermion<StaggeredImplD> ImprovedStaggeredFermionD;
|
||||
|
||||
typedef NaiveStaggeredFermion<StaggeredImplR> NaiveStaggeredFermionR;
|
||||
typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF;
|
||||
typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD;
|
||||
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredImplR> ImprovedStaggeredFermion5DR;
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredImplF> ImprovedStaggeredFermion5DF;
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredImplD> ImprovedStaggeredFermion5DD;
|
||||
|
||||
#ifndef GRID_NVCC
|
||||
#ifndef GRID_CUDA
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplR> ImprovedStaggeredFermionVec5dR;
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplF> ImprovedStaggeredFermionVec5dF;
|
||||
typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplD> ImprovedStaggeredFermionVec5dD;
|
||||
|
@ -58,8 +58,8 @@ public:
|
||||
virtual GridBase *GaugeRedBlackGrid(void) =0;
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField &in, FermionField &out)=0;
|
||||
virtual RealD Mdag (const FermionField &in, FermionField &out)=0;
|
||||
virtual void M (const FermionField &in, FermionField &out)=0;
|
||||
virtual void Mdag (const FermionField &in, FermionField &out)=0;
|
||||
|
||||
// half checkerboard operaions
|
||||
virtual void Meooe (const FermionField &in, FermionField &out)=0;
|
||||
@ -86,15 +86,14 @@ public:
|
||||
virtual void DhopDerivEO(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0;
|
||||
virtual void DhopDerivOE(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0;
|
||||
|
||||
|
||||
virtual void Mdiag (const FermionField &in, FermionField &out) { Mooee(in,out);}; // Same as Mooee applied to both CB's
|
||||
virtual void Mdir (const FermionField &in, FermionField &out,int dir,int disp)=0; // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
|
||||
virtual void MdirAll(const FermionField &in, std::vector<FermionField> &out)=0; // case by case Wilson, Clover, Cayley, ContFrac, PartFrac
|
||||
|
||||
|
||||
virtual void MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);};
|
||||
virtual void MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);};
|
||||
|
||||
virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist)
|
||||
virtual void FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist)
|
||||
{
|
||||
FFT theFFT((GridCartesian *) in.Grid());
|
||||
|
||||
@ -148,15 +147,19 @@ public:
|
||||
virtual void ContractConservedCurrent(PropagatorField &q_in_1,
|
||||
PropagatorField &q_in_2,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &phys_src,
|
||||
Current curr_type,
|
||||
unsigned int mu)=0;
|
||||
unsigned int mu)
|
||||
{assert(0);};
|
||||
virtual void SeqConservedCurrent(PropagatorField &q_in,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &phys_src,
|
||||
Current curr_type,
|
||||
unsigned int mu,
|
||||
unsigned int tmin,
|
||||
unsigned int tmax,
|
||||
ComplexField &lattice_cmplx)=0;
|
||||
ComplexField &lattice_cmplx)
|
||||
{assert(0);};
|
||||
|
||||
// Only reimplemented in Wilson5D
|
||||
// Default to just a zero correlation function
|
||||
|
@ -153,8 +153,8 @@ public:
|
||||
typedef typename Impl::StencilImpl StencilImpl; \
|
||||
typedef typename Impl::ImplParams ImplParams; \
|
||||
typedef typename Impl::StencilImpl::View_type StencilView; \
|
||||
typedef typename ViewMap<FermionField>::Type FermionFieldView; \
|
||||
typedef typename ViewMap<DoubledGaugeField>::Type DoubledGaugeFieldView;
|
||||
typedef const typename ViewMap<FermionField>::Type FermionFieldView; \
|
||||
typedef const typename ViewMap<DoubledGaugeField>::Type DoubledGaugeFieldView;
|
||||
|
||||
#define INHERIT_IMPL_TYPES(Base) \
|
||||
INHERIT_GIMPL_TYPES(Base) \
|
||||
|
@ -38,6 +38,7 @@ public:
|
||||
static const bool isFundamental = Representation::isFundamental;
|
||||
static const int Nhcs = Options::Nhcs;
|
||||
static const bool LsVectorised=false;
|
||||
static const bool isGparity=true;
|
||||
|
||||
typedef ConjugateGaugeImpl< GaugeImplTypes<S,Dimension> > Gimpl;
|
||||
INHERIT_GIMPL_TYPES(Gimpl);
|
||||
@ -46,7 +47,7 @@ public:
|
||||
typedef typename Options::template PrecisionMapper<Simd>::LowerPrecVector SimdL;
|
||||
|
||||
template <typename vtype> using iImplSpinor = iVector<iVector<iVector<vtype, Dimension>, Ns>, Ngp>;
|
||||
template <typename vtype> using iImplPropagator = iVector<iMatrix<iMatrix<vtype, Dimension>, Ns>, Ngp>;
|
||||
template <typename vtype> using iImplPropagator = iMatrix<iMatrix<iMatrix<vtype, Dimension>, Ns>, Ngp>;
|
||||
template <typename vtype> using iImplHalfSpinor = iVector<iVector<iVector<vtype, Dimension>, Nhs>, Ngp>;
|
||||
template <typename vtype> using iImplHalfCommSpinor = iVector<iVector<iVector<vtype, Dimension>, Nhcs>, Ngp>;
|
||||
template <typename vtype> using iImplDoubledGaugeField = iVector<iVector<iScalar<iMatrix<vtype, Dimension> >, Nds>, Ngp>;
|
||||
@ -80,6 +81,7 @@ public:
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
|
||||
template<class _Spinor>
|
||||
static accelerator_inline void multLink(_Spinor &phi,
|
||||
const SiteDoubledGaugeField &U,
|
||||
@ -94,43 +96,31 @@ public:
|
||||
int sl = St._simd_layout[direction];
|
||||
Coordinate icoor;
|
||||
|
||||
#ifdef __CUDA_ARCH__
|
||||
_Spinor tmp;
|
||||
|
||||
#ifdef GRID_SIMT
|
||||
const int Nsimd =SiteDoubledGaugeField::Nsimd();
|
||||
int s = SIMTlane(Nsimd);
|
||||
int s = acceleratorSIMTlane(Nsimd);
|
||||
St.iCoorFromIindex(icoor,s);
|
||||
|
||||
int mmu = mu % Nd;
|
||||
if ( SE->_around_the_world && St.parameters.twists[mmu] ) {
|
||||
|
||||
int permute_lane = (sl==1)
|
||||
|| ((distance== 1)&&(icoor[direction]==1))
|
||||
|| ((distance==-1)&&(icoor[direction]==0));
|
||||
|
||||
if ( permute_lane ) {
|
||||
tmp(0) = chi(1);
|
||||
tmp(1) = chi(0);
|
||||
} else {
|
||||
tmp(0) = chi(0);
|
||||
tmp(1) = chi(1);
|
||||
}
|
||||
auto UU0=coalescedRead(U(0)(mu));
|
||||
auto UU1=coalescedRead(U(1)(mu));
|
||||
|
||||
//Decide whether we do a G-parity flavor twist
|
||||
//Note: this assumes (but does not check) that sl==1 || sl==2 i.e. max 2 SIMD lanes in G-parity dir
|
||||
//It also assumes (but does not check) that abs(distance) == 1
|
||||
int permute_lane = (sl==1)
|
||||
|| ((distance== 1)&&(icoor[direction]==1))
|
||||
|| ((distance==-1)&&(icoor[direction]==0));
|
||||
|
||||
auto UU0=coalescedRead(U(0)(mu));
|
||||
auto UU1=coalescedRead(U(1)(mu));
|
||||
permute_lane = permute_lane && SE->_around_the_world && St.parameters.twists[mmu]; //only if we are going around the world
|
||||
|
||||
mult(&phi(0),&UU0,&tmp(0));
|
||||
mult(&phi(1),&UU1,&tmp(1));
|
||||
//Apply the links
|
||||
int f_upper = permute_lane ? 1 : 0;
|
||||
int f_lower = !f_upper;
|
||||
|
||||
} else {
|
||||
|
||||
auto UU0=coalescedRead(U(0)(mu));
|
||||
auto UU1=coalescedRead(U(1)(mu));
|
||||
|
||||
mult(&phi(0),&UU0,&chi(0));
|
||||
mult(&phi(1),&UU1,&chi(1));
|
||||
|
||||
}
|
||||
mult(&phi(0),&UU0,&chi(f_upper));
|
||||
mult(&phi(1),&UU1,&chi(f_lower));
|
||||
|
||||
#else
|
||||
typedef _Spinor vobj;
|
||||
@ -191,6 +181,16 @@ public:
|
||||
#endif
|
||||
}
|
||||
|
||||
|
||||
template<class _SpinorField>
|
||||
inline void multLinkField(_SpinorField & out,
|
||||
const DoubledGaugeField &Umu,
|
||||
const _SpinorField & phi,
|
||||
int mu)
|
||||
{
|
||||
assert(0);
|
||||
}
|
||||
|
||||
template <class ref>
|
||||
static accelerator_inline void loadLinkElement(Simd ®, ref &memory)
|
||||
{
|
||||
@ -220,15 +220,17 @@ public:
|
||||
if ( Params.twists[mu] ) {
|
||||
Uconj = where(coor==neglink,-Uconj,Uconj);
|
||||
}
|
||||
|
||||
auto U_v = U.View();
|
||||
auto Uds_v = Uds.View();
|
||||
auto Uconj_v = Uconj.View();
|
||||
auto Utmp_v= Utmp.View();
|
||||
thread_foreach(ss,U_v,{
|
||||
Uds_v[ss](0)(mu) = U_v[ss]();
|
||||
Uds_v[ss](1)(mu) = Uconj_v[ss]();
|
||||
});
|
||||
|
||||
{
|
||||
autoView( U_v , U, CpuRead);
|
||||
autoView( Uconj_v , Uconj, CpuRead);
|
||||
autoView( Uds_v , Uds, CpuWrite);
|
||||
autoView( Utmp_v, Utmp, CpuWrite);
|
||||
thread_foreach(ss,U_v,{
|
||||
Uds_v[ss](0)(mu) = U_v[ss]();
|
||||
Uds_v[ss](1)(mu) = Uconj_v[ss]();
|
||||
});
|
||||
}
|
||||
|
||||
U = adj(Cshift(U ,mu,-1)); // correct except for spanning the boundary
|
||||
Uconj = adj(Cshift(Uconj,mu,-1));
|
||||
@ -238,19 +240,25 @@ public:
|
||||
Utmp = where(coor==0,Uconj,Utmp);
|
||||
}
|
||||
|
||||
thread_foreach(ss,Utmp_v,{
|
||||
Uds_v[ss](0)(mu+4) = Utmp_v[ss]();
|
||||
});
|
||||
|
||||
{
|
||||
autoView( Uds_v , Uds, CpuWrite);
|
||||
autoView( Utmp_v, Utmp, CpuWrite);
|
||||
thread_foreach(ss,Utmp_v,{
|
||||
Uds_v[ss](0)(mu+4) = Utmp_v[ss]();
|
||||
});
|
||||
}
|
||||
Utmp = Uconj;
|
||||
if ( Params.twists[mu] ) {
|
||||
Utmp = where(coor==0,U,Utmp);
|
||||
}
|
||||
|
||||
thread_foreach(ss,Utmp_v,{
|
||||
Uds_v[ss](1)(mu+4) = Utmp_v[ss]();
|
||||
});
|
||||
|
||||
|
||||
{
|
||||
autoView( Uds_v , Uds, CpuWrite);
|
||||
autoView( Utmp_v, Utmp, CpuWrite);
|
||||
thread_foreach(ss,Utmp_v,{
|
||||
Uds_v[ss](1)(mu+4) = Utmp_v[ss]();
|
||||
});
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@ -260,11 +268,14 @@ public:
|
||||
GaugeLinkField link(mat.Grid());
|
||||
// use lorentz for flavour as hack.
|
||||
auto tmp = TraceIndex<SpinIndex>(outerProduct(Btilde, A));
|
||||
auto link_v = link.View();
|
||||
auto tmp_v = tmp.View();
|
||||
thread_foreach(ss,tmp_v,{
|
||||
link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1));
|
||||
});
|
||||
|
||||
{
|
||||
autoView( link_v , link, CpuWrite);
|
||||
autoView( tmp_v , tmp, CpuRead);
|
||||
thread_foreach(ss,tmp_v,{
|
||||
link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1));
|
||||
});
|
||||
}
|
||||
PokeIndex<LorentzIndex>(mat, link, mu);
|
||||
return;
|
||||
}
|
||||
@ -294,16 +305,18 @@ public:
|
||||
|
||||
GaugeLinkField tmp(mat.Grid());
|
||||
tmp = Zero();
|
||||
auto tmp_v = tmp.View();
|
||||
auto Atilde_v = Atilde.View();
|
||||
auto Btilde_v = Btilde.View();
|
||||
thread_for(ss,tmp.Grid()->oSites(),{
|
||||
for (int s = 0; s < Ls; s++) {
|
||||
int sF = s + Ls * ss;
|
||||
auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF]));
|
||||
tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1));
|
||||
}
|
||||
});
|
||||
{
|
||||
autoView( tmp_v , tmp, CpuWrite);
|
||||
autoView( Atilde_v , Atilde, CpuRead);
|
||||
autoView( Btilde_v , Btilde, CpuRead);
|
||||
thread_for(ss,tmp.Grid()->oSites(),{
|
||||
for (int s = 0; s < Ls; s++) {
|
||||
int sF = s + Ls * ss;
|
||||
auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF]));
|
||||
tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1));
|
||||
}
|
||||
});
|
||||
}
|
||||
PokeIndex<LorentzIndex>(mat, tmp, mu);
|
||||
return;
|
||||
}
|
||||
|
@ -71,8 +71,8 @@ public:
|
||||
// override multiply; cut number routines if pass dagger argument
|
||||
// and also make interface more uniformly consistent
|
||||
//////////////////////////////////////////////////////////////////
|
||||
RealD M(const FermionField &in, FermionField &out);
|
||||
RealD Mdag(const FermionField &in, FermionField &out);
|
||||
void M(const FermionField &in, FermionField &out);
|
||||
void Mdag(const FermionField &in, FermionField &out);
|
||||
|
||||
/////////////////////////////////////////////////////////
|
||||
// half checkerboard operations
|
||||
@ -185,10 +185,12 @@ public:
|
||||
void ContractConservedCurrent(PropagatorField &q_in_1,
|
||||
PropagatorField &q_in_2,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &src,
|
||||
Current curr_type,
|
||||
unsigned int mu);
|
||||
void SeqConservedCurrent(PropagatorField &q_in,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &srct,
|
||||
Current curr_type,
|
||||
unsigned int mu,
|
||||
unsigned int tmin,
|
||||
|
@ -1,4 +1,3 @@
|
||||
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
@ -62,8 +61,8 @@ public:
|
||||
double DhopCalls;
|
||||
double DhopCommTime;
|
||||
double DhopComputeTime;
|
||||
double DhopComputeTime2;
|
||||
double DhopFaceTime;
|
||||
double DhopComputeTime2;
|
||||
double DhopFaceTime;
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Implement the abstract base
|
||||
@ -74,8 +73,8 @@ public:
|
||||
GridBase *FermionRedBlackGrid(void) { return _FiveDimRedBlackGrid;}
|
||||
|
||||
// full checkerboard operations; leave unimplemented as abstract for now
|
||||
RealD M (const FermionField &in, FermionField &out);
|
||||
RealD Mdag (const FermionField &in, FermionField &out);
|
||||
void M (const FermionField &in, FermionField &out);
|
||||
void Mdag (const FermionField &in, FermionField &out);
|
||||
|
||||
// half checkerboard operations
|
||||
void Meooe (const FermionField &in, FermionField &out);
|
||||
@ -209,7 +208,7 @@ public:
|
||||
LebesgueOrder LebesgueEvenOdd;
|
||||
|
||||
// Comms buffer
|
||||
std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> > comm_buf;
|
||||
// std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> > comm_buf;
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Conserved current utilities
|
||||
@ -217,15 +216,17 @@ public:
|
||||
void ContractConservedCurrent(PropagatorField &q_in_1,
|
||||
PropagatorField &q_in_2,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &src,
|
||||
Current curr_type,
|
||||
unsigned int mu);
|
||||
void SeqConservedCurrent(PropagatorField &q_in,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &src,
|
||||
Current curr_type,
|
||||
unsigned int mu,
|
||||
unsigned int tmin,
|
||||
unsigned int tmax,
|
||||
ComplexField &lattice_cmplx);
|
||||
unsigned int tmax,
|
||||
ComplexField &lattice_cmplx);
|
||||
};
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
@ -40,6 +40,11 @@ inline void convert(const Fieldi &from,Fieldo &to)
|
||||
to=from;
|
||||
}
|
||||
|
||||
struct MADWFinnerIterCallbackBase{
|
||||
virtual void operator()(const RealD current_resid){}
|
||||
virtual ~MADWFinnerIterCallbackBase(){}
|
||||
};
|
||||
|
||||
template<class Matrixo,class Matrixi,class PVinverter,class SchurSolver, class Guesser>
|
||||
class MADWF
|
||||
{
|
||||
@ -56,25 +61,31 @@ class MADWF
|
||||
|
||||
RealD target_resid;
|
||||
int maxiter;
|
||||
public:
|
||||
|
||||
//operator() is called on "callback" at the end of every inner iteration. This allows for example the adjustment of the inner
|
||||
//tolerance to speed up subsequent iteration
|
||||
MADWFinnerIterCallbackBase* callback;
|
||||
|
||||
public:
|
||||
MADWF(Matrixo &_Mato,
|
||||
Matrixi &_Mati,
|
||||
PVinverter &_PauliVillarsSolvero,
|
||||
Matrixi &_Mati,
|
||||
PVinverter &_PauliVillarsSolvero,
|
||||
SchurSolver &_SchurSolveri,
|
||||
Guesser & _Guesseri,
|
||||
RealD resid,
|
||||
int _maxiter) :
|
||||
int _maxiter,
|
||||
MADWFinnerIterCallbackBase* _callback = NULL) :
|
||||
|
||||
Mato(_Mato),Mati(_Mati),
|
||||
SchurSolveri(_SchurSolveri),
|
||||
PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri)
|
||||
{
|
||||
target_resid=resid;
|
||||
maxiter =_maxiter;
|
||||
};
|
||||
|
||||
void operator() (const FermionFieldo &src4,FermionFieldo &sol5)
|
||||
PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri),
|
||||
callback(_callback)
|
||||
{
|
||||
target_resid=resid;
|
||||
maxiter =_maxiter;
|
||||
};
|
||||
|
||||
void operator() (const FermionFieldo &src,FermionFieldo &sol5)
|
||||
{
|
||||
std::cout << GridLogMessage<< " ************************************************" << std::endl;
|
||||
std::cout << GridLogMessage<< " MADWF-like algorithm " << std::endl;
|
||||
@ -103,8 +114,16 @@ class MADWF
|
||||
///////////////////////////////////////
|
||||
//Import source, include Dminus factors
|
||||
///////////////////////////////////////
|
||||
Mato.ImportPhysicalFermionSource(src4,b);
|
||||
std::cout << GridLogMessage << " src4 " <<norm2(src4)<<std::endl;
|
||||
GridBase *src_grid = src.Grid();
|
||||
|
||||
assert( (src_grid == Mato.GaugeGrid()) || (src_grid == Mato.FermionGrid()));
|
||||
|
||||
if ( src_grid == Mato.GaugeGrid() ) {
|
||||
Mato.ImportPhysicalFermionSource(src,b);
|
||||
} else {
|
||||
b=src;
|
||||
}
|
||||
std::cout << GridLogMessage << " src " <<norm2(src)<<std::endl;
|
||||
std::cout << GridLogMessage << " b " <<norm2(b)<<std::endl;
|
||||
|
||||
defect = b;
|
||||
@ -177,6 +196,8 @@ class MADWF
|
||||
std::cout << GridLogMessage << "Residual " << i << ": " << resid << std::endl;
|
||||
std::cout << GridLogMessage << "***************************************" <<std::endl;
|
||||
|
||||
if(callback != NULL) (*callback)(resid);
|
||||
|
||||
if (resid < target_resid) {
|
||||
return;
|
||||
}
|
||||
|
@ -56,8 +56,8 @@ public:
|
||||
virtual void DtildeInv (const FermionField& in, FermionField& out);
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField& in, FermionField& out);
|
||||
virtual RealD Mdag (const FermionField& in, FermionField& out);
|
||||
virtual void M (const FermionField& in, FermionField& out);
|
||||
virtual void Mdag (const FermionField& in, FermionField& out);
|
||||
|
||||
// half checkerboard operations
|
||||
virtual void Mooee (const FermionField& in, FermionField& out);
|
||||
|
@ -59,7 +59,7 @@ public:
|
||||
{
|
||||
RealD eps = 1.0;
|
||||
|
||||
std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl;
|
||||
// std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl;
|
||||
Approx::zolotarev_data *zdata = Approx::higham(eps,this->Ls);// eps is ignored for higham
|
||||
assert(zdata->n==this->Ls);
|
||||
|
||||
|
194
Grid/qcd/action/fermion/NaiveStaggeredFermion.h
Normal file
194
Grid/qcd/action/fermion/NaiveStaggeredFermion.h
Normal file
@ -0,0 +1,194 @@
|
||||
/*************************************************************************************
|
||||
|
||||
Grid physics library, www.github.com/paboyle/Grid
|
||||
|
||||
Source file: ./lib/qcd/action/fermion/ImprovedStaggered.h
|
||||
|
||||
Copyright (C) 2015
|
||||
|
||||
Author: Azusa Yamaguchi, Peter Boyle
|
||||
|
||||
This program is free software; you can redistribute it and/or modify
|
||||
it under the terms of the GNU General Public License as published by
|
||||
the Free Software Foundation; either version 2 of the License, or
|
||||
(at your option) any later version.
|
||||
|
||||
This program is distributed in the hope that it will be useful,
|
||||
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
GNU General Public License for more details.
|
||||
|
||||
You should have received a copy of the GNU General Public License along
|
||||
with this program; if not, write to the Free Software Foundation, Inc.,
|
||||
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
|
||||
|
||||
See the full license in the file "LICENSE" in the top level distribution
|
||||
directory
|
||||
*************************************************************************************/
|
||||
/* END LEGAL */
|
||||
#ifndef GRID_QCD_NAIVE_STAG_FERMION_H
|
||||
#define GRID_QCD_NAIVE_STAG_FERMION_H
|
||||
|
||||
NAMESPACE_BEGIN(Grid);
|
||||
|
||||
class NaiveStaggeredFermionStatic {
|
||||
public:
|
||||
static const std::vector<int> directions;
|
||||
static const std::vector<int> displacements;
|
||||
static const int npoint = 8;
|
||||
};
|
||||
|
||||
template <class Impl>
|
||||
class NaiveStaggeredFermion : public StaggeredKernels<Impl>, public NaiveStaggeredFermionStatic {
|
||||
public:
|
||||
INHERIT_IMPL_TYPES(Impl);
|
||||
typedef StaggeredKernels<Impl> Kernels;
|
||||
|
||||
FermionField _tmp;
|
||||
FermionField &tmp(void) { return _tmp; }
|
||||
|
||||
////////////////////////////////////////
|
||||
// Performance monitoring
|
||||
////////////////////////////////////////
|
||||
void Report(void);
|
||||
void ZeroCounters(void);
|
||||
double DhopTotalTime;
|
||||
double DhopCalls;
|
||||
double DhopCommTime;
|
||||
double DhopComputeTime;
|
||||
double DhopComputeTime2;
|
||||
double DhopFaceTime;
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Implement the abstract base
|
||||
///////////////////////////////////////////////////////////////
|
||||
GridBase *GaugeGrid(void) { return _grid; }
|
||||
GridBase *GaugeRedBlackGrid(void) { return _cbgrid; }
|
||||
GridBase *FermionGrid(void) { return _grid; }
|
||||
GridBase *FermionRedBlackGrid(void) { return _cbgrid; }
|
||||
|
||||
//////////////////////////////////////////////////////////////////
|
||||
// override multiply; cut number routines if pass dagger argument
|
||||
// and also make interface more uniformly consistent
|
||||
//////////////////////////////////////////////////////////////////
|
||||
void M(const FermionField &in, FermionField &out);
|
||||
void Mdag(const FermionField &in, FermionField &out);
|
||||
|
||||
/////////////////////////////////////////////////////////
|
||||
// half checkerboard operations
|
||||
/////////////////////////////////////////////////////////
|
||||
void Meooe(const FermionField &in, FermionField &out);
|
||||
void MeooeDag(const FermionField &in, FermionField &out);
|
||||
void Mooee(const FermionField &in, FermionField &out);
|
||||
void MooeeDag(const FermionField &in, FermionField &out);
|
||||
void MooeeInv(const FermionField &in, FermionField &out);
|
||||
void MooeeInvDag(const FermionField &in, FermionField &out);
|
||||
|
||||
////////////////////////
|
||||
// Derivative interface
|
||||
////////////////////////
|
||||
// Interface calls an internal routine
|
||||
void DhopDeriv (GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
|
||||
void DhopDerivOE(GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
|
||||
void DhopDerivEO(GaugeField &mat, const FermionField &U, const FermionField &V, int dag);
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// non-hermitian hopping term; half cb or both
|
||||
///////////////////////////////////////////////////////////////
|
||||
void Dhop (const FermionField &in, FermionField &out, int dag);
|
||||
void DhopOE(const FermionField &in, FermionField &out, int dag);
|
||||
void DhopEO(const FermionField &in, FermionField &out, int dag);
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Multigrid assistance; force term uses too
|
||||
///////////////////////////////////////////////////////////////
|
||||
void Mdir(const FermionField &in, FermionField &out, int dir, int disp);
|
||||
void MdirAll(const FermionField &in, std::vector<FermionField> &out);
|
||||
void DhopDir(const FermionField &in, FermionField &out, int dir, int disp);
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Extra methods added by derived
|
||||
///////////////////////////////////////////////////////////////
|
||||
void DerivInternal(StencilImpl &st,
|
||||
DoubledGaugeField &U,
|
||||
GaugeField &mat,
|
||||
const FermionField &A, const FermionField &B, int dag);
|
||||
|
||||
void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
|
||||
const FermionField &in, FermionField &out, int dag);
|
||||
void DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
|
||||
const FermionField &in, FermionField &out, int dag);
|
||||
void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U,
|
||||
const FermionField &in, FermionField &out, int dag);
|
||||
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
// Grid own interface Constructor
|
||||
//////////////////////////////////////////////////////////////////////////
|
||||
NaiveStaggeredFermion(GaugeField &_U, GridCartesian &Fgrid,
|
||||
GridRedBlackCartesian &Hgrid, RealD _mass,
|
||||
RealD _c1, RealD _u0,
|
||||
const ImplParams &p = ImplParams());
|
||||
NaiveStaggeredFermion(GridCartesian &Fgrid,
|
||||
GridRedBlackCartesian &Hgrid, RealD _mass,
|
||||
RealD _c1, RealD _u0,
|
||||
const ImplParams &p = ImplParams());
|
||||
|
||||
// DoubleStore impl dependent
|
||||
void ImportGauge (const GaugeField &_U );
|
||||
DoubledGaugeField &GetU(void) { return Umu ; } ;
|
||||
void CopyGaugeCheckerboards(void);
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Data members require to support the functionality
|
||||
///////////////////////////////////////////////////////////////
|
||||
|
||||
// protected:
|
||||
public:
|
||||
// any other parameters of action ???
|
||||
virtual int isTrivialEE(void) { return 1; };
|
||||
virtual RealD Mass(void) { return mass; }
|
||||
RealD mass;
|
||||
RealD u0;
|
||||
RealD c1;
|
||||
|
||||
GridBase *_grid;
|
||||
GridBase *_cbgrid;
|
||||
|
||||
// Defines the stencils for even and odd
|
||||
StencilImpl Stencil;
|
||||
StencilImpl StencilEven;
|
||||
StencilImpl StencilOdd;
|
||||
|
||||
// Copy of the gauge field , with even and odd subsets
|
||||
DoubledGaugeField Umu;
|
||||
DoubledGaugeField UmuEven;
|
||||
DoubledGaugeField UmuOdd;
|
||||
|
||||
LebesgueOrder Lebesgue;
|
||||
LebesgueOrder LebesgueEvenOdd;
|
||||
|
||||
///////////////////////////////////////////////////////////////
|
||||
// Conserved current utilities
|
||||
///////////////////////////////////////////////////////////////
|
||||
void ContractConservedCurrent(PropagatorField &q_in_1,
|
||||
PropagatorField &q_in_2,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &src,
|
||||
Current curr_type,
|
||||
unsigned int mu);
|
||||
void SeqConservedCurrent(PropagatorField &q_in,
|
||||
PropagatorField &q_out,
|
||||
PropagatorField &srct,
|
||||
Current curr_type,
|
||||
unsigned int mu,
|
||||
unsigned int tmin,
|
||||
unsigned int tmax,
|
||||
ComplexField &lattice_cmplx);
|
||||
};
|
||||
|
||||
typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF;
|
||||
typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD;
|
||||
|
||||
NAMESPACE_END(Grid);
|
||||
|
||||
#endif
|
@ -47,8 +47,8 @@ public:
|
||||
void M_internal(const FermionField &in, FermionField &out,int dag);
|
||||
|
||||
// override multiply
|
||||
virtual RealD M (const FermionField &in, FermionField &out);
|
||||
virtual RealD Mdag (const FermionField &in, FermionField &out);
|
||||
virtual void M (const FermionField &in, FermionField &out);
|
||||
virtual void Mdag (const FermionField &in, FermionField &out);
|
||||
|
||||
// half checkerboard operaions
|
||||
virtual void Meooe (const FermionField &in, FermionField &out);
|
||||
|
@ -47,23 +47,37 @@ template<class Impl> class StaggeredKernels : public FermionOperator<Impl> , pub
|
||||
INHERIT_IMPL_TYPES(Impl);
|
||||
typedef FermionOperator<Impl> Base;
|
||||
|
||||
public:
|
||||
|
||||
void DhopDirKernel(StencilImpl &st, DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, SiteSpinor * buf,
|
||||
int sF, int sU, const FermionFieldView &in, FermionFieldView &out, int dir,int disp);
|
||||
public:
|
||||
|
||||
void DhopImproved(StencilImpl &st, LebesgueOrder &lo,
|
||||
DoubledGaugeField &U, DoubledGaugeField &UUU,
|
||||
const FermionField &in, FermionField &out, int dag, int interior,int exterior);
|
||||
void DhopNaive(StencilImpl &st, LebesgueOrder &lo,
|
||||
DoubledGaugeField &U,
|
||||
const FermionField &in, FermionField &out, int dag, int interior,int exterior);
|
||||
|
||||
void DhopDirKernel(StencilImpl &st, DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU, SiteSpinor * buf,
|
||||
int sF, int sU, const FermionFieldView &in, FermionFieldView &out, int dir,int disp);
|
||||
protected:
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
// Generic Nc kernels
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
void DhopSiteGeneric(StencilImpl &st, LebesgueOrder &lo,
|
||||
template<int Naik>
|
||||
static accelerator_inline
|
||||
void DhopSiteGeneric(StencilView &st,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
void DhopSiteGenericInt(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
template<int Naik> static accelerator_inline
|
||||
void DhopSiteGenericInt(StencilView &st,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
void DhopSiteGenericExt(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
template<int Naik> static accelerator_inline
|
||||
void DhopSiteGenericExt(StencilView &st,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
@ -71,15 +85,21 @@ public:
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
// Nc=3 specific kernels
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
void DhopSiteHand(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
template<int Naik> static accelerator_inline
|
||||
void DhopSiteHand(StencilView &st,
|
||||
DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
void DhopSiteHandInt(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
template<int Naik> static accelerator_inline
|
||||
void DhopSiteHandInt(StencilView &st,
|
||||
DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
void DhopSiteHandExt(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
template<int Naik> static accelerator_inline
|
||||
void DhopSiteHandExt(StencilView &st,
|
||||
DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
@ -87,27 +107,11 @@ public:
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
// Asm Nc=3 specific kernels
|
||||
///////////////////////////////////////////////////////////////////////////////////////
|
||||
void DhopSiteAsm(StencilImpl &st, LebesgueOrder &lo,
|
||||
|
||||
void DhopSiteAsm(StencilView &st,
|
||||
DoubledGaugeFieldView &U,DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out,int dag);
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
// Generic interface; fan out to right routine
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
void DhopSite(StencilImpl &st, LebesgueOrder &lo,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out, int interior=1,int exterior=1);
|
||||
|
||||
void DhopSiteDag(StencilImpl &st, LebesgueOrder &lo,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out, int interior=1,int exterior=1);
|
||||
|
||||
void DhopSite(StencilImpl &st, LebesgueOrder &lo,
|
||||
DoubledGaugeFieldView &U, DoubledGaugeFieldView &UUU,
|
||||
SiteSpinor * buf, int LLs, int sU,
|
||||
const FermionFieldView &in, FermionFieldView &out, int dag, int interior,int exterior);
|
||||
|
||||
public:
|
||||
|
||||
|
@ -113,20 +113,7 @@ public:
|
||||
|
||||
inline void InsertGaugeField(DoubledGaugeField &U_ds,const GaugeLinkField &U,int mu)
|
||||
{
|
||||
GridBase *GaugeGrid = U_ds.Grid();
|
||||
thread_for(lidx, GaugeGrid->lSites(),{
|
||||
|
||||
SiteScalarGaugeLink ScalarU;
|
||||
SiteDoubledGaugeField ScalarUds;
|
||||
|
||||
Coordinate lcoor;
|
||||
GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor);
|
||||
peekLocalSite(ScalarUds, U_ds, lcoor);
|
||||
|
||||
peekLocalSite(ScalarU, U, lcoor);
|
||||
ScalarUds(mu) = ScalarU();
|
||||
|
||||
});
|
||||
assert(0);
|
||||
}
|
||||
inline void DoubleStore(GridBase *GaugeGrid,
|
||||
DoubledGaugeField &UUUds, // for Naik term
|
||||
|
@ -109,9 +109,8 @@ public:
|
||||
ImportGauge(_Umu);
|
||||
}
|
||||
|
||||
virtual RealD M(const FermionField &in, FermionField &out);
|
||||
virtual RealD Mdag(const FermionField &in, FermionField &out);
|
||||
|
||||
virtual void M(const FermionField &in, FermionField &out);
|
||||
virtual void Mdag(const FermionField &in, FermionField &out);
|
||||
virtual void Mooee(const FermionField &in, FermionField &out);
|
||||
virtual void MooeeDag(const FermionField &in, FermionField &out);
|
||||
virtual void MooeeInv(const FermionField &in, FermionField &out);
|
||||
@ -246,7 +245,7 @@ public:
|
||||
return out;
|
||||
}
|
||||
|
||||
private:
|
||||
protected:
|
||||
// here fixing the 4 dimensions, make it more general?
|
||||
|
||||
RealD csw_r; // Clover coefficient - spatial
|
||||
@ -258,15 +257,16 @@ private:
|
||||
CloverFieldType CloverTermDagEven, CloverTermDagOdd; // Clover term Dag EO
|
||||
CloverFieldType CloverTermInvDagEven, CloverTermInvDagOdd; // Clover term Inv Dag EO
|
||||
|
||||
public:
|
||||
// eventually these can be compressed into 6x6 blocks instead of the 12x12
|
||||
// using the DeGrand-Rossi basis for the gamma matrices
|
||||
CloverFieldType fillCloverYZ(const GaugeLinkField &F)
|
||||
{
|
||||
CloverFieldType T(F.Grid());
|
||||
T = Zero();
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView(T_v,T,AcceleratorWrite);
|
||||
autoView(F_v,F,AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 1) = timesMinusI(F_v[i]()());
|
||||
T_v[i]()(1, 0) = timesMinusI(F_v[i]()());
|
||||
@ -282,9 +282,9 @@ private:
|
||||
CloverFieldType T(F.Grid());
|
||||
T = Zero();
|
||||
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView(T_v, T,AcceleratorWrite);
|
||||
autoView(F_v, F,AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 1) = -F_v[i]()();
|
||||
T_v[i]()(1, 0) = F_v[i]()();
|
||||
@ -300,9 +300,9 @@ private:
|
||||
CloverFieldType T(F.Grid());
|
||||
T = Zero();
|
||||
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView(T_v,T,AcceleratorWrite);
|
||||
autoView(F_v,F,AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 0) = timesMinusI(F_v[i]()());
|
||||
T_v[i]()(1, 1) = timesI(F_v[i]()());
|
||||
@ -318,9 +318,9 @@ private:
|
||||
CloverFieldType T(F.Grid());
|
||||
T = Zero();
|
||||
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView( T_v , T, AcceleratorWrite);
|
||||
autoView( F_v , F, AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 1) = timesI(F_v[i]()());
|
||||
T_v[i]()(1, 0) = timesI(F_v[i]()());
|
||||
@ -336,9 +336,9 @@ private:
|
||||
CloverFieldType T(F.Grid());
|
||||
T = Zero();
|
||||
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView( T_v ,T,AcceleratorWrite);
|
||||
autoView( F_v ,F,AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 1) = -(F_v[i]()());
|
||||
T_v[i]()(1, 0) = (F_v[i]()());
|
||||
@ -355,9 +355,9 @@ private:
|
||||
|
||||
T = Zero();
|
||||
|
||||
auto T_v = T.View();
|
||||
auto F_v = F.View();
|
||||
thread_for(i, CloverTerm.Grid()->oSites(),
|
||||
autoView( T_v , T,AcceleratorWrite);
|
||||
autoView( F_v , F,AcceleratorRead);
|
||||
accelerator_for(i, CloverTerm.Grid()->oSites(),1,
|
||||
{
|
||||
T_v[i]()(0, 0) = timesI(F_v[i]()());
|
||||
T_v[i]()(1, 1) = timesMinusI(F_v[i]()());
|
||||
|
@ -61,7 +61,7 @@ public:
|
||||
typedef typename SiteHalfSpinor::vector_type vComplexHigh;
|
||||
constexpr static int Nw=sizeof(SiteHalfSpinor)/sizeof(vComplexHigh);
|
||||
|
||||
accelerator_inline int CommDatumSize(void) {
|
||||
accelerator_inline int CommDatumSize(void) const {
|
||||
return sizeof(SiteHalfCommSpinor);
|
||||
}
|
||||
|
||||
@ -69,7 +69,7 @@ public:
|
||||
/* Compress includes precision change if mpi data is not same */
|
||||
/*****************************************************/
|
||||
template<class _SiteHalfSpinor, class _SiteSpinor>
|
||||
accelerator_inline void Compress(_SiteHalfSpinor *buf,Integer o,const _SiteSpinor &in) {
|
||||
accelerator_inline void Compress(_SiteHalfSpinor *buf,Integer o,const _SiteSpinor &in) const {
|
||||
_SiteHalfSpinor tmp;
|
||||
projector::Proj(tmp,in,mu,dag);
|
||||
vstream(buf[o],tmp);
|
||||
@ -81,7 +81,7 @@ public:
|
||||
accelerator_inline void Exchange(SiteHalfSpinor *mp,
|
||||
const SiteHalfSpinor * __restrict__ vp0,
|
||||
const SiteHalfSpinor * __restrict__ vp1,
|
||||
Integer type,Integer o){
|
||||
Integer type,Integer o) const {
|
||||
SiteHalfSpinor tmp1;
|
||||
SiteHalfSpinor tmp2;
|
||||
exchange(tmp1,tmp2,vp0[o],vp1[o],type);
|
||||
@ -93,7 +93,7 @@ public:
|
||||
/* Have a decompression step if mpi data is not same */
|
||||
/*****************************************************/
|
||||
accelerator_inline void Decompress(SiteHalfSpinor * __restrict__ out,
|
||||
SiteHalfSpinor * __restrict__ in, Integer o) {
|
||||
SiteHalfSpinor * __restrict__ in, Integer o) const {
|
||||
assert(0);
|
||||
}
|
||||
|
||||
@ -103,7 +103,7 @@ public:
|
||||
accelerator_inline void CompressExchange(SiteHalfSpinor * __restrict__ out0,
|
||||
SiteHalfSpinor * __restrict__ out1,
|
||||
const SiteSpinor * __restrict__ in,
|
||||
Integer j,Integer k, Integer m,Integer type)
|
||||
Integer j,Integer k, Integer m,Integer type) const
|
||||
{
|
||||
SiteHalfSpinor temp1, temp2;
|
||||
SiteHalfSpinor temp3, temp4;
|
||||
@ -117,7 +117,7 @@ public:
|
||||
/*****************************************************/
|
||||
/* Pass the info to the stencil */
|
||||
/*****************************************************/
|
||||
accelerator_inline bool DecompressionStep(void) { return false; }
|
||||
accelerator_inline bool DecompressionStep(void) const { return false; }
|
||||
|
||||
};
|
||||
|
||||
@ -142,7 +142,7 @@ public:
|
||||
typedef typename SiteHalfSpinor::vector_type vComplexHigh;
|
||||
constexpr static int Nw=sizeof(SiteHalfSpinor)/sizeof(vComplexHigh);
|
||||
|
||||
accelerator_inline int CommDatumSize(void) {
|
||||
accelerator_inline int CommDatumSize(void) const {
|
||||
return sizeof(SiteHalfCommSpinor);
|
||||
}
|
||||
|
||||
@ -150,7 +150,7 @@ public:
|
||||
/* Compress includes precision change if mpi data is not same */
|
||||
/*****************************************************/
|
||||
template<class _SiteHalfSpinor, class _SiteSpinor>
|
||||
accelerator_inline void Compress(_SiteHalfSpinor *buf,Integer o,const _SiteSpinor &in) {
|
||||
accelerator_inline void Compress(_SiteHalfSpinor *buf,Integer o,const _SiteSpinor &in) const {
|
||||
_SiteHalfSpinor hsp;
|
||||
SiteHalfCommSpinor *hbuf = (SiteHalfCommSpinor *)buf;
|
||||
projector::Proj(hsp,in,mu,dag);
|
||||
@ -163,7 +163,7 @@ public:
|
||||
accelerator_inline void Exchange(SiteHalfSpinor *mp,
|
||||
SiteHalfSpinor *vp0,
|
||||
SiteHalfSpinor *vp1,
|
||||
Integer type,Integer o){
|
||||
Integer type,Integer o) const {
|
||||
SiteHalfSpinor vt0,vt1;
|
||||
SiteHalfCommSpinor *vpp0 = (SiteHalfCommSpinor *)vp0;
|
||||
SiteHalfCommSpinor *vpp1 = (SiteHalfCommSpinor *)vp1;
|
||||
@ -175,7 +175,7 @@ public:
|
||||
/*****************************************************/
|
||||
/* Have a decompression step if mpi data is not same */
|
||||
/*****************************************************/
|
||||
accelerator_inline void Decompress(SiteHalfSpinor *out, SiteHalfSpinor *in, Integer o){
|
||||
accelerator_inline void Decompress(SiteHalfSpinor *out, SiteHalfSpinor *in, Integer o) const {
|
||||
SiteHalfCommSpinor *hin=(SiteHalfCommSpinor *)in;
|
||||
precisionChange((vComplexHigh *)&out[o],(vComplexLow *)&hin[o],Nw);
|
||||
}
|
||||
@ -186,7 +186,7 @@ public:
|
||||
accelerator_inline void CompressExchange(SiteHalfSpinor *out0,
|
||||
SiteHalfSpinor *out1,
|
||||
const SiteSpinor *in,
|
||||
Integer j,Integer k, Integer m,Integer type){
|
||||
Integer j,Integer k, Integer m,Integer type) const {
|
||||
SiteHalfSpinor temp1, temp2,temp3,temp4;
|
||||
SiteHalfCommSpinor *hout0 = (SiteHalfCommSpinor *)out0;
|
||||
SiteHalfCommSpinor *hout1 = (SiteHalfCommSpinor *)out1;
|
||||
@ -200,7 +200,7 @@ public:
|
||||
/*****************************************************/
|
||||
/* Pass the info to the stencil */
|
||||
/*****************************************************/
|
||||
accelerator_inline bool DecompressionStep(void) { return true; }
|
||||
accelerator_inline bool DecompressionStep(void) const { return true; }
|
||||
|
||||
};
|
||||
|
||||
|
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user