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			feature/hd
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|  | 4180a4a8a7 | 
							
								
								
									
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							| @@ -88,6 +88,7 @@ Thumbs.db | |||||||
| # build directory # | # build directory # | ||||||
| ################### | ################### | ||||||
| build*/* | build*/* | ||||||
|  | Documentation/_build | ||||||
|  |  | ||||||
| # IDE related files # | # IDE related files # | ||||||
| ##################### | ##################### | ||||||
|   | |||||||
							
								
								
									
										61
									
								
								.travis.yml
									
									
									
									
									
								
							
							
						
						
									
										61
									
								
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							| @@ -1,61 +0,0 @@ | |||||||
| language: cpp |  | ||||||
|  |  | ||||||
| cache: |  | ||||||
|   directories: |  | ||||||
|     - clang |  | ||||||
|  |  | ||||||
| matrix: |  | ||||||
|   include: |  | ||||||
|     - os:        osx |  | ||||||
|       osx_image: xcode8.3 |  | ||||||
|       compiler: clang |  | ||||||
|       env: PREC=single |  | ||||||
|     - os:        osx |  | ||||||
|       osx_image: xcode8.3 |  | ||||||
|       compiler: clang |  | ||||||
|       env: PREC=double |  | ||||||
|        |  | ||||||
| before_install: |  | ||||||
|     - export GRIDDIR=`pwd` |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]] && [ ! -e clang/bin ]; then wget $CLANG_LINK; tar -xf `basename $CLANG_LINK`; mkdir clang; mv clang+*/* clang/; fi |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export PATH="${GRIDDIR}/clang/bin:${PATH}"; fi |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export LD_LIBRARY_PATH="${GRIDDIR}/clang/lib:${LD_LIBRARY_PATH}"; fi |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew update; fi |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc openssl; fi |  | ||||||
|      |  | ||||||
| install: |  | ||||||
|     - export CWD=`pwd` |  | ||||||
|     - echo $CWD |  | ||||||
|     - export CC=$CC$VERSION |  | ||||||
|     - export CXX=$CXX$VERSION |  | ||||||
|     - echo $PATH |  | ||||||
|     - which autoconf |  | ||||||
|     - autoconf  --version |  | ||||||
|     - which automake |  | ||||||
|     - automake  --version |  | ||||||
|     - which $CC |  | ||||||
|     - $CC  --version |  | ||||||
|     - which $CXX |  | ||||||
|     - $CXX --version |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export LDFLAGS='-L/usr/local/lib'; fi |  | ||||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export EXTRACONF='--with-openssl=/usr/local/opt/openssl'; fi |  | ||||||
|      |  | ||||||
| script: |  | ||||||
|     - ./bootstrap.sh |  | ||||||
|     - mkdir build |  | ||||||
|     - cd build |  | ||||||
|     - mkdir lime |  | ||||||
|     - cd lime |  | ||||||
|     - mkdir build |  | ||||||
|     - cd build |  | ||||||
|     - wget http://usqcd-software.github.io/downloads/c-lime/lime-1.3.2.tar.gz |  | ||||||
|     - tar xf lime-1.3.2.tar.gz |  | ||||||
|     - cd lime-1.3.2 |  | ||||||
|     - ./configure --prefix=$CWD/build/lime/install |  | ||||||
|     - make -j4 |  | ||||||
|     - make install |  | ||||||
|     - cd $CWD/build |  | ||||||
|     - ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF} |  | ||||||
|     - make -j4  |  | ||||||
|     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals |  | ||||||
|     - make check |  | ||||||
| @@ -37,7 +37,9 @@ directory | |||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  //disables and intel compiler specific warning (in json.hpp) |  //disables and intel compiler specific warning (in json.hpp) | ||||||
|  | #ifdef __ICC | ||||||
| #pragma warning disable 488   | #pragma warning disable 488   | ||||||
|  | #endif | ||||||
|  |  | ||||||
| #ifdef __NVCC__ | #ifdef __NVCC__ | ||||||
|  //disables nvcc specific warning in json.hpp |  //disables nvcc specific warning in json.hpp | ||||||
|   | |||||||
| @@ -47,9 +47,9 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/perfmon/PerfCount.h> | #include <Grid/perfmon/PerfCount.h> | ||||||
| #include <Grid/util/Util.h> | #include <Grid/util/Util.h> | ||||||
| #include <Grid/log/Log.h> | #include <Grid/log/Log.h> | ||||||
| #include <Grid/allocator/AlignedAllocator.h> | #include <Grid/allocator/Allocator.h> | ||||||
| #include <Grid/simd/Simd.h> | #include <Grid/simd/Simd.h> | ||||||
| #include <Grid/threads/Threads.h> | #include <Grid/threads/ThreadReduction.h> | ||||||
| #include <Grid/serialisation/Serialisation.h> | #include <Grid/serialisation/Serialisation.h> | ||||||
| #include <Grid/util/Sha.h> | #include <Grid/util/Sha.h> | ||||||
| #include <Grid/communicator/Communicator.h>  | #include <Grid/communicator/Communicator.h>  | ||||||
|   | |||||||
| @@ -6,6 +6,7 @@ | |||||||
| /////////////////// | /////////////////// | ||||||
| #include <cassert> | #include <cassert> | ||||||
| #include <complex> | #include <complex> | ||||||
|  | #include <memory> | ||||||
| #include <vector> | #include <vector> | ||||||
| #include <array> | #include <array> | ||||||
| #include <string> | #include <string> | ||||||
| @@ -27,4 +28,7 @@ | |||||||
| /////////////////// | /////////////////// | ||||||
| #include "Config.h" | #include "Config.h" | ||||||
|  |  | ||||||
|  | #ifdef TOFU | ||||||
|  | #undef GRID_COMMS_THREADS | ||||||
|  | #endif | ||||||
| #endif /* GRID_STD_H */ | #endif /* GRID_STD_H */ | ||||||
|   | |||||||
| @@ -18,12 +18,29 @@ | |||||||
| #pragma push_macro("__CUDA_ARCH__") | #pragma push_macro("__CUDA_ARCH__") | ||||||
| #pragma push_macro("__NVCC__") | #pragma push_macro("__NVCC__") | ||||||
| #pragma push_macro("__CUDACC__") | #pragma push_macro("__CUDACC__") | ||||||
|  | #undef __CUDA_ARCH__ | ||||||
| #undef __NVCC__ | #undef __NVCC__ | ||||||
| #undef __CUDACC__ | #undef __CUDACC__ | ||||||
| #undef __CUDA_ARCH__ |  | ||||||
| #define __NVCC__REDEFINE__ | #define __NVCC__REDEFINE__ | ||||||
| #endif  | #endif  | ||||||
|  |  | ||||||
|  | /* SYCL save and restore compile environment*/ | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  | #pragma push | ||||||
|  | #pragma push_macro("__SYCL_DEVICE_ONLY__") | ||||||
|  | #undef __SYCL_DEVICE_ONLY__ | ||||||
|  | #define EIGEN_DONT_VECTORIZE | ||||||
|  | //#undef EIGEN_USE_SYCL | ||||||
|  | #define __SYCL__REDEFINE__ | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | /* HIP save and restore compile environment*/ | ||||||
|  | #ifdef GRID_HIP | ||||||
|  | #pragma push | ||||||
|  | #pragma push_macro("__HIP_DEVICE_COMPILE__") | ||||||
|  | #endif | ||||||
|  | #define EIGEN_NO_HIP | ||||||
|  |  | ||||||
| #include <Grid/Eigen/Dense> | #include <Grid/Eigen/Dense> | ||||||
| #include <Grid/Eigen/unsupported/CXX11/Tensor> | #include <Grid/Eigen/unsupported/CXX11/Tensor> | ||||||
|  |  | ||||||
| @@ -35,7 +52,20 @@ | |||||||
| #pragma pop | #pragma pop | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  | /*SYCL restore*/ | ||||||
|  | #ifdef __SYCL__REDEFINE__ | ||||||
|  | #pragma pop_macro("__SYCL_DEVICE_ONLY__") | ||||||
|  | #pragma pop | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | /*HIP restore*/ | ||||||
|  | #ifdef __HIP__REDEFINE__ | ||||||
|  | #pragma pop_macro("__HIP_DEVICE_COMPILE__") | ||||||
|  | #pragma pop | ||||||
|  | #endif | ||||||
|  |  | ||||||
| #if defined __GNUC__ | #if defined __GNUC__ | ||||||
| #pragma GCC diagnostic pop | #pragma GCC diagnostic pop | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -21,7 +21,8 @@ if BUILD_HDF5 | |||||||
|   extra_headers+=serialisation/Hdf5Type.h |   extra_headers+=serialisation/Hdf5Type.h | ||||||
| endif | endif | ||||||
|  |  | ||||||
| all: version-cache |  | ||||||
|  | all: version-cache Version.h | ||||||
|  |  | ||||||
| version-cache: | version-cache: | ||||||
| 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | ||||||
| @@ -42,7 +43,7 @@ version-cache: | |||||||
| 	fi;\ | 	fi;\ | ||||||
| 	rm -f vertmp | 	rm -f vertmp | ||||||
|  |  | ||||||
| Version.h: | Version.h: version-cache | ||||||
| 	cp version-cache Version.h | 	cp version-cache Version.h | ||||||
|  |  | ||||||
| .PHONY: version-cache | .PHONY: version-cache | ||||||
| @@ -53,6 +54,19 @@ Version.h: | |||||||
| include Make.inc | include Make.inc | ||||||
| include Eigen.inc | include Eigen.inc | ||||||
|  |  | ||||||
|  | extra_sources+=$(WILS_FERMION_FILES) | ||||||
|  | extra_sources+=$(STAG_FERMION_FILES) | ||||||
|  | if BUILD_ZMOBIUS | ||||||
|  |   extra_sources+=$(ZWILS_FERMION_FILES) | ||||||
|  | endif | ||||||
|  | if BUILD_GPARITY | ||||||
|  |   extra_sources+=$(GP_FERMION_FILES) | ||||||
|  | endif | ||||||
|  | if BUILD_FERMION_REPS | ||||||
|  |   extra_sources+=$(ADJ_FERMION_FILES) | ||||||
|  |   extra_sources+=$(TWOIND_FERMION_FILES) | ||||||
|  | endif | ||||||
|  |  | ||||||
| lib_LIBRARIES = libGrid.a | lib_LIBRARIES = libGrid.a | ||||||
|  |  | ||||||
| CCFILES += $(extra_sources) | CCFILES += $(extra_sources) | ||||||
|   | |||||||
| @@ -29,9 +29,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_ALGORITHMS_H | #ifndef GRID_ALGORITHMS_H | ||||||
| #define GRID_ALGORITHMS_H | #define GRID_ALGORITHMS_H | ||||||
|  |  | ||||||
|  | NAMESPACE_CHECK(algorithms); | ||||||
| #include <Grid/algorithms/SparseMatrix.h> | #include <Grid/algorithms/SparseMatrix.h> | ||||||
| #include <Grid/algorithms/LinearOperator.h> | #include <Grid/algorithms/LinearOperator.h> | ||||||
| #include <Grid/algorithms/Preconditioner.h> | #include <Grid/algorithms/Preconditioner.h> | ||||||
|  | NAMESPACE_CHECK(SparseMatrix); | ||||||
|  |  | ||||||
| #include <Grid/algorithms/approx/Zolotarev.h> | #include <Grid/algorithms/approx/Zolotarev.h> | ||||||
| #include <Grid/algorithms/approx/Chebyshev.h> | #include <Grid/algorithms/approx/Chebyshev.h> | ||||||
| @@ -39,14 +41,20 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/algorithms/approx/Remez.h> | #include <Grid/algorithms/approx/Remez.h> | ||||||
| #include <Grid/algorithms/approx/MultiShiftFunction.h> | #include <Grid/algorithms/approx/MultiShiftFunction.h> | ||||||
| #include <Grid/algorithms/approx/Forecast.h> | #include <Grid/algorithms/approx/Forecast.h> | ||||||
|  | #include <Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  | #include <Grid/algorithms/approx/ZMobius.h> | ||||||
|  | NAMESPACE_CHECK(approx); | ||||||
| #include <Grid/algorithms/iterative/Deflation.h> | #include <Grid/algorithms/iterative/Deflation.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradient.h> | #include <Grid/algorithms/iterative/ConjugateGradient.h> | ||||||
|  | NAMESPACE_CHECK(ConjGrad); | ||||||
|  | #include <Grid/algorithms/iterative/BiCGSTAB.h> | ||||||
|  | NAMESPACE_CHECK(BiCGSTAB); | ||||||
| #include <Grid/algorithms/iterative/ConjugateResidual.h> | #include <Grid/algorithms/iterative/ConjugateResidual.h> | ||||||
| #include <Grid/algorithms/iterative/NormalEquations.h> | #include <Grid/algorithms/iterative/NormalEquations.h> | ||||||
| #include <Grid/algorithms/iterative/SchurRedBlack.h> | #include <Grid/algorithms/iterative/SchurRedBlack.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | ||||||
|  | #include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h> | ||||||
| #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | ||||||
| #include <Grid/algorithms/iterative/MinimalResidual.h> | #include <Grid/algorithms/iterative/MinimalResidual.h> | ||||||
| @@ -58,7 +66,9 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | ||||||
| #include <Grid/algorithms/iterative/PowerMethod.h> | #include <Grid/algorithms/iterative/PowerMethod.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_CHECK(PowerMethod); | ||||||
| #include <Grid/algorithms/CoarsenedMatrix.h> | #include <Grid/algorithms/CoarsenedMatrix.h> | ||||||
|  | NAMESPACE_CHECK(CoarsendMatrix); | ||||||
| #include <Grid/algorithms/FFT.h> | #include <Grid/algorithms/FFT.h> | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
										
											
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							| @@ -1,4 +1,3 @@ | |||||||
|  |  | ||||||
| /************************************************************************************* | /************************************************************************************* | ||||||
|  |  | ||||||
|     Grid physics library, www.github.com/paboyle/Grid  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
| @@ -37,7 +36,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #endif | #endif | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| template<class scalar> struct FFTW { }; | template<class scalar> struct FFTW { }; | ||||||
| @@ -138,7 +136,7 @@ public: | |||||||
|     flops=0; |     flops=0; | ||||||
|     usec =0; |     usec =0; | ||||||
|     Coordinate layout(Nd,1); |     Coordinate layout(Nd,1); | ||||||
|     sgrid = new GridCartesian(dimensions,layout,processors); |     sgrid = new GridCartesian(dimensions,layout,processors,*grid); | ||||||
|   }; |   }; | ||||||
|      |      | ||||||
|   ~FFT ( void)  { |   ~FFT ( void)  { | ||||||
| @@ -184,14 +182,14 @@ public: | |||||||
|     pencil_gd[dim] = G*processors[dim]; |     pencil_gd[dim] = G*processors[dim]; | ||||||
|        |        | ||||||
|     // Pencil global vol LxLxGxLxL per node |     // Pencil global vol LxLxGxLxL per node | ||||||
|     GridCartesian pencil_g(pencil_gd,layout,processors); |     GridCartesian pencil_g(pencil_gd,layout,processors,*vgrid); | ||||||
|        |        | ||||||
|     // Construct pencils |     // Construct pencils | ||||||
|     typedef typename vobj::scalar_object sobj; |     typedef typename vobj::scalar_object sobj; | ||||||
|     typedef typename sobj::scalar_type   scalar; |     typedef typename sobj::scalar_type   scalar; | ||||||
|        |        | ||||||
|     Lattice<sobj> pgbuf(&pencil_g); |     Lattice<sobj> pgbuf(&pencil_g); | ||||||
|     auto pgbuf_v = pgbuf.View(); |     autoView(pgbuf_v , pgbuf, CpuWrite); | ||||||
|  |  | ||||||
|     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; |     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; | ||||||
|     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; |     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; | ||||||
| @@ -232,15 +230,18 @@ public: | |||||||
|     result = source; |     result = source; | ||||||
|     int pc = processor_coor[dim]; |     int pc = processor_coor[dim]; | ||||||
|     for(int p=0;p<processors[dim];p++) { |     for(int p=0;p<processors[dim];p++) { | ||||||
|       thread_for(idx, sgrid->lSites(),{ |       { | ||||||
|  | 	autoView(r_v,result,CpuRead); | ||||||
|  | 	autoView(p_v,pgbuf,CpuWrite); | ||||||
|  | 	thread_for(idx, sgrid->lSites(),{ | ||||||
|           Coordinate cbuf(Nd); |           Coordinate cbuf(Nd); | ||||||
|           sobj s; |           sobj s; | ||||||
| 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | ||||||
| 	  peekLocalSite(s,result,cbuf); | 	  peekLocalSite(s,r_v,cbuf); | ||||||
| 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | ||||||
| 	  //            cbuf[dim]+=p*L; | 	  pokeLocalSite(s,p_v,cbuf); | ||||||
| 	  pokeLocalSite(s,pgbuf,cbuf); |         }); | ||||||
|       }); |       } | ||||||
|       if (p != processors[dim] - 1) { |       if (p != processors[dim] - 1) { | ||||||
| 	result = Cshift(result,dim,L); | 	result = Cshift(result,dim,L); | ||||||
|       } |       } | ||||||
| @@ -269,15 +270,19 @@ public: | |||||||
|     flops+= flops_call*NN; |     flops+= flops_call*NN; | ||||||
|        |        | ||||||
|     // writing out result |     // writing out result | ||||||
|     thread_for(idx,sgrid->lSites(),{ |     { | ||||||
|  |       autoView(pgbuf_v,pgbuf,CpuRead); | ||||||
|  |       autoView(result_v,result,CpuWrite); | ||||||
|  |       thread_for(idx,sgrid->lSites(),{ | ||||||
| 	Coordinate clbuf(Nd), cgbuf(Nd); | 	Coordinate clbuf(Nd), cgbuf(Nd); | ||||||
| 	sobj s; | 	sobj s; | ||||||
| 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | ||||||
| 	cgbuf = clbuf; | 	cgbuf = clbuf; | ||||||
| 	cgbuf[dim] = clbuf[dim]+L*pc; | 	cgbuf[dim] = clbuf[dim]+L*pc; | ||||||
| 	peekLocalSite(s,pgbuf,cgbuf); | 	peekLocalSite(s,pgbuf_v,cgbuf); | ||||||
| 	pokeLocalSite(s,result,clbuf); | 	pokeLocalSite(s,result_v,clbuf); | ||||||
|     }); |       }); | ||||||
|  |     } | ||||||
|     result = result*div; |     result = result*div; | ||||||
|        |        | ||||||
|     // destroying plan |     // destroying plan | ||||||
|   | |||||||
| @@ -43,7 +43,6 @@ NAMESPACE_BEGIN(Grid); | |||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class Field> class LinearOperatorBase { | template<class Field> class LinearOperatorBase { | ||||||
| public: | public: | ||||||
|  |  | ||||||
|   // Support for coarsening to a multigrid |   // Support for coarsening to a multigrid | ||||||
|   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base |   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base | ||||||
|   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base |   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base | ||||||
| @@ -94,7 +93,10 @@ public: | |||||||
|     _Mat.Mdag(in,out); |     _Mat.Mdag(in,out); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|     _Mat.MdagM(in,out,n1,n2); |     _Mat.MdagM(in,out); | ||||||
|  |     ComplexD dot = innerProduct(in,out); | ||||||
|  |     n1=real(dot); | ||||||
|  |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   void HermOp(const Field &in, Field &out){ |   void HermOp(const Field &in, Field &out){ | ||||||
|     _Mat.MdagM(in,out); |     _Mat.MdagM(in,out); | ||||||
| @@ -131,17 +133,14 @@ public: | |||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|     _Mat.MdagM(in,out,n1,n2); |     HermOp(in,out); | ||||||
|     out = out + _shift*in; |     ComplexD dot = innerProduct(in,out); | ||||||
|  |  | ||||||
|     ComplexD dot;	 |  | ||||||
|     dot= innerProduct(in,out); |  | ||||||
|     n1=real(dot); |     n1=real(dot); | ||||||
|     n2=norm2(out); |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   void HermOp(const Field &in, Field &out){ |   void HermOp(const Field &in, Field &out){ | ||||||
|     RealD n1,n2; |     _Mat.MdagM(in,out); | ||||||
|     HermOpAndNorm(in,out,n1,n2); |     out = out + _shift*in; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -170,7 +169,7 @@ public: | |||||||
|     _Mat.M(in,out); |     _Mat.M(in,out); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|     _Mat.M(in,out); |     HermOp(in,out); | ||||||
|     ComplexD dot= innerProduct(in,out); n1=real(dot); |     ComplexD dot= innerProduct(in,out); n1=real(dot); | ||||||
|     n2=norm2(out); |     n2=norm2(out); | ||||||
|   } |   } | ||||||
| @@ -208,212 +207,305 @@ public: | |||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
|     ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
|     // Even Odd Schur decomp operators; there are several | // Even Odd Schur decomp operators; there are several | ||||||
|     // ways to introduce the even odd checkerboarding | // ways to introduce the even odd checkerboarding | ||||||
|     ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|     template<class Field> | template<class Field> | ||||||
|     class SchurOperatorBase :  public LinearOperatorBase<Field> { | class SchurOperatorBase :  public LinearOperatorBase<Field> { | ||||||
|     public: |  public: | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) =0; |   virtual  void Mpc      (const Field &in, Field &out) =0; | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out) =0; |   virtual  void MpcDag   (const Field &in, Field &out) =0; | ||||||
|       virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { |   virtual  void MpcDagMpc(const Field &in, Field &out) { | ||||||
|       Field tmp(in.Grid()); |     Field tmp(in.Grid()); | ||||||
|       tmp.Checkerboard() = in.Checkerboard(); |     tmp.Checkerboard() = in.Checkerboard(); | ||||||
| 	ni=Mpc(in,tmp); |     Mpc(in,tmp); | ||||||
| 	no=MpcDag(tmp,out); |     MpcDag(tmp,out); | ||||||
|       } |   } | ||||||
|       virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |  | ||||||
|       out.Checkerboard() = in.Checkerboard(); |  | ||||||
| 	MpcDagMpc(in,out,n1,n2); |  | ||||||
|       } |  | ||||||
|       virtual void HermOp(const Field &in, Field &out){ |  | ||||||
| 	RealD n1,n2; |  | ||||||
| 	HermOpAndNorm(in,out,n1,n2); |  | ||||||
|       } |  | ||||||
|       void Op     (const Field &in, Field &out){ |  | ||||||
| 	Mpc(in,out); |  | ||||||
|       } |  | ||||||
|       void AdjOp     (const Field &in, Field &out){  |  | ||||||
| 	MpcDag(in,out); |  | ||||||
|       } |  | ||||||
|       // Support for coarsening to a multigrid |  | ||||||
|       void OpDiag (const Field &in, Field &out) { |  | ||||||
| 	assert(0); // must coarsen the unpreconditioned system |  | ||||||
|       } |  | ||||||
|       void OpDir  (const Field &in, Field &out,int dir,int disp) { |  | ||||||
| 	assert(0); |  | ||||||
|       } |  | ||||||
|       void OpDirAll  (const Field &in, std::vector<Field> &out){ |  | ||||||
| 	assert(0); |  | ||||||
|       }; |  | ||||||
|     }; |  | ||||||
|     template<class Matrix,class Field> |  | ||||||
|     class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { |  | ||||||
|     public: |  | ||||||
|       Matrix &_Mat; |  | ||||||
|       SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; |  | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |  | ||||||
|       Field tmp(in.Grid()); |  | ||||||
|       tmp.Checkerboard() = !in.Checkerboard(); |  | ||||||
| 	//std::cout <<"grid pointers: in._grid="<< in._grid << " out._grid=" << out._grid << "  _Mat.Grid=" << _Mat.Grid() << " _Mat.RedBlackGrid=" << _Mat.RedBlackGrid() << std::endl; |  | ||||||
|  |  | ||||||
| 	_Mat.Meooe(in,tmp); |  | ||||||
| 	_Mat.MooeeInv(tmp,out); |  | ||||||
| 	_Mat.Meooe(out,tmp); |  | ||||||
|  |  | ||||||
|       //std::cout << "cb in " << in.Checkerboard() << "  cb out " << out.Checkerboard() << std::endl; |  | ||||||
| 	_Mat.Mooee(in,out); |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,out); |  | ||||||
|       } |  | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |  | ||||||
| 	Field tmp(in.Grid()); |  | ||||||
|  |  | ||||||
| 	_Mat.MeooeDag(in,tmp); |  | ||||||
|         _Mat.MooeeInvDag(tmp,out); |  | ||||||
| 	_Mat.MeooeDag(out,tmp); |  | ||||||
|  |  | ||||||
| 	_Mat.MooeeDag(in,out); |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,out); |  | ||||||
|       } |  | ||||||
|     }; |  | ||||||
|     template<class Matrix,class Field> |  | ||||||
|       class SchurDiagOneOperator :  public SchurOperatorBase<Field> { |  | ||||||
|     protected: |  | ||||||
|       Matrix &_Mat; |  | ||||||
|     public: |  | ||||||
|       SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; |  | ||||||
|  |  | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |  | ||||||
| 	Field tmp(in.Grid()); |  | ||||||
|  |  | ||||||
| 	_Mat.Meooe(in,out); |  | ||||||
| 	_Mat.MooeeInv(out,tmp); |  | ||||||
| 	_Mat.Meooe(tmp,out); |  | ||||||
| 	_Mat.MooeeInv(out,tmp); |  | ||||||
|  |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|       } |  | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |  | ||||||
| 	Field tmp(in.Grid()); |  | ||||||
|  |  | ||||||
| 	_Mat.MooeeInvDag(in,out); |  | ||||||
| 	_Mat.MeooeDag(out,tmp); |  | ||||||
| 	_Mat.MooeeInvDag(tmp,out); |  | ||||||
| 	_Mat.MeooeDag(out,tmp); |  | ||||||
|  |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|       } |  | ||||||
|     }; |  | ||||||
|     template<class Matrix,class Field> |  | ||||||
|       class SchurDiagTwoOperator :  public SchurOperatorBase<Field> { |  | ||||||
|     protected: |  | ||||||
|       Matrix &_Mat; |  | ||||||
|     public: |  | ||||||
|       SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; |  | ||||||
|  |  | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |  | ||||||
| 	Field tmp(in.Grid()); |  | ||||||
|  |  | ||||||
| 	_Mat.MooeeInv(in,out); |  | ||||||
| 	_Mat.Meooe(out,tmp); |  | ||||||
| 	_Mat.MooeeInv(tmp,out); |  | ||||||
| 	_Mat.Meooe(out,tmp); |  | ||||||
|  |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|       } |  | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |  | ||||||
| 	Field tmp(in.Grid()); |  | ||||||
|  |  | ||||||
| 	_Mat.MeooeDag(in,out); |  | ||||||
| 	_Mat.MooeeInvDag(out,tmp); |  | ||||||
| 	_Mat.MeooeDag(tmp,out); |  | ||||||
| 	_Mat.MooeeInvDag(out,tmp); |  | ||||||
|  |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|       } |  | ||||||
|     }; |  | ||||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|     // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta |  | ||||||
|     // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi |  | ||||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|     template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; |  | ||||||
|     template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; |  | ||||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|     //  Staggered use |  | ||||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|     template<class Matrix,class Field> |  | ||||||
|       class SchurStaggeredOperator :  public SchurOperatorBase<Field> { |  | ||||||
|     protected: |  | ||||||
|       Matrix &_Mat; |  | ||||||
|       Field tmp; |  | ||||||
|       RealD mass; |  | ||||||
|       double tMpc; |  | ||||||
|       double tIP; |  | ||||||
|       double tMeo; |  | ||||||
|       double taxpby_norm; |  | ||||||
|       uint64_t ncall; |  | ||||||
| public: |  | ||||||
|       void Report(void) |  | ||||||
|       { |  | ||||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.Mpc "<< tMpc/ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.IP  "<< tIP /ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " Mpc.MeoMoe        "<< tMeo/ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " Mpc.axpby_norm    "<< taxpby_norm/ncall<<" usec "<<std::endl; |  | ||||||
|       } |  | ||||||
|       SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  |  | ||||||
|       {  |  | ||||||
| 	assert( _Mat.isTrivialEE() ); |  | ||||||
| 	mass = _Mat.Mass(); |  | ||||||
| 	tMpc=0; |  | ||||||
| 	tIP =0; |  | ||||||
|         tMeo=0; |  | ||||||
|         taxpby_norm=0; |  | ||||||
| 	ncall=0; |  | ||||||
|       } |  | ||||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
| 	ncall++; |     out.Checkerboard() = in.Checkerboard(); | ||||||
| 	tMpc-=usecond(); |     MpcDagMpc(in,out); | ||||||
|     n2 = Mpc(in,out); |  | ||||||
| 	tMpc+=usecond(); |  | ||||||
| 	tIP-=usecond(); |  | ||||||
|     ComplexD dot= innerProduct(in,out);  |     ComplexD dot= innerProduct(in,out);  | ||||||
| 	tIP+=usecond(); |     n1=real(dot); | ||||||
|     n1 = real(dot); |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   virtual void HermOp(const Field &in, Field &out){ |   virtual void HermOp(const Field &in, Field &out){ | ||||||
| 	ncall++; |     out.Checkerboard() = in.Checkerboard(); | ||||||
| 	tMpc-=usecond(); |     MpcDagMpc(in,out); | ||||||
| 	_Mat.Meooe(in,out); |  | ||||||
| 	_Mat.Meooe(out,tmp); |  | ||||||
| 	tMpc+=usecond(); |  | ||||||
| 	taxpby_norm-=usecond(); |  | ||||||
| 	axpby(out,-1.0,mass*mass,tmp,in); |  | ||||||
| 	taxpby_norm+=usecond(); |  | ||||||
|   } |   } | ||||||
|   virtual  RealD Mpc      (const Field &in, Field &out)  |   void Op     (const Field &in, Field &out){ | ||||||
|   { |     Mpc(in,out); | ||||||
|  |   } | ||||||
|  |   void AdjOp     (const Field &in, Field &out){  | ||||||
|  |     MpcDag(in,out); | ||||||
|  |   } | ||||||
|  |   // Support for coarsening to a multigrid | ||||||
|  |   void OpDiag (const Field &in, Field &out) { | ||||||
|  |     assert(0); // must coarsen the unpreconditioned system | ||||||
|  |   } | ||||||
|  |   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     assert(0); | ||||||
|  |   }; | ||||||
|  | }; | ||||||
|  | template<class Matrix,class Field> | ||||||
|  |   class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { | ||||||
|  |  public: | ||||||
|  |     Matrix &_Mat; | ||||||
|  |     SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|  |     virtual  void Mpc      (const Field &in, Field &out) { | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  |       tmp.Checkerboard() = !in.Checkerboard(); | ||||||
|        |        | ||||||
|  |       _Mat.Meooe(in,tmp); | ||||||
|  |       _Mat.MooeeInv(tmp,out); | ||||||
|  |       _Mat.Meooe(out,tmp); | ||||||
|  |       _Mat.Mooee(in,out); | ||||||
|  |       axpy(out,-1.0,tmp,out); | ||||||
|  |     } | ||||||
|  |     virtual void MpcDag   (const Field &in, Field &out){ | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  | 	 | ||||||
|  |       _Mat.MeooeDag(in,tmp); | ||||||
|  |       _Mat.MooeeInvDag(tmp,out); | ||||||
|  |       _Mat.MeooeDag(out,tmp); | ||||||
|  |       _Mat.MooeeDag(in,out); | ||||||
|  |       axpy(out,-1.0,tmp,out); | ||||||
|  |     } | ||||||
|  | }; | ||||||
|  | template<class Matrix,class Field> | ||||||
|  |   class SchurDiagOneOperator :  public SchurOperatorBase<Field> { | ||||||
|  |  protected: | ||||||
|  |     Matrix &_Mat; | ||||||
|  |  public: | ||||||
|  |     SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|  |      | ||||||
|  |     virtual void Mpc      (const Field &in, Field &out) { | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  |  | ||||||
|  |       _Mat.Meooe(in,out); | ||||||
|  |       _Mat.MooeeInv(out,tmp); | ||||||
|  |       _Mat.Meooe(tmp,out); | ||||||
|  |       _Mat.MooeeInv(out,tmp); | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
|  |     } | ||||||
|  |     virtual void MpcDag   (const Field &in, Field &out){ | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  |        | ||||||
|  |       _Mat.MooeeInvDag(in,out); | ||||||
|  |       _Mat.MeooeDag(out,tmp); | ||||||
|  |       _Mat.MooeeInvDag(tmp,out); | ||||||
|  |       _Mat.MeooeDag(out,tmp); | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
|  |     } | ||||||
|  | }; | ||||||
|  | template<class Matrix,class Field> | ||||||
|  |   class SchurDiagTwoOperator :  public SchurOperatorBase<Field> { | ||||||
|  |  protected: | ||||||
|  |     Matrix &_Mat; | ||||||
|  |  public: | ||||||
|  |     SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|  |      | ||||||
|  |     virtual void Mpc      (const Field &in, Field &out) { | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  |        | ||||||
|  |       _Mat.MooeeInv(in,out); | ||||||
|  |       _Mat.Meooe(out,tmp); | ||||||
|  |       _Mat.MooeeInv(tmp,out); | ||||||
|  |       _Mat.Meooe(out,tmp); | ||||||
|  |        | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
|  |     } | ||||||
|  |     virtual  void MpcDag   (const Field &in, Field &out){ | ||||||
|  |       Field tmp(in.Grid()); | ||||||
|  |  | ||||||
|  |       _Mat.MeooeDag(in,out); | ||||||
|  |       _Mat.MooeeInvDag(out,tmp); | ||||||
|  |       _Mat.MeooeDag(tmp,out); | ||||||
|  |       _Mat.MooeeInvDag(out,tmp); | ||||||
|  |  | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
|  |     } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class NonHermitianSchurOperatorBase :  public LinearOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  public: | ||||||
|  |   virtual void  Mpc      (const Field& in, Field& out) = 0; | ||||||
|  |   virtual void  MpcDag   (const Field& in, Field& out) = 0; | ||||||
|  |   virtual void  MpcDagMpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |     tmp.Checkerboard() = in.Checkerboard(); | ||||||
|  |     Mpc(in,tmp); | ||||||
|  |     MpcDag(tmp,out); | ||||||
|  |   } | ||||||
|  |   virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   virtual void HermOp(const Field& in, Field& out) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void Op(const Field& in, Field& out) { | ||||||
|  |     Mpc(in, out); | ||||||
|  |   } | ||||||
|  |   void AdjOp(const Field& in, Field& out) {  | ||||||
|  |     MpcDag(in, out); | ||||||
|  |   } | ||||||
|  |   // Support for coarsening to a multigrid | ||||||
|  |   void OpDiag(const Field& in, Field& out) { | ||||||
|  |     assert(0); // must coarsen the unpreconditioned system | ||||||
|  |   } | ||||||
|  |   void OpDir(const Field& in, Field& out, int dir, int disp) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void OpDirAll(const Field& in, std::vector<Field>& out){ | ||||||
|  |     assert(0); | ||||||
|  |   }; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Matrix, class Field> | ||||||
|  | class NonHermitianSchurDiagMooeeOperator :  public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  public: | ||||||
|  |   Matrix& _Mat; | ||||||
|  |  NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){}; | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |     tmp.Checkerboard() = !in.Checkerboard(); | ||||||
|  |      | ||||||
|  |     _Mat.Meooe(in, tmp); | ||||||
|  |     _Mat.MooeeInv(tmp, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |      | ||||||
|  |     _Mat.Mooee(in, out); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, out); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MeooeDag(in, tmp); | ||||||
|  |     _Mat.MooeeInvDag(tmp, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  | 	   | ||||||
|  |     _Mat.MooeeDag(in, out); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, out); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |      | ||||||
|  | template<class Matrix,class Field> | ||||||
|  | class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  protected: | ||||||
|  |   Matrix &_Mat; | ||||||
|  |    | ||||||
|  |  public: | ||||||
|  |   NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){}; | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  | 	   | ||||||
|  |     _Mat.Meooe(in, out); | ||||||
|  |     _Mat.MooeeInv(out, tmp); | ||||||
|  |     _Mat.Meooe(tmp, out); | ||||||
|  |     _Mat.MooeeInv(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MooeeInvDag(in, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  |     _Mat.MooeeInvDag(tmp, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Matrix, class Field> | ||||||
|  | class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  protected: | ||||||
|  |   Matrix& _Mat; | ||||||
|  |    | ||||||
|  |  public: | ||||||
|  |  NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){}; | ||||||
|  |  | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MooeeInv(in, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |     _Mat.MooeeInv(tmp, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MeooeDag(in, out); | ||||||
|  |     _Mat.MooeeInvDag(out, tmp); | ||||||
|  |     _Mat.MeooeDag(tmp, out); | ||||||
|  |     _Mat.MooeeInvDag(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | ||||||
|  | // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | ||||||
|  | template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | //  Staggered use | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<class Matrix,class Field> | ||||||
|  | class SchurStaggeredOperator :  public SchurOperatorBase<Field> { | ||||||
|  |  protected: | ||||||
|  |   Matrix &_Mat; | ||||||
|  |   Field tmp; | ||||||
|  |   RealD mass; | ||||||
|  |  public: | ||||||
|  |   SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  | ||||||
|  |   {  | ||||||
|  |     assert( _Mat.isTrivialEE() ); | ||||||
|  |     mass = _Mat.Mass(); | ||||||
|  |   } | ||||||
|  |   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|  |     Mpc(in,out); | ||||||
|  |     ComplexD dot= innerProduct(in,out); | ||||||
|  |     n1 = real(dot); | ||||||
|  |     n2 =0.0; | ||||||
|  |   } | ||||||
|  |   virtual void HermOp(const Field &in, Field &out){ | ||||||
|  |     Mpc(in,out); | ||||||
|  |     //    _Mat.Meooe(in,out); | ||||||
|  |     //    _Mat.Meooe(out,tmp); | ||||||
|  |     //    axpby(out,-1.0,mass*mass,tmp,in); | ||||||
|  |   } | ||||||
|  |   virtual  void Mpc      (const Field &in, Field &out)  | ||||||
|  |   { | ||||||
|     Field tmp(in.Grid()); |     Field tmp(in.Grid()); | ||||||
|     Field tmp2(in.Grid()); |     Field tmp2(in.Grid()); | ||||||
| 	 | 	 | ||||||
|     //    std::cout << GridLogIterative << " HermOp.Mpc "<<std::endl; |     //    _Mat.Mooee(in,out); | ||||||
|     _Mat.Mooee(in,out); |     //    _Mat.Mooee(out,tmp); | ||||||
|     _Mat.Mooee(out,tmp); |  | ||||||
|     //    std::cout << GridLogIterative << " HermOp.MooeeMooee "<<std::endl; |  | ||||||
|  |  | ||||||
|     tMeo-=usecond(); |  | ||||||
|     _Mat.Meooe(in,out); |     _Mat.Meooe(in,out); | ||||||
|     _Mat.Meooe(out,tmp); |     _Mat.Meooe(out,tmp); | ||||||
|     tMeo+=usecond(); |     axpby(out,-1.0,mass*mass,tmp,in); | ||||||
|     taxpby_norm-=usecond(); |  | ||||||
|     RealD nn=axpby_norm(out,-1.0,mass*mass,tmp,in); |  | ||||||
|     taxpby_norm+=usecond(); |  | ||||||
|     return nn; |  | ||||||
|   } |   } | ||||||
|   virtual  RealD MpcDag   (const Field &in, Field &out){ |   virtual  void MpcDag   (const Field &in, Field &out){ | ||||||
|     return Mpc(in,out); |     Mpc(in,out); | ||||||
|   } |   } | ||||||
|   virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { |   virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { | ||||||
|     assert(0);// Never need with staggered |     assert(0);// Never need with staggered | ||||||
| @@ -421,7 +513,6 @@ public: | |||||||
| }; | }; | ||||||
| template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | ||||||
|  |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for functions of operators | // Base classes for functions of operators | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| @@ -439,6 +530,16 @@ public: | |||||||
| template<class Field> class LinearFunction { | template<class Field> class LinearFunction { | ||||||
| public: | public: | ||||||
|   virtual void operator() (const Field &in, Field &out) = 0; |   virtual void operator() (const Field &in, Field &out) = 0; | ||||||
|  |  | ||||||
|  |   virtual void operator() (const std::vector<Field> &in, std::vector<Field> &out) | ||||||
|  |   { | ||||||
|  |     assert(in.size() == out.size()); | ||||||
|  |  | ||||||
|  |     for (unsigned int i = 0; i < in.size(); ++i) | ||||||
|  |     { | ||||||
|  |       (*this)(in[i], out[i]); | ||||||
|  |     } | ||||||
|  |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class Field> class IdentityLinearFunction : public LinearFunction<Field> { | template<class Field> class IdentityLinearFunction : public LinearFunction<Field> { | ||||||
|   | |||||||
| @@ -38,16 +38,12 @@ template<class Field> class SparseMatrixBase { | |||||||
| public: | public: | ||||||
|   virtual GridBase *Grid(void) =0; |   virtual GridBase *Grid(void) =0; | ||||||
|   // Full checkerboar operations |   // Full checkerboar operations | ||||||
|   virtual RealD M    (const Field &in, Field &out)=0; |   virtual void  M    (const Field &in, Field &out)=0; | ||||||
|   virtual RealD Mdag (const Field &in, Field &out)=0; |   virtual void  Mdag (const Field &in, Field &out)=0; | ||||||
|   virtual void  MdagM(const Field &in, Field &out,RealD &ni,RealD &no) { |  | ||||||
|     Field tmp (in.Grid()); |  | ||||||
|     ni=M(in,tmp); |  | ||||||
|     no=Mdag(tmp,out); |  | ||||||
|   } |  | ||||||
|   virtual void  MdagM(const Field &in, Field &out) { |   virtual void  MdagM(const Field &in, Field &out) { | ||||||
|     RealD ni, no; |     Field tmp (in.Grid()); | ||||||
|     MdagM(in,out,ni,no); |     M(in,tmp); | ||||||
|  |     Mdag(tmp,out); | ||||||
|   } |   } | ||||||
|   virtual  void Mdiag    (const Field &in, Field &out)=0; |   virtual  void Mdiag    (const Field &in, Field &out)=0; | ||||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; |   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; | ||||||
|   | |||||||
| @@ -234,10 +234,8 @@ public: | |||||||
|  |  | ||||||
|     GridBase *grid=in.Grid(); |     GridBase *grid=in.Grid(); | ||||||
|  |  | ||||||
|     // std::cout << "Chevyshef(): in.Grid()="<<in.Grid()<<std::endl; |  | ||||||
|     //std::cout <<" Linop.Grid()="<<Linop.Grid()<<"Linop.RedBlackGrid()="<<Linop.RedBlackGrid()<<std::endl; |  | ||||||
|  |  | ||||||
|     int vol=grid->gSites(); |     int vol=grid->gSites(); | ||||||
|  |     typedef typename Field::vector_type vector_type; | ||||||
|  |  | ||||||
|     Field T0(grid); T0 = in;   |     Field T0(grid); T0 = in;   | ||||||
|     Field T1(grid);  |     Field T1(grid);  | ||||||
| @@ -260,12 +258,26 @@ public: | |||||||
|     for(int n=2;n<order;n++){ |     for(int n=2;n<order;n++){ | ||||||
|  |  | ||||||
|       Linop.HermOp(*Tn,y); |       Linop.HermOp(*Tn,y); | ||||||
|       //     y=xscale*y+mscale*(*Tn); | #if 0 | ||||||
|       //      *Tnp=2.0*y-(*Tnm); |       auto y_v = y.View(); | ||||||
|       //      out=out+Coeffs[n]* (*Tnp); |       auto Tn_v = Tn->View(); | ||||||
|  |       auto Tnp_v = Tnp->View(); | ||||||
|  |       auto Tnm_v = Tnm->View(); | ||||||
|  |       constexpr int Nsimd = vector_type::Nsimd(); | ||||||
|  |       accelerator_forNB(ss, in.Grid()->oSites(), Nsimd, { | ||||||
|  | 	  coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss)); | ||||||
|  | 	  coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss)); | ||||||
|  |       }); | ||||||
|  |       if ( Coeffs[n] != 0.0) { | ||||||
|  | 	axpy(out,Coeffs[n],*Tnp,out); | ||||||
|  |       } | ||||||
|  | #else | ||||||
|       axpby(y,xscale,mscale,y,(*Tn)); |       axpby(y,xscale,mscale,y,(*Tn)); | ||||||
|       axpby(*Tnp,2.0,-1.0,y,(*Tnm)); |       axpby(*Tnp,2.0,-1.0,y,(*Tnm)); | ||||||
|       axpy(out,Coeffs[n],*Tnp,out); |       if ( Coeffs[n] != 0.0) { | ||||||
|  | 	axpy(out,Coeffs[n],*Tnp,out); | ||||||
|  |       } | ||||||
|  | #endif | ||||||
|       // Cycle pointers to avoid copies |       // Cycle pointers to avoid copies | ||||||
|       Field *swizzle = Tnm; |       Field *swizzle = Tnm; | ||||||
|       Tnm    =Tn; |       Tnm    =Tn; | ||||||
|   | |||||||
							
								
								
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,473 @@ | |||||||
|  | #include<math.h> | ||||||
|  | #include<stdio.h> | ||||||
|  | #include<stdlib.h> | ||||||
|  | #include<string> | ||||||
|  | #include<iostream> | ||||||
|  | #include<iomanip> | ||||||
|  | #include<cassert> | ||||||
|  |  | ||||||
|  | #include<Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Constructor | ||||||
|  | AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision, | ||||||
|  | 				 bigfloat (*f)(bigfloat x, void *data), void *data): f(f),  | ||||||
|  | 										     data(data),  | ||||||
|  | 										     prec(precision), | ||||||
|  | 										     apstrt(lower), apend(upper), apwidt(upper - lower), | ||||||
|  | 										     n(0), d(0), pow_n(0), pow_d(0) | ||||||
|  | { | ||||||
|  |   bigfloat::setDefaultPrecision(prec); | ||||||
|  |  | ||||||
|  |   std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n"; | ||||||
|  |   std::cout<<"Precision of arithmetic is "<<precision<<std::endl; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Determine the properties of the numerator and denominator polynomials | ||||||
|  | void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){ | ||||||
|  |   pow_n = num_degree; | ||||||
|  |   pow_d = den_degree; | ||||||
|  |  | ||||||
|  |   if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0); | ||||||
|  |   if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0); | ||||||
|  |  | ||||||
|  |   if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0); | ||||||
|  |   if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0); | ||||||
|  |  | ||||||
|  |   num_type = num_type_in; | ||||||
|  |   den_type = den_type_in; | ||||||
|  |  | ||||||
|  |   num_pows.resize(pow_n+1); | ||||||
|  |   den_pows.resize(pow_d+1); | ||||||
|  |  | ||||||
|  |   int n_in = 0; | ||||||
|  |   bool odd = num_type == PolyType::Full || num_type == PolyType::Odd; | ||||||
|  |   bool even = num_type == PolyType::Full || num_type == PolyType::Even; | ||||||
|  |   for(int i=0;i<=pow_n;i++){ | ||||||
|  |     num_pows[i] = -1; | ||||||
|  |     if(i % 2 == 0 && even) num_pows[i] = n_in++; | ||||||
|  |     if(i % 2 == 1 && odd) num_pows[i] = n_in++; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   std::cout << n_in << " terms in numerator" << std::endl; | ||||||
|  |   --n_in; //power is 1 less than the number of terms, eg  pow=1   a x^1  + b x^0 | ||||||
|  |  | ||||||
|  |   int d_in = 0; | ||||||
|  |   odd = den_type == PolyType::Full || den_type == PolyType::Odd; | ||||||
|  |   even = den_type == PolyType::Full || den_type == PolyType::Even; | ||||||
|  |   for(int i=0;i<=pow_d;i++){ | ||||||
|  |     den_pows[i] = -1; | ||||||
|  |     if(i % 2 == 0 && even) den_pows[i] = d_in++; | ||||||
|  |     if(i % 2 == 1 && odd) den_pows[i] = d_in++; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   std::cout << d_in << " terms in denominator" << std::endl; | ||||||
|  |   --d_in; | ||||||
|  |  | ||||||
|  |   n = n_in; | ||||||
|  |   d = d_in; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Setup algorithm | ||||||
|  | void AlgRemezGeneral::reinitializeAlgorithm(){ | ||||||
|  |   spread = 1.0e37; | ||||||
|  |   iter = 0; | ||||||
|  |  | ||||||
|  |   neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1 | ||||||
|  |  | ||||||
|  |   param.resize(neq); | ||||||
|  |   yy.resize(neq+1); | ||||||
|  |  | ||||||
|  |   //Initialize linear equation temporaries | ||||||
|  |   A.resize(neq*neq); | ||||||
|  |   B.resize(neq); | ||||||
|  |   IPS.resize(neq); | ||||||
|  |  | ||||||
|  |   //Initialize maximum and minimum errors | ||||||
|  |   xx.resize(neq+2); | ||||||
|  |   mm.resize(neq+1); | ||||||
|  |   initialGuess(); | ||||||
|  |  | ||||||
|  |   //Initialize search steps | ||||||
|  |   step.resize(neq+1); | ||||||
|  |   stpini(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree,  | ||||||
|  | 				       const PolyType num_type_in, const PolyType den_type_in,  | ||||||
|  | 				       const double _tolerance, const int report_freq){ | ||||||
|  |   //Setup the properties of the polynomial | ||||||
|  |   setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in); | ||||||
|  |  | ||||||
|  |   //Setup the algorithm | ||||||
|  |   reinitializeAlgorithm(); | ||||||
|  |  | ||||||
|  |   bigfloat tolerance = _tolerance; | ||||||
|  |  | ||||||
|  |   //Iterate until convergance | ||||||
|  |   while (spread > tolerance) {  | ||||||
|  |     if (iter++ % report_freq==0) | ||||||
|  |       std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl;  | ||||||
|  |  | ||||||
|  |     equations(); | ||||||
|  |     if (delta < tolerance) { | ||||||
|  |       std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n"; | ||||||
|  |       assert(0); | ||||||
|  |     };     | ||||||
|  |     assert( delta>= tolerance ); | ||||||
|  |  | ||||||
|  |     search(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int sign; | ||||||
|  |   double error = (double)getErr(mm[0],&sign); | ||||||
|  |   std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl; | ||||||
|  |  | ||||||
|  |   // Return the maximum error in the approximation | ||||||
|  |   return error; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Initial values of maximal and minimal errors | ||||||
|  | void AlgRemezGeneral::initialGuess(){ | ||||||
|  |   // Supply initial guesses for solution points | ||||||
|  |   long ncheb = neq;			// Degree of Chebyshev error estimate | ||||||
|  |  | ||||||
|  |   // Find ncheb+1 extrema of Chebyshev polynomial | ||||||
|  |   bigfloat a = ncheb; | ||||||
|  |   bigfloat r; | ||||||
|  |  | ||||||
|  |   mm[0] = apstrt; | ||||||
|  |   for (long i = 1; i < ncheb; i++) { | ||||||
|  |     r = 0.5 * (1 - cos((M_PI * i)/(double) a)); | ||||||
|  |     //r *= sqrt_bf(r); | ||||||
|  |     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||||
|  |     mm[i] = apstrt + r * apwidt; | ||||||
|  |   } | ||||||
|  |   mm[ncheb] = apend; | ||||||
|  |  | ||||||
|  |   a = 2.0 * ncheb; | ||||||
|  |   for (long i = 0; i <= ncheb; i++) { | ||||||
|  |     r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a)); | ||||||
|  |     //r *= sqrt_bf(r); // Squeeze to low end of interval | ||||||
|  |     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||||
|  |     xx[i] = apstrt + r * apwidt; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Initialise step sizes | ||||||
|  | void AlgRemezGeneral::stpini(){ | ||||||
|  |   xx[neq+1] = apend; | ||||||
|  |   delta = 0.25; | ||||||
|  |   step[0] = xx[0] - apstrt; | ||||||
|  |   for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1]; | ||||||
|  |   step[neq] = step[neq-1]; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Search for error maxima and minima | ||||||
|  | void AlgRemezGeneral::search(){ | ||||||
|  |   bigfloat a, q, xm, ym, xn, yn, xx1; | ||||||
|  |   int emsign, ensign, steps; | ||||||
|  |  | ||||||
|  |   int meq = neq + 1; | ||||||
|  |  | ||||||
|  |   bigfloat eclose = 1.0e30; | ||||||
|  |   bigfloat farther = 0l; | ||||||
|  |  | ||||||
|  |   bigfloat xx0 = apstrt; | ||||||
|  |  | ||||||
|  |   for (int i = 0; i < meq; i++) { | ||||||
|  |     steps = 0; | ||||||
|  |     xx1 = xx[i]; // Next zero | ||||||
|  |     if (i == meq-1) xx1 = apend; | ||||||
|  |     xm = mm[i]; | ||||||
|  |     ym = getErr(xm,&emsign); | ||||||
|  |     q = step[i]; | ||||||
|  |     xn = xm + q; | ||||||
|  |     if (xn < xx0 || xn >= xx1) {	// Cannot skip over adjacent boundaries | ||||||
|  |       q = -q; | ||||||
|  |       xn = xm; | ||||||
|  |       yn = ym; | ||||||
|  |       ensign = emsign; | ||||||
|  |     } else { | ||||||
|  |       yn = getErr(xn,&ensign); | ||||||
|  |       if (yn < ym) { | ||||||
|  | 	q = -q; | ||||||
|  | 	xn = xm; | ||||||
|  | 	yn = ym; | ||||||
|  | 	ensign = emsign; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |    | ||||||
|  |     while(yn >= ym) {		// March until error becomes smaller. | ||||||
|  |       if (++steps > 10) | ||||||
|  |       	break; | ||||||
|  |        | ||||||
|  |       ym = yn; | ||||||
|  |       xm = xn; | ||||||
|  |       emsign = ensign; | ||||||
|  |       a = xm + q; | ||||||
|  |       if (a == xm || a <= xx0 || a >= xx1) | ||||||
|  | 	break;// Must not skip over the zeros either side.       | ||||||
|  |  | ||||||
|  |       xn = a; | ||||||
|  |       yn = getErr(xn,&ensign); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     mm[i] = xm;			// Position of maximum | ||||||
|  |     yy[i] = ym;			// Value of maximum | ||||||
|  |  | ||||||
|  |     if (eclose > ym) eclose = ym; | ||||||
|  |     if (farther < ym) farther = ym; | ||||||
|  |  | ||||||
|  |     xx0 = xx1; // Walk to next zero. | ||||||
|  |   } // end of search loop | ||||||
|  |  | ||||||
|  |   q = (farther - eclose);	// Decrease step size if error spread increased | ||||||
|  |  | ||||||
|  |   if (eclose != 0.0) q /= eclose; // Relative error spread | ||||||
|  |  | ||||||
|  |   if (q >= spread) | ||||||
|  |     delta *= 0.5; // Spread is increasing; decrease step size | ||||||
|  |    | ||||||
|  |   spread = q; | ||||||
|  |  | ||||||
|  |   for (int i = 0; i < neq; i++) { | ||||||
|  |     q = yy[i+1]; | ||||||
|  |     if (q != 0.0) q = yy[i] / q  - (bigfloat)1l; | ||||||
|  |     else q = 0.0625; | ||||||
|  |     if (q > (bigfloat)0.25) q = 0.25; | ||||||
|  |     q *= mm[i+1] - mm[i]; | ||||||
|  |     step[i] = q * delta; | ||||||
|  |   } | ||||||
|  |   step[neq] = step[neq-1]; | ||||||
|  |    | ||||||
|  |   for (int i = 0; i < neq; i++) {	// Insert new locations for the zeros. | ||||||
|  |     xm = xx[i] - step[i]; | ||||||
|  |  | ||||||
|  |     if (xm <= apstrt) | ||||||
|  |       continue; | ||||||
|  |  | ||||||
|  |     if (xm >= apend) | ||||||
|  |       continue; | ||||||
|  |  | ||||||
|  |     if (xm <= mm[i]) | ||||||
|  |       xm = (bigfloat)0.5 * (mm[i] + xx[i]);     | ||||||
|  |  | ||||||
|  |     if (xm >= mm[i+1]) | ||||||
|  |       xm = (bigfloat)0.5 * (mm[i+1] + xx[i]); | ||||||
|  |      | ||||||
|  |     xx[i] = xm; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Solve the equations | ||||||
|  | void AlgRemezGeneral::equations(){ | ||||||
|  |   bigfloat x, y, z; | ||||||
|  |   bigfloat *aa; | ||||||
|  |    | ||||||
|  |   for (int i = 0; i < neq; i++) {	// set up the equations for solution by simq() | ||||||
|  |     int ip = neq * i;		// offset to 1st element of this row of matrix | ||||||
|  |     x = xx[i];			// the guess for this row | ||||||
|  |     y = func(x);		// right-hand-side vector | ||||||
|  |  | ||||||
|  |     z = (bigfloat)1l; | ||||||
|  |     aa = A.data()+ip; | ||||||
|  |     int t = 0; | ||||||
|  |     for (int j = 0; j <= pow_n; j++) { | ||||||
|  |       if(num_pows[j] != -1){ *aa++ = z; t++; } | ||||||
|  |       z *= x; | ||||||
|  |     } | ||||||
|  |     assert(t == n+1); | ||||||
|  |  | ||||||
|  |     z = (bigfloat)1l; | ||||||
|  |     t = 0; | ||||||
|  |     for (int j = 0; j < pow_d; j++) { | ||||||
|  |       if(den_pows[j] != -1){ *aa++ = -y * z; t++; } | ||||||
|  |       z *= x; | ||||||
|  |     } | ||||||
|  |     assert(t == d); | ||||||
|  |  | ||||||
|  |     B[i] = y * z;		// Right hand side vector | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Solve the simultaneous linear equations. | ||||||
|  |   if (simq()){ | ||||||
|  |     std::cout<<"simq failed\n"; | ||||||
|  |     exit(0); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Evaluate the rational form P(x)/Q(x) using coefficients | ||||||
|  | // from the solution vector param | ||||||
|  | bigfloat AlgRemezGeneral::approx(const bigfloat x) const{ | ||||||
|  |   // Work backwards toward the constant term. | ||||||
|  |   int c = n; | ||||||
|  |   bigfloat yn = param[c--];		// Highest order numerator coefficient | ||||||
|  |   for (int i = pow_n-1; i >= 0; i--) yn = x * yn  +  (num_pows[i] != -1 ? param[c--] : bigfloat(0l));   | ||||||
|  |  | ||||||
|  |   c = n+d; | ||||||
|  |   bigfloat yd = 1l; //Highest degree coefficient is 1.0 | ||||||
|  |   for (int i = pow_d-1; i >= 0; i--) yd = x * yd  +  (den_pows[i] != -1 ? param[c--] : bigfloat(0l));  | ||||||
|  |  | ||||||
|  |   return(yn/yd); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Compute size and sign of the approximation error at x | ||||||
|  | bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{ | ||||||
|  |   bigfloat f = func(x); | ||||||
|  |   bigfloat e = approx(x) - f; | ||||||
|  |   if (f != 0) e /= f; | ||||||
|  |   if (e < (bigfloat)0.0) { | ||||||
|  |     *sign = -1; | ||||||
|  |     e = -e; | ||||||
|  |   } | ||||||
|  |   else *sign = 1; | ||||||
|  |    | ||||||
|  |   return(e); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Solve the system AX=B | ||||||
|  | int AlgRemezGeneral::simq(){ | ||||||
|  |  | ||||||
|  |   int ip, ipj, ipk, ipn; | ||||||
|  |   int idxpiv; | ||||||
|  |   int kp, kp1, kpk, kpn; | ||||||
|  |   int nip, nkp; | ||||||
|  |   bigfloat em, q, rownrm, big, size, pivot, sum; | ||||||
|  |   bigfloat *aa; | ||||||
|  |   bigfloat *X = param.data(); | ||||||
|  |  | ||||||
|  |   int n = neq; | ||||||
|  |   int nm1 = n - 1; | ||||||
|  |   // Initialize IPS and X | ||||||
|  |    | ||||||
|  |   int ij = 0; | ||||||
|  |   for (int i = 0; i < n; i++) { | ||||||
|  |     IPS[i] = i; | ||||||
|  |     rownrm = 0.0; | ||||||
|  |     for(int j = 0; j < n; j++) { | ||||||
|  |       q = abs_bf(A[ij]); | ||||||
|  |       if(rownrm < q) rownrm = q; | ||||||
|  |       ++ij; | ||||||
|  |     } | ||||||
|  |     if (rownrm == (bigfloat)0l) { | ||||||
|  |       std::cout<<"simq rownrm=0\n"; | ||||||
|  |       return(1); | ||||||
|  |     } | ||||||
|  |     X[i] = (bigfloat)1.0 / rownrm; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   for (int k = 0; k < nm1; k++) { | ||||||
|  |     big = 0.0; | ||||||
|  |     idxpiv = 0; | ||||||
|  |      | ||||||
|  |     for (int i = k; i < n; i++) { | ||||||
|  |       ip = IPS[i]; | ||||||
|  |       ipk = n*ip + k; | ||||||
|  |       size = abs_bf(A[ipk]) * X[ip]; | ||||||
|  |       if (size > big) { | ||||||
|  | 	big = size; | ||||||
|  | 	idxpiv = i; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |      | ||||||
|  |     if (big == (bigfloat)0l) { | ||||||
|  |       std::cout<<"simq big=0\n"; | ||||||
|  |       return(2); | ||||||
|  |     } | ||||||
|  |     if (idxpiv != k) { | ||||||
|  |       int j = IPS[k]; | ||||||
|  |       IPS[k] = IPS[idxpiv]; | ||||||
|  |       IPS[idxpiv] = j; | ||||||
|  |     } | ||||||
|  |     kp = IPS[k]; | ||||||
|  |     kpk = n*kp + k; | ||||||
|  |     pivot = A[kpk]; | ||||||
|  |     kp1 = k+1; | ||||||
|  |     for (int i = kp1; i < n; i++) { | ||||||
|  |       ip = IPS[i]; | ||||||
|  |       ipk = n*ip + k; | ||||||
|  |       em = -A[ipk] / pivot; | ||||||
|  |       A[ipk] = -em; | ||||||
|  |       nip = n*ip; | ||||||
|  |       nkp = n*kp; | ||||||
|  |       aa = A.data()+nkp+kp1; | ||||||
|  |       for (int j = kp1; j < n; j++) { | ||||||
|  | 	ipj = nip + j; | ||||||
|  | 	A[ipj] = A[ipj] + em * *aa++; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   kpn = n * IPS[n-1] + n - 1;	// last element of IPS[n] th row | ||||||
|  |   if (A[kpn] == (bigfloat)0l) { | ||||||
|  |     std::cout<<"simq A[kpn]=0\n"; | ||||||
|  |     return(3); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |    | ||||||
|  |   ip = IPS[0]; | ||||||
|  |   X[0] = B[ip]; | ||||||
|  |   for (int i = 1; i < n; i++) { | ||||||
|  |     ip = IPS[i]; | ||||||
|  |     ipj = n * ip; | ||||||
|  |     sum = 0.0; | ||||||
|  |     for (int j = 0; j < i; j++) { | ||||||
|  |       sum += A[ipj] * X[j]; | ||||||
|  |       ++ipj; | ||||||
|  |     } | ||||||
|  |     X[i] = B[ip] - sum; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   ipn = n * IPS[n-1] + n - 1; | ||||||
|  |   X[n-1] = X[n-1] / A[ipn]; | ||||||
|  |    | ||||||
|  |   for (int iback = 1; iback < n; iback++) { | ||||||
|  |     //i goes (n-1),...,1 | ||||||
|  |     int i = nm1 - iback; | ||||||
|  |     ip = IPS[i]; | ||||||
|  |     nip = n*ip; | ||||||
|  |     sum = 0.0; | ||||||
|  |     aa = A.data()+nip+i+1; | ||||||
|  |     for (int j= i + 1; j < n; j++)  | ||||||
|  |       sum += *aa++ * X[j]; | ||||||
|  |     X[i] = (X[i] - sum) / A[nip+i]; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   return(0); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void AlgRemezGeneral::csv(std::ostream & os) const{ | ||||||
|  |   os << "Numerator" << std::endl; | ||||||
|  |   for(int i=0;i<=pow_n;i++){ | ||||||
|  |     os << getCoeffNum(i) << "*x^" << i; | ||||||
|  |     if(i!=pow_n) os << " + "; | ||||||
|  |   } | ||||||
|  |   os << std::endl; | ||||||
|  |  | ||||||
|  |   os << "Denominator" << std::endl; | ||||||
|  |   for(int i=0;i<=pow_d;i++){ | ||||||
|  |     os << getCoeffDen(i) << "*x^" << i; | ||||||
|  |     if(i!=pow_d) os << " + "; | ||||||
|  |   } | ||||||
|  |   os << std::endl; | ||||||
|  |  | ||||||
|  |   //For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc | ||||||
|  |   int sign; | ||||||
|  |   os << "Errors at maxima: coordinate, error, (sign)" << std::endl; | ||||||
|  |   for(int i=0;i<neq+1;i++){  | ||||||
|  |     os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   os << "Scan over range:" << std::endl; | ||||||
|  |   int npt = 60; | ||||||
|  |   bigfloat dlt = (apend - apstrt)/bigfloat(npt-1); | ||||||
|  |  | ||||||
|  |   for (bigfloat x=apstrt; x<=apend; x = x + dlt) { | ||||||
|  |     double f = evaluateFunc(x); | ||||||
|  |     double r = evaluateApprox(x); | ||||||
|  |     os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl; | ||||||
|  |   } | ||||||
|  |   return; | ||||||
|  | } | ||||||
							
								
								
									
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							| @@ -0,0 +1,170 @@ | |||||||
|  | /* | ||||||
|  |   C.Kelly Jan 2020 based on implementation by M. Clark May 2005 | ||||||
|  |  | ||||||
|  |   AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial  | ||||||
|  |   It includes optional restriction to odd/even polynomials for the numerator and/or denominator | ||||||
|  | */ | ||||||
|  |  | ||||||
|  | #ifndef INCLUDED_ALG_REMEZ_GENERAL_H | ||||||
|  | #define INCLUDED_ALG_REMEZ_GENERAL_H | ||||||
|  |  | ||||||
|  | #include <stddef.h> | ||||||
|  | #include <Grid/GridStd.h> | ||||||
|  |  | ||||||
|  | #ifdef HAVE_LIBGMP | ||||||
|  | #include "bigfloat.h" | ||||||
|  | #else | ||||||
|  | #include "bigfloat_double.h" | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|  | class AlgRemezGeneral{ | ||||||
|  |  public: | ||||||
|  |   enum PolyType { Even, Odd, Full }; | ||||||
|  |  | ||||||
|  |  private: | ||||||
|  |  | ||||||
|  |   // In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer | ||||||
|  |   bigfloat (*f)(bigfloat x, void *data); | ||||||
|  |   void *data; | ||||||
|  |  | ||||||
|  |   // The approximation parameters | ||||||
|  |   std::vector<bigfloat> param; | ||||||
|  |   bigfloat norm; | ||||||
|  |  | ||||||
|  |   // The number of non-zero terms in the numerator and denominator | ||||||
|  |   int n, d; | ||||||
|  |   // The numerator and denominator degree (i.e.  the largest power) | ||||||
|  |   int pow_n, pow_d; | ||||||
|  |    | ||||||
|  |   // Specify if the numerator and/or denominator are odd/even polynomials | ||||||
|  |   PolyType num_type; | ||||||
|  |   PolyType den_type; | ||||||
|  |   std::vector<int> num_pows; //contains the mapping, with -1 if not present | ||||||
|  |   std::vector<int> den_pows; | ||||||
|  |  | ||||||
|  |   // The bounds of the approximation | ||||||
|  |   bigfloat apstrt, apwidt, apend; | ||||||
|  |  | ||||||
|  |   // Variables used to calculate the approximation | ||||||
|  |   int nd1, iter; | ||||||
|  |   std::vector<bigfloat> xx; | ||||||
|  |   std::vector<bigfloat> mm; | ||||||
|  |   std::vector<bigfloat> step; | ||||||
|  |  | ||||||
|  |   bigfloat delta, spread; | ||||||
|  |    | ||||||
|  |   // Variables used in search | ||||||
|  |   std::vector<bigfloat> yy; | ||||||
|  |  | ||||||
|  |   // Variables used in solving linear equations | ||||||
|  |   std::vector<bigfloat> A; | ||||||
|  |   std::vector<bigfloat> B; | ||||||
|  |   std::vector<int> IPS; | ||||||
|  |  | ||||||
|  |   // The number of equations we must solve at each iteration (n+d+1) | ||||||
|  |   int neq; | ||||||
|  |  | ||||||
|  |   // The precision of the GNU MP library | ||||||
|  |   long prec; | ||||||
|  |  | ||||||
|  |   // Initialize member variables associated with the polynomial's properties | ||||||
|  |   void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in); | ||||||
|  |  | ||||||
|  |   // Initial values of maximal and minmal errors | ||||||
|  |   void initialGuess(); | ||||||
|  |  | ||||||
|  |   // Initialise step sizes | ||||||
|  |   void stpini(); | ||||||
|  |  | ||||||
|  |   // Initialize the algorithm | ||||||
|  |   void reinitializeAlgorithm(); | ||||||
|  |  | ||||||
|  |   // Solve the equations | ||||||
|  |   void equations(); | ||||||
|  |  | ||||||
|  |   // Search for error maxima and minima | ||||||
|  |   void search();  | ||||||
|  |  | ||||||
|  |   // Calculate function required for the approximation | ||||||
|  |   inline bigfloat func(bigfloat x) const{ | ||||||
|  |     return f(x, data); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Compute size and sign of the approximation error at x | ||||||
|  |   bigfloat getErr(bigfloat x, int *sign) const; | ||||||
|  |  | ||||||
|  |   // Solve the system AX=B   where X = param | ||||||
|  |   int simq(); | ||||||
|  |  | ||||||
|  |   // Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param | ||||||
|  |   bigfloat approx(bigfloat x) const; | ||||||
|  |  | ||||||
|  |  public: | ||||||
|  |    | ||||||
|  |   AlgRemezGeneral(double lower, double upper, long prec, | ||||||
|  | 		  bigfloat (*f)(bigfloat x, void *data), void *data); | ||||||
|  |  | ||||||
|  |   inline int getDegree(void) const{  | ||||||
|  |     assert(n==d); | ||||||
|  |     return n; | ||||||
|  |   } | ||||||
|  |   // Reset the bounds of the approximation | ||||||
|  |   inline void setBounds(double lower, double upper) { | ||||||
|  |     apstrt = lower; | ||||||
|  |     apend = upper; | ||||||
|  |     apwidt = apend - apstrt; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Get the bounds of the approximation | ||||||
|  |   inline void getBounds(double &lower, double &upper) const{  | ||||||
|  |     lower=(double)apstrt; | ||||||
|  |     upper=(double)apend; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Run the algorithm to generate the rational approximation | ||||||
|  |   double generateApprox(int num_degree, int den_degree,  | ||||||
|  | 			PolyType num_type, PolyType den_type, | ||||||
|  | 			const double tolerance = 1e-15, const int report_freq = 1000); | ||||||
|  |    | ||||||
|  |   inline double generateApprox(int num_degree, int den_degree,  | ||||||
|  | 			       const double tolerance = 1e-15, const int report_freq = 1000){ | ||||||
|  |     return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   // Evaluate the rational form P(x)/Q(x) using coefficients from the | ||||||
|  |   // solution vector param | ||||||
|  |   inline double evaluateApprox(double x) const{ | ||||||
|  |     return (double)approx((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param | ||||||
|  |   inline double evaluateInverseApprox(double x) const{ | ||||||
|  |     return 1.0/(double)approx((bigfloat)x); | ||||||
|  |   }   | ||||||
|  |  | ||||||
|  |   // Calculate function required for the approximation | ||||||
|  |   inline double evaluateFunc(double x) const{ | ||||||
|  |     return (double)func((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Calculate inverse function required for the approximation | ||||||
|  |   inline double evaluateInverseFunc(double x) const{ | ||||||
|  |     return 1.0/(double)func((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Dump csv of function, approx and error | ||||||
|  |   void csv(std::ostream &os = std::cout) const; | ||||||
|  |  | ||||||
|  |   // Get the coefficient of the term x^i in the numerator | ||||||
|  |   inline double getCoeffNum(const int i) const{     | ||||||
|  |     return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]); | ||||||
|  |   } | ||||||
|  |   // Get the coefficient of the term x^i in the denominator | ||||||
|  |   inline double getCoeffDen(const int i) const{  | ||||||
|  |     if(i == pow_d) return 1.0; | ||||||
|  |     else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]);  | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
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								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
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							| @@ -0,0 +1,183 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/approx/ZMobius.cc | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #include <Grid/algorithms/approx/ZMobius.h> | ||||||
|  | #include <Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | NAMESPACE_BEGIN(Approx); | ||||||
|  |  | ||||||
|  | //Compute the tanh approximation | ||||||
|  | inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){ | ||||||
|  |   int Ls = w.size(); | ||||||
|  |  | ||||||
|  |   ComplexD fxp = 1., fmp = 1.; | ||||||
|  |   for(int i=0;i<Ls;i++){ | ||||||
|  |     fxp = fxp * ( w[i] + x ); | ||||||
|  |     fmp = fmp * ( w[i] - x ); | ||||||
|  |   } | ||||||
|  |   return ((fxp - fmp)/(fxp + fmp)).real(); | ||||||
|  | } | ||||||
|  | inline double epsilonMobius(const double x, const std::vector<RealD> &w){ | ||||||
|  |   int Ls = w.size(); | ||||||
|  |  | ||||||
|  |   double fxp = 1., fmp = 1.; | ||||||
|  |   for(int i=0;i<Ls;i++){ | ||||||
|  |     fxp = fxp * ( w[i] + x ); | ||||||
|  |     fmp = fmp * ( w[i] - x ); | ||||||
|  |   } | ||||||
|  |   return (fxp - fmp)/(fxp + fmp); | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
|  | //Compute the tanh approximation in a form suitable for the Remez | ||||||
|  | bigfloat epsilonMobius(bigfloat x, void* data){ | ||||||
|  |   const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data ); | ||||||
|  |   bigfloat fxp(1.0); | ||||||
|  |   bigfloat fmp(1.0); | ||||||
|  |  | ||||||
|  |   for(int i=0;i<omega.size();i++){ | ||||||
|  |     fxp = fxp * ( bigfloat(omega[i]) + x); | ||||||
|  |     fmp = fmp * ( bigfloat(omega[i]) - x); | ||||||
|  |   } | ||||||
|  |   return (fxp - fmp)/(fxp + fmp); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||||
|  | //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||||
|  | 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound){ | ||||||
|  |   assert(omega_in.size() == Ls_in); | ||||||
|  |   omega_out.resize(Ls_out); | ||||||
|  |  | ||||||
|  |   //Use the Remez algorithm to generate the appropriate rational polynomial | ||||||
|  |   //For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)   | ||||||
|  |   AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in);  | ||||||
|  |   remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100); | ||||||
|  |   remez.csv(std::cout); | ||||||
|  |  | ||||||
|  |   //The rational approximation has the form  [ f(x) - f(-x) ] / [ f(x) + f(-x) ]  where  f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x ) | ||||||
|  |   //cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7  pg 102 | ||||||
|  |   //omega_i are therefore the negative of the complex roots of f(x) | ||||||
|  |  | ||||||
|  |   //We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial | ||||||
|  |   // \rho(\lambda) = det( A - \lambda I )    where I is the unit matrix | ||||||
|  |   //The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n   is the companion matrix  | ||||||
|  |   // A = | 0    1   0    0 0 .... 0 | | ||||||
|  |   //     | 0    0   1    0 0 .... 0 | | ||||||
|  |   //     | :    :   :    : :      : | | ||||||
|  |   //     | 0    0   0    0 0      1 | ||||||
|  |   //     | -a0 -a1 -a2  ...  ... -an| | ||||||
|  |  | ||||||
|  |  | ||||||
|  |   //Note the Remez defines the largest power to have unit coefficient | ||||||
|  |   std::vector<RealD> coeffs(Ls_out+1); | ||||||
|  |   for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers | ||||||
|  |   for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers | ||||||
|  |  | ||||||
|  |   std::vector<std::complex<RealD> > roots(Ls_out); | ||||||
|  |  | ||||||
|  |   //Form the companion matrix | ||||||
|  |   Eigen::MatrixXd compn(Ls_out,Ls_out); | ||||||
|  |   for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.; | ||||||
|  |   compn(Ls_out - 1, 0) = -coeffs[0]; | ||||||
|  |    | ||||||
|  |   for(int j=1;j<Ls_out;j++){ | ||||||
|  |     for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.; | ||||||
|  |     compn(Ls_out - 1, j) = -coeffs[j]; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   //Eigensolve | ||||||
|  |   Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false); | ||||||
|  |  | ||||||
|  |   const auto & ev = slv.eigenvalues(); | ||||||
|  |   for(int i=0;i<Ls_out;i++) | ||||||
|  |     omega_out[i] = -ev(i); | ||||||
|  |  | ||||||
|  |   //Sort ascending (smallest at start of vector!) | ||||||
|  |   std::sort(omega_out.begin(), omega_out.end(),  | ||||||
|  | 	    [&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); }); | ||||||
|  |  | ||||||
|  |   //McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension | ||||||
|  |   std::vector<ComplexD> omega_tmp = omega_out; | ||||||
|  |   int s_low=0, s_high=Ls_out-1, ss=0; | ||||||
|  |   for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega | ||||||
|  |     int s_to; | ||||||
|  |     if(ss % 2 == 0){ | ||||||
|  |       s_to = s_low++; | ||||||
|  |     }else{ | ||||||
|  |       s_to = s_high--; | ||||||
|  |     } | ||||||
|  |     omega_out[s_to] = omega_tmp[s_from]; | ||||||
|  |     ++ss; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   std::cout << "Resulting omega_i:" << std::endl;   | ||||||
|  |   for(int i=0;i<Ls_out;i++) | ||||||
|  |     std::cout << omega_out[i] << std::endl; | ||||||
|  |  | ||||||
|  |   std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl; | ||||||
|  |   std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n"; | ||||||
|  |    | ||||||
|  |   int npt = 60; | ||||||
|  |   double dlt = lambda_bound/double(npt-1); | ||||||
|  |  | ||||||
|  |   for (int i =0; i<npt; i++){ | ||||||
|  |     double x = i*dlt; | ||||||
|  |     double r = remez.evaluateApprox(x); | ||||||
|  |     double p = epsilonMobius(x, omega_out); | ||||||
|  |     double e = epsilonMobius(x, omega_in); | ||||||
|  |  | ||||||
|  |     std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  |    | ||||||
|  | //mobius_param = b+c   with b-c=1 | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||||
|  |   std::vector<RealD> omega_in(Ls_in, 1./mobius_param); | ||||||
|  |   computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||||
|  | 			 const RealD mobius_param_out, const int Ls_out,  | ||||||
|  | 			 const RealD mobius_param_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound){ | ||||||
|  |   computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound); | ||||||
|  |   for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out; | ||||||
|  | } | ||||||
|  | //Assumes mobius_param_out == mobius_param_in | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||||
|  |   computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
							
								
								
									
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							| @@ -0,0 +1,57 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/approx/ZMobius.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_ZMOBIUS_APPROX_H | ||||||
|  | #define GRID_ZMOBIUS_APPROX_H | ||||||
|  |  | ||||||
|  | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | NAMESPACE_BEGIN(Approx); | ||||||
|  |  | ||||||
|  | //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||||
|  | //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||||
|  | 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound); | ||||||
|  |    | ||||||
|  | //mobius_param = b+c   with b-c=1 | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||||
|  | 			 const RealD mobius_param_out, const int Ls_out,  | ||||||
|  | 			 const RealD mobius_param_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | //Assumes mobius_param_out == mobius_param_in | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef INCLUDED_BIGFLOAT_DOUBLE_H | ||||||
|  | #define INCLUDED_BIGFLOAT_DOUBLE_H | ||||||
|  |  | ||||||
| #include <math.h> | #include <math.h> | ||||||
|  |  | ||||||
| typedef double mfloat;  | typedef double mfloat;  | ||||||
| @@ -186,4 +190,6 @@ public: | |||||||
|   //  friend bigfloat& random(void); |   //  friend bigfloat& random(void); | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,234 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/BiCGSTAB.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: juettner <juettner@soton.ac.uk> | ||||||
|  | Author: David Murphy <djmurphy@mit.edu> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef GRID_BICGSTAB_H | ||||||
|  | #define GRID_BICGSTAB_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////// | ||||||
|  | // Base classes for iterative processes based on operators | ||||||
|  | // single input vec, single output vec. | ||||||
|  | ///////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  | template <class Field> | ||||||
|  | class BiCGSTAB : public OperatorFunction<Field>  | ||||||
|  | { | ||||||
|  |   public: | ||||||
|  |     using OperatorFunction<Field>::operator(); | ||||||
|  |      | ||||||
|  |     bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||||
|  |                              // Defaults true. | ||||||
|  |     RealD Tolerance; | ||||||
|  |     Integer MaxIterations; | ||||||
|  |     Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |    | ||||||
|  |     BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) :  | ||||||
|  |       Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){}; | ||||||
|  |  | ||||||
|  |     void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi)  | ||||||
|  |     { | ||||||
|  |       psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |       conformable(psi, src); | ||||||
|  |  | ||||||
|  |       RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1); | ||||||
|  |       RealD a(0), bo(0), b(0), ssq(0); | ||||||
|  |  | ||||||
|  |       Field p(src); | ||||||
|  |       Field r(src); | ||||||
|  |       Field rhat(src); | ||||||
|  |       Field v(src); | ||||||
|  |       Field s(src); | ||||||
|  |       Field t(src); | ||||||
|  |       Field h(src); | ||||||
|  |  | ||||||
|  |       v = Zero(); | ||||||
|  |       p = Zero(); | ||||||
|  |  | ||||||
|  |       // Initial residual computation & set up | ||||||
|  |       RealD guess = norm2(psi); | ||||||
|  |       assert(std::isnan(guess) == 0); | ||||||
|  |      | ||||||
|  |       Linop.Op(psi, v); | ||||||
|  |       b = norm2(v); | ||||||
|  |  | ||||||
|  |       r = src - v; | ||||||
|  |       rhat = r; | ||||||
|  |       a = norm2(r); | ||||||
|  |       ssq = norm2(src); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:   src " << ssq << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:    mp " << b << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:     r " << a << std::endl; | ||||||
|  |  | ||||||
|  |       RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |       // Check if guess is really REALLY good :) | ||||||
|  |       if(a <= rsq){ return; } | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       GridStopWatch LinalgTimer; | ||||||
|  |       GridStopWatch InnerTimer; | ||||||
|  |       GridStopWatch AxpyNormTimer; | ||||||
|  |       GridStopWatch LinearCombTimer; | ||||||
|  |       GridStopWatch MatrixTimer; | ||||||
|  |       GridStopWatch SolverTimer; | ||||||
|  |  | ||||||
|  |       SolverTimer.Start(); | ||||||
|  |       int k; | ||||||
|  |       for (k = 1; k <= MaxIterations; k++)  | ||||||
|  |       { | ||||||
|  |         rho_prev = rho; | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Crho  = innerProduct(rhat,r); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         rho = Crho.real(); | ||||||
|  |  | ||||||
|  |         beta = (rho / rho_prev) * (alpha / omega); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  |         bo = beta * omega; | ||||||
|  | 	{ | ||||||
|  | 	  autoView( p_v , p, AcceleratorWrite); | ||||||
|  | 	  autoView( r_v , r, AcceleratorRead); | ||||||
|  | 	  autoView( v_v , v, AcceleratorRead); | ||||||
|  | 	  accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	} | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         MatrixTimer.Start(); | ||||||
|  |         Linop.Op(p,v); | ||||||
|  |         MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Calpha = innerProduct(rhat,v); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         alpha = rho / Calpha.real(); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  | 	{ | ||||||
|  | 	  autoView( p_v , p, AcceleratorRead); | ||||||
|  | 	  autoView( r_v , r, AcceleratorRead); | ||||||
|  | 	  autoView( v_v , v, AcceleratorRead); | ||||||
|  | 	  autoView( psi_v,psi, AcceleratorRead); | ||||||
|  | 	  autoView( h_v  ,  h, AcceleratorWrite); | ||||||
|  | 	  autoView( s_v  ,  s, AcceleratorWrite); | ||||||
|  | 	  accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	  accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss)); | ||||||
|  |  	  }); | ||||||
|  |         } | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         MatrixTimer.Start(); | ||||||
|  |         Linop.Op(s,t); | ||||||
|  |         MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Comega = innerProduct(t,s); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         omega = Comega.real() / norm2(t); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  | 	{ | ||||||
|  | 	  autoView( psi_v,psi, AcceleratorWrite); | ||||||
|  | 	  autoView( r_v , r, AcceleratorWrite); | ||||||
|  | 	  autoView( h_v , h, AcceleratorRead); | ||||||
|  | 	  autoView( s_v , s, AcceleratorRead); | ||||||
|  | 	  autoView( t_v , t, AcceleratorRead); | ||||||
|  | 	  accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss)); | ||||||
|  | 	      coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	} | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  | 	 | ||||||
|  |         cp = norm2(r); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         // Stopping condition | ||||||
|  |         if(cp <= rsq)  | ||||||
|  |         { | ||||||
|  |           SolverTimer.Stop(); | ||||||
|  |           Linop.Op(psi, v); | ||||||
|  |           p = v - src; | ||||||
|  |  | ||||||
|  |           RealD srcnorm = sqrt(norm2(src)); | ||||||
|  |           RealD resnorm = sqrt(norm2(p)); | ||||||
|  |           RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |           std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |           std::cout << GridLogMessage << "Time breakdown " << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |           if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); } | ||||||
|  |  | ||||||
|  |           IterationsToComplete = k;	 | ||||||
|  |  | ||||||
|  |           return; | ||||||
|  |         } | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |       if(ErrorOnNoConverge){ assert(0); } | ||||||
|  |       IterationsToComplete = k; | ||||||
|  |     } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,158 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  | Author: David Murphy <djmurphy@mit.edu> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef GRID_BICGSTAB_MIXED_PREC_H | ||||||
|  | #define GRID_BICGSTAB_MIXED_PREC_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | // Mixed precision restarted defect correction BiCGSTAB | ||||||
|  | template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||||
|  | class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD>  | ||||||
|  | { | ||||||
|  |   public:                                                 | ||||||
|  |     RealD   Tolerance; | ||||||
|  |     RealD   InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||||
|  |     Integer MaxInnerIterations; | ||||||
|  |     Integer MaxOuterIterations; | ||||||
|  |     GridBase* SinglePrecGrid; // Grid for single-precision fields | ||||||
|  |     RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||||
|  |     LinearOperatorBase<FieldF> &Linop_f; | ||||||
|  |     LinearOperatorBase<FieldD> &Linop_d; | ||||||
|  |  | ||||||
|  |     Integer TotalInnerIterations; //Number of inner CG iterations | ||||||
|  |     Integer TotalOuterIterations; //Number of restarts | ||||||
|  |     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||||
|  |  | ||||||
|  |     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||||
|  |     LinearFunction<FieldF> *guesser; | ||||||
|  |      | ||||||
|  |     MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid,  | ||||||
|  |         LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) :  | ||||||
|  |       Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit),  | ||||||
|  |       MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {}; | ||||||
|  |  | ||||||
|  |     void useGuesser(LinearFunction<FieldF>& g){ | ||||||
|  |       guesser = &g; | ||||||
|  |     } | ||||||
|  |    | ||||||
|  |     void operator() (const FieldD& src_d_in, FieldD& sol_d) | ||||||
|  |     { | ||||||
|  |       TotalInnerIterations = 0; | ||||||
|  |      | ||||||
|  |       GridStopWatch TotalTimer; | ||||||
|  |       TotalTimer.Start(); | ||||||
|  |        | ||||||
|  |       int cb = src_d_in.Checkerboard(); | ||||||
|  |       sol_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       RealD src_norm = norm2(src_d_in); | ||||||
|  |       RealD stop = src_norm * Tolerance*Tolerance; | ||||||
|  |  | ||||||
|  |       GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||||
|  |       FieldD tmp_d(DoublePrecGrid); | ||||||
|  |       tmp_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldD tmp2_d(DoublePrecGrid); | ||||||
|  |       tmp2_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldD src_d(DoublePrecGrid); | ||||||
|  |       src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||||
|  |        | ||||||
|  |       RealD inner_tol = InnerTolerance; | ||||||
|  |        | ||||||
|  |       FieldF src_f(SinglePrecGrid); | ||||||
|  |       src_f.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldF sol_f(SinglePrecGrid); | ||||||
|  |       sol_f.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||||
|  |       CG_f.ErrorOnNoConverge = false; | ||||||
|  |  | ||||||
|  |       GridStopWatch InnerCGtimer; | ||||||
|  |  | ||||||
|  |       GridStopWatch PrecChangeTimer; | ||||||
|  |        | ||||||
|  |       Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||||
|  |          | ||||||
|  |       for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++) | ||||||
|  |       { | ||||||
|  |         // Compute double precision rsd and also new RHS vector. | ||||||
|  |         Linop_d.Op(sol_d, tmp_d); | ||||||
|  |         RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector | ||||||
|  |          | ||||||
|  |         std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl; | ||||||
|  |  | ||||||
|  |         if(norm < OuterLoopNormMult * stop){ | ||||||
|  |           std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl; | ||||||
|  |           break; | ||||||
|  |         } | ||||||
|  |         while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ?? | ||||||
|  |  | ||||||
|  |         PrecChangeTimer.Start(); | ||||||
|  |         precisionChange(src_f, src_d); | ||||||
|  |         PrecChangeTimer.Stop(); | ||||||
|  |          | ||||||
|  |         sol_f = Zero(); | ||||||
|  |  | ||||||
|  |         //Optionally improve inner solver guess (eg using known eigenvectors) | ||||||
|  |         if(guesser != NULL){ (*guesser)(src_f, sol_f); } | ||||||
|  |  | ||||||
|  |         //Inner CG | ||||||
|  |         CG_f.Tolerance = inner_tol; | ||||||
|  |         InnerCGtimer.Start(); | ||||||
|  |         CG_f(Linop_f, src_f, sol_f); | ||||||
|  |         InnerCGtimer.Stop(); | ||||||
|  |         TotalInnerIterations += CG_f.IterationsToComplete; | ||||||
|  |          | ||||||
|  |         //Convert sol back to double and add to double prec solution | ||||||
|  |         PrecChangeTimer.Start(); | ||||||
|  |         precisionChange(tmp_d, sol_f); | ||||||
|  |         PrecChangeTimer.Stop(); | ||||||
|  |          | ||||||
|  |         axpy(sol_d, 1.0, tmp_d, sol_d); | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       //Final trial CG | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl; | ||||||
|  |        | ||||||
|  |       BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||||
|  |       CG_d(Linop_d, src_d_in, sol_d); | ||||||
|  |       TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||||
|  |  | ||||||
|  |       TotalTimer.Stop(); | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -52,6 +52,7 @@ class BlockConjugateGradient : public OperatorFunction<Field> { | |||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|   Integer PrintInterval; //GridLogMessages or Iterative |   Integer PrintInterval; //GridLogMessages or Iterative | ||||||
|  |   RealD TrueResidual; | ||||||
|    |    | ||||||
|   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) |   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||||
|     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) |     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) | ||||||
| @@ -306,7 +307,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | |||||||
|  |  | ||||||
|       Linop.HermOp(X, AD); |       Linop.HermOp(X, AD); | ||||||
|       AD = AD-B; |       AD = AD-B; | ||||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl; |       TrueResidual = std::sqrt(norm2(AD)/norm2(B)); | ||||||
|  |       std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
| @@ -442,7 +444,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field & | |||||||
|  |  | ||||||
|       Linop.HermOp(Psi, AP); |       Linop.HermOp(Psi, AP); | ||||||
|       AP = AP-Src; |       AP = AP-Src; | ||||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl; |       TrueResidual = std::sqrt(norm2(AP)/norm2(Src)); | ||||||
|  |       std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
| @@ -653,7 +656,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|       if ( rr > max_resid ) max_resid = rr; |       if ( rr > max_resid ) max_resid = rr; | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< sqrt(rrsum/sssum) << " max "<< sqrt(max_resid) <<std::endl; |     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl; | ||||||
|  |  | ||||||
|     if ( max_resid < Tolerance*Tolerance ) {  |     if ( max_resid < Tolerance*Tolerance ) {  | ||||||
|  |  | ||||||
| @@ -668,7 +671,8 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|  |  | ||||||
|       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); |       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); | ||||||
|       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; |       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; | ||||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(normv(AD)/normv(B)) <<std::endl; |       TrueResidual = std::sqrt(normv(AD)/normv(B)); | ||||||
|  |       std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
|   | |||||||
| @@ -49,6 +49,7 @@ public: | |||||||
|   RealD Tolerance; |   RealD Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |   RealD TrueResidual; | ||||||
|    |    | ||||||
|   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) |   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||||
|     : Tolerance(tol), |     : Tolerance(tol), | ||||||
| @@ -81,6 +82,14 @@ public: | |||||||
|     cp = a; |     cp = a; | ||||||
|     ssq = norm2(src); |     ssq = norm2(src); | ||||||
|  |  | ||||||
|  |     // Handle trivial case of zero src | ||||||
|  |     if (ssq == 0.){ | ||||||
|  |       psi = Zero(); | ||||||
|  |       IterationsToComplete = 1; | ||||||
|  |       TrueResidual = 0.; | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; | ||||||
| @@ -92,6 +101,7 @@ public: | |||||||
|  |  | ||||||
|     // Check if guess is really REALLY good :) |     // Check if guess is really REALLY good :) | ||||||
|     if (cp <= rsq) { |     if (cp <= rsq) { | ||||||
|  |       TrueResidual = std::sqrt(a/ssq); | ||||||
|       std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl; |       std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl; | ||||||
|       IterationsToComplete = 0;	 |       IterationsToComplete = 0;	 | ||||||
|       return; |       return; | ||||||
| @@ -130,18 +140,20 @@ public: | |||||||
|       b = cp / c; |       b = cp / c; | ||||||
|  |  | ||||||
|       LinearCombTimer.Start(); |       LinearCombTimer.Start(); | ||||||
|       auto psi_v = psi.View(); |       { | ||||||
|       auto p_v   = p.View(); | 	autoView( psi_v , psi, AcceleratorWrite); | ||||||
|       auto r_v   = r.View(); | 	autoView( p_v   , p,   AcceleratorWrite); | ||||||
|       accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{ | 	autoView( r_v   , r,   AcceleratorWrite); | ||||||
| 	  coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss)); | 	accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{ | ||||||
| 	  coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss)); | 	    coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss)); | ||||||
|       }); | 	    coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss)); | ||||||
|  | 	}); | ||||||
|  |       } | ||||||
|       LinearCombTimer.Stop(); |       LinearCombTimer.Stop(); | ||||||
|       LinalgTimer.Stop(); |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|       std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k |       std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k | ||||||
|                 << " residual^2 " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; |                 << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|       // Stopping condition |       // Stopping condition | ||||||
|       if (cp <= rsq) { |       if (cp <= rsq) { | ||||||
| @@ -169,10 +181,17 @@ public: | |||||||
|         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); |         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); | ||||||
|  |  | ||||||
| 	IterationsToComplete = k;	 | 	IterationsToComplete = k;	 | ||||||
|  | 	TrueResidual = true_residual; | ||||||
|  |  | ||||||
|         return; |         return; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  |     // Failed. Calculate true residual before giving up                                                          | ||||||
|  |     Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||||
|  |     p = mmp - src; | ||||||
|  |  | ||||||
|  |     TrueResidual = sqrt(norm2(p)/ssq); | ||||||
|  |  | ||||||
|     std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl; |     std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl; | ||||||
|  |  | ||||||
|     if (ErrorOnNoConverge) assert(0); |     if (ErrorOnNoConverge) assert(0); | ||||||
|   | |||||||
| @@ -46,15 +46,19 @@ public: | |||||||
|  |  | ||||||
|   RealD   Tolerance; |   RealD   Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|     Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||||
|   int verbose; |   int verbose; | ||||||
|   MultiShiftFunction shifts; |   MultiShiftFunction shifts; | ||||||
|  |   std::vector<RealD> TrueResidualShift; | ||||||
|  |  | ||||||
|   ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :  |   ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :  | ||||||
|     MaxIterations(maxit), |     MaxIterations(maxit), | ||||||
|     shifts(_shifts) |     shifts(_shifts) | ||||||
|   {  |   {  | ||||||
|     verbose=1; |     verbose=1; | ||||||
|  |     IterationsToCompleteShift.resize(_shifts.order); | ||||||
|  |     TrueResidualShift.resize(_shifts.order); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) |   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||||
| @@ -125,6 +129,17 @@ public: | |||||||
|     // Residuals "r" are src |     // Residuals "r" are src | ||||||
|     // First search direction "p" is also src |     // First search direction "p" is also src | ||||||
|     cp = norm2(src); |     cp = norm2(src); | ||||||
|  |  | ||||||
|  |     // Handle trivial case of zero src. | ||||||
|  |     if( cp == 0. ){ | ||||||
|  |       for(int s=0;s<nshift;s++){ | ||||||
|  | 	psi[s] = Zero(); | ||||||
|  | 	IterationsToCompleteShift[s] = 1; | ||||||
|  | 	TrueResidualShift[s] = 0.; | ||||||
|  |       } | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|     for(int s=0;s<nshift;s++){ |     for(int s=0;s<nshift;s++){ | ||||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; |       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s |       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s | ||||||
| @@ -270,6 +285,7 @@ public: | |||||||
|       for(int s=0;s<nshift;s++){ |       for(int s=0;s<nshift;s++){ | ||||||
|        |        | ||||||
| 	if ( (!converged[s]) ){ | 	if ( (!converged[s]) ){ | ||||||
|  | 	  IterationsToCompleteShift[s] = k; | ||||||
| 	 | 	 | ||||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||||
| 	 | 	 | ||||||
| @@ -299,7 +315,8 @@ public: | |||||||
| 	  axpy(r,-alpha[s],src,tmp); | 	  axpy(r,-alpha[s],src,tmp); | ||||||
| 	  RealD rn = norm2(r); | 	  RealD rn = norm2(r); | ||||||
| 	  RealD cn = norm2(src); | 	  RealD cn = norm2(src); | ||||||
| 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<<std::sqrt(rn/cn)<<std::endl; | 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||||
|  | 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl; | ||||||
| 	} | 	} | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|   | |||||||
| @@ -54,15 +54,23 @@ class DeflatedGuesser: public LinearFunction<Field> { | |||||||
| private: | private: | ||||||
|   const std::vector<Field> &evec; |   const std::vector<Field> &evec; | ||||||
|   const std::vector<RealD> &eval; |   const std::vector<RealD> &eval; | ||||||
|  |   const unsigned int       N; | ||||||
|  |  | ||||||
| public: | public: | ||||||
|  |  | ||||||
|   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) : evec(_evec), eval(_eval) {}; |   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) | ||||||
|  |   : DeflatedGuesser(_evec, _eval, _evec.size()) | ||||||
|  |   {} | ||||||
|  |  | ||||||
|  |   DeflatedGuesser(const std::vector<Field> & _evec, const std::vector<RealD> & _eval, const unsigned int _N) | ||||||
|  |   : evec(_evec), eval(_eval), N(_N) | ||||||
|  |   { | ||||||
|  |     assert(evec.size()==eval.size()); | ||||||
|  |     assert(N <= evec.size()); | ||||||
|  |   }  | ||||||
|  |  | ||||||
|   virtual void operator()(const Field &src,Field &guess) { |   virtual void operator()(const Field &src,Field &guess) { | ||||||
|     guess = Zero(); |     guess = Zero(); | ||||||
|     assert(evec.size()==eval.size()); |  | ||||||
|     auto N = evec.size(); |  | ||||||
|     for (int i=0;i<N;i++) { |     for (int i=0;i<N;i++) { | ||||||
|       const Field& tmp = evec[i]; |       const Field& tmp = evec[i]; | ||||||
|       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); |       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); | ||||||
|   | |||||||
| @@ -37,211 +37,6 @@ Author: Christoph Lehner <clehner@bnl.gov> | |||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid);  | NAMESPACE_BEGIN(Grid);  | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////// |  | ||||||
|   // Move following 100 LOC to lattice/Lattice_basis.h |  | ||||||
|   //////////////////////////////////////////////////////// |  | ||||||
| template<class Field> |  | ||||||
| void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  |  | ||||||
| { |  | ||||||
|   // If assume basis[j] are already orthonormal, |  | ||||||
|   // can take all inner products in parallel saving 2x bandwidth |  | ||||||
|   // Save 3x bandwidth on the second line of loop. |  | ||||||
|   // perhaps 2.5x speed up. |  | ||||||
|   // 2x overall in Multigrid Lanczos   |  | ||||||
|   for(int j=0; j<k; ++j){ |  | ||||||
|     auto ip = innerProduct(basis[j],w); |  | ||||||
|     w = w - ip*basis[j]; |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisRotate(std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j0, int j1, int k0,int k1,int Nm)  |  | ||||||
| { |  | ||||||
|   typedef decltype(basis[0].View()) View; |  | ||||||
|   auto tmp_v = basis[0].View(); |  | ||||||
|   Vector<View> basis_v(basis.size(),tmp_v); |  | ||||||
|   typedef typename Field::vector_object vobj; |  | ||||||
|   GridBase* grid = basis[0].Grid(); |  | ||||||
|  |  | ||||||
|   for(int k=0;k<basis.size();k++){ |  | ||||||
|     basis_v[k] = basis[k].View(); |  | ||||||
|   } |  | ||||||
| #if 0 |  | ||||||
|   std::vector < vobj , commAllocator<vobj> > Bt(thread_max() * Nm); // Thread private |  | ||||||
|   thread_region |  | ||||||
|   { |  | ||||||
|     vobj* B = Bt.data() + Nm * thread_num(); |  | ||||||
|  |  | ||||||
|     thread_for_in_region(ss, grid->oSites(),{ |  | ||||||
|       for(int j=j0; j<j1; ++j) B[j]=0.; |  | ||||||
|        |  | ||||||
|       for(int j=j0; j<j1; ++j){ |  | ||||||
| 	for(int k=k0; k<k1; ++k){ |  | ||||||
| 	  B[j] +=Qt(j,k) * basis_v[k][ss]; |  | ||||||
| 	} |  | ||||||
|       } |  | ||||||
|       for(int j=j0; j<j1; ++j){ |  | ||||||
| 	basis_v[j][ss] = B[j]; |  | ||||||
|       } |  | ||||||
|     }); |  | ||||||
|   } |  | ||||||
| #else |  | ||||||
|  |  | ||||||
|   int nrot = j1-j0; |  | ||||||
|  |  | ||||||
|  |  | ||||||
|   uint64_t oSites   =grid->oSites(); |  | ||||||
|   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead |  | ||||||
|  |  | ||||||
|   //  printf("BasisRotate %d %d nrot %d siteBlock %d\n",j0,j1,nrot,siteBlock); |  | ||||||
|  |  | ||||||
|   Vector <vobj> Bt(siteBlock * nrot);  |  | ||||||
|   auto Bp=&Bt[0]; |  | ||||||
|  |  | ||||||
|   // GPU readable copy of Eigen matrix |  | ||||||
|   Vector<double> Qt_jv(Nm*Nm); |  | ||||||
|   double *Qt_p = & Qt_jv[0]; |  | ||||||
|   for(int k=0;k<Nm;++k){ |  | ||||||
|     for(int j=0;j<Nm;++j){ |  | ||||||
|       Qt_p[j*Nm+k]=Qt(j,k); |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   // Block the loop to keep storage footprint down |  | ||||||
|   vobj zz=Zero(); |  | ||||||
|   for(uint64_t s=0;s<oSites;s+=siteBlock){ |  | ||||||
|  |  | ||||||
|     // remaining work in this block |  | ||||||
|     int ssites=MIN(siteBlock,oSites-s); |  | ||||||
|  |  | ||||||
|     // zero out the accumulators |  | ||||||
|     accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{ |  | ||||||
| 	auto z=coalescedRead(zz); |  | ||||||
| 	coalescedWrite(Bp[ss],z); |  | ||||||
|     }); |  | ||||||
|  |  | ||||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ |  | ||||||
| 	 |  | ||||||
|       int j =sj%nrot; |  | ||||||
|       int jj  =j0+j; |  | ||||||
|       int ss =sj/nrot; |  | ||||||
|       int sss=ss+s; |  | ||||||
|  |  | ||||||
|       for(int k=k0; k<k1; ++k){ |  | ||||||
| 	auto tmp = coalescedRead(Bp[ss*nrot+j]); |  | ||||||
| 	coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss])); |  | ||||||
|       } |  | ||||||
|     }); |  | ||||||
|  |  | ||||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ |  | ||||||
|       int j =sj%nrot; |  | ||||||
|       int jj  =j0+j; |  | ||||||
|       int ss =sj/nrot; |  | ||||||
|       int sss=ss+s; |  | ||||||
|       coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j])); |  | ||||||
|     }); |  | ||||||
|   } |  | ||||||
| #endif |  | ||||||
| } |  | ||||||
|  |  | ||||||
| // Extract a single rotated vector |  | ||||||
| template<class Field> |  | ||||||
| void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  |  | ||||||
| { |  | ||||||
|   typedef decltype(basis[0].View()) View; |  | ||||||
|   typedef typename Field::vector_object vobj; |  | ||||||
|   GridBase* grid = basis[0].Grid(); |  | ||||||
|  |  | ||||||
|   result.Checkerboard() = basis[0].Checkerboard(); |  | ||||||
|   auto result_v=result.View(); |  | ||||||
|   Vector<View> basis_v(basis.size(),result_v); |  | ||||||
|   for(int k=0;k<basis.size();k++){ |  | ||||||
|     basis_v[k] = basis[k].View(); |  | ||||||
|   } |  | ||||||
|   vobj zz=Zero(); |  | ||||||
|   Vector<double> Qt_jv(Nm); |  | ||||||
|   double * Qt_j = & Qt_jv[0]; |  | ||||||
|   for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k); |  | ||||||
|   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{ |  | ||||||
|     auto B=coalescedRead(zz); |  | ||||||
|     for(int k=k0; k<k1; ++k){ |  | ||||||
|       B +=Qt_j[k] * coalescedRead(basis_v[k][ss]); |  | ||||||
|     } |  | ||||||
|     coalescedWrite(result_v[ss], B); |  | ||||||
|   }); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  |  | ||||||
| { |  | ||||||
|   int vlen = idx.size(); |  | ||||||
|  |  | ||||||
|   assert(vlen>=1); |  | ||||||
|   assert(vlen<=sort_vals.size()); |  | ||||||
|   assert(vlen<=_v.size()); |  | ||||||
|  |  | ||||||
|   for (size_t i=0;i<vlen;i++) { |  | ||||||
|  |  | ||||||
|     if (idx[i] != i) { |  | ||||||
|  |  | ||||||
|       ////////////////////////////////////// |  | ||||||
|       // idx[i] is a table of desired sources giving a permutation. |  | ||||||
|       // Swap v[i] with v[idx[i]]. |  | ||||||
|       // Find  j>i for which _vnew[j] = _vold[i], |  | ||||||
|       // track the move idx[j] => idx[i] |  | ||||||
|       // track the move idx[i] => i |  | ||||||
|       ////////////////////////////////////// |  | ||||||
|       size_t j; |  | ||||||
|       for (j=i;j<idx.size();j++) |  | ||||||
| 	if (idx[j]==i) |  | ||||||
| 	  break; |  | ||||||
|  |  | ||||||
|       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); |  | ||||||
|  |  | ||||||
|       swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy |  | ||||||
|       std::swap(sort_vals[i],sort_vals[idx[i]]); |  | ||||||
|  |  | ||||||
|       idx[j] = idx[i]; |  | ||||||
|       idx[i] = i; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  |  | ||||||
| { |  | ||||||
|   std::vector<int> idx(sort_vals.size()); |  | ||||||
|   std::iota(idx.begin(), idx.end(), 0); |  | ||||||
|  |  | ||||||
|   // sort indexes based on comparing values in v |  | ||||||
|   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { |  | ||||||
|     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); |  | ||||||
|   }); |  | ||||||
|   return idx; |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  |  | ||||||
| { |  | ||||||
|   std::vector<int> idx = basisSortGetIndex(sort_vals); |  | ||||||
|   if (reverse) |  | ||||||
|     std::reverse(idx.begin(), idx.end()); |  | ||||||
|    |  | ||||||
|   basisReorderInPlace(_v,sort_vals,idx); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| // PAB: faster to compute the inner products first then fuse loops. |  | ||||||
| // If performance critical can improve. |  | ||||||
| template<class Field> |  | ||||||
| void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) { |  | ||||||
|   result = Zero(); |  | ||||||
|   assert(_v.size()==eval.size()); |  | ||||||
|   int N = (int)_v.size(); |  | ||||||
|   for (int i=0;i<N;i++) { |  | ||||||
|     Field& tmp = _v[i]; |  | ||||||
|     axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result); |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Implicitly restarted lanczos | // Implicitly restarted lanczos | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
|   | |||||||
| @@ -0,0 +1,241 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_PREC_GCR_NON_HERM_H | ||||||
|  | #define GRID_PREC_GCR_NON_HERM_H | ||||||
|  |  | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | //VPGCR Abe and Zhang, 2005. | ||||||
|  | //INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING | ||||||
|  | //Computing and Information Volume 2, Number 2, Pages 147-161 | ||||||
|  | //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||||
|  | //    but VPGCR was nicely written up in their paper | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> { | ||||||
|  | public:                                                 | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   int verbose; | ||||||
|  |   int mmax; | ||||||
|  |   int nstep; | ||||||
|  |   int steps; | ||||||
|  |   int level; | ||||||
|  |   GridStopWatch PrecTimer; | ||||||
|  |   GridStopWatch MatTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |  | ||||||
|  |   LinearFunction<Field>     &Preconditioner; | ||||||
|  |   LinearOperatorBase<Field> &Linop; | ||||||
|  |  | ||||||
|  |   void Level(int lv) { level=lv; }; | ||||||
|  |  | ||||||
|  |   PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||||
|  |     Tolerance(tol),  | ||||||
|  |     MaxIterations(maxit), | ||||||
|  |     Linop(_Linop), | ||||||
|  |     Preconditioner(Prec), | ||||||
|  |     mmax(_mmax), | ||||||
|  |     nstep(_nstep) | ||||||
|  |   {  | ||||||
|  |     level=1; | ||||||
|  |     verbose=1; | ||||||
|  |   }; | ||||||
|  |  | ||||||
|  |   void operator() (const Field &src, Field &psi){ | ||||||
|  |  | ||||||
|  |     psi=Zero(); | ||||||
|  |     RealD cp, ssq,rsq; | ||||||
|  |     ssq=norm2(src); | ||||||
|  |     rsq=Tolerance*Tolerance*ssq; | ||||||
|  |        | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     PrecTimer.Reset(); | ||||||
|  |     MatTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     steps=0; | ||||||
|  |     for(int k=0;k<MaxIterations;k++){ | ||||||
|  |  | ||||||
|  |       cp=GCRnStep(src,psi,rsq); | ||||||
|  |  | ||||||
|  |       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||||
|  |  | ||||||
|  |       if(cp<rsq) { | ||||||
|  |  | ||||||
|  | 	SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  | 	Linop.Op(psi,r); | ||||||
|  | 	axpy(r,-1.0,src,r); | ||||||
|  | 	RealD tr = norm2(r); | ||||||
|  | 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||||
|  | 		 << " computed residual "<<sqrt(cp/ssq) | ||||||
|  | 		 << " true residual "    <<sqrt(tr/ssq) | ||||||
|  | 		 << " target "           <<Tolerance <<std::endl; | ||||||
|  |  | ||||||
|  | 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||||
|  | 	return; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |     } | ||||||
|  |     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||||
|  |     //    assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     ComplexD a, b, zAz; | ||||||
|  |     RealD zAAz; | ||||||
|  |     ComplexD rq; | ||||||
|  |  | ||||||
|  |     GridBase *grid = src.Grid(); | ||||||
|  |  | ||||||
|  |     Field r(grid); | ||||||
|  |     Field z(grid); | ||||||
|  |     Field tmp(grid); | ||||||
|  |     Field ttmp(grid); | ||||||
|  |     Field Az(grid); | ||||||
|  |  | ||||||
|  |     //////////////////////////////// | ||||||
|  |     // history for flexible orthog | ||||||
|  |     //////////////////////////////// | ||||||
|  |     std::vector<Field> q(mmax,grid); | ||||||
|  |     std::vector<Field> p(mmax,grid); | ||||||
|  |     std::vector<RealD> qq(mmax); | ||||||
|  |        | ||||||
|  |     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||||
|  |  | ||||||
|  |     ////////////////////////////////// | ||||||
|  |     // initial guess x0 is taken as nonzero. | ||||||
|  |     // r0=src-A x0 = src | ||||||
|  |     ////////////////////////////////// | ||||||
|  |     MatTimer.Start(); | ||||||
|  |     Linop.Op(psi,Az); | ||||||
|  |     zAz = innerProduct(Az,psi); | ||||||
|  |     zAAz= norm2(Az); | ||||||
|  |     MatTimer.Stop(); | ||||||
|  |      | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r=src-Az; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||||
|  |      | ||||||
|  |     ///////////////////// | ||||||
|  |     // p = Prec(r) | ||||||
|  |     ///////////////////// | ||||||
|  |  | ||||||
|  |     PrecTimer.Start(); | ||||||
|  |     Preconditioner(r,z); | ||||||
|  |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     MatTimer.Start(); | ||||||
|  |     Linop.Op(z,Az); | ||||||
|  |     MatTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |  | ||||||
|  |     zAz = innerProduct(Az,psi); | ||||||
|  |     zAAz= norm2(Az); | ||||||
|  |  | ||||||
|  |     //p[0],q[0],qq[0]  | ||||||
|  |     p[0]= z; | ||||||
|  |     q[0]= Az; | ||||||
|  |     qq[0]= zAAz; | ||||||
|  |      | ||||||
|  |     cp =norm2(r); | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for(int k=0;k<nstep;k++){ | ||||||
|  |  | ||||||
|  |       steps++; | ||||||
|  |  | ||||||
|  |       int kp     = k+1; | ||||||
|  |       int peri_k = k %mmax; | ||||||
|  |       int peri_kp= kp%mmax; | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|  |       rq= innerProduct(q[peri_k],r); // what if rAr not real? | ||||||
|  |       a = rq/qq[peri_k]; | ||||||
|  |  | ||||||
|  |       axpy(psi,a,p[peri_k],psi);          | ||||||
|  |  | ||||||
|  |       cp = axpy_norm(r,-a,q[peri_k],r); | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||||
|  |  | ||||||
|  |       if((k==nstep-1)||(cp<rsq)){ | ||||||
|  | 	return cp; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       PrecTimer.Start(); | ||||||
|  |       Preconditioner(r,z);// solve Az = r | ||||||
|  |       PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |       MatTimer.Start(); | ||||||
|  |       Linop.Op(z,Az); | ||||||
|  |       MatTimer.Stop(); | ||||||
|  |       zAz = innerProduct(Az,psi); | ||||||
|  |       zAAz= norm2(Az); | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|  |  | ||||||
|  |       q[peri_kp]=Az; | ||||||
|  |       p[peri_kp]=z; | ||||||
|  |  | ||||||
|  |       int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history. | ||||||
|  |       for(int back=0;back<northog;back++){ | ||||||
|  |  | ||||||
|  | 	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0); | ||||||
|  |  | ||||||
|  | 	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back]; | ||||||
|  | 	p[peri_kp]=p[peri_kp]+b*p[peri_back]; | ||||||
|  | 	q[peri_kp]=q[peri_kp]+b*q[peri_back]; | ||||||
|  |  | ||||||
|  |       } | ||||||
|  |       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |     } | ||||||
|  |     assert(0); // never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  | #endif | ||||||
| @@ -132,6 +132,31 @@ namespace Grid { | |||||||
|       (*this)(_Matrix,in,out,guess); |       (*this)(_Matrix,in,out,guess); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|  |     void RedBlackSource(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &src_o)  | ||||||
|  |     { | ||||||
|  |       GridBase *grid = _Matrix.RedBlackGrid(); | ||||||
|  |       Field tmp(grid); | ||||||
|  |       int nblock = in.size(); | ||||||
|  |       for(int b=0;b<nblock;b++){ | ||||||
|  | 	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |     // James can write his own deflated guesser | ||||||
|  |     // with optimised code for the inner products | ||||||
|  |     //    RedBlackSolveSplitGrid(); | ||||||
|  |     //    RedBlackSolve(_Matrix,src_o,sol_o);  | ||||||
|  |  | ||||||
|  |     void RedBlackSolution(Matrix &_Matrix, const std::vector<Field> &in, const std::vector<Field> &sol_o, std::vector<Field> &out) | ||||||
|  |     { | ||||||
|  |       GridBase *grid = _Matrix.RedBlackGrid(); | ||||||
|  |       Field tmp(grid); | ||||||
|  |       int nblock = in.size(); | ||||||
|  |       for(int b=0;b<nblock;b++) { | ||||||
|  | 	pickCheckerboard(Even,tmp,in[b]); | ||||||
|  | 	RedBlackSolution(_Matrix,sol_o[b],tmp,out[b]); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|     template<class Guesser> |     template<class Guesser> | ||||||
|     void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out,Guesser &guess)  |     void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out,Guesser &guess)  | ||||||
|     { |     { | ||||||
| @@ -150,24 +175,29 @@ namespace Grid { | |||||||
|       //////////////////////////////////////////////// |       //////////////////////////////////////////////// | ||||||
|       // Prepare RedBlack source |       // Prepare RedBlack source | ||||||
|       //////////////////////////////////////////////// |       //////////////////////////////////////////////// | ||||||
|       for(int b=0;b<nblock;b++){ |       RedBlackSource(_Matrix,in,src_o); | ||||||
| 	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | 	//      for(int b=0;b<nblock;b++){ | ||||||
|       } | 	//	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||||
|  | 	//      } | ||||||
|  |        | ||||||
|       //////////////////////////////////////////////// |       //////////////////////////////////////////////// | ||||||
|       // Make the guesses |       // Make the guesses | ||||||
|       //////////////////////////////////////////////// |       //////////////////////////////////////////////// | ||||||
|       if ( subGuess ) guess_save.resize(nblock,grid); |       if ( subGuess ) guess_save.resize(nblock,grid); | ||||||
|  |  | ||||||
|       for(int b=0;b<nblock;b++){ |  | ||||||
|         if(useSolnAsInitGuess) { |  | ||||||
|           pickCheckerboard(Odd, sol_o[b], out[b]); |  | ||||||
|         } else { |  | ||||||
|           guess(src_o[b],sol_o[b]);  |  | ||||||
|         } |  | ||||||
|        |        | ||||||
| 	if ( subGuess ) {  |       if(useSolnAsInitGuess) { | ||||||
| 	  guess_save[b] = sol_o[b]; |         for(int b=0;b<nblock;b++){ | ||||||
| 	} |           pickCheckerboard(Odd, sol_o[b], out[b]); | ||||||
|  |         } | ||||||
|  |       } else { | ||||||
|  |         guess(src_o, sol_o);  | ||||||
|  |       } | ||||||
|  |  | ||||||
|  | 	    if ( subGuess ) {  | ||||||
|  |         for(int b=0;b<nblock;b++){ | ||||||
|  |           guess_save[b] = sol_o[b]; | ||||||
|  |         } | ||||||
|       } |       } | ||||||
|       ////////////////////////////////////////////////////////////// |       ////////////////////////////////////////////////////////////// | ||||||
|       // Call the block solver |       // Call the block solver | ||||||
| @@ -405,6 +435,70 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|  |   template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field>  | ||||||
|  |   { | ||||||
|  |     public: | ||||||
|  |       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|  |       NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||||
|  |           const bool _solnAsInitGuess = false)   | ||||||
|  |       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|  |       ////////////////////////////////////////////////////// | ||||||
|  |       // Override RedBlack specialisation | ||||||
|  |       ////////////////////////////////////////////////////// | ||||||
|  |       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field  tmp(grid); | ||||||
|  |         Field Mtmp(grid); | ||||||
|  |  | ||||||
|  |         pickCheckerboard(Even, src_e, src); | ||||||
|  |         pickCheckerboard(Odd , src_o, src); | ||||||
|  |  | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||||
|  |         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field     tmp(grid); | ||||||
|  |         Field   sol_e(grid); | ||||||
|  |         Field src_e_i(grid); | ||||||
|  |          | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         _Matrix.Meooe(sol_o, tmp);         assert(     tmp.Checkerboard() == Even ); | ||||||
|  |         src_e_i = src_e - tmp;             assert( src_e_i.Checkerboard() == Even ); | ||||||
|  |         _Matrix.MooeeInv(src_e_i, sol_e);  assert(   sol_e.Checkerboard() == Even ); | ||||||
|  |         | ||||||
|  |         setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even ); | ||||||
|  |         setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd  ); | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  assert(sol_o.Checkerboard() == Odd); | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||||
|  |       } | ||||||
|  |   }; | ||||||
|  |  | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Site diagonal is identity, right preconditioned by Mee^inv |   // Site diagonal is identity, right preconditioned by Mee^inv | ||||||
|   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta |   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta | ||||||
| @@ -482,5 +576,76 @@ namespace Grid { | |||||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  |       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|  |   template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field>  | ||||||
|  |   { | ||||||
|  |     public: | ||||||
|  |       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|  |       ///////////////////////////////////////////////////// | ||||||
|  |       // Wrap the usual normal equations Schur trick | ||||||
|  |       ///////////////////////////////////////////////////// | ||||||
|  |       NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||||
|  |           const bool _solnAsInitGuess = false)   | ||||||
|  |       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field  tmp(grid); | ||||||
|  |         Field Mtmp(grid); | ||||||
|  |  | ||||||
|  |         pickCheckerboard(Even, src_e, src); | ||||||
|  |         pickCheckerboard(Odd , src_o, src); | ||||||
|  |        | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||||
|  |         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field sol_o_i(grid); | ||||||
|  |         Field     tmp(grid); | ||||||
|  |         Field   sol_e(grid); | ||||||
|  |  | ||||||
|  |         //////////////////////////////////////////////// | ||||||
|  |         // MooeeInv due to pecond | ||||||
|  |         //////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(sol_o, tmp); | ||||||
|  |         sol_o_i = tmp; | ||||||
|  |  | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         _Matrix.Meooe(sol_o_i, tmp);    assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         tmp = src_e - tmp;              assert( src_e.Checkerboard() == Even ); | ||||||
|  |         _Matrix.MooeeInv(tmp, sol_e);   assert( sol_e.Checkerboard() == Even ); | ||||||
|  |         | ||||||
|  |         setCheckerboard(sol, sol_e);    assert(   sol_e.Checkerboard() == Even ); | ||||||
|  |         setCheckerboard(sol, sol_o_i);  assert( sol_o_i.Checkerboard() == Odd  ); | ||||||
|  |       }; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o); | ||||||
|  |       }; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o,  std::vector<Field>& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||||
|  |       } | ||||||
|  |   }; | ||||||
| } | } | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -26,118 +26,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef GRID_ALIGNED_ALLOCATOR_H | #pragma once | ||||||
| #define GRID_ALIGNED_ALLOCATOR_H |  | ||||||
|  |  | ||||||
| #ifdef HAVE_MALLOC_MALLOC_H |  | ||||||
| #include <malloc/malloc.h> |  | ||||||
| #endif |  | ||||||
| #ifdef HAVE_MALLOC_H |  | ||||||
| #include <malloc.h> |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #ifdef HAVE_MM_MALLOC_H |  | ||||||
| #include <mm_malloc.h> |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #define POINTER_CACHE |  | ||||||
| #define GRID_ALLOC_ALIGN (2*1024*1024) |  | ||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| // Move control to configure.ac and Config.h? |  | ||||||
| #ifdef POINTER_CACHE |  | ||||||
| class PointerCache { |  | ||||||
| private: |  | ||||||
| /*Pinning pages is costly*/ |  | ||||||
| /*Could maintain separate large and small allocation caches*/ |  | ||||||
| #ifdef GRID_NVCC  |  | ||||||
|   static const int Ncache=128; |  | ||||||
| #else |  | ||||||
|   static const int Ncache=8; |  | ||||||
| #endif |  | ||||||
|   static int victim; |  | ||||||
|  |  | ||||||
|   typedef struct {  |  | ||||||
|     void *address; |  | ||||||
|     size_t bytes; |  | ||||||
|     int valid; |  | ||||||
|   } PointerCacheEntry; |  | ||||||
|      |  | ||||||
|   static PointerCacheEntry Entries[Ncache]; |  | ||||||
|  |  | ||||||
| public: |  | ||||||
|  |  | ||||||
|   static void *Insert(void *ptr,size_t bytes) ; |  | ||||||
|   static void *Lookup(size_t bytes) ; |  | ||||||
|  |  | ||||||
| }; |  | ||||||
| #endif   |  | ||||||
|  |  | ||||||
| std::string sizeString(size_t bytes); |  | ||||||
|  |  | ||||||
| struct MemoryStats |  | ||||||
| { |  | ||||||
|   size_t totalAllocated{0}, maxAllocated{0},  |  | ||||||
|     currentlyAllocated{0}, totalFreed{0}; |  | ||||||
| }; |  | ||||||
|      |  | ||||||
| class MemoryProfiler |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|   static MemoryStats *stats; |  | ||||||
|   static bool        debug; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" |  | ||||||
| #define profilerDebugPrint						\ |  | ||||||
|   if (MemoryProfiler::stats)						\ |  | ||||||
|     {									\ |  | ||||||
|       auto s = MemoryProfiler::stats;					\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ |  | ||||||
| 		<< std::endl;						\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ |  | ||||||
| 		<< std::endl;						\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ |  | ||||||
| 		<< std::endl;						\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ |  | ||||||
| 		<< std::endl;						\ |  | ||||||
|     } |  | ||||||
|  |  | ||||||
| #define profilerAllocate(bytes)						\ |  | ||||||
|   if (MemoryProfiler::stats)						\ |  | ||||||
|     {									\ |  | ||||||
|       auto s = MemoryProfiler::stats;					\ |  | ||||||
|       s->totalAllocated     += (bytes);					\ |  | ||||||
|       s->currentlyAllocated += (bytes);					\ |  | ||||||
|       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ |  | ||||||
|     }									\ |  | ||||||
|   if (MemoryProfiler::debug)						\ |  | ||||||
|     {									\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ |  | ||||||
|       profilerDebugPrint;						\ |  | ||||||
|     } |  | ||||||
|  |  | ||||||
| #define profilerFree(bytes)						\ |  | ||||||
|   if (MemoryProfiler::stats)						\ |  | ||||||
|     {									\ |  | ||||||
|       auto s = MemoryProfiler::stats;					\ |  | ||||||
|       s->totalFreed         += (bytes);					\ |  | ||||||
|       s->currentlyAllocated -= (bytes);					\ |  | ||||||
|     }									\ |  | ||||||
|   if (MemoryProfiler::debug)						\ |  | ||||||
|     {									\ |  | ||||||
|       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ |  | ||||||
|       profilerDebugPrint;						\ |  | ||||||
|     } |  | ||||||
|  |  | ||||||
| void check_huge_pages(void *Buf,uint64_t BYTES); |  | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////// |  | ||||||
| // A lattice of something, but assume the something is SIMDized. |  | ||||||
| //////////////////////////////////////////////////////////////////// |  | ||||||
|  |  | ||||||
| template<typename _Tp> | template<typename _Tp> | ||||||
| class alignedAllocator { | class alignedAllocator { | ||||||
| public:  | public:  | ||||||
| @@ -161,89 +53,131 @@ public: | |||||||
|   {  |   {  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |     size_type bytes = __n*sizeof(_Tp); | ||||||
|     profilerAllocate(bytes); |     profilerAllocate(bytes); | ||||||
|  |     _Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes); | ||||||
|  |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
| #ifdef POINTER_CACHE |  | ||||||
|     _Tp *ptr = (_Tp *) PointerCache::Lookup(bytes); |  | ||||||
| #else |  | ||||||
|     pointer ptr = nullptr; |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #ifdef GRID_NVCC |  | ||||||
|     //////////////////////////////////// |  | ||||||
|     // Unified (managed) memory |  | ||||||
|     //////////////////////////////////// |  | ||||||
|     if ( ptr == (_Tp *) NULL ) { |  | ||||||
|       //      printf(" alignedAllocater cache miss %ld bytes ",bytes);      BACKTRACEFP(stdout); |  | ||||||
|       auto err = cudaMallocManaged((void **)&ptr,bytes); |  | ||||||
|       if( err != cudaSuccess ) { |  | ||||||
| 	ptr = (_Tp *) NULL; |  | ||||||
| 	std::cerr << " cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl; |  | ||||||
| 	assert(0); |  | ||||||
|       } |  | ||||||
|     }  |  | ||||||
|     assert( ptr != (_Tp *)NULL); |  | ||||||
| #else  |  | ||||||
|     ////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|     // 2MB align; could make option probably doesn't need configurability |  | ||||||
|     ////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   #ifdef HAVE_MM_MALLOC_H |  | ||||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) _mm_malloc(bytes,GRID_ALLOC_ALIGN); |  | ||||||
|   #else |  | ||||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN,bytes); |  | ||||||
|   #endif |  | ||||||
|     assert( ptr != (_Tp *)NULL); |  | ||||||
|  |  | ||||||
|     ////////////////////////////////////////////////// |  | ||||||
|     // First touch optimise in threaded loop  |  | ||||||
|     ////////////////////////////////////////////////// |  | ||||||
|     uint64_t *cp = (uint64_t *)ptr; |  | ||||||
|     thread_for(n,bytes/sizeof(uint64_t), { // need only one touch per page |  | ||||||
|       cp[n]=0; |  | ||||||
|     }); |  | ||||||
| #endif |  | ||||||
|     return ptr; |     return ptr; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   void deallocate(pointer __p, size_type __n) {  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|     size_type bytes = __n * sizeof(_Tp); |     size_type bytes = __n * sizeof(_Tp); | ||||||
|  |  | ||||||
|     profilerFree(bytes); |     profilerFree(bytes); | ||||||
|  |     MemoryManager::CpuFree((void *)__p,bytes); | ||||||
| #ifdef POINTER_CACHE |  | ||||||
|     pointer __freeme = (pointer)PointerCache::Insert((void *)__p,bytes); |  | ||||||
| #else  |  | ||||||
|     pointer __freeme = __p; |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #ifdef GRID_NVCC |  | ||||||
|     if ( __freeme ) cudaFree((void *)__freeme); |  | ||||||
| #else  |  | ||||||
|   #ifdef HAVE_MM_MALLOC_H |  | ||||||
|     if ( __freeme ) _mm_free((void *)__freeme);  |  | ||||||
|   #else |  | ||||||
|     if ( __freeme ) free((void *)__freeme); |  | ||||||
|   #endif |  | ||||||
| #endif |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   // FIXME: hack for the copy constructor, eventually it must be avoided |   // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop | ||||||
|   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; |   void construct(pointer __p, const _Tp& __val) { assert(0);}; | ||||||
|   //void construct(pointer __p, const _Tp& __val) { }; |  | ||||||
|   void construct(pointer __p) { }; |   void construct(pointer __p) { }; | ||||||
|   void destroy(pointer __p) { }; |   void destroy(pointer __p) { }; | ||||||
| }; | }; | ||||||
| template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | ||||||
| template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Unified virtual memory | ||||||
|  | ////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<typename _Tp> | ||||||
|  | class uvmAllocator { | ||||||
|  | public:  | ||||||
|  |   typedef std::size_t     size_type; | ||||||
|  |   typedef std::ptrdiff_t  difference_type; | ||||||
|  |   typedef _Tp*       pointer; | ||||||
|  |   typedef const _Tp* const_pointer; | ||||||
|  |   typedef _Tp&       reference; | ||||||
|  |   typedef const _Tp& const_reference; | ||||||
|  |   typedef _Tp        value_type; | ||||||
|  |  | ||||||
|  |   template<typename _Tp1>  struct rebind { typedef uvmAllocator<_Tp1> other; }; | ||||||
|  |   uvmAllocator() throw() { } | ||||||
|  |   uvmAllocator(const uvmAllocator&) throw() { } | ||||||
|  |   template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { } | ||||||
|  |   ~uvmAllocator() throw() { } | ||||||
|  |   pointer       address(reference __x)       const { return &__x; } | ||||||
|  |   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||||
|  |  | ||||||
|  |   pointer allocate(size_type __n, const void* _p= 0) | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n*sizeof(_Tp); | ||||||
|  |     profilerAllocate(bytes); | ||||||
|  |     _Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes); | ||||||
|  |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
|  |     return ptr; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n * sizeof(_Tp); | ||||||
|  |     profilerFree(bytes); | ||||||
|  |     MemoryManager::SharedFree((void *)__p,bytes); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; | ||||||
|  |   void construct(pointer __p) { }; | ||||||
|  |   void destroy(pointer __p) { }; | ||||||
|  | }; | ||||||
|  | template<typename _Tp>  inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; } | ||||||
|  | template<typename _Tp>  inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Device memory | ||||||
|  | //////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<typename _Tp> | ||||||
|  | class devAllocator { | ||||||
|  | public:  | ||||||
|  |   typedef std::size_t     size_type; | ||||||
|  |   typedef std::ptrdiff_t  difference_type; | ||||||
|  |   typedef _Tp*       pointer; | ||||||
|  |   typedef const _Tp* const_pointer; | ||||||
|  |   typedef _Tp&       reference; | ||||||
|  |   typedef const _Tp& const_reference; | ||||||
|  |   typedef _Tp        value_type; | ||||||
|  |  | ||||||
|  |   template<typename _Tp1>  struct rebind { typedef devAllocator<_Tp1> other; }; | ||||||
|  |   devAllocator() throw() { } | ||||||
|  |   devAllocator(const devAllocator&) throw() { } | ||||||
|  |   template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { } | ||||||
|  |   ~devAllocator() throw() { } | ||||||
|  |   pointer       address(reference __x)       const { return &__x; } | ||||||
|  |   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||||
|  |  | ||||||
|  |   pointer allocate(size_type __n, const void* _p= 0) | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n*sizeof(_Tp); | ||||||
|  |     profilerAllocate(bytes); | ||||||
|  |     _Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes); | ||||||
|  |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
|  |     return ptr; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n * sizeof(_Tp); | ||||||
|  |     profilerFree(bytes); | ||||||
|  |     MemoryManager::AcceleratorFree((void *)__p,bytes); | ||||||
|  |   } | ||||||
|  |   void construct(pointer __p, const _Tp& __val) { }; | ||||||
|  |   void construct(pointer __p) { }; | ||||||
|  |   void destroy(pointer __p) { }; | ||||||
|  | }; | ||||||
|  | template<typename _Tp>  inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; } | ||||||
|  | template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////// | ||||||
| // Template typedefs | // Template typedefs | ||||||
| //////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class T> using commAllocator = alignedAllocator<T>; | #ifdef ACCELERATOR_CSHIFT | ||||||
| template<class T> using Vector     = std::vector<T,alignedAllocator<T> >;            | // Cshift on device | ||||||
| template<class T> using commVector = std::vector<T,alignedAllocator<T> >; | template<class T> using cshiftAllocator = devAllocator<T>; | ||||||
| template<class T> using Matrix     = std::vector<std::vector<T,alignedAllocator<T> > >; | #else | ||||||
|  | // Cshift on host | ||||||
|  | template<class T> using cshiftAllocator = std::allocator<T>; | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | template<class T> using Vector        = std::vector<T,uvmAllocator<T> >;            | ||||||
|  | template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;            | ||||||
|  | template<class T> using commVector = std::vector<T,devAllocator<T> >; | ||||||
|  | template<class T> using cshiftVector = std::vector<T,cshiftAllocator<T> >; | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif |  | ||||||
|   | |||||||
							
								
								
									
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							| @@ -0,0 +1,4 @@ | |||||||
|  | #pragma once | ||||||
|  | #include <Grid/allocator/MemoryStats.h> | ||||||
|  | #include <Grid/allocator/MemoryManager.h> | ||||||
|  | #include <Grid/allocator/AlignedAllocator.h> | ||||||
							
								
								
									
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							| @@ -0,0 +1,254 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | /*Allocation types, saying which pointer cache should be used*/ | ||||||
|  | #define Cpu      (0) | ||||||
|  | #define CpuSmall (1) | ||||||
|  | #define Acc      (2) | ||||||
|  | #define AccSmall (3) | ||||||
|  | #define Shared   (4) | ||||||
|  | #define SharedSmall (5) | ||||||
|  | uint64_t total_shared; | ||||||
|  | uint64_t total_device; | ||||||
|  | uint64_t total_host;; | ||||||
|  | void MemoryManager::PrintBytes(void) | ||||||
|  | { | ||||||
|  |   std::cout << " MemoryManager : "<<total_shared<<" shared      bytes "<<std::endl; | ||||||
|  |   std::cout << " MemoryManager : "<<total_device<<" accelerator bytes "<<std::endl; | ||||||
|  |   std::cout << " MemoryManager : "<<total_host  <<" cpu         bytes "<<std::endl; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | // Data tables for recently freed pooiniter caches | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax]; | ||||||
|  | int MemoryManager::Victim[MemoryManager::NallocType]; | ||||||
|  | int MemoryManager::Ncache[MemoryManager::NallocType] = { 8, 32, 8, 32, 8, 32 }; | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | // Actual allocation and deallocation utils | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | void *MemoryManager::AcceleratorAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Acc); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocDevice(bytes); | ||||||
|  |     total_device+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::AcceleratorFree    (void *ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   void *__freeme = Insert(ptr,bytes,Acc); | ||||||
|  |   if ( __freeme ) { | ||||||
|  |     acceleratorFreeDevice(__freeme); | ||||||
|  |     total_device-=bytes; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void *MemoryManager::SharedAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Shared); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocShared(bytes); | ||||||
|  |     total_shared+=bytes; | ||||||
|  |     //    std::cout <<"AcceleratorAllocate: allocated Shared pointer "<<std::hex<<ptr<<std::dec<<std::endl; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::SharedFree    (void *ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   void *__freeme = Insert(ptr,bytes,Shared); | ||||||
|  |   if ( __freeme ) { | ||||||
|  |     acceleratorFreeShared(__freeme); | ||||||
|  |     total_shared-=bytes; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #ifdef GRID_UVM | ||||||
|  | void *MemoryManager::CpuAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Cpu); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocShared(bytes); | ||||||
|  |     total_host+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   NotifyDeletion(_ptr); | ||||||
|  |   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||||
|  |   if ( __freeme ) {  | ||||||
|  |     acceleratorFreeShared(__freeme); | ||||||
|  |     total_host-=bytes; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #else | ||||||
|  | void *MemoryManager::CpuAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Cpu); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocCpu(bytes); | ||||||
|  |     total_host+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   NotifyDeletion(_ptr); | ||||||
|  |   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||||
|  |   if ( __freeme ) {  | ||||||
|  |     acceleratorFreeCpu(__freeme); | ||||||
|  |     total_host-=bytes; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////// | ||||||
|  | // call only once | ||||||
|  | ////////////////////////////////////////// | ||||||
|  | void MemoryManager::Init(void) | ||||||
|  | { | ||||||
|  |  | ||||||
|  |   char * str; | ||||||
|  |   int Nc; | ||||||
|  |   int NcS; | ||||||
|  |    | ||||||
|  |   str= getenv("GRID_ALLOC_NCACHE_LARGE"); | ||||||
|  |   if ( str ) { | ||||||
|  |     Nc = atoi(str); | ||||||
|  |     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||||
|  |       Ncache[Cpu]=Nc; | ||||||
|  |       Ncache[Acc]=Nc; | ||||||
|  |       Ncache[Shared]=Nc; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   str= getenv("GRID_ALLOC_NCACHE_SMALL"); | ||||||
|  |   if ( str ) { | ||||||
|  |     Nc = atoi(str); | ||||||
|  |     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||||
|  |       Ncache[CpuSmall]=Nc; | ||||||
|  |       Ncache[AccSmall]=Nc; | ||||||
|  |       Ncache[SharedSmall]=Nc; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::InitMessage(void) { | ||||||
|  |  | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |   std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl; | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl; | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<std::endl; | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  | #ifdef GRID_UVM | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #else | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Insert(void *ptr,size_t bytes,int type)  | ||||||
|  | { | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   bool small = (bytes < GRID_ALLOC_SMALL_LIMIT); | ||||||
|  |   int cache = type + small; | ||||||
|  |   return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache]);   | ||||||
|  | #else | ||||||
|  |   return ptr; | ||||||
|  | #endif | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim)  | ||||||
|  | { | ||||||
|  |   assert(ncache>0); | ||||||
|  | #ifdef GRID_OMP | ||||||
|  |   assert(omp_in_parallel()==0); | ||||||
|  | #endif  | ||||||
|  |  | ||||||
|  |   void * ret = NULL; | ||||||
|  |   int v = -1; | ||||||
|  |  | ||||||
|  |   for(int e=0;e<ncache;e++) { | ||||||
|  |     if ( entries[e].valid==0 ) { | ||||||
|  |       v=e;  | ||||||
|  |       break; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if ( v==-1 ) { | ||||||
|  |     v=victim; | ||||||
|  |     victim = (victim+1)%ncache; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if ( entries[v].valid ) { | ||||||
|  |     ret = entries[v].address; | ||||||
|  |     entries[v].valid = 0; | ||||||
|  |     entries[v].address = NULL; | ||||||
|  |     entries[v].bytes = 0; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   entries[v].address=ptr; | ||||||
|  |   entries[v].bytes  =bytes; | ||||||
|  |   entries[v].valid  =1; | ||||||
|  |  | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Lookup(size_t bytes,int type) | ||||||
|  | { | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   bool small = (bytes < GRID_ALLOC_SMALL_LIMIT); | ||||||
|  |   int cache = type+small; | ||||||
|  |   return Lookup(bytes,Entries[cache],Ncache[cache]); | ||||||
|  | #else | ||||||
|  |   return NULL; | ||||||
|  | #endif | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache)  | ||||||
|  | { | ||||||
|  |   assert(ncache>0); | ||||||
|  | #ifdef GRID_OMP | ||||||
|  |   assert(omp_in_parallel()==0); | ||||||
|  | #endif  | ||||||
|  |   for(int e=0;e<ncache;e++){ | ||||||
|  |     if ( entries[e].valid && ( entries[e].bytes == bytes ) ) { | ||||||
|  |       entries[e].valid = 0; | ||||||
|  |       return entries[e].address; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   return NULL; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
							
								
								
									
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							| @@ -0,0 +1,180 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/MemoryManager.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  | #include <list>  | ||||||
|  | #include <unordered_map>   | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | // Move control to configure.ac and Config.h? | ||||||
|  |  | ||||||
|  | #define GRID_ALLOC_SMALL_LIMIT (4096) | ||||||
|  |  | ||||||
|  | /*Pinning pages is costly*/ | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Advise the LatticeAccelerator class | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | enum ViewAdvise { | ||||||
|  |  AdviseDefault       = 0x0,    // Regular data | ||||||
|  |  AdviseInfrequentUse = 0x1     // Advise that the data is used infrequently.  This can | ||||||
|  |                                // significantly influence performance of bulk storage. | ||||||
|  |   | ||||||
|  |  // AdviseTransient      = 0x2,   // Data will mostly be read.  On some architectures | ||||||
|  |                                // enables read-only copies of memory to be kept on | ||||||
|  |                                // host and device. | ||||||
|  |  | ||||||
|  |  // AdviseAcceleratorWriteDiscard = 0x4  // Field will be written in entirety on device | ||||||
|  |  | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View Access Mode | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | enum ViewMode { | ||||||
|  |   AcceleratorRead  = 0x01, | ||||||
|  |   AcceleratorWrite = 0x02, | ||||||
|  |   AcceleratorWriteDiscard = 0x04, | ||||||
|  |   CpuRead  = 0x08, | ||||||
|  |   CpuWrite = 0x10, | ||||||
|  |   CpuWriteDiscard = 0x10 // same for now | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | class MemoryManager { | ||||||
|  | private: | ||||||
|  |  | ||||||
|  |   //////////////////////////////////////////////////////////// | ||||||
|  |   // For caching recently freed allocations | ||||||
|  |   //////////////////////////////////////////////////////////// | ||||||
|  |   typedef struct {  | ||||||
|  |     void *address; | ||||||
|  |     size_t bytes; | ||||||
|  |     int valid; | ||||||
|  |   } AllocationCacheEntry; | ||||||
|  |  | ||||||
|  |   static const int NallocCacheMax=128;  | ||||||
|  |   static const int NallocType=6; | ||||||
|  |   static AllocationCacheEntry Entries[NallocType][NallocCacheMax]; | ||||||
|  |   static int Victim[NallocType]; | ||||||
|  |   static int Ncache[NallocType]; | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   // Free pool | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   static void *Insert(void *ptr,size_t bytes,int type) ; | ||||||
|  |   static void *Lookup(size_t bytes,int type) ; | ||||||
|  |   static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim) ; | ||||||
|  |   static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache) ; | ||||||
|  |  | ||||||
|  |   static void PrintBytes(void); | ||||||
|  |  public: | ||||||
|  |   static void Init(void); | ||||||
|  |   static void InitMessage(void); | ||||||
|  |   static void *AcceleratorAllocate(size_t bytes); | ||||||
|  |   static void  AcceleratorFree    (void *ptr,size_t bytes); | ||||||
|  |   static void *SharedAllocate(size_t bytes); | ||||||
|  |   static void  SharedFree    (void *ptr,size_t bytes); | ||||||
|  |   static void *CpuAllocate(size_t bytes); | ||||||
|  |   static void  CpuFree    (void *ptr,size_t bytes); | ||||||
|  |  | ||||||
|  |   //////////////////////////////////////////////////////// | ||||||
|  |   // Footprint tracking | ||||||
|  |   //////////////////////////////////////////////////////// | ||||||
|  |   static uint64_t     DeviceBytes; | ||||||
|  |   static uint64_t     DeviceLRUBytes; | ||||||
|  |   static uint64_t     DeviceMaxBytes; | ||||||
|  |   static uint64_t     HostToDeviceBytes; | ||||||
|  |   static uint64_t     DeviceToHostBytes; | ||||||
|  |   static uint64_t     HostToDeviceXfer; | ||||||
|  |   static uint64_t     DeviceToHostXfer; | ||||||
|  |   | ||||||
|  |  private: | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |   ////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Data tables for ViewCache | ||||||
|  |   ////////////////////////////////////////////////////////////////////// | ||||||
|  |   typedef std::list<uint64_t> LRU_t; | ||||||
|  |   typedef typename LRU_t::iterator LRUiterator; | ||||||
|  |   typedef struct {  | ||||||
|  |     int        LRU_valid; | ||||||
|  |     LRUiterator LRU_entry; | ||||||
|  |     uint64_t CpuPtr; | ||||||
|  |     uint64_t AccPtr; | ||||||
|  |     size_t   bytes; | ||||||
|  |     uint32_t transient; | ||||||
|  |     uint32_t state; | ||||||
|  |     uint32_t accLock; | ||||||
|  |     uint32_t cpuLock; | ||||||
|  |   } AcceleratorViewEntry; | ||||||
|  |    | ||||||
|  |   typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t; | ||||||
|  |   typedef typename AccViewTable_t::iterator AccViewTableIterator ; | ||||||
|  |  | ||||||
|  |   static AccViewTable_t AccViewTable; | ||||||
|  |   static LRU_t LRU; | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   // Device motion | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   static void  Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void  EvictVictims(uint64_t bytes); // Frees up <bytes> | ||||||
|  |   static void  Evict(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  Flush(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  Clone(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  AccDiscard(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  CpuDiscard(AcceleratorViewEntry &AccCache); | ||||||
|  |  | ||||||
|  |   //  static void  LRUupdate(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  LRUinsert(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  LRUremove(AcceleratorViewEntry &AccCache); | ||||||
|  |    | ||||||
|  |   // manage entries in the table | ||||||
|  |   static int                  EntryPresent(uint64_t CpuPtr); | ||||||
|  |   static void                 EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void                 EntryErase (uint64_t CpuPtr); | ||||||
|  |   static AccViewTableIterator EntryLookup(uint64_t CpuPtr); | ||||||
|  |   static void                 EntrySet   (uint64_t CpuPtr,AcceleratorViewEntry &entry); | ||||||
|  |  | ||||||
|  |   static void     AcceleratorViewClose(uint64_t AccPtr); | ||||||
|  |   static uint64_t AcceleratorViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void     CpuViewClose(uint64_t Ptr); | ||||||
|  |   static uint64_t CpuViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  | #endif | ||||||
|  |   static void NotifyDeletion(void * CpuPtr); | ||||||
|  |  | ||||||
|  |  public: | ||||||
|  |   static void Print(void); | ||||||
|  |   static int   isOpen   (void* CpuPtr); | ||||||
|  |   static void  ViewClose(void* CpuPtr,ViewMode mode); | ||||||
|  |   static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |  | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
							
								
								
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,478 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |  | ||||||
|  | #warning "Using explicit device memory copies" | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | //define dprintf(...) printf ( __VA_ARGS__ ); fflush(stdout); | ||||||
|  | #define dprintf(...) | ||||||
|  |  | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////// | ||||||
|  | // For caching copies of data on device | ||||||
|  | //////////////////////////////////////////////////////////// | ||||||
|  | MemoryManager::AccViewTable_t MemoryManager::AccViewTable; | ||||||
|  | MemoryManager::LRU_t MemoryManager::LRU; | ||||||
|  |    | ||||||
|  | //////////////////////////////////////////////////////// | ||||||
|  | // Footprint tracking | ||||||
|  | //////////////////////////////////////////////////////// | ||||||
|  | uint64_t  MemoryManager::DeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceLRUBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostBytes; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceXfer; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostXfer; | ||||||
|  |  | ||||||
|  | //////////////////////////////////// | ||||||
|  | // Priority ordering for unlocked entries | ||||||
|  | //  Empty | ||||||
|  | //  CpuDirty  | ||||||
|  | //  Consistent | ||||||
|  | //  AccDirty | ||||||
|  | //////////////////////////////////// | ||||||
|  | #define Empty         (0x0)  /*Entry unoccupied  */ | ||||||
|  | #define CpuDirty      (0x1)  /*CPU copy is golden, Acc buffer MAY not be allocated*/ | ||||||
|  | #define Consistent    (0x2)  /*ACC copy AND CPU copy are valid */ | ||||||
|  | #define AccDirty      (0x4)  /*ACC copy is golden */ | ||||||
|  | #define EvictNext     (0x8)  /*Priority for eviction*/ | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | // Mechanics of data table maintenance | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | int   MemoryManager::EntryPresent(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   if(AccViewTable.empty()) return 0; | ||||||
|  |  | ||||||
|  |   auto count = AccViewTable.count(CpuPtr);  assert((count==0)||(count==1)); | ||||||
|  |   return count; | ||||||
|  | } | ||||||
|  | void  MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   assert(!EntryPresent(CpuPtr)); | ||||||
|  |   AcceleratorViewEntry AccCache; | ||||||
|  |   AccCache.CpuPtr = CpuPtr; | ||||||
|  |   AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |   AccCache.bytes  = bytes; | ||||||
|  |   AccCache.state  = CpuDirty; | ||||||
|  |   AccCache.LRU_valid=0; | ||||||
|  |   AccCache.transient=0; | ||||||
|  |   AccCache.accLock=0; | ||||||
|  |   AccCache.cpuLock=0; | ||||||
|  |   AccViewTable[CpuPtr] = AccCache; | ||||||
|  | } | ||||||
|  | MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   assert(EntryPresent(CpuPtr)); | ||||||
|  |   auto AccCacheIterator = AccViewTable.find(CpuPtr); | ||||||
|  |   assert(AccCacheIterator!=AccViewTable.end()); | ||||||
|  |   return AccCacheIterator; | ||||||
|  | } | ||||||
|  | void MemoryManager::EntryErase(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCache = EntryLookup(CpuPtr); | ||||||
|  |   AccViewTable.erase(CpuPtr); | ||||||
|  | } | ||||||
|  | void  MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.LRU_valid==0); | ||||||
|  |   if (AccCache.transient) {  | ||||||
|  |     LRU.push_back(AccCache.CpuPtr); | ||||||
|  |     AccCache.LRU_entry = --LRU.end(); | ||||||
|  |   } else { | ||||||
|  |     LRU.push_front(AccCache.CpuPtr); | ||||||
|  |     AccCache.LRU_entry = LRU.begin(); | ||||||
|  |   } | ||||||
|  |   AccCache.LRU_valid = 1; | ||||||
|  |   DeviceLRUBytes+=AccCache.bytes; | ||||||
|  | } | ||||||
|  | void  MemoryManager::LRUremove(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.LRU_valid==1); | ||||||
|  |   LRU.erase(AccCache.LRU_entry); | ||||||
|  |   AccCache.LRU_valid = 0; | ||||||
|  |   DeviceLRUBytes-=AccCache.bytes; | ||||||
|  | } | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | // Accelerator cache motion & consistency logic | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   /////////////////////////////////////////////////////////// | ||||||
|  |   // Remove from Accelerator, remove entry, without flush | ||||||
|  |   // Cannot be locked. If allocated Must be in LRU pool. | ||||||
|  |   /////////////////////////////////////////////////////////// | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |    | ||||||
|  |    dprintf("MemoryManager: Discard(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr) { | ||||||
|  |     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |     DeviceBytes   -=AccCache.bytes; | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |     dprintf("MemoryManager: Free(%llx) LRU %lld Total %lld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);   | ||||||
|  |   } | ||||||
|  |   uint64_t CpuPtr = AccCache.CpuPtr; | ||||||
|  |   EntryErase(CpuPtr); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::Evict(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   /////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Make CPU consistent, remove from Accelerator, remove entry | ||||||
|  |   // Cannot be locked. If allocated must be in LRU pool. | ||||||
|  |   /////////////////////////////////////////////////////////////////////////// | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |    | ||||||
|  |   dprintf("MemoryManager: Evict(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   if(AccCache.state==AccDirty) { | ||||||
|  |     Flush(AccCache); | ||||||
|  |   } | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr) { | ||||||
|  |     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |     DeviceBytes   -=AccCache.bytes; | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |     dprintf("MemoryManager: Free(%llx) footprint now %lld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);   | ||||||
|  |   } | ||||||
|  |   uint64_t CpuPtr = AccCache.CpuPtr; | ||||||
|  |   EntryErase(CpuPtr); | ||||||
|  | } | ||||||
|  | void MemoryManager::Flush(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state==AccDirty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.AccPtr!=(uint64_t)NULL); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes); | ||||||
|  |   dprintf("MemoryManager: Flush  %llx -> %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||||
|  |   DeviceToHostBytes+=AccCache.bytes; | ||||||
|  |   DeviceToHostXfer++; | ||||||
|  |   AccCache.state=Consistent; | ||||||
|  | } | ||||||
|  | void MemoryManager::Clone(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state==CpuDirty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||||
|  |     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||||
|  |     DeviceBytes+=AccCache.bytes; | ||||||
|  |   } | ||||||
|  |   dprintf("MemoryManager: Clone %llx <- %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||||
|  |   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |   HostToDeviceBytes+=AccCache.bytes; | ||||||
|  |   HostToDeviceXfer++; | ||||||
|  |   AccCache.state=Consistent; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||||
|  |     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||||
|  |     DeviceBytes+=AccCache.bytes; | ||||||
|  |   } | ||||||
|  |   AccCache.state=AccDirty; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View management | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | void MemoryManager::ViewClose(void* Ptr,ViewMode mode) | ||||||
|  | { | ||||||
|  |   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||||
|  |     AcceleratorViewClose((uint64_t)Ptr); | ||||||
|  |   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||||
|  |     CpuViewClose((uint64_t)Ptr); | ||||||
|  |   } else {  | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||||
|  |   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||||
|  |     return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint); | ||||||
|  |   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||||
|  |     return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint); | ||||||
|  |   } else {  | ||||||
|  |     assert(0); | ||||||
|  |     return NULL; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void  MemoryManager::EvictVictims(uint64_t bytes) | ||||||
|  | { | ||||||
|  |   while(bytes+DeviceLRUBytes > DeviceMaxBytes){ | ||||||
|  |     if ( DeviceLRUBytes > 0){ | ||||||
|  |       assert(LRU.size()>0); | ||||||
|  |       uint64_t victim = LRU.back(); | ||||||
|  |       auto AccCacheIterator = EntryLookup(victim); | ||||||
|  |       auto & AccCache = AccCacheIterator->second; | ||||||
|  |       Evict(AccCache); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Find if present, otherwise get or force an empty | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   if ( EntryPresent(CpuPtr)==0 ){ | ||||||
|  |     EntryCreate(CpuPtr,bytes,mode,hint); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |   if (!AccCache.AccPtr) { | ||||||
|  |     EvictVictims(bytes);  | ||||||
|  |   }  | ||||||
|  |   assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)); | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock==0);  // Programming error | ||||||
|  |  | ||||||
|  |   if(AccCache.state!=Empty) { | ||||||
|  |     dprintf("ViewOpen found entry %llx %llx : %lld %lld\n", | ||||||
|  | 		    (uint64_t)AccCache.CpuPtr, | ||||||
|  | 		    (uint64_t)CpuPtr, | ||||||
|  | 		    (uint64_t)AccCache.bytes, | ||||||
|  | 		    (uint64_t)bytes); | ||||||
|  |     assert(AccCache.CpuPtr == CpuPtr); | ||||||
|  |     assert(AccCache.bytes  ==bytes); | ||||||
|  |   } | ||||||
|  | /* | ||||||
|  |  *  State transitions and actions | ||||||
|  |  * | ||||||
|  |  *  Action  State   StateNext         Flush    Clone | ||||||
|  |  * | ||||||
|  |  *  AccRead  Empty   Consistent        -        Y | ||||||
|  |  *  AccWrite Empty   AccDirty          -        Y | ||||||
|  |  *  AccRead  CpuDirty Consistent       -        Y | ||||||
|  |  *  AccWrite CpuDirty AccDirty         -        Y | ||||||
|  |  *  AccRead  Consistent Consistent     -        -  | ||||||
|  |  *  AccWrite Consistent AccDirty       -        -  | ||||||
|  |  *  AccRead  AccDirty   AccDirty       -        -  | ||||||
|  |  *  AccWrite AccDirty   AccDirty       -        -  | ||||||
|  |  */ | ||||||
|  |   if(AccCache.state==Empty) { | ||||||
|  |     assert(AccCache.LRU_valid==0); | ||||||
|  |     AccCache.CpuPtr = CpuPtr; | ||||||
|  |     AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |     AccCache.bytes  = bytes; | ||||||
|  |     AccCache.state  = CpuDirty;   // Cpu starts primary | ||||||
|  |     if(mode==AcceleratorWriteDiscard){ | ||||||
|  |       CpuDiscard(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else if(mode==AcceleratorWrite){ | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = Consistent; // Empty + AccRead => Consistent | ||||||
|  |     } | ||||||
|  |     AccCache.accLock= 1; | ||||||
|  |   } else if(AccCache.state==CpuDirty ){ | ||||||
|  |     if(mode==AcceleratorWriteDiscard) { | ||||||
|  |       CpuDiscard(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else if(mode==AcceleratorWrite) { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent | ||||||
|  |     } | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("Copied CpuDirty entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else if(AccCache.state==Consistent) { | ||||||
|  |     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||||
|  |       AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty | ||||||
|  |     else | ||||||
|  |       AccCache.state  = Consistent; // Consistent + AccRead => Consistent | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("Consistent entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else if(AccCache.state==AccDirty) { | ||||||
|  |     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||||
|  |       AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     else | ||||||
|  |       AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("AccDirty entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // If view is opened on device remove from LRU | ||||||
|  |   if(AccCache.LRU_valid==1){ | ||||||
|  |     // must possibly remove from LRU as now locked on GPU | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int transient =hint; | ||||||
|  |   AccCache.transient= transient? EvictNext : 0; | ||||||
|  |  | ||||||
|  |   return AccCache.AccPtr; | ||||||
|  | } | ||||||
|  | //////////////////////////////////// | ||||||
|  | // look up & decrement lock count | ||||||
|  | //////////////////////////////////// | ||||||
|  | void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock>0); | ||||||
|  |  | ||||||
|  |   AccCache.accLock--; | ||||||
|  |  | ||||||
|  |   // Move to LRU queue if not locked and close on device | ||||||
|  |   if(AccCache.accLock==0) { | ||||||
|  |     LRUinsert(AccCache); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void MemoryManager::CpuViewClose(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock>0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |  | ||||||
|  |   AccCache.cpuLock--; | ||||||
|  | } | ||||||
|  | /* | ||||||
|  |  *  Action  State   StateNext         Flush    Clone | ||||||
|  |  * | ||||||
|  |  *  CpuRead  Empty   CpuDirty          -        - | ||||||
|  |  *  CpuWrite Empty   CpuDirty          -        - | ||||||
|  |  *  CpuRead  CpuDirty CpuDirty         -        - | ||||||
|  |  *  CpuWrite CpuDirty CpuDirty         -        -  | ||||||
|  |  *  CpuRead  Consistent Consistent     -        -  | ||||||
|  |  *  CpuWrite Consistent CpuDirty       -        -  | ||||||
|  |  *  CpuRead  AccDirty   Consistent     Y        - | ||||||
|  |  *  CpuWrite AccDirty   CpuDirty       Y        - | ||||||
|  |  */ | ||||||
|  | uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient) | ||||||
|  | { | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Find if present, otherwise get or force an empty | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   if ( EntryPresent(CpuPtr)==0 ){ | ||||||
|  |     EntryCreate(CpuPtr,bytes,mode,transient); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   if (!AccCache.AccPtr) { | ||||||
|  |      EvictVictims(bytes); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   assert((mode==CpuRead)||(mode==CpuWrite)); | ||||||
|  |   assert(AccCache.accLock==0);  // Programming error | ||||||
|  |  | ||||||
|  |   if(AccCache.state!=Empty) { | ||||||
|  |     assert(AccCache.CpuPtr == CpuPtr); | ||||||
|  |     assert(AccCache.bytes==bytes); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if(AccCache.state==Empty) { | ||||||
|  |     AccCache.CpuPtr = CpuPtr; | ||||||
|  |     AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |     AccCache.bytes  = bytes; | ||||||
|  |     AccCache.state  = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty | ||||||
|  |     AccCache.accLock= 0; | ||||||
|  |     AccCache.cpuLock= 1; | ||||||
|  |   } else if(AccCache.state==CpuDirty ){ | ||||||
|  |     // AccPtr dont care, deferred allocate | ||||||
|  |     AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else if(AccCache.state==Consistent) { | ||||||
|  |     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||||
|  |     if(mode==CpuWrite) | ||||||
|  |       AccCache.state = CpuDirty;   // Consistent +CpuWrite => CpuDirty | ||||||
|  |     else  | ||||||
|  |       AccCache.state = Consistent; // Consistent +CpuRead  => Consistent | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else if(AccCache.state==AccDirty) { | ||||||
|  |     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||||
|  |     Flush(AccCache); | ||||||
|  |     if(mode==CpuWrite) AccCache.state = CpuDirty;   // AccDirty +CpuWrite => CpuDirty, Flush | ||||||
|  |     else            AccCache.state = Consistent; // AccDirty +CpuRead  => Consistent, Flush | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else { | ||||||
|  |     assert(0); // should be unreachable | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   AccCache.transient= transient? EvictNext : 0; | ||||||
|  |  | ||||||
|  |   return AccCache.CpuPtr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::NotifyDeletion(void *_ptr) | ||||||
|  | { | ||||||
|  |   // Look up in ViewCache | ||||||
|  |   uint64_t ptr = (uint64_t)_ptr; | ||||||
|  |   if(EntryPresent(ptr)) { | ||||||
|  |     auto e = EntryLookup(ptr); | ||||||
|  |     AccDiscard(e->second); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void  MemoryManager::Print(void) | ||||||
|  | { | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "Memory Manager                             " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceBytes   << " bytes allocated on device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceLRUBytes<< " bytes evictable on device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceMaxBytes<< " bytes max on device       " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << HostToDeviceXfer << " transfers        to   device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceToHostXfer << " transfers        from device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << HostToDeviceBytes<< " bytes transfered to   device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceToHostBytes<< " bytes transfered from device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||||
|  |     auto &AccCache = it->second; | ||||||
|  |      | ||||||
|  |     std::string str; | ||||||
|  |     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||||
|  |     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||||
|  |     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||||
|  |     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogDebug << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||||
|  | 	      << "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||||
|  | 	      << "\t" << AccCache.cpuLock | ||||||
|  | 	      << "\t" << AccCache.accLock | ||||||
|  | 	      << "\t" << AccCache.LRU_valid<<std::endl; | ||||||
|  |   } | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |  | ||||||
|  | }; | ||||||
|  | int   MemoryManager::isOpen   (void* _CpuPtr)  | ||||||
|  | {  | ||||||
|  |   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||||
|  |   if ( EntryPresent(CpuPtr) ){ | ||||||
|  |     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |     auto & AccCache = AccCacheIterator->second; | ||||||
|  |     return AccCache.cpuLock+AccCache.accLock; | ||||||
|  |   } else {  | ||||||
|  |     return 0; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,23 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  | #ifdef GRID_UVM | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View management is 1:1 address space mapping | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | uint64_t  MemoryManager::DeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceLRUBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostBytes; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceXfer; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostXfer; | ||||||
|  |  | ||||||
|  | void  MemoryManager::ViewClose(void* AccPtr,ViewMode mode){}; | ||||||
|  | void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; }; | ||||||
|  | int   MemoryManager::isOpen   (void* CpuPtr) { return 0;} | ||||||
|  | void  MemoryManager::Print(void){}; | ||||||
|  | void  MemoryManager::NotifyDeletion(void *ptr){}; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  | #endif | ||||||
| @@ -6,72 +6,6 @@ NAMESPACE_BEGIN(Grid); | |||||||
| MemoryStats *MemoryProfiler::stats = nullptr; | MemoryStats *MemoryProfiler::stats = nullptr; | ||||||
| bool         MemoryProfiler::debug = false; | bool         MemoryProfiler::debug = false; | ||||||
| 
 | 
 | ||||||
| #ifdef GRID_NVCC |  | ||||||
| #define SMALL_LIMIT (0) |  | ||||||
| #else |  | ||||||
| #define SMALL_LIMIT (4096) |  | ||||||
| #endif |  | ||||||
| 
 |  | ||||||
| #ifdef POINTER_CACHE |  | ||||||
| int PointerCache::victim; |  | ||||||
| 
 |  | ||||||
| PointerCache::PointerCacheEntry PointerCache::Entries[PointerCache::Ncache]; |  | ||||||
| 
 |  | ||||||
| void *PointerCache::Insert(void *ptr,size_t bytes) { |  | ||||||
| 
 |  | ||||||
|   if (bytes < SMALL_LIMIT ) return ptr; |  | ||||||
| 
 |  | ||||||
| #ifdef GRID_OMP |  | ||||||
|   assert(omp_in_parallel()==0); |  | ||||||
| #endif  |  | ||||||
| 
 |  | ||||||
|   void * ret = NULL; |  | ||||||
|   int v = -1; |  | ||||||
| 
 |  | ||||||
|   for(int e=0;e<Ncache;e++) { |  | ||||||
|     if ( Entries[e].valid==0 ) { |  | ||||||
|       v=e;  |  | ||||||
|       break; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   if ( v==-1 ) { |  | ||||||
|     v=victim; |  | ||||||
|     victim = (victim+1)%Ncache; |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   if ( Entries[v].valid ) { |  | ||||||
|     ret = Entries[v].address; |  | ||||||
|     Entries[v].valid = 0; |  | ||||||
|     Entries[v].address = NULL; |  | ||||||
|     Entries[v].bytes = 0; |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   Entries[v].address=ptr; |  | ||||||
|   Entries[v].bytes  =bytes; |  | ||||||
|   Entries[v].valid  =1; |  | ||||||
| 
 |  | ||||||
|   return ret; |  | ||||||
| } |  | ||||||
| 
 |  | ||||||
| void *PointerCache::Lookup(size_t bytes) { |  | ||||||
| 
 |  | ||||||
|   if (bytes < SMALL_LIMIT ) return NULL; |  | ||||||
| 
 |  | ||||||
| #ifdef GRID_OMP |  | ||||||
|   assert(omp_in_parallel()==0); |  | ||||||
| #endif  |  | ||||||
| 
 |  | ||||||
|   for(int e=0;e<Ncache;e++){ |  | ||||||
|     if ( Entries[e].valid && ( Entries[e].bytes == bytes ) ) { |  | ||||||
|       Entries[e].valid = 0; |  | ||||||
|       return Entries[e].address; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|   return NULL; |  | ||||||
| } |  | ||||||
| #endif |  | ||||||
| 
 |  | ||||||
| void check_huge_pages(void *Buf,uint64_t BYTES) | void check_huge_pages(void *Buf,uint64_t BYTES) | ||||||
| { | { | ||||||
| #ifdef __linux__ | #ifdef __linux__ | ||||||
							
								
								
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,95 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/MemoryStats.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | std::string sizeString(size_t bytes); | ||||||
|  |  | ||||||
|  | struct MemoryStats | ||||||
|  | { | ||||||
|  |   size_t totalAllocated{0}, maxAllocated{0},  | ||||||
|  |     currentlyAllocated{0}, totalFreed{0}; | ||||||
|  | }; | ||||||
|  |      | ||||||
|  | class MemoryProfiler | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   static MemoryStats *stats; | ||||||
|  |   static bool        debug; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" | ||||||
|  | #define profilerDebugPrint						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | #define profilerAllocate(bytes)						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       s->totalAllocated     += (bytes);					\ | ||||||
|  |       s->currentlyAllocated += (bytes);					\ | ||||||
|  |       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ | ||||||
|  |     }									\ | ||||||
|  |   if (MemoryProfiler::debug)						\ | ||||||
|  |     {									\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ | ||||||
|  |       profilerDebugPrint;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | #define profilerFree(bytes)						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       s->totalFreed         += (bytes);					\ | ||||||
|  |       s->currentlyAllocated -= (bytes);					\ | ||||||
|  |     }									\ | ||||||
|  |   if (MemoryProfiler::debug)						\ | ||||||
|  |     {									\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ | ||||||
|  |       profilerDebugPrint;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | void check_huge_pages(void *Buf,uint64_t BYTES); | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| @@ -81,6 +81,7 @@ public: | |||||||
|  |  | ||||||
|   bool _isCheckerBoarded;  |   bool _isCheckerBoarded;  | ||||||
|   int        LocallyPeriodic; |   int        LocallyPeriodic; | ||||||
|  |   Coordinate _checker_dim_mask; | ||||||
|  |  | ||||||
| public: | public: | ||||||
|  |  | ||||||
|   | |||||||
| @@ -38,6 +38,7 @@ class GridCartesian: public GridBase { | |||||||
|  |  | ||||||
| public: | public: | ||||||
|   int dummy; |   int dummy; | ||||||
|  |   Coordinate _checker_dim_mask; | ||||||
|   virtual int  CheckerBoardFromOindexTable (int Oindex) { |   virtual int  CheckerBoardFromOindexTable (int Oindex) { | ||||||
|     return 0; |     return 0; | ||||||
|   } |   } | ||||||
| @@ -104,6 +105,7 @@ public: | |||||||
|     _ldimensions.resize(_ndimension); |     _ldimensions.resize(_ndimension); | ||||||
|     _rdimensions.resize(_ndimension); |     _rdimensions.resize(_ndimension); | ||||||
|     _simd_layout.resize(_ndimension); |     _simd_layout.resize(_ndimension); | ||||||
|  |     _checker_dim_mask.resize(_ndimension);; | ||||||
|     _lstart.resize(_ndimension); |     _lstart.resize(_ndimension); | ||||||
|     _lend.resize(_ndimension); |     _lend.resize(_ndimension); | ||||||
|  |  | ||||||
| @@ -114,6 +116,8 @@ public: | |||||||
|  |  | ||||||
|     for (int d = 0; d < _ndimension; d++) |     for (int d = 0; d < _ndimension; d++) | ||||||
|       { |       { | ||||||
|  | 	_checker_dim_mask[d]=0; | ||||||
|  |  | ||||||
|         _fdimensions[d] = dimensions[d];   // Global dimensions |         _fdimensions[d] = dimensions[d];   // Global dimensions | ||||||
|         _gdimensions[d] = _fdimensions[d]; // Global dimensions |         _gdimensions[d] = _fdimensions[d]; // Global dimensions | ||||||
|         _simd_layout[d] = simd_layout[d]; |         _simd_layout[d] = simd_layout[d]; | ||||||
|   | |||||||
| @@ -36,11 +36,27 @@ static const int CbBlack=1; | |||||||
| static const int Even   =CbRed; | static const int Even   =CbRed; | ||||||
| static const int Odd    =CbBlack; | static const int Odd    =CbBlack; | ||||||
|  |  | ||||||
|  | accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex,const Coordinate &rdim,const Coordinate &chk_dim_msk) | ||||||
|  | { | ||||||
|  |   int nd=rdim.size(); | ||||||
|  |   Coordinate coor(nd); | ||||||
|  |  | ||||||
|  |   Lexicographic::CoorFromIndex(coor,oindex,rdim); | ||||||
|  |  | ||||||
|  |   int linear=0; | ||||||
|  |   for(int d=0;d<nd;d++){ | ||||||
|  |     if(chk_dim_msk[d]) | ||||||
|  |       linear=linear+coor[d]; | ||||||
|  |   } | ||||||
|  |   return (linear&0x1); | ||||||
|  | } | ||||||
|  |  | ||||||
|  |      | ||||||
| // Specialise this for red black grids storing half the data like a chess board. | // Specialise this for red black grids storing half the data like a chess board. | ||||||
| class GridRedBlackCartesian : public GridBase | class GridRedBlackCartesian : public GridBase | ||||||
| { | { | ||||||
| public: | public: | ||||||
|   Coordinate _checker_dim_mask; |   //  Coordinate _checker_dim_mask; | ||||||
|   int              _checker_dim; |   int              _checker_dim; | ||||||
|   std::vector<int> _checker_board; |   std::vector<int> _checker_board; | ||||||
|  |  | ||||||
|   | |||||||
| @@ -33,6 +33,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | bool Stencil_force_mpi = true; | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////// | ||||||
| // Info that is setup once and indept of cartesian layout | // Info that is setup once and indept of cartesian layout | ||||||
| /////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////// | ||||||
|   | |||||||
| @@ -1,4 +1,3 @@ | |||||||
|  |  | ||||||
| /************************************************************************************* | /************************************************************************************* | ||||||
|  |  | ||||||
|     Grid physics library, www.github.com/paboyle/Grid  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
| @@ -36,6 +35,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | extern bool Stencil_force_mpi ; | ||||||
|  |  | ||||||
| class CartesianCommunicator : public SharedMemory { | class CartesianCommunicator : public SharedMemory { | ||||||
|  |  | ||||||
| public:     | public:     | ||||||
| @@ -108,12 +109,15 @@ public: | |||||||
|   //////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////// | ||||||
|   // Reduction |   // Reduction | ||||||
|   //////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////// | ||||||
|  |   void GlobalMax(RealD &); | ||||||
|  |   void GlobalMax(RealF &); | ||||||
|   void GlobalSum(RealF &); |   void GlobalSum(RealF &); | ||||||
|   void GlobalSumVector(RealF *,int N); |   void GlobalSumVector(RealF *,int N); | ||||||
|   void GlobalSum(RealD &); |   void GlobalSum(RealD &); | ||||||
|   void GlobalSumVector(RealD *,int N); |   void GlobalSumVector(RealD *,int N); | ||||||
|   void GlobalSum(uint32_t &); |   void GlobalSum(uint32_t &); | ||||||
|   void GlobalSum(uint64_t &); |   void GlobalSum(uint64_t &); | ||||||
|  |   void GlobalSumVector(uint64_t*,int N); | ||||||
|   void GlobalSum(ComplexF &c); |   void GlobalSum(ComplexF &c); | ||||||
|   void GlobalSumVector(ComplexF *c,int N); |   void GlobalSumVector(ComplexF *c,int N); | ||||||
|   void GlobalSum(ComplexD &c); |   void GlobalSum(ComplexD &c); | ||||||
| @@ -137,21 +141,6 @@ public: | |||||||
| 		      int recv_from_rank, | 		      int recv_from_rank, | ||||||
| 		      int bytes); | 		      int bytes); | ||||||
|    |    | ||||||
|   void SendRecvPacket(void *xmit, |  | ||||||
| 		      void *recv, |  | ||||||
| 		      int xmit_to_rank, |  | ||||||
| 		      int recv_from_rank, |  | ||||||
| 		      int bytes); |  | ||||||
|    |  | ||||||
|   void SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 			   void *xmit, |  | ||||||
| 			   int xmit_to_rank, |  | ||||||
| 			   void *recv, |  | ||||||
| 			   int recv_from_rank, |  | ||||||
| 			   int bytes); |  | ||||||
|    |  | ||||||
|   void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall); |  | ||||||
|  |  | ||||||
|   double StencilSendToRecvFrom(void *xmit, |   double StencilSendToRecvFrom(void *xmit, | ||||||
| 			       int xmit_to_rank, | 			       int xmit_to_rank, | ||||||
| 			       void *recv, | 			       void *recv, | ||||||
|   | |||||||
| @@ -43,8 +43,16 @@ void CartesianCommunicator::Init(int *argc, char ***argv) | |||||||
|  |  | ||||||
|   MPI_Initialized(&flag); // needed to coexist with other libs apparently |   MPI_Initialized(&flag); // needed to coexist with other libs apparently | ||||||
|   if ( !flag ) { |   if ( !flag ) { | ||||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); |  | ||||||
|  |  | ||||||
|  | #ifndef GRID_COMMS_THREADS | ||||||
|  |     nCommThreads=1; | ||||||
|  |     // wrong results here too | ||||||
|  |     // For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs | ||||||
|  |     // other comms schemes are ok | ||||||
|  |     MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided); | ||||||
|  | #else | ||||||
|  |     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); | ||||||
|  | #endif | ||||||
|     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE |     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE | ||||||
|     if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) { |     if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) { | ||||||
|       assert(0); |       assert(0); | ||||||
| @@ -255,6 +263,10 @@ void CartesianCommunicator::GlobalSum(uint64_t &u){ | |||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| } | } | ||||||
|  | void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){ | ||||||
|  |   int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator); | ||||||
|  |   assert(ierr==0); | ||||||
|  | } | ||||||
| void CartesianCommunicator::GlobalXOR(uint32_t &u){ | void CartesianCommunicator::GlobalXOR(uint32_t &u){ | ||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| @@ -263,6 +275,16 @@ void CartesianCommunicator::GlobalXOR(uint64_t &u){ | |||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_BXOR,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_BXOR,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| } | } | ||||||
|  | void CartesianCommunicator::GlobalMax(float &f) | ||||||
|  | { | ||||||
|  |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_MAX,communicator); | ||||||
|  |   assert(ierr==0); | ||||||
|  | } | ||||||
|  | void CartesianCommunicator::GlobalMax(double &d) | ||||||
|  | { | ||||||
|  |   int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_MAX,communicator); | ||||||
|  |   assert(ierr==0); | ||||||
|  | } | ||||||
| void CartesianCommunicator::GlobalSum(float &f){ | void CartesianCommunicator::GlobalSum(float &f){ | ||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| @@ -290,60 +312,28 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | |||||||
| 					   int bytes) | 					   int bytes) | ||||||
| { | { | ||||||
|   std::vector<CommsRequest_t> reqs(0); |   std::vector<CommsRequest_t> reqs(0); | ||||||
|   //    unsigned long  xcrc = crc32(0L, Z_NULL, 0); |   unsigned long  xcrc = crc32(0L, Z_NULL, 0); | ||||||
|   //    unsigned long  rcrc = crc32(0L, Z_NULL, 0); |   unsigned long  rcrc = crc32(0L, Z_NULL, 0); | ||||||
|   //    xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); |  | ||||||
|   SendToRecvFromBegin(reqs,xmit,dest,recv,from,bytes); |  | ||||||
|   SendToRecvFromComplete(reqs); |  | ||||||
|   //    rcrc = crc32(rcrc,(unsigned char *)recv,bytes); |  | ||||||
|   //    printf("proc %d SendToRecvFrom %d bytes %lx %lx\n",_processor,bytes,xcrc,rcrc); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, |  | ||||||
| 					   void *recv, |  | ||||||
| 					   int sender, |  | ||||||
| 					   int receiver, |  | ||||||
| 					   int bytes) |  | ||||||
| { |  | ||||||
|   MPI_Status stat; |  | ||||||
|   assert(sender != receiver); |  | ||||||
|   int tag = sender; |  | ||||||
|   if ( _processor == sender ) { |  | ||||||
|     MPI_Send(xmit, bytes, MPI_CHAR,receiver,tag,communicator); |  | ||||||
|   } |  | ||||||
|   if ( _processor == receiver ) {  |  | ||||||
|     MPI_Recv(recv, bytes, MPI_CHAR,sender,tag,communicator,&stat); |  | ||||||
|   } |  | ||||||
| } |  | ||||||
| // Basic Halo comms primitive |  | ||||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 						void *xmit, |  | ||||||
| 						int dest, |  | ||||||
| 						void *recv, |  | ||||||
| 						int from, |  | ||||||
| 						int bytes) |  | ||||||
| { |  | ||||||
|   int myrank = _processor; |   int myrank = _processor; | ||||||
|   int ierr; |   int ierr; | ||||||
|  |  | ||||||
|   if ( CommunicatorPolicy == CommunicatorPolicyConcurrent ) {  |   // Enforce no UVM in comms, device or host OK | ||||||
|     MPI_Request xrq; |   assert(acceleratorIsCommunicable(xmit)); | ||||||
|     MPI_Request rrq; |   assert(acceleratorIsCommunicable(recv)); | ||||||
|  |  | ||||||
|     ierr =MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator,&rrq); |   // Give the CPU to MPI immediately; can use threads to overlap optionally | ||||||
|     ierr|=MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator,&xrq); |   //  printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes); | ||||||
|  |   ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, | ||||||
|  | 		    recv,bytes,MPI_CHAR,from, from, | ||||||
|  | 		    communicator,MPI_STATUS_IGNORE); | ||||||
|  |   assert(ierr==0); | ||||||
|  |  | ||||||
|     assert(ierr==0); |   //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); | ||||||
|     list.push_back(xrq); |   //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes); | ||||||
|     list.push_back(rrq); |   //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush | ||||||
|   } else {  |  | ||||||
|     // Give the CPU to MPI immediately; can use threads to overlap optionally |  | ||||||
|     ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, |  | ||||||
| 		      recv,bytes,MPI_CHAR,from, from, |  | ||||||
| 		      communicator,MPI_STATUS_IGNORE); |  | ||||||
|     assert(ierr==0); |  | ||||||
|   } |  | ||||||
| } | } | ||||||
|  | // Basic Halo comms primitive | ||||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||||
| 						     int dest, | 						     int dest, | ||||||
| 						     void *recv, | 						     void *recv, | ||||||
| @@ -378,19 +368,28 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
|   assert(from != _processor); |   assert(from != _processor); | ||||||
|   assert(gme  == ShmRank); |   assert(gme  == ShmRank); | ||||||
|   double off_node_bytes=0.0; |   double off_node_bytes=0.0; | ||||||
|  |   int tag; | ||||||
|  |  | ||||||
|   if ( gfrom ==MPI_UNDEFINED) { |   if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||||
|     ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator_halo[commdir],&rrq); |     tag= dir+from*32; | ||||||
|  |     ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq); | ||||||
|     assert(ierr==0); |     assert(ierr==0); | ||||||
|     list.push_back(rrq); |     list.push_back(rrq); | ||||||
|     off_node_bytes+=bytes; |     off_node_bytes+=bytes; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   if ( gdest == MPI_UNDEFINED ) { |   if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||||
|     ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator_halo[commdir],&xrq); |     tag= dir+_processor*32; | ||||||
|  |     ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||||
|     assert(ierr==0); |     assert(ierr==0); | ||||||
|     list.push_back(xrq); |     list.push_back(xrq); | ||||||
|     off_node_bytes+=bytes; |     off_node_bytes+=bytes; | ||||||
|  |   } else { | ||||||
|  |     // TODO : make a OMP loop on CPU, call threaded bcopy | ||||||
|  |     void *shm = (void *) this->ShmBufferTranslate(dest,recv); | ||||||
|  |     assert(shm!=NULL); | ||||||
|  |     acceleratorCopyDeviceToDeviceAsynch(xmit,shm,bytes); | ||||||
|  |     acceleratorCopySynchronise(); // MPI prob slower | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   if ( CommunicatorPolicy == CommunicatorPolicySequential ) { |   if ( CommunicatorPolicy == CommunicatorPolicySequential ) { | ||||||
| @@ -399,15 +398,7 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
|  |  | ||||||
|   return off_node_bytes; |   return off_node_bytes; | ||||||
| } | } | ||||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir) | ||||||
| { |  | ||||||
|   SendToRecvFromComplete(waitall); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::StencilBarrier(void) |  | ||||||
| { |  | ||||||
|   MPI_Barrier  (ShmComm); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) |  | ||||||
| { | { | ||||||
|   int nreq=list.size(); |   int nreq=list.size(); | ||||||
|  |  | ||||||
| @@ -418,6 +409,13 @@ void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> & | |||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
|   list.resize(0); |   list.resize(0); | ||||||
| } | } | ||||||
|  | void CartesianCommunicator::StencilBarrier(void) | ||||||
|  | { | ||||||
|  |   MPI_Barrier  (ShmComm); | ||||||
|  | } | ||||||
|  | //void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||||
|  | //{ | ||||||
|  | //} | ||||||
| void CartesianCommunicator::Barrier(void) | void CartesianCommunicator::Barrier(void) | ||||||
| { | { | ||||||
|   int ierr = MPI_Barrier(communicator); |   int ierr = MPI_Barrier(communicator); | ||||||
| @@ -479,5 +477,3 @@ void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t | |||||||
| } | } | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -67,24 +67,18 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | |||||||
|  |  | ||||||
| CartesianCommunicator::~CartesianCommunicator(){} | CartesianCommunicator::~CartesianCommunicator(){} | ||||||
|  |  | ||||||
|  | void CartesianCommunicator::GlobalMax(float &){} | ||||||
|  | void CartesianCommunicator::GlobalMax(double &){} | ||||||
| void CartesianCommunicator::GlobalSum(float &){} | void CartesianCommunicator::GlobalSum(float &){} | ||||||
| void CartesianCommunicator::GlobalSumVector(float *,int N){} | void CartesianCommunicator::GlobalSumVector(float *,int N){} | ||||||
| void CartesianCommunicator::GlobalSum(double &){} | void CartesianCommunicator::GlobalSum(double &){} | ||||||
|  | void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||||
| void CartesianCommunicator::GlobalSum(uint32_t &){} | void CartesianCommunicator::GlobalSum(uint32_t &){} | ||||||
| void CartesianCommunicator::GlobalSum(uint64_t &){} | void CartesianCommunicator::GlobalSum(uint64_t &){} | ||||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){} | ||||||
| void CartesianCommunicator::GlobalXOR(uint32_t &){} | void CartesianCommunicator::GlobalXOR(uint32_t &){} | ||||||
| void CartesianCommunicator::GlobalXOR(uint64_t &){} | void CartesianCommunicator::GlobalXOR(uint64_t &){} | ||||||
|  |  | ||||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, |  | ||||||
| 					   void *recv, |  | ||||||
| 					   int xmit_to_rank, |  | ||||||
| 					   int recv_from_rank, |  | ||||||
| 					   int bytes) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
|  |  | ||||||
|  |  | ||||||
| // Basic Halo comms primitive -- should never call in single node | // Basic Halo comms primitive -- should never call in single node | ||||||
| void CartesianCommunicator::SendToRecvFrom(void *xmit, | void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||||
| @@ -95,20 +89,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | |||||||
| { | { | ||||||
|   assert(0); |   assert(0); | ||||||
| } | } | ||||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 						void *xmit, |  | ||||||
| 						int dest, |  | ||||||
| 						void *recv, |  | ||||||
| 						int from, |  | ||||||
| 						int bytes) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||||
| { | { | ||||||
|   bcopy(in,out,bytes*words); |   bcopy(in,out,bytes*words); | ||||||
| @@ -136,10 +116,6 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | |||||||
| 						     int recv_from_rank, | 						     int recv_from_rank, | ||||||
| 						     int bytes, int dir) | 						     int bytes, int dir) | ||||||
| { | { | ||||||
|   std::vector<CommsRequest_t> list; |  | ||||||
|   // Discard the "dir" |  | ||||||
|   SendToRecvFromBegin   (list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); |  | ||||||
|   SendToRecvFromComplete(list); |  | ||||||
|   return 2.0*bytes; |   return 2.0*bytes; | ||||||
| } | } | ||||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||||
| @@ -149,13 +125,10 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
| 							 int recv_from_rank, | 							 int recv_from_rank, | ||||||
| 							 int bytes, int dir) | 							 int bytes, int dir) | ||||||
| { | { | ||||||
|   // Discard the "dir" |  | ||||||
|   SendToRecvFromBegin(list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); |  | ||||||
|   return 2.0*bytes; |   return 2.0*bytes; | ||||||
| } | } | ||||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | ||||||
| { | { | ||||||
|   SendToRecvFromComplete(waitall); |  | ||||||
| } | } | ||||||
|  |  | ||||||
| void CartesianCommunicator::StencilBarrier(void){}; | void CartesianCommunicator::StencilBarrier(void){}; | ||||||
|   | |||||||
| @@ -74,7 +74,9 @@ void *SharedMemory::ShmBufferMalloc(size_t bytes){ | |||||||
|   if (heap_bytes >= heap_size) { |   if (heap_bytes >= heap_size) { | ||||||
|     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; |     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; | ||||||
|     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; |     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; | ||||||
|     std::cout<< " Current value is " << (heap_size/(1024*1024)) <<std::endl; |     std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl; | ||||||
|  |     std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl; | ||||||
|  |     std::cout<< " Current heap  is " << (heap_size/(1024*1024)) <<"MB"<<std::endl; | ||||||
|     assert(heap_bytes<heap_size); |     assert(heap_bytes<heap_size); | ||||||
|   } |   } | ||||||
|   //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl; |   //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl; | ||||||
|   | |||||||
| @@ -102,7 +102,7 @@ public: | |||||||
|   /////////////////////////////////////////////////// |   /////////////////////////////////////////////////// | ||||||
|   static void SharedMemoryAllocate(uint64_t bytes, int flags); |   static void SharedMemoryAllocate(uint64_t bytes, int flags); | ||||||
|   static void SharedMemoryFree(void); |   static void SharedMemoryFree(void); | ||||||
|   static void SharedMemoryCopy(void *dest,const void *src,size_t bytes); |   static void SharedMemoryCopy(void *dest,void *src,size_t bytes); | ||||||
|   static void SharedMemoryZero(void *dest,size_t bytes); |   static void SharedMemoryZero(void *dest,size_t bytes); | ||||||
|  |  | ||||||
| }; | }; | ||||||
|   | |||||||
| @@ -7,6 +7,7 @@ | |||||||
|     Copyright (C) 2015 |     Copyright (C) 2015 | ||||||
|  |  | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
| @@ -29,8 +30,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
| #include <pwd.h> | #include <pwd.h> | ||||||
|  |  | ||||||
| #ifdef GRID_NVCC | #ifdef GRID_CUDA | ||||||
| #include <cuda_runtime_api.h> | #include <cuda_runtime_api.h> | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  | #include <hip/hip_runtime_api.h> | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_SYCl | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid);  | NAMESPACE_BEGIN(Grid);  | ||||||
| @@ -47,7 +54,12 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | |||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|   // Split into groups that can share memory |   // Split into groups that can share memory | ||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm); |   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm); | ||||||
|  | #else | ||||||
|  |   MPI_Comm_split(comm, WorldRank, 0, &WorldShmComm); | ||||||
|  | #endif | ||||||
|  |  | ||||||
|   MPI_Comm_rank(WorldShmComm     ,&WorldShmRank); |   MPI_Comm_rank(WorldShmComm     ,&WorldShmRank); | ||||||
|   MPI_Comm_size(WorldShmComm     ,&WorldShmSize); |   MPI_Comm_size(WorldShmComm     ,&WorldShmSize); | ||||||
|  |  | ||||||
| @@ -61,6 +73,7 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | |||||||
|   WorldNodes = WorldSize/WorldShmSize; |   WorldNodes = WorldSize/WorldShmSize; | ||||||
|   assert( (WorldNodes * WorldShmSize) == WorldSize ); |   assert( (WorldNodes * WorldShmSize) == WorldSize ); | ||||||
|  |  | ||||||
|  |  | ||||||
|   // FIXME: Check all WorldShmSize are the same ? |   // FIXME: Check all WorldShmSize are the same ? | ||||||
|  |  | ||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
| @@ -161,6 +174,23 @@ static inline int divides(int a,int b) | |||||||
| } | } | ||||||
| void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | ||||||
| { | { | ||||||
|  |   //////////////////////////////////////////////////////////////// | ||||||
|  |   // Allow user to configure through environment variable | ||||||
|  |   //////////////////////////////////////////////////////////////// | ||||||
|  |   char* str = getenv(("GRID_SHM_DIMS_" + std::to_string(ShmDims.size())).c_str()); | ||||||
|  |   if ( str ) { | ||||||
|  |     std::vector<int> IntShmDims; | ||||||
|  |     GridCmdOptionIntVector(std::string(str),IntShmDims); | ||||||
|  |     assert(IntShmDims.size() == WorldDims.size()); | ||||||
|  |     long ShmSize = 1; | ||||||
|  |     for (int dim=0;dim<WorldDims.size();dim++) { | ||||||
|  |       ShmSize *= (ShmDims[dim] = IntShmDims[dim]); | ||||||
|  |       assert(divides(ShmDims[dim],WorldDims[dim])); | ||||||
|  |     } | ||||||
|  |     assert(ShmSize == WorldShmSize); | ||||||
|  |     return; | ||||||
|  |   } | ||||||
|  |    | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Powers of 2,3,5 only in prime decomposition for now |   // Powers of 2,3,5 only in prime decomposition for now | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
| @@ -170,17 +200,24 @@ void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmD | |||||||
|   std::vector<int> primes({2,3,5}); |   std::vector<int> primes({2,3,5}); | ||||||
|  |  | ||||||
|   int dim = 0; |   int dim = 0; | ||||||
|  |   int last_dim = ndimension - 1; | ||||||
|   int AutoShmSize = 1; |   int AutoShmSize = 1; | ||||||
|   while(AutoShmSize != WorldShmSize) { |   while(AutoShmSize != WorldShmSize) { | ||||||
|     for(int p=0;p<primes.size();p++) { |     int p; | ||||||
|  |     for(p=0;p<primes.size();p++) { | ||||||
|       int prime=primes[p]; |       int prime=primes[p]; | ||||||
|       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) |       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) | ||||||
|         && divides(prime,WorldShmSize/AutoShmSize)  ) { |         && divides(prime,WorldShmSize/AutoShmSize)  ) { | ||||||
| 	AutoShmSize*=prime; | 	AutoShmSize*=prime; | ||||||
| 	ShmDims[dim]*=prime; | 	ShmDims[dim]*=prime; | ||||||
|  | 	last_dim = dim; | ||||||
| 	break; | 	break; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  |     if (p == primes.size() && last_dim == dim) { | ||||||
|  |       std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl; | ||||||
|  |       exit(EXIT_FAILURE); | ||||||
|  |     } | ||||||
|     dim=(dim+1) %ndimension; |     dim=(dim+1) %ndimension; | ||||||
|   } |   } | ||||||
| } | } | ||||||
| @@ -413,7 +450,47 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Hugetlbfs mapping intended | // Hugetlbfs mapping intended | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| #ifdef GRID_NVCC | #if defined(GRID_CUDA) ||defined(GRID_HIP)  || defined(GRID_SYCL) | ||||||
|  |  | ||||||
|  | //if defined(GRID_SYCL) | ||||||
|  | #if 0 | ||||||
|  | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
|  | { | ||||||
|  |   void * ShmCommBuf ;  | ||||||
|  |   assert(_ShmSetup==1); | ||||||
|  |   assert(_ShmAlloc==0); | ||||||
|  |  | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // allocate the pointer array for shared windows for our group | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   MPI_Barrier(WorldShmComm); | ||||||
|  |   WorldShmCommBufs.resize(WorldShmSize); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Each MPI rank should allocate our own buffer | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||||
|  |  | ||||||
|  |   if (ShmCommBuf == (void *)NULL ) { | ||||||
|  |     std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||||
|  |     exit(EXIT_FAILURE);   | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes  | ||||||
|  | 	    << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||||
|  |  | ||||||
|  |   SharedMemoryZero(ShmCommBuf,bytes); | ||||||
|  |  | ||||||
|  |   assert(WorldShmSize == 1); | ||||||
|  |   for(int r=0;r<WorldShmSize;r++){ | ||||||
|  |     WorldShmCommBufs[r] = ShmCommBuf; | ||||||
|  |   } | ||||||
|  |   _ShmAllocBytes=bytes; | ||||||
|  |   _ShmAlloc=1; | ||||||
|  | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | #if defined(GRID_CUDA) ||defined(GRID_HIP) ||defined(GRID_SYCL)   | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   void * ShmCommBuf ;  |   void * ShmCommBuf ;  | ||||||
| @@ -433,47 +510,73 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   //  cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2); |   //  cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2); | ||||||
|  |  | ||||||
| #ifdef GRID_IBM_SUMMIT |  | ||||||
|   // IBM Jsrun makes cuda Device numbering screwy and not match rank |  | ||||||
|     std::cout << "IBM Summit or similar - NOT setting device to WorldShmRank"<<std::endl; |  | ||||||
| #else |  | ||||||
|     std::cout << "setting device to WorldShmRank"<<std::endl; |  | ||||||
|     cudaSetDevice(WorldShmRank); |  | ||||||
| #endif |  | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Each MPI rank should allocate our own buffer |   // Each MPI rank should allocate our own buffer | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   auto err =  cudaMalloc(&ShmCommBuf, bytes); |   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||||
|   if ( err !=  cudaSuccess) { |  | ||||||
|     std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl; |  | ||||||
|     exit(EXIT_FAILURE);   |  | ||||||
|   } |  | ||||||
|   if (ShmCommBuf == (void *)NULL ) { |   if (ShmCommBuf == (void *)NULL ) { | ||||||
|     std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed NULL pointer for " << bytes<<" bytes " << std::endl; |     std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||||
|     exit(EXIT_FAILURE);   |     exit(EXIT_FAILURE);   | ||||||
|   } |   } | ||||||
|   if ( WorldRank == 0 ){ |   if ( WorldRank == 0 ){ | ||||||
|     std::cout << header " SharedMemoryMPI.cc cudaMalloc "<< bytes << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; |     std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes  | ||||||
|  | 	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||||
|   } |   } | ||||||
|   SharedMemoryZero(ShmCommBuf,bytes); |   SharedMemoryZero(ShmCommBuf,bytes); | ||||||
|  |   std::cout<< "Setting up IPC"<<std::endl; | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Loop over ranks/gpu's on our node |   // Loop over ranks/gpu's on our node | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   for(int r=0;r<WorldShmSize;r++){ |   for(int r=0;r<WorldShmSize;r++){ | ||||||
|  |  | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|     ////////////////////////////////////////////////// |     ////////////////////////////////////////////////// | ||||||
|     // If it is me, pass around the IPC access key |     // If it is me, pass around the IPC access key | ||||||
|     ////////////////////////////////////////////////// |     ////////////////////////////////////////////////// | ||||||
|     cudaIpcMemHandle_t handle; |     void * thisBuf = ShmCommBuf; | ||||||
|  |     if(!Stencil_force_mpi) { | ||||||
|  | #ifdef GRID_SYCL_LEVEL_ZERO_IPC | ||||||
|  |     typedef struct { int fd; pid_t pid ; } clone_mem_t; | ||||||
|  |  | ||||||
|  |     auto zeDevice    = cl::sycl::get_native<cl::sycl::backend::level_zero>(theGridAccelerator->get_device()); | ||||||
|  |     auto zeContext   = cl::sycl::get_native<cl::sycl::backend::level_zero>(theGridAccelerator->get_context()); | ||||||
|  |        | ||||||
|  |     ze_ipc_mem_handle_t ihandle; | ||||||
|  |     clone_mem_t handle; | ||||||
|  |  | ||||||
|     if ( r==WorldShmRank ) {  |     if ( r==WorldShmRank ) {  | ||||||
|       err = cudaIpcGetMemHandle(&handle,ShmCommBuf); |       auto err = zeMemGetIpcHandle(zeContext,ShmCommBuf,&ihandle); | ||||||
|  |       if ( err != ZE_RESULT_SUCCESS ) { | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc zeMemGetIpcHandle failed for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } else { | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc zeMemGetIpcHandle succeeded for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl; | ||||||
|  |       } | ||||||
|  |       memcpy((void *)&handle.fd,(void *)&ihandle,sizeof(int)); | ||||||
|  |       handle.pid = getpid(); | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |     cudaIpcMemHandle_t handle; | ||||||
|  |     if ( r==WorldShmRank ) {  | ||||||
|  |       auto err = cudaIpcGetMemHandle(&handle,ShmCommBuf); | ||||||
|       if ( err !=  cudaSuccess) { |       if ( err !=  cudaSuccess) { | ||||||
| 	std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | 	std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||||
| 	exit(EXIT_FAILURE); | 	exit(EXIT_FAILURE); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |     hipIpcMemHandle_t handle;     | ||||||
|  |     if ( r==WorldShmRank ) {  | ||||||
|  |       auto err = hipIpcGetMemHandle(&handle,ShmCommBuf); | ||||||
|  |       if ( err !=  hipSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc hipIpcGetMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|     ////////////////////////////////////////////////// |     ////////////////////////////////////////////////// | ||||||
|     // Share this IPC handle across the Shm Comm |     // Share this IPC handle across the Shm Comm | ||||||
|     ////////////////////////////////////////////////// |     ////////////////////////////////////////////////// | ||||||
| @@ -489,23 +592,68 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|     /////////////////////////////////////////////////////////////// |     /////////////////////////////////////////////////////////////// | ||||||
|     // If I am not the source, overwrite thisBuf with remote buffer |     // If I am not the source, overwrite thisBuf with remote buffer | ||||||
|     /////////////////////////////////////////////////////////////// |     /////////////////////////////////////////////////////////////// | ||||||
|     void * thisBuf = ShmCommBuf; |  | ||||||
|  | #ifdef GRID_SYCL_LEVEL_ZERO_IPC | ||||||
|     if ( r!=WorldShmRank ) { |     if ( r!=WorldShmRank ) { | ||||||
|       err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess); |       thisBuf = nullptr; | ||||||
|  |       std::cout<<"mapping seeking remote pid/fd " | ||||||
|  | 	       <<handle.pid<<"/" | ||||||
|  | 	       <<handle.fd<<std::endl; | ||||||
|  |  | ||||||
|  |       int pidfd = syscall(SYS_pidfd_open,handle.pid,0); | ||||||
|  |       std::cout<<"Using IpcHandle pidfd "<<pidfd<<"\n"; | ||||||
|  |       //      int myfd  = syscall(SYS_pidfd_getfd,pidfd,handle.fd,0); | ||||||
|  |       int myfd  = syscall(438,pidfd,handle.fd,0); | ||||||
|  |  | ||||||
|  |       std::cout<<"Using IpcHandle myfd "<<myfd<<"\n"; | ||||||
|  |        | ||||||
|  |       memcpy((void *)&ihandle,(void *)&myfd,sizeof(int)); | ||||||
|  |  | ||||||
|  |       auto err = zeMemOpenIpcHandle(zeContext,zeDevice,ihandle,0,&thisBuf); | ||||||
|  |       if ( err != ZE_RESULT_SUCCESS ) { | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc "<<zeContext<<" "<<zeDevice<<std::endl; | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc zeMemOpenIpcHandle failed for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl;  | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } else { | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc zeMemOpenIpcHandle succeeded for rank "<<r<<std::endl; | ||||||
|  | 	std::cout << "SharedMemoryMPI.cc zeMemOpenIpcHandle pointer is "<<std::hex<<thisBuf<<std::dec<<std::endl; | ||||||
|  |       } | ||||||
|  |       assert(thisBuf!=nullptr); | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |     if ( r!=WorldShmRank ) {  | ||||||
|  |       auto err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess); | ||||||
|       if ( err !=  cudaSuccess) { |       if ( err !=  cudaSuccess) { | ||||||
| 	std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | 	std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||||
| 	exit(EXIT_FAILURE); | 	exit(EXIT_FAILURE); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |     if ( r!=WorldShmRank ) {  | ||||||
|  |       auto err = hipIpcOpenMemHandle(&thisBuf,handle,hipIpcMemLazyEnablePeerAccess); | ||||||
|  |       if ( err !=  hipSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc hipIpcOpenMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|     /////////////////////////////////////////////////////////////// |     /////////////////////////////////////////////////////////////// | ||||||
|     // Save a copy of the device buffers |     // Save a copy of the device buffers | ||||||
|     /////////////////////////////////////////////////////////////// |     /////////////////////////////////////////////////////////////// | ||||||
|  |     } | ||||||
|     WorldShmCommBufs[r] = thisBuf; |     WorldShmCommBufs[r] = thisBuf; | ||||||
|  | #else | ||||||
|  |     WorldShmCommBufs[r] = ShmCommBuf; | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   _ShmAllocBytes=bytes; |   _ShmAllocBytes=bytes; | ||||||
|   _ShmAlloc=1; |   _ShmAlloc=1; | ||||||
| } | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
| #else  | #else  | ||||||
| #ifdef GRID_MPI3_SHMMMAP | #ifdef GRID_MPI3_SHMMMAP | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| @@ -633,7 +781,6 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| #endif | #endif | ||||||
|       void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0); |       void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0); | ||||||
|        |        | ||||||
|       //      std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< size<< "bytes)"<<std::endl; |  | ||||||
|       if ( ptr == (void * )MAP_FAILED ) {        |       if ( ptr == (void * )MAP_FAILED ) {        | ||||||
| 	perror("failed mmap");      | 	perror("failed mmap");      | ||||||
| 	assert(0);     | 	assert(0);     | ||||||
| @@ -677,16 +824,16 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| ///////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////// | ||||||
| void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||||
| { | { | ||||||
| #ifdef GRID_NVCC | #if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL) | ||||||
|   cudaMemset(dest,0,bytes); |   acceleratorMemSet(dest,0,bytes); | ||||||
| #else | #else | ||||||
|   bzero(dest,bytes); |   bzero(dest,bytes); | ||||||
| #endif | #endif | ||||||
| } | } | ||||||
| void GlobalSharedMemory::SharedMemoryCopy(void *dest,const void *src,size_t bytes) | void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||||
| { | { | ||||||
| #ifdef GRID_NVCC | #if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL) | ||||||
|   cudaMemcpy(dest,src,bytes,cudaMemcpyDefault); |   acceleratorCopyToDevice(src,dest,bytes); | ||||||
| #else    | #else    | ||||||
|   bcopy(src,dest,bytes); |   bcopy(src,dest,bytes); | ||||||
| #endif | #endif | ||||||
| @@ -705,7 +852,11 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | |||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|   // Split into groups that can share memory |   // Split into groups that can share memory | ||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm); |   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm); | ||||||
|  | #else | ||||||
|  |   MPI_Comm_split(comm, rank, 0, &ShmComm); | ||||||
|  | #endif | ||||||
|   MPI_Comm_rank(ShmComm     ,&ShmRank); |   MPI_Comm_rank(ShmComm     ,&ShmRank); | ||||||
|   MPI_Comm_size(ShmComm     ,&ShmSize); |   MPI_Comm_size(ShmComm     ,&ShmSize); | ||||||
|   ShmCommBufs.resize(ShmSize); |   ShmCommBufs.resize(ShmSize); | ||||||
| @@ -735,25 +886,18 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | |||||||
|   std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r; |   std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r; | ||||||
|   MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);  |   MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);  | ||||||
|  |  | ||||||
| #ifdef GRID_IBM_SUMMIT | #ifdef GRID_SHM_FORCE_MPI | ||||||
|   // Hide the shared memory path between sockets  |   // Hide the shared memory path between ranks | ||||||
|   // if even number of nodes |   { | ||||||
|   if ( (ShmSize & 0x1)==0 ) { |  | ||||||
|     int SocketSize = ShmSize/2; |  | ||||||
|     int mySocket = ShmRank/SocketSize;  |  | ||||||
|     for(int r=0;r<size;r++){ |     for(int r=0;r<size;r++){ | ||||||
|       int hisRank=ShmRanks[r]; |       if ( r!=rank ) { | ||||||
|       if ( hisRank!= MPI_UNDEFINED ) { | 	ShmRanks[r] = MPI_UNDEFINED; | ||||||
| 	int hisSocket=hisRank/SocketSize; |  | ||||||
| 	if ( hisSocket != mySocket ) { |  | ||||||
| 	  ShmRanks[r] = MPI_UNDEFINED; |  | ||||||
| 	} |  | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|   SharedMemoryTest(); |   //SharedMemoryTest(); | ||||||
| } | } | ||||||
| ////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////// | ||||||
| // On node barrier | // On node barrier | ||||||
|   | |||||||
| @@ -29,6 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid);  | NAMESPACE_BEGIN(Grid);  | ||||||
|  | #define header "SharedMemoryNone: " | ||||||
|  |  | ||||||
| /*Construct from an MPI communicator*/ | /*Construct from an MPI communicator*/ | ||||||
| void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||||
| @@ -55,6 +56,38 @@ void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_M | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Hugetlbfs mapping intended, use anonymous mmap | // Hugetlbfs mapping intended, use anonymous mmap | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | #if 1 | ||||||
|  | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
|  | { | ||||||
|  |   std::cout << header "SharedMemoryAllocate "<< bytes<< " GPU implementation "<<std::endl; | ||||||
|  |   void * ShmCommBuf ;  | ||||||
|  |   assert(_ShmSetup==1); | ||||||
|  |   assert(_ShmAlloc==0); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Each MPI rank should allocate our own buffer | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||||
|  |  | ||||||
|  |   if (ShmCommBuf == (void *)NULL ) { | ||||||
|  |     std::cerr << " SharedMemoryNone.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||||
|  |     exit(EXIT_FAILURE);   | ||||||
|  |   } | ||||||
|  |   if ( WorldRank == 0 ){ | ||||||
|  |     std::cout << WorldRank << header " SharedMemoryNone.cc acceleratorAllocDevice "<< bytes  | ||||||
|  | 	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||||
|  |   } | ||||||
|  |   SharedMemoryZero(ShmCommBuf,bytes); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Loop over ranks/gpu's on our node | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   WorldShmCommBufs[0] = ShmCommBuf; | ||||||
|  |  | ||||||
|  |   _ShmAllocBytes=bytes; | ||||||
|  |   _ShmAlloc=1; | ||||||
|  | } | ||||||
|  | #else | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   void * ShmCommBuf ;  |   void * ShmCommBuf ;  | ||||||
| @@ -83,7 +116,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|   _ShmAllocBytes=bytes; |   _ShmAllocBytes=bytes; | ||||||
|   _ShmAlloc=1; |   _ShmAlloc=1; | ||||||
| }; | }; | ||||||
|  | #endif | ||||||
|  | void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||||
|  | { | ||||||
|  |   acceleratorMemSet(dest,0,bytes); | ||||||
|  | } | ||||||
|  | void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||||
|  | { | ||||||
|  |   acceleratorCopyToDevice(src,dest,bytes); | ||||||
|  | } | ||||||
| //////////////////////////////////////////////////////// | //////////////////////////////////////////////////////// | ||||||
| // Global shared functionality finished | // Global shared functionality finished | ||||||
| // Now move to per communicator functionality | // Now move to per communicator functionality | ||||||
|   | |||||||
| @@ -49,4 +49,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifdef GRID_COMMS_SHMEM | #ifdef GRID_COMMS_SHMEM | ||||||
| #include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator | #include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator | ||||||
| #endif  | #endif  | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto Cshift(const Expression &expr,int dim,int shift)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return Cshift(closure(expr),dim,shift); | ||||||
|  | } | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -29,11 +29,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|  |  | ||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | extern Vector<std::pair<int,int> > Cshift_table;  | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| // Gather for when there is no need to SIMD split  | // Gather for when there is no need to SIMD split  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| template<class vobj> void  | template<class vobj> void  | ||||||
| Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | ||||||
| { | { | ||||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
| @@ -46,16 +48,16 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | |||||||
|   int e2=rhs.Grid()->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int ent = 0; |   int ent = 0; | ||||||
|  |  | ||||||
|   static Vector<std::pair<int,int> > table; table.resize(e1*e2); |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   int stride=rhs.Grid()->_slice_stride[dimension]; |   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   auto rhs_v = rhs.View(); |  | ||||||
|   if ( cbmask == 0x3 ) {  |   if ( cbmask == 0x3 ) {  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o  = n*stride; | 	int o  = n*stride; | ||||||
| 	int bo = n*e2; | 	int bo = n*e2; | ||||||
| 	table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | 	Cshift_table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } else {  |   } else {  | ||||||
| @@ -65,14 +67,26 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | |||||||
| 	 int o  = n*stride; | 	 int o  = n*stride; | ||||||
| 	 int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | 	 int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | ||||||
| 	 if ( ocb &cbmask ) { | 	 if ( ocb &cbmask ) { | ||||||
| 	   table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | 	   Cshift_table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | ||||||
| 	 } | 	 } | ||||||
|        } |        } | ||||||
|      } |      } | ||||||
|   } |   } | ||||||
|   thread_for(i,ent,{ |   { | ||||||
|     buffer[table[i].first]=rhs_v[table[i].second]; |     auto buffer_p = & buffer[0]; | ||||||
|   }); |     auto table = &Cshift_table[0]; | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  | 	coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       buffer_p[table[i].first]=rhs_v[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|  |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| @@ -95,43 +109,80 @@ Gather_plane_extract(const Lattice<vobj> &rhs, | |||||||
|   int e2=rhs.Grid()->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int n1=rhs.Grid()->_slice_stride[dimension]; |   int n1=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   auto rhs_v = rhs.View(); |  | ||||||
|   if ( cbmask ==0x3){ |   if ( cbmask ==0x3){ | ||||||
|     thread_for_collapse(2,n,e1,{ | #ifdef ACCELERATOR_CSHIFT | ||||||
|       for(int b=0;b<e2;b++){ |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for(nn,e1*e2,1,{ | ||||||
|  | 	int n = nn%e1; | ||||||
|  | 	int b = nn/e1; | ||||||
| 	int o      =   n*n1; | 	int o      =   n*n1; | ||||||
| 	int offset = b+n*e2; | 	int offset = b+n*e2; | ||||||
| 	 | 	 | ||||||
| 	vobj temp =rhs_v[so+o+b]; | 	vobj temp =rhs_v[so+o+b]; | ||||||
| 	extract<vobj>(temp,pointers,offset); | 	extract<vobj>(temp,pointers,offset); | ||||||
|       } |       }); | ||||||
|     }); | #else | ||||||
|   } else {  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  | 	int o      =   n*n1; | ||||||
|  | 	int offset = b+n*e2; | ||||||
| 	 | 	 | ||||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  | 	vobj temp =rhs_v[so+o+b]; | ||||||
|     // Test_cshift_red_black code. | 	extract<vobj>(temp,pointers,offset); | ||||||
|     std::cout << " Dense packed buffer WARNING " <<std::endl; |       }); | ||||||
|     thread_for_collapse(2,n,e1,{ | #endif | ||||||
|       for(int b=0;b<e2;b++){ |   } else {  | ||||||
|  |     Coordinate rdim=rhs.Grid()->_rdimensions; | ||||||
|  |     Coordinate cdm =rhs.Grid()->_checker_dim_mask; | ||||||
|  |     std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb? | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for(nn,e1*e2,1,{ | ||||||
|  | 	int n = nn%e1; | ||||||
|  | 	int b = nn/e1; | ||||||
|  |  | ||||||
|  | 	Coordinate coor; | ||||||
|  |  | ||||||
| 	int o=n*n1; | 	int o=n*n1; | ||||||
| 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | 	int oindex = o+b; | ||||||
|  |  | ||||||
|  |        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||||
|  |  | ||||||
|  | 	int ocb=1<<cb; | ||||||
| 	int offset = b+n*e2; | 	int offset = b+n*e2; | ||||||
|  |  | ||||||
| 	if ( ocb & cbmask ) { | 	if ( ocb & cbmask ) { | ||||||
| 	  vobj temp =rhs_v[so+o+b]; | 	  vobj temp =rhs_v[so+o+b]; | ||||||
| 	  extract<vobj>(temp,pointers,offset); | 	  extract<vobj>(temp,pointers,offset); | ||||||
| 	} | 	} | ||||||
|       } |       }); | ||||||
|     }); | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  |  | ||||||
|  | 	Coordinate coor; | ||||||
|  |  | ||||||
|  | 	int o=n*n1; | ||||||
|  | 	int oindex = o+b; | ||||||
|  |  | ||||||
|  |        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||||
|  |  | ||||||
|  | 	int ocb=1<<cb; | ||||||
|  | 	int offset = b+n*e2; | ||||||
|  |  | ||||||
|  | 	if ( ocb & cbmask ) { | ||||||
|  | 	  vobj temp =rhs_v[so+o+b]; | ||||||
|  | 	  extract<vobj>(temp,pointers,offset); | ||||||
|  | 	} | ||||||
|  |       }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // Scatter for when there is no need to SIMD split | // Scatter for when there is no need to SIMD split | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vobj> &buffer, int dimension,int plane,int cbmask) | template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
| @@ -145,7 +196,8 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | |||||||
|   int e2=rhs.Grid()->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int stride=rhs.Grid()->_slice_stride[dimension]; |   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   int ent    =0; |   int ent    =0; | ||||||
|  |  | ||||||
|   if ( cbmask ==0x3 ) { |   if ( cbmask ==0x3 ) { | ||||||
| @@ -154,7 +206,7 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | |||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| 	int bo  =n*rhs.Grid()->_slice_block[dimension]; | 	int bo  =n*rhs.Grid()->_slice_block[dimension]; | ||||||
| 	table[ent++] = std::pair<int,int>(so+o+b,bo+b); | 	Cshift_table[ent++] = std::pair<int,int>(so+o+b,bo+b); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  |  | ||||||
| @@ -165,16 +217,27 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | |||||||
| 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup | 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup | ||||||
| 	if ( ocb & cbmask ) { | 	if ( ocb & cbmask ) { | ||||||
| 	  table[ent++]=std::pair<int,int> (so+o+b,bo++); | 	  Cshift_table[ent++]=std::pair<int,int> (so+o+b,bo++); | ||||||
| 	} | 	} | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   auto rhs_v = rhs.View(); |   { | ||||||
|   thread_for(i,ent,{ |     auto buffer_p = & buffer[0]; | ||||||
|     rhs_v[table[i].first]=buffer[table[i].second]; |     auto table = &Cshift_table[0]; | ||||||
|   }); | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView( rhs_v, rhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  | 	coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v, rhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       rhs_v[table[i].first]=buffer_p[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|  |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| @@ -194,21 +257,33 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA | |||||||
|   int e2=rhs.Grid()->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|  |  | ||||||
|   if(cbmask ==0x3 ) { |   if(cbmask ==0x3 ) { | ||||||
|     auto rhs_v = rhs.View(); |     int _slice_stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|     thread_for_collapse(2,n,e1,{ |     int _slice_block = rhs.Grid()->_slice_block[dimension]; | ||||||
|       for(int b=0;b<e2;b++){ | #ifdef ACCELERATOR_CSHIFT     | ||||||
| 	int o      = n*rhs.Grid()->_slice_stride[dimension]; |     autoView( rhs_v , rhs, AcceleratorWrite); | ||||||
| 	int offset = b+n*rhs.Grid()->_slice_block[dimension]; |     accelerator_for(nn,e1*e2,1,{ | ||||||
|  | 	int n = nn%e1; | ||||||
|  | 	int b = nn/e1; | ||||||
|  | 	int o      = n*_slice_stride; | ||||||
|  | 	int offset = b+n*_slice_block; | ||||||
|  | 	merge(rhs_v[so+o+b],pointers,offset); | ||||||
|  |       }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v , rhs, CpuWrite); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  | 	int o      = n*_slice_stride; | ||||||
|  | 	int offset = b+n*_slice_block; | ||||||
| 	merge(rhs_v[so+o+b],pointers,offset); | 	merge(rhs_v[so+o+b],pointers,offset); | ||||||
|       } |  | ||||||
|     }); |     }); | ||||||
|  | #endif | ||||||
|   } else {  |   } else {  | ||||||
|  |  | ||||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  |     // Case of SIMD split AND checker dim cannot currently be hit, except in  | ||||||
|     // Test_cshift_red_black code. |     // Test_cshift_red_black code. | ||||||
|     //    std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME |     std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME | ||||||
|     std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl; |     std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl; | ||||||
|     auto rhs_v = rhs.View(); |     assert(0); // This will fail if hit on GPU | ||||||
|  |     autoView( rhs_v, rhs, CpuWrite); | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o      = n*rhs.Grid()->_slice_stride[dimension]; | 	int o      = n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| @@ -225,6 +300,7 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA | |||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // local to node block strided copies | // local to node block strided copies | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
| template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask) | template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
| @@ -239,14 +315,16 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs | |||||||
|   int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc |   int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc | ||||||
|   int e2=rhs.Grid()->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int stride = rhs.Grid()->_slice_stride[dimension]; |   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); |  | ||||||
|  |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   int ent=0; |   int ent=0; | ||||||
|  |  | ||||||
|   if(cbmask == 0x3 ){ |   if(cbmask == 0x3 ){ | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
|         int o =n*stride+b; |         int o =n*stride+b; | ||||||
| 	table[ent++] = std::pair<int,int>(lo+o,ro+o); | 	Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } else {  |   } else {  | ||||||
| @@ -255,23 +333,32 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs | |||||||
|         int o =n*stride+b; |         int o =n*stride+b; | ||||||
|         int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o); |         int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o); | ||||||
|         if ( ocb&cbmask ) { |         if ( ocb&cbmask ) { | ||||||
| 	  table[ent++] = std::pair<int,int>(lo+o,ro+o); | 	  Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||||
| 	} | 	} | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   auto rhs_v = rhs.View(); |   { | ||||||
|   auto lhs_v = lhs.View(); |     auto table = &Cshift_table[0]; | ||||||
|   thread_for(i,ent,{ | #ifdef ACCELERATOR_CSHIFT     | ||||||
|     lhs_v[table[i].first]=rhs_v[table[i].second]; |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|   }); |     autoView(lhs_v , lhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  |       coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     autoView(lhs_v , lhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       lhs_v[table[i].first]=rhs_v[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|  |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type) | template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type) | ||||||
| { | { | ||||||
|   |  | ||||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
| @@ -285,29 +372,41 @@ template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vo | |||||||
|   int e2=rhs.Grid()->_slice_block [dimension]; |   int e2=rhs.Grid()->_slice_block [dimension]; | ||||||
|   int stride = rhs.Grid()->_slice_stride[dimension]; |   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   static std::vector<std::pair<int,int> > table;  table.resize(e1*e2); |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   int ent=0; |   int ent=0; | ||||||
|  |  | ||||||
|   if ( cbmask == 0x3 ) { |   if ( cbmask == 0x3 ) { | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|     for(int b=0;b<e2;b++){ |     for(int b=0;b<e2;b++){ | ||||||
|       int o  =n*stride; |       int o  =n*stride; | ||||||
|       table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); |       Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||||
|     }} |     }} | ||||||
|   } else { |   } else { | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|     for(int b=0;b<e2;b++){ |     for(int b=0;b<e2;b++){ | ||||||
|       int o  =n*stride; |       int o  =n*stride; | ||||||
|       int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b); |       int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b); | ||||||
|       if ( ocb&cbmask ) table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); |       if ( ocb&cbmask ) Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||||
|     }} |     }} | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   auto rhs_v = rhs.View(); |   { | ||||||
|   auto lhs_v = lhs.View(); |     auto table = &Cshift_table[0]; | ||||||
|   thread_for(i,ent,{ | #ifdef ACCELERATOR_CSHIFT     | ||||||
|     permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); |     autoView( rhs_v, rhs, AcceleratorRead); | ||||||
|   }); |     autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,1,{ | ||||||
|  |       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v, rhs, CpuRead); | ||||||
|  |     autoView( lhs_v, lhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|  |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
|   | |||||||
| @@ -101,7 +101,8 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob | |||||||
|     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration |     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  | #define ACCELERATOR_CSHIFT_NO_COPY | ||||||
|  | #ifdef ACCELERATOR_CSHIFT_NO_COPY | ||||||
| template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
| { | { | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
| @@ -121,8 +122,8 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|   assert(shift<fd); |   assert(shift<fd); | ||||||
|    |    | ||||||
|   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; |   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||||
|   commVector<vobj> send_buf(buffer_size); |   static cshiftVector<vobj> send_buf; send_buf.resize(buffer_size); | ||||||
|   commVector<vobj> recv_buf(buffer_size); |   static cshiftVector<vobj> recv_buf; recv_buf.resize(buffer_size); | ||||||
|      |      | ||||||
|   int cb= (cbmask==0x2)? Odd : Even; |   int cb= (cbmask==0x2)? Odd : Even; | ||||||
|   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); |   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
| @@ -138,7 +139,7 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|  |  | ||||||
|     } else { |     } else { | ||||||
|  |  | ||||||
|       int words = send_buf.size(); |       int words = buffer_size; | ||||||
|       if (cbmask != 0x3) words=words>>1; |       if (cbmask != 0x3) words=words>>1; | ||||||
|  |  | ||||||
|       int bytes = words * sizeof(vobj); |       int bytes = words * sizeof(vobj); | ||||||
| @@ -150,12 +151,14 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|       int xmit_to_rank; |       int xmit_to_rank; | ||||||
|       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); |       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|       grid->SendToRecvFrom((void *)&send_buf[0], |       grid->SendToRecvFrom((void *)&send_buf[0], | ||||||
| 			   xmit_to_rank, | 			   xmit_to_rank, | ||||||
| 			   (void *)&recv_buf[0], | 			   (void *)&recv_buf[0], | ||||||
| 			   recv_from_rank, | 			   recv_from_rank, | ||||||
| 			   bytes); | 			   bytes); | ||||||
|  |  | ||||||
|       grid->Barrier(); |       grid->Barrier(); | ||||||
|  |  | ||||||
|       Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask); |       Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask); | ||||||
| @@ -195,8 +198,15 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; |   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||||
|   //  int words = sizeof(vobj)/sizeof(vector_type); |   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||||
|  |  | ||||||
|   std::vector<commVector<scalar_object> >   send_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); |   static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd); | ||||||
|   std::vector<commVector<scalar_object> >   recv_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); |   static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd); | ||||||
|  |   scalar_object *  recv_buf_extract_mpi; | ||||||
|  |   scalar_object *  send_buf_extract_mpi; | ||||||
|  |   | ||||||
|  |   for(int s=0;s<Nsimd;s++){ | ||||||
|  |     send_buf_extract[s].resize(buffer_size); | ||||||
|  |     recv_buf_extract[s].resize(buffer_size); | ||||||
|  |   } | ||||||
|  |  | ||||||
|   int bytes = buffer_size*sizeof(scalar_object); |   int bytes = buffer_size*sizeof(scalar_object); | ||||||
|  |  | ||||||
| @@ -242,11 +252,204 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|       if(nbr_proc){ |       if(nbr_proc){ | ||||||
| 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||||
|  |  | ||||||
| 	grid->SendToRecvFrom((void *)&send_buf_extract[nbr_lane][0], | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	send_buf_extract_mpi = &send_buf_extract[nbr_lane][0]; | ||||||
|  | 	recv_buf_extract_mpi = &recv_buf_extract[i][0]; | ||||||
|  | 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||||
| 			     xmit_to_rank, | 			     xmit_to_rank, | ||||||
| 			     (void *)&recv_buf_extract[i][0], | 			     (void *)recv_buf_extract_mpi, | ||||||
| 			     recv_from_rank, | 			     recv_from_rank, | ||||||
| 			     bytes); | 			     bytes); | ||||||
|  |  | ||||||
|  | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	rpointers[i] = &recv_buf_extract[i][0]; | ||||||
|  |       } else {  | ||||||
|  | 	rpointers[i] = &send_buf_extract[nbr_lane][0]; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |     } | ||||||
|  |     Scatter_plane_merge(ret,rpointers,dimension,x,cbmask); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  | #else  | ||||||
|  | template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |  | ||||||
|  |   GridBase *grid=rhs.Grid(); | ||||||
|  |   Lattice<vobj> temp(rhs.Grid()); | ||||||
|  |  | ||||||
|  |   int fd              = rhs.Grid()->_fdimensions[dimension]; | ||||||
|  |   int rd              = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |   int pd              = rhs.Grid()->_processors[dimension]; | ||||||
|  |   int simd_layout     = rhs.Grid()->_simd_layout[dimension]; | ||||||
|  |   int comm_dim        = rhs.Grid()->_processors[dimension] >1 ; | ||||||
|  |   assert(simd_layout==1); | ||||||
|  |   assert(comm_dim==1); | ||||||
|  |   assert(shift>=0); | ||||||
|  |   assert(shift<fd); | ||||||
|  |    | ||||||
|  |   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||||
|  |   static cshiftVector<vobj> send_buf_v; send_buf_v.resize(buffer_size); | ||||||
|  |   static cshiftVector<vobj> recv_buf_v; recv_buf_v.resize(buffer_size); | ||||||
|  |   vobj *send_buf; | ||||||
|  |   vobj *recv_buf; | ||||||
|  |   { | ||||||
|  |     grid->ShmBufferFreeAll(); | ||||||
|  |     size_t bytes = buffer_size*sizeof(vobj); | ||||||
|  |     send_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||||
|  |     recv_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||||
|  |   } | ||||||
|  |      | ||||||
|  |   int cb= (cbmask==0x2)? Odd : Even; | ||||||
|  |   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|  |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
|  |     int sx        =  (x+sshift)%rd; | ||||||
|  |     int comm_proc = ((x+sshift)/rd)%pd; | ||||||
|  |      | ||||||
|  |     if (comm_proc==0) { | ||||||
|  |  | ||||||
|  |       Copy_plane(ret,rhs,dimension,x,sx,cbmask);  | ||||||
|  |  | ||||||
|  |     } else { | ||||||
|  |  | ||||||
|  |       int words = buffer_size; | ||||||
|  |       if (cbmask != 0x3) words=words>>1; | ||||||
|  |  | ||||||
|  |       int bytes = words * sizeof(vobj); | ||||||
|  |  | ||||||
|  |       Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask); | ||||||
|  |  | ||||||
|  |       //      int rank           = grid->_processor; | ||||||
|  |       int recv_from_rank; | ||||||
|  |       int xmit_to_rank; | ||||||
|  |       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|  |       acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes); | ||||||
|  |       grid->SendToRecvFrom((void *)&send_buf[0], | ||||||
|  | 			   xmit_to_rank, | ||||||
|  | 			   (void *)&recv_buf[0], | ||||||
|  | 			   recv_from_rank, | ||||||
|  | 			   bytes); | ||||||
|  |       acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes); | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|  |       Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
|  | { | ||||||
|  |   GridBase *grid=rhs.Grid(); | ||||||
|  |   const int Nsimd = grid->Nsimd(); | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |   typedef typename vobj::scalar_object scalar_object; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |     | ||||||
|  |   int fd = grid->_fdimensions[dimension]; | ||||||
|  |   int rd = grid->_rdimensions[dimension]; | ||||||
|  |   int ld = grid->_ldimensions[dimension]; | ||||||
|  |   int pd = grid->_processors[dimension]; | ||||||
|  |   int simd_layout     = grid->_simd_layout[dimension]; | ||||||
|  |   int comm_dim        = grid->_processors[dimension] >1 ; | ||||||
|  |  | ||||||
|  |   //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd | ||||||
|  |   //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout  | ||||||
|  |   //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl; | ||||||
|  |  | ||||||
|  |   assert(comm_dim==1); | ||||||
|  |   assert(simd_layout==2); | ||||||
|  |   assert(shift>=0); | ||||||
|  |   assert(shift<fd); | ||||||
|  |  | ||||||
|  |   int permute_type=grid->PermuteType(dimension); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////// | ||||||
|  |   // Simd direction uses an extract/merge pair | ||||||
|  |   /////////////////////////////////////////////// | ||||||
|  |   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||||
|  |   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||||
|  |  | ||||||
|  |   static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd); | ||||||
|  |   static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd); | ||||||
|  |   scalar_object *  recv_buf_extract_mpi; | ||||||
|  |   scalar_object *  send_buf_extract_mpi; | ||||||
|  |   { | ||||||
|  |     size_t bytes = sizeof(scalar_object)*buffer_size; | ||||||
|  |     grid->ShmBufferFreeAll(); | ||||||
|  |     send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||||
|  |     recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||||
|  |   } | ||||||
|  |   for(int s=0;s<Nsimd;s++){ | ||||||
|  |     send_buf_extract[s].resize(buffer_size); | ||||||
|  |     recv_buf_extract[s].resize(buffer_size); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int bytes = buffer_size*sizeof(scalar_object); | ||||||
|  |  | ||||||
|  |   ExtractPointerArray<scalar_object>  pointers(Nsimd); //  | ||||||
|  |   ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // Work out what to send where | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   int cb    = (cbmask==0x2)? Odd : Even; | ||||||
|  |   int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|  |   // loop over outer coord planes orthog to dim | ||||||
|  |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
|  |     // FIXME call local permute copy if none are offnode. | ||||||
|  |     for(int i=0;i<Nsimd;i++){        | ||||||
|  |       pointers[i] = &send_buf_extract[i][0]; | ||||||
|  |     } | ||||||
|  |     int sx   = (x+sshift)%rd; | ||||||
|  |     Gather_plane_extract(rhs,pointers,dimension,sx,cbmask); | ||||||
|  |  | ||||||
|  |     for(int i=0;i<Nsimd;i++){ | ||||||
|  |        | ||||||
|  |       int inner_bit = (Nsimd>>(permute_type+1)); | ||||||
|  |       int ic= (i&inner_bit)? 1:0; | ||||||
|  |  | ||||||
|  |       int my_coor          = rd*ic + x; | ||||||
|  |       int nbr_coor         = my_coor+sshift; | ||||||
|  |       int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors | ||||||
|  |  | ||||||
|  |       int nbr_ic   = (nbr_coor%ld)/rd;    // inner coord of peer | ||||||
|  |       int nbr_ox   = (nbr_coor%rd);       // outer coord of peer | ||||||
|  |       int nbr_lane = (i&(~inner_bit)); | ||||||
|  |  | ||||||
|  |       int recv_from_rank; | ||||||
|  |       int xmit_to_rank; | ||||||
|  |  | ||||||
|  |       if (nbr_ic) nbr_lane|=inner_bit; | ||||||
|  |  | ||||||
|  |       assert (sx == nbr_ox); | ||||||
|  |  | ||||||
|  |       if(nbr_proc){ | ||||||
|  | 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||||
|  |  | ||||||
|  | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes); | ||||||
|  | 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||||
|  | 			     xmit_to_rank, | ||||||
|  | 			     (void *)recv_buf_extract_mpi, | ||||||
|  | 			     recv_from_rank, | ||||||
|  | 			     bytes); | ||||||
|  | 	acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes); | ||||||
|  |  | ||||||
| 	grid->Barrier(); | 	grid->Barrier(); | ||||||
| 	rpointers[i] = &recv_buf_extract[i][0]; | 	rpointers[i] = &recv_buf_extract[i][0]; | ||||||
|       } else {  |       } else {  | ||||||
| @@ -258,7 +461,7 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|   } |   } | ||||||
|  |  | ||||||
| } | } | ||||||
|  | #endif | ||||||
| NAMESPACE_END(Grid);  | NAMESPACE_END(Grid);  | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | |||||||
|  | #include <Grid/GridCore.h>        | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | Vector<std::pair<int,int> > Cshift_table;  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -26,6 +26,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #pragma once | #pragma once | ||||||
|  | #include <Grid/lattice/Lattice_view.h> | ||||||
| #include <Grid/lattice/Lattice_base.h> | #include <Grid/lattice/Lattice_base.h> | ||||||
| #include <Grid/lattice/Lattice_conformable.h> | #include <Grid/lattice/Lattice_conformable.h> | ||||||
| #include <Grid/lattice/Lattice_ET.h> | #include <Grid/lattice/Lattice_ET.h> | ||||||
| @@ -36,6 +37,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/lattice/Lattice_reduction.h> | #include <Grid/lattice/Lattice_reduction.h> | ||||||
| #include <Grid/lattice/Lattice_peekpoke.h> | #include <Grid/lattice/Lattice_peekpoke.h> | ||||||
| #include <Grid/lattice/Lattice_reality.h> | #include <Grid/lattice/Lattice_reality.h> | ||||||
|  | #include <Grid/lattice/Lattice_real_imag.h> | ||||||
| #include <Grid/lattice/Lattice_comparison_utils.h> | #include <Grid/lattice/Lattice_comparison_utils.h> | ||||||
| #include <Grid/lattice/Lattice_comparison.h> | #include <Grid/lattice/Lattice_comparison.h> | ||||||
| #include <Grid/lattice/Lattice_coordinate.h> | #include <Grid/lattice/Lattice_coordinate.h> | ||||||
| @@ -43,4 +45,4 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/lattice/Lattice_rng.h> | #include <Grid/lattice/Lattice_rng.h> | ||||||
| #include <Grid/lattice/Lattice_unary.h> | #include <Grid/lattice/Lattice_unary.h> | ||||||
| #include <Grid/lattice/Lattice_transfer.h> | #include <Grid/lattice/Lattice_transfer.h> | ||||||
|  | #include <Grid/lattice/Lattice_basis.h> | ||||||
|   | |||||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: neo <cossu@post.kek.jp> | Author: neo <cossu@post.kek.jp> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de | ||||||
|  |  | ||||||
| This program is free software; you can redistribute it and/or modify | This program is free software; you can redistribute it and/or modify | ||||||
| it under the terms of the GNU General Public License as published by | it under the terms of the GNU General Public License as published by | ||||||
| @@ -41,9 +42,24 @@ NAMESPACE_BEGIN(Grid); | |||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
| // Predicated where support | // Predicated where support | ||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
|  | #ifdef GRID_SIMT | ||||||
|  | // drop to scalar in SIMT; cleaner in fact | ||||||
| template <class iobj, class vobj, class robj> | template <class iobj, class vobj, class robj> | ||||||
| accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, | accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||||
|                             const robj &iffalse) { | 					const vobj &iftrue,  | ||||||
|  | 					const robj &iffalse)  | ||||||
|  | { | ||||||
|  |   Integer mask = TensorRemove(predicate); | ||||||
|  |   typename std::remove_const<vobj>::type ret= iffalse; | ||||||
|  |   if (mask) ret=iftrue; | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  | #else | ||||||
|  | template <class iobj, class vobj, class robj> | ||||||
|  | accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||||
|  | 					const vobj &iftrue,  | ||||||
|  | 					const robj &iffalse)  | ||||||
|  | { | ||||||
|   typename std::remove_const<vobj>::type ret; |   typename std::remove_const<vobj>::type ret; | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_object scalar_object; |   typedef typename vobj::scalar_object scalar_object; | ||||||
| @@ -67,6 +83,7 @@ accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftru | |||||||
|   merge(ret, falsevals); |   merge(ret, falsevals); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////// | ///////////////////////////////////////////////////// | ||||||
| //Specialization of getVectorType for lattices | //Specialization of getVectorType for lattices | ||||||
| @@ -80,26 +97,62 @@ struct getVectorType<Lattice<T> >{ | |||||||
| //--  recursive evaluation of expressions; -- | //--  recursive evaluation of expressions; -- | ||||||
| // handle leaves of syntax tree | // handle leaves of syntax tree | ||||||
| /////////////////////////////////////////////////// | /////////////////////////////////////////////////// | ||||||
| template<class sobj> accelerator_inline  | template<class sobj, | ||||||
|  |   typename std::enable_if<!is_lattice<sobj>::value&&!is_lattice_expr<sobj>::value,sobj>::type * = nullptr>  | ||||||
|  | accelerator_inline  | ||||||
| sobj eval(const uint64_t ss, const sobj &arg) | sobj eval(const uint64_t ss, const sobj &arg) | ||||||
| { | { | ||||||
|   return arg; |   return arg; | ||||||
| } | } | ||||||
|  |  | ||||||
| template <class lobj> accelerator_inline  | template <class lobj> accelerator_inline  | ||||||
| const lobj & eval(const uint64_t ss, const LatticeView<lobj> &arg)  | auto eval(const uint64_t ss, const LatticeView<lobj> &arg) -> decltype(arg(ss)) | ||||||
| { | { | ||||||
|   return arg[ss]; |   return arg(ss); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////// | ||||||
|  | //--  recursive evaluation of expressions; -- | ||||||
|  | // whole vector return, used only for expression return type inference | ||||||
|  | /////////////////////////////////////////////////// | ||||||
|  | template<class sobj> accelerator_inline  | ||||||
|  | sobj vecEval(const uint64_t ss, const sobj &arg) | ||||||
|  | { | ||||||
|  |   return arg; | ||||||
| } | } | ||||||
| template <class lobj> accelerator_inline  | template <class lobj> accelerator_inline  | ||||||
| const lobj & eval(const uint64_t ss, const Lattice<lobj> &arg)  | const lobj & vecEval(const uint64_t ss, const LatticeView<lobj> &arg)  | ||||||
| { | { | ||||||
|   auto view = arg.View(); |   return arg[ss]; | ||||||
|   return view[ss]; |  | ||||||
| } | } | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////// | /////////////////////////////////////////////////// | ||||||
| // handle nodes in syntax tree- eval one operand | // handle nodes in syntax tree- eval one operand | ||||||
|  | // vecEval needed (but never called as all expressions offloaded) to infer the return type | ||||||
|  | // in SIMT contexts of closure. | ||||||
|  | /////////////////////////////////////////////////// | ||||||
|  | template <typename Op, typename T1> accelerator_inline  | ||||||
|  | auto vecEval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||||
|  |   -> decltype(expr.op.func( vecEval(ss, expr.arg1))) | ||||||
|  | { | ||||||
|  |   return expr.op.func( vecEval(ss, expr.arg1) ); | ||||||
|  | } | ||||||
|  | // vecEval two operands | ||||||
|  | template <typename Op, typename T1, typename T2> accelerator_inline | ||||||
|  | auto vecEval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||||
|  |   -> decltype(expr.op.func( vecEval(ss,expr.arg1),vecEval(ss,expr.arg2))) | ||||||
|  | { | ||||||
|  |   return expr.op.func( vecEval(ss,expr.arg1), vecEval(ss,expr.arg2) ); | ||||||
|  | } | ||||||
|  | // vecEval three operands | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||||
|  | auto vecEval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||||
|  |   -> decltype(expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3))) | ||||||
|  | { | ||||||
|  |   return expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3)); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | /////////////////////////////////////////////////// | ||||||
|  | // handle nodes in syntax tree- eval one operand coalesced | ||||||
| /////////////////////////////////////////////////// | /////////////////////////////////////////////////// | ||||||
| template <typename Op, typename T1> accelerator_inline  | template <typename Op, typename T1> accelerator_inline  | ||||||
| auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||||
| @@ -107,23 +160,41 @@ auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr) | |||||||
| { | { | ||||||
|   return expr.op.func( eval(ss, expr.arg1) ); |   return expr.op.func( eval(ss, expr.arg1) ); | ||||||
| } | } | ||||||
| /////////////////////// |  | ||||||
| // eval two operands | // eval two operands | ||||||
| /////////////////////// |  | ||||||
| template <typename Op, typename T1, typename T2> accelerator_inline | template <typename Op, typename T1, typename T2> accelerator_inline | ||||||
| auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||||
|   -> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2))) |   -> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2))) | ||||||
| { | { | ||||||
|   return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) ); |   return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) ); | ||||||
| } | } | ||||||
| /////////////////////// |  | ||||||
| // eval three operands | // eval three operands | ||||||
| /////////////////////// |  | ||||||
| template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||||
| auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||||
|   -> decltype(expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3))) |   -> decltype(expr.op.func(eval(ss, expr.arg1),  | ||||||
|  | 			   eval(ss, expr.arg2),  | ||||||
|  | 			   eval(ss, expr.arg3))) | ||||||
| { | { | ||||||
|   return expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3)); | #ifdef GRID_SIMT | ||||||
|  |   // Handles Nsimd (vInteger) != Nsimd(ComplexD) | ||||||
|  |   typedef decltype(vecEval(ss, expr.arg2)) rvobj; | ||||||
|  |   typedef typename std::remove_reference<rvobj>::type vobj; | ||||||
|  |  | ||||||
|  |   const int Nsimd = vobj::vector_type::Nsimd(); | ||||||
|  |  | ||||||
|  |   auto vpred = vecEval(ss,expr.arg1); | ||||||
|  |  | ||||||
|  |   ExtractBuffer<Integer> mask(Nsimd); | ||||||
|  |   extract<vInteger, Integer>(TensorRemove(vpred), mask); | ||||||
|  |  | ||||||
|  |   int s = acceleratorSIMTlane(Nsimd); | ||||||
|  |   return expr.op.func(mask[s], | ||||||
|  | 		      eval(ss, expr.arg2),  | ||||||
|  | 		      eval(ss, expr.arg3)); | ||||||
|  | #else | ||||||
|  |   return expr.op.func(eval(ss, expr.arg1), | ||||||
|  | 		      eval(ss, expr.arg2),  | ||||||
|  | 		      eval(ss, expr.arg3)); | ||||||
|  | #endif | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -179,16 +250,12 @@ inline void CBFromExpression(int &cb, const T1 &lat)  // Lattice leaf | |||||||
|   cb = lat.Checkerboard(); |   cb = lat.Checkerboard(); | ||||||
| } | } | ||||||
| template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
| inline void CBFromExpression(int &cb, const T1 ¬lat)  // non-lattice leaf | inline void CBFromExpression(int &cb, const T1 ¬lat) {} // non-lattice leaf | ||||||
| { |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template <typename Op, typename T1> inline  | template <typename Op, typename T1> inline  | ||||||
| void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr)  | void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr)  | ||||||
| { | { | ||||||
|   CBFromExpression(cb, expr.arg1);  // recurse AST |   CBFromExpression(cb, expr.arg1);  // recurse AST | ||||||
| } | } | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2> inline  | template <typename Op, typename T1, typename T2> inline  | ||||||
| void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr)  | void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
| { | { | ||||||
| @@ -203,32 +270,86 @@ inline void CBFromExpression(int &cb, const LatticeTrinaryExpression<Op, T1, T2, | |||||||
|   CBFromExpression(cb, expr.arg3);  // recurse AST |   CBFromExpression(cb, expr.arg3);  // recurse AST | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | // ViewOpen | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewOpen(T1 &lat)  // Lattice leaf | ||||||
|  | { | ||||||
|  |   lat.ViewOpen(AcceleratorRead); | ||||||
|  | } | ||||||
|  | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  |   inline void ExpressionViewOpen(T1 ¬lat) {} | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1> inline  | ||||||
|  | void ExpressionViewOpen(LatticeUnaryExpression<Op, T1> &expr)  | ||||||
|  | {   | ||||||
|  |   ExpressionViewOpen(expr.arg1); // recurse AST | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1, typename T2> inline  | ||||||
|  | void ExpressionViewOpen(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg2);  // rrecurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> | ||||||
|  | inline void ExpressionViewOpen(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg2);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg3);  // recurse AST | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | // ViewClose | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewClose( T1 &lat)  // Lattice leaf | ||||||
|  | { | ||||||
|  |   lat.ViewClose(); | ||||||
|  | } | ||||||
|  | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewClose(T1 ¬lat) {} | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1> inline  | ||||||
|  | void ExpressionViewClose(LatticeUnaryExpression<Op, T1> &expr)  | ||||||
|  | {   | ||||||
|  |   ExpressionViewClose(expr.arg1); // recurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2> inline  | ||||||
|  | void ExpressionViewClose(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewClose(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg2);  // recurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> | ||||||
|  | inline void ExpressionViewClose(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewClose(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg2);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg3);  // recurse AST | ||||||
|  | } | ||||||
|  |  | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| // Unary operators and funcs | // Unary operators and funcs | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| #define GridUnopClass(name, ret)					\ | #define GridUnopClass(name, ret)					\ | ||||||
|   template <class arg>							\ |  | ||||||
|   struct name {								\ |   struct name {								\ | ||||||
|     static auto accelerator_inline func(const arg a) -> decltype(ret) { return ret; } \ |     template<class _arg> static auto accelerator_inline func(const _arg a) -> decltype(ret) { return ret; } \ | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
| GridUnopClass(UnarySub, -a); | GridUnopClass(UnarySub, -a); | ||||||
| GridUnopClass(UnaryNot, Not(a)); | GridUnopClass(UnaryNot, Not(a)); | ||||||
| GridUnopClass(UnaryAdj, adj(a)); |  | ||||||
| GridUnopClass(UnaryConj, conjugate(a)); |  | ||||||
| GridUnopClass(UnaryTrace, trace(a)); | GridUnopClass(UnaryTrace, trace(a)); | ||||||
| GridUnopClass(UnaryTranspose, transpose(a)); | GridUnopClass(UnaryTranspose, transpose(a)); | ||||||
| GridUnopClass(UnaryTa, Ta(a)); | GridUnopClass(UnaryTa, Ta(a)); | ||||||
| GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a)); | GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a)); | ||||||
| GridUnopClass(UnaryReal, real(a)); |  | ||||||
| GridUnopClass(UnaryImag, imag(a)); |  | ||||||
| GridUnopClass(UnaryToReal, toReal(a)); |  | ||||||
| GridUnopClass(UnaryToComplex, toComplex(a)); |  | ||||||
| GridUnopClass(UnaryTimesI, timesI(a)); | GridUnopClass(UnaryTimesI, timesI(a)); | ||||||
| GridUnopClass(UnaryTimesMinusI, timesMinusI(a)); | GridUnopClass(UnaryTimesMinusI, timesMinusI(a)); | ||||||
| GridUnopClass(UnaryAbs, abs(a)); | GridUnopClass(UnaryAbs, abs(a)); | ||||||
| GridUnopClass(UnarySqrt, sqrt(a)); | GridUnopClass(UnarySqrt, sqrt(a)); | ||||||
| GridUnopClass(UnaryRsqrt, rsqrt(a)); |  | ||||||
| GridUnopClass(UnarySin, sin(a)); | GridUnopClass(UnarySin, sin(a)); | ||||||
| GridUnopClass(UnaryCos, cos(a)); | GridUnopClass(UnaryCos, cos(a)); | ||||||
| GridUnopClass(UnaryAsin, asin(a)); | GridUnopClass(UnaryAsin, asin(a)); | ||||||
| @@ -240,10 +361,10 @@ GridUnopClass(UnaryExp, exp(a)); | |||||||
| // Binary operators | // Binary operators | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| #define GridBinOpClass(name, combination)			\ | #define GridBinOpClass(name, combination)			\ | ||||||
|   template <class left, class right>				\ |  | ||||||
|   struct name {							\ |   struct name {							\ | ||||||
|  |     template <class _left, class _right>			\ | ||||||
|     static auto accelerator_inline				\ |     static auto accelerator_inline				\ | ||||||
|     func(const left &lhs, const right &rhs)			\ |     func(const _left &lhs, const _right &rhs)			\ | ||||||
|       -> decltype(combination) const				\ |       -> decltype(combination) const				\ | ||||||
|     {								\ |     {								\ | ||||||
|       return combination;					\ |       return combination;					\ | ||||||
| @@ -263,10 +384,10 @@ GridBinOpClass(BinaryOrOr, lhs || rhs); | |||||||
| // Trinary conditional op | // Trinary conditional op | ||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
| #define GridTrinOpClass(name, combination)				\ | #define GridTrinOpClass(name, combination)				\ | ||||||
|   template <class predicate, class left, class right>			\ |  | ||||||
|   struct name {								\ |   struct name {								\ | ||||||
|  |     template <class _predicate,class _left, class _right>		\ | ||||||
|     static auto accelerator_inline					\ |     static auto accelerator_inline					\ | ||||||
|     func(const predicate &pred, const left &lhs, const right &rhs)	\ |     func(const _predicate &pred, const _left &lhs, const _right &rhs)	\ | ||||||
|       -> decltype(combination) const					\ |       -> decltype(combination) const					\ | ||||||
|     {									\ |     {									\ | ||||||
|       return combination;						\ |       return combination;						\ | ||||||
| @@ -274,17 +395,17 @@ GridBinOpClass(BinaryOrOr, lhs || rhs); | |||||||
|   }; |   }; | ||||||
|  |  | ||||||
| GridTrinOpClass(TrinaryWhere, | GridTrinOpClass(TrinaryWhere, | ||||||
| 		(predicatedWhere<predicate,  | 		(predicatedWhere< | ||||||
| 		 typename std::remove_reference<left>::type, | 		 typename std::remove_reference<_predicate>::type,  | ||||||
| 		 typename std::remove_reference<right>::type>(pred, lhs,rhs))); | 		 typename std::remove_reference<_left>::type, | ||||||
|  | 		 typename std::remove_reference<_right>::type>(pred, lhs,rhs))); | ||||||
|  |  | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| // Operator syntactical glue | // Operator syntactical glue | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
|  | #define GRID_UNOP(name)   name | ||||||
| #define GRID_UNOP(name)   name<decltype(eval(0, arg))> | #define GRID_BINOP(name)  name | ||||||
| #define GRID_BINOP(name)  name<decltype(eval(0, lhs)), decltype(eval(0, rhs))> | #define GRID_TRINOP(name) name | ||||||
| #define GRID_TRINOP(name) name<decltype(eval(0, pred)), decltype(eval(0, lhs)), decltype(eval(0, rhs))> |  | ||||||
|  |  | ||||||
| #define GRID_DEF_UNOP(op, name)						\ | #define GRID_DEF_UNOP(op, name)						\ | ||||||
|   template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \ |   template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \ | ||||||
| @@ -330,22 +451,17 @@ GridTrinOpClass(TrinaryWhere, | |||||||
| GRID_DEF_UNOP(operator-, UnarySub); | GRID_DEF_UNOP(operator-, UnarySub); | ||||||
| GRID_DEF_UNOP(Not, UnaryNot); | GRID_DEF_UNOP(Not, UnaryNot); | ||||||
| GRID_DEF_UNOP(operator!, UnaryNot); | GRID_DEF_UNOP(operator!, UnaryNot); | ||||||
| GRID_DEF_UNOP(adj, UnaryAdj); | //GRID_DEF_UNOP(adj, UnaryAdj); | ||||||
| GRID_DEF_UNOP(conjugate, UnaryConj); | //GRID_DEF_UNOP(conjugate, UnaryConj); | ||||||
| GRID_DEF_UNOP(trace, UnaryTrace); | GRID_DEF_UNOP(trace, UnaryTrace); | ||||||
| GRID_DEF_UNOP(transpose, UnaryTranspose); | GRID_DEF_UNOP(transpose, UnaryTranspose); | ||||||
| GRID_DEF_UNOP(Ta, UnaryTa); | GRID_DEF_UNOP(Ta, UnaryTa); | ||||||
| GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup); | GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup); | ||||||
| GRID_DEF_UNOP(real, UnaryReal); |  | ||||||
| GRID_DEF_UNOP(imag, UnaryImag); |  | ||||||
| GRID_DEF_UNOP(toReal, UnaryToReal); |  | ||||||
| GRID_DEF_UNOP(toComplex, UnaryToComplex); |  | ||||||
| GRID_DEF_UNOP(timesI, UnaryTimesI); | GRID_DEF_UNOP(timesI, UnaryTimesI); | ||||||
| GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI); | GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI); | ||||||
| GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the | GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the | ||||||
|                                // abs-fabs-dabs-labs thing |                                // abs-fabs-dabs-labs thing | ||||||
| GRID_DEF_UNOP(sqrt, UnarySqrt); | GRID_DEF_UNOP(sqrt, UnarySqrt); | ||||||
| GRID_DEF_UNOP(rsqrt, UnaryRsqrt); |  | ||||||
| GRID_DEF_UNOP(sin, UnarySin); | GRID_DEF_UNOP(sin, UnarySin); | ||||||
| GRID_DEF_UNOP(cos, UnaryCos); | GRID_DEF_UNOP(cos, UnaryCos); | ||||||
| GRID_DEF_UNOP(asin, UnaryAsin); | GRID_DEF_UNOP(asin, UnaryAsin); | ||||||
| @@ -370,29 +486,36 @@ GRID_DEF_TRINOP(where, TrinaryWhere); | |||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| template <class Op, class T1> | template <class Op, class T1> | ||||||
| auto closure(const LatticeUnaryExpression<Op, T1> &expr) | auto closure(const LatticeUnaryExpression<Op, T1> &expr) | ||||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1)))>  |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type >  | ||||||
| { | { | ||||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1)))> ret(expr); |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > ret(expr); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| template <class Op, class T1, class T2> | template <class Op, class T1, class T2> | ||||||
| auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr) | auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr) | ||||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))>  |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > | ||||||
| { | { | ||||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))> ret(expr); |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > ret(expr); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| template <class Op, class T1, class T2, class T3> | template <class Op, class T1, class T2, class T3> | ||||||
| auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | ||||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1), |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||||
| 				   eval(0, expr.arg2), | 				   vecEval(0, expr.arg2), | ||||||
| 				   eval(0, expr.arg3)))>  | 				   vecEval(0, expr.arg3)))>::type > | ||||||
| { | { | ||||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1), |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||||
| 				eval(0, expr.arg2), | 				vecEval(0, expr.arg2), | ||||||
| 				eval(0, expr.arg3)))>  ret(expr); | 			        vecEval(0, expr.arg3)))>::type >  ret(expr); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|  | #define EXPRESSION_CLOSURE(function)					\ | ||||||
|  |   template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> \ | ||||||
|  |     auto function(Expression &expr) -> decltype(function(closure(expr))) \ | ||||||
|  |   {									\ | ||||||
|  |     return function(closure(expr));					\ | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |  | ||||||
| #undef GRID_UNOP | #undef GRID_UNOP | ||||||
| #undef GRID_BINOP | #undef GRID_BINOP | ||||||
|   | |||||||
| @@ -7,6 +7,7 @@ | |||||||
|     Copyright (C) 2015 |     Copyright (C) 2015 | ||||||
|  |  | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
| @@ -36,9 +37,9 @@ NAMESPACE_BEGIN(Grid); | |||||||
| template<class obj1,class obj2,class obj3> inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
| @@ -55,13 +56,13 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | |||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |  | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
|     auto rhs_t=rhs_v(ss); |     auto rhs_t=rhs_v(ss); | ||||||
|  |     auto tmp  =ret_v(ss); | ||||||
|     mac(&tmp,&lhs_t,&rhs_t); |     mac(&tmp,&lhs_t,&rhs_t); | ||||||
|     coalescedWrite(ret_v[ss],tmp); |     coalescedWrite(ret_v[ss],tmp); | ||||||
|   }); |   }); | ||||||
| @@ -72,9 +73,9 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | |||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
| @@ -88,9 +89,9 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | |||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
| @@ -107,8 +108,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(lhs,ret); |   conformable(lhs,ret); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     mult(&tmp,&lhs_v(ss),&rhs); |     mult(&tmp,&lhs_v(ss),&rhs); | ||||||
| @@ -120,10 +121,10 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,lhs); |   conformable(ret,lhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     auto tmp  =ret_v(ss); | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
|     mac(&tmp,&lhs_t,&rhs); |     mac(&tmp,&lhs_t,&rhs); | ||||||
|     coalescedWrite(ret_v[ss],tmp); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| @@ -134,8 +135,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,lhs); |   conformable(ret,lhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
| @@ -147,8 +148,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|   ret.Checkerboard() = lhs.Checkerboard(); |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(lhs,ret); |   conformable(lhs,ret); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto lhs_t=lhs_v(ss); |     auto lhs_t=lhs_v(ss); | ||||||
| @@ -164,8 +165,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto rhs_v = lhs.View(); |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto rhs_t=rhs_v(ss); |     auto rhs_t=rhs_v(ss); | ||||||
| @@ -178,10 +179,10 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto rhs_v = lhs.View(); |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     auto tmp  =ret_v(ss); | ||||||
|     auto rhs_t=rhs_v(ss); |     auto rhs_t=rhs_v(ss); | ||||||
|     mac(&tmp,&lhs,&rhs_t); |     mac(&tmp,&lhs,&rhs_t); | ||||||
|     coalescedWrite(ret_v[ss],tmp); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| @@ -192,8 +193,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto rhs_v = lhs.View(); |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto rhs_t=rhs_v(ss); |     auto rhs_t=rhs_v(ss); | ||||||
| @@ -205,8 +206,8 @@ template<class obj1,class obj2,class obj3> inline | |||||||
| void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto rhs_v = lhs.View(); |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|     decltype(coalescedRead(obj1())) tmp; |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     auto rhs_t=rhs_v(ss); |     auto rhs_t=rhs_v(ss); | ||||||
| @@ -220,11 +221,11 @@ void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> & | |||||||
|   ret.Checkerboard() = x.Checkerboard(); |   ret.Checkerboard() = x.Checkerboard(); | ||||||
|   conformable(ret,x); |   conformable(ret,x); | ||||||
|   conformable(x,y); |   conformable(x,y); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto x_v = x.View(); |   autoView( x_v , x, AcceleratorRead); | ||||||
|   auto y_v = y.View(); |   autoView( y_v , y, AcceleratorRead); | ||||||
|   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||||
|     auto tmp = a*x_v(ss)+y_v(ss); |     auto tmp = a*coalescedRead(x_v[ss])+coalescedRead(y_v[ss]); | ||||||
|     coalescedWrite(ret_v[ss],tmp); |     coalescedWrite(ret_v[ss],tmp); | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| @@ -233,9 +234,9 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice | |||||||
|   ret.Checkerboard() = x.Checkerboard(); |   ret.Checkerboard() = x.Checkerboard(); | ||||||
|   conformable(ret,x); |   conformable(ret,x); | ||||||
|   conformable(x,y); |   conformable(x,y); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto x_v = x.View(); |   autoView( x_v , x, AcceleratorRead); | ||||||
|   auto y_v = y.View(); |   autoView( y_v , y, AcceleratorRead); | ||||||
|   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||||
|     auto tmp = a*x_v(ss)+b*y_v(ss); |     auto tmp = a*x_v(ss)+b*y_v(ss); | ||||||
|     coalescedWrite(ret_v[ss],tmp); |     coalescedWrite(ret_v[ss],tmp); | ||||||
|   | |||||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
| This program is free software; you can redistribute it and/or modify | This program is free software; you can redistribute it and/or modify | ||||||
| it under the terms of the GNU General Public License as published by | it under the terms of the GNU General Public License as published by | ||||||
| @@ -28,6 +29,7 @@ See the full license in the file "LICENSE" in the top level distribution | |||||||
| directory | directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| 			   /*  END LEGAL */ | 			   /*  END LEGAL */ | ||||||
|  |  | ||||||
| #pragma once  | #pragma once  | ||||||
|  |  | ||||||
| #define STREAMING_STORES | #define STREAMING_STORES | ||||||
| @@ -36,129 +38,6 @@ NAMESPACE_BEGIN(Grid); | |||||||
|  |  | ||||||
| extern int GridCshiftPermuteMap[4][16]; | extern int GridCshiftPermuteMap[4][16]; | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////// |  | ||||||
| // Base class which can be used by traits to pick up behaviour |  | ||||||
| /////////////////////////////////////////////////////////////////// |  | ||||||
| class LatticeBase {}; |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| // Conformable checks; same instance of Grid required |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| void accelerator_inline conformable(GridBase *lhs,GridBase *rhs) |  | ||||||
| { |  | ||||||
|   assert(lhs == rhs); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////// |  | ||||||
| // Minimal base class containing only data valid to access from accelerator |  | ||||||
| // _odata will be a managed pointer in CUDA |  | ||||||
| //////////////////////////////////////////////////////////////////////////// |  | ||||||
| // Force access to lattice through a view object. |  | ||||||
| // prevents writing of code that will not offload to GPU, but perhaps annoyingly |  | ||||||
| // strict since host could could in principle direct access through the lattice object |  | ||||||
| // Need to decide programming model. |  | ||||||
| #define LATTICE_VIEW_STRICT |  | ||||||
| template<class vobj> class LatticeAccelerator : public LatticeBase |  | ||||||
| { |  | ||||||
| protected: |  | ||||||
|   GridBase *_grid; |  | ||||||
|   int checkerboard; |  | ||||||
|   vobj     *_odata;    // A managed pointer |  | ||||||
|   uint64_t _odata_size;     |  | ||||||
| public: |  | ||||||
|   accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr) { };  |  | ||||||
|   accelerator_inline uint64_t oSites(void) const { return _odata_size; }; |  | ||||||
|   accelerator_inline int  Checkerboard(void) const { return checkerboard; }; |  | ||||||
|   accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view |  | ||||||
|   accelerator_inline void Conformable(GridBase * &grid) const |  | ||||||
|   {  |  | ||||||
|     if (grid) conformable(grid, _grid); |  | ||||||
|     else      grid = _grid; |  | ||||||
|   }; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| // A View class which provides accessor to the data. |  | ||||||
| // This will be safe to call from accelerator_for and is trivially copy constructible |  | ||||||
| // The copy constructor for this will need to be used by device lambda functions |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| template<class vobj>  |  | ||||||
| class LatticeView : public LatticeAccelerator<vobj> |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|  |  | ||||||
|  |  | ||||||
|   // Rvalue |  | ||||||
| #ifdef __CUDA_ARCH__ |  | ||||||
|   accelerator_inline const typename vobj::scalar_object operator()(size_t i) const { return coalescedRead(this->_odata[i]); } |  | ||||||
| #else  |  | ||||||
|   accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; } |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
|   accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; |  | ||||||
|   accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; }; |  | ||||||
|  |  | ||||||
|   accelerator_inline uint64_t begin(void) const { return 0;}; |  | ||||||
|   accelerator_inline uint64_t end(void)   const { return this->_odata_size; }; |  | ||||||
|   accelerator_inline uint64_t size(void)  const { return this->_odata_size; }; |  | ||||||
|  |  | ||||||
|   LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me) |  | ||||||
|   { |  | ||||||
|   } |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| // Lattice expression types used by ET to assemble the AST |  | ||||||
| //  |  | ||||||
| // Need to be able to detect code paths according to the whether a lattice object or not |  | ||||||
| // so introduce some trait type things |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|  |  | ||||||
| class LatticeExpressionBase {}; |  | ||||||
|  |  | ||||||
| template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>; |  | ||||||
| template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >; |  | ||||||
|  |  | ||||||
| template<class T, bool isLattice> struct ViewMapBase { typedef T Type; }; |  | ||||||
| template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; }; |  | ||||||
| template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >; |  | ||||||
|  |  | ||||||
| template <typename Op, typename _T1>                            |  | ||||||
| class LatticeUnaryExpression : public  LatticeExpressionBase  |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|   typedef typename ViewMap<_T1>::Type T1; |  | ||||||
|   Op op; |  | ||||||
|   T1 arg1; |  | ||||||
|   LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| template <typename Op, typename _T1, typename _T2>               |  | ||||||
| class LatticeBinaryExpression : public LatticeExpressionBase  |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|   typedef typename ViewMap<_T1>::Type T1; |  | ||||||
|   typedef typename ViewMap<_T2>::Type T2; |  | ||||||
|   Op op; |  | ||||||
|   T1 arg1; |  | ||||||
|   T2 arg2; |  | ||||||
|   LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| template <typename Op, typename _T1, typename _T2, typename _T3>  |  | ||||||
| class LatticeTrinaryExpression : public LatticeExpressionBase  |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|   typedef typename ViewMap<_T1>::Type T1; |  | ||||||
|   typedef typename ViewMap<_T2>::Type T2; |  | ||||||
|   typedef typename ViewMap<_T3>::Type T3; |  | ||||||
|   Op op; |  | ||||||
|   T1 arg1; |  | ||||||
|   T2 arg2; |  | ||||||
|   T3 arg3; |  | ||||||
|   LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // The real lattice class, with normal copy and assignment semantics. | // The real lattice class, with normal copy and assignment semantics. | ||||||
| // This contains extra (host resident) grid pointer data that may be accessed by host code | // This contains extra (host resident) grid pointer data that may be accessed by host code | ||||||
| @@ -201,14 +80,23 @@ private: | |||||||
|     } |     } | ||||||
|   } |   } | ||||||
| public: | public: | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Can use to make accelerator dirty without copy from host ; useful for temporaries "dont care" prev contents | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   void SetViewMode(ViewMode mode) { | ||||||
|  |     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||||
|  |     accessor.ViewClose(); | ||||||
|  |   } | ||||||
|   ///////////////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Return a view object that may be dereferenced in site loops. |   // Return a view object that may be dereferenced in site loops. | ||||||
|   // The view is trivially copy constructible and may be copied to an accelerator device |   // The view is trivially copy constructible and may be copied to an accelerator device | ||||||
|   // in device lambdas |   // in device lambdas | ||||||
|   ///////////////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|   LatticeView<vobj> View (void) const  |  | ||||||
|  |   LatticeView<vobj> View (ViewMode mode) const  | ||||||
|   { |   { | ||||||
|     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this)); |     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||||
|     return accessor; |     return accessor; | ||||||
|   } |   } | ||||||
|  |  | ||||||
| @@ -232,11 +120,15 @@ public: | |||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     this->checkerboard=cb; |     this->checkerboard=cb; | ||||||
|      |      | ||||||
|     auto me  = View(); |     auto exprCopy = expr; | ||||||
|     accelerator_for(ss,me.size(),1,{ |     ExpressionViewOpen(exprCopy); | ||||||
|       auto tmp = eval(ss,expr); |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       vstream(me[ss],tmp); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|  |       auto tmp = eval(ss,exprCopy); | ||||||
|  |       coalescedWrite(me[ss],tmp); | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose(); | ||||||
|  |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr) |   template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr) | ||||||
| @@ -251,11 +143,15 @@ public: | |||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     this->checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |  | ||||||
|     auto me  = View(); |     auto exprCopy = expr; | ||||||
|     accelerator_for(ss,me.size(),1,{ |     ExpressionViewOpen(exprCopy); | ||||||
|       auto tmp = eval(ss,expr); |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       vstream(me[ss],tmp); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|  |       auto tmp = eval(ss,exprCopy); | ||||||
|  |       coalescedWrite(me[ss],tmp); | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose(); | ||||||
|  |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr) |   template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr) | ||||||
| @@ -269,11 +165,15 @@ public: | |||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     this->checkerboard=cb; |     this->checkerboard=cb; | ||||||
|     auto me  = View(); |     auto exprCopy = expr; | ||||||
|     accelerator_for(ss,me.size(),1,{ |     ExpressionViewOpen(exprCopy); | ||||||
|       auto tmp = eval(ss,expr); |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       vstream(me[ss],tmp); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|  |       auto tmp = eval(ss,exprCopy); | ||||||
|  |       coalescedWrite(me[ss],tmp); | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose(); | ||||||
|  |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   //GridFromExpression is tricky to do |   //GridFromExpression is tricky to do | ||||||
| @@ -324,10 +224,11 @@ public: | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){ |   template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){ | ||||||
|     auto me  = View(); |     auto me  = View(CpuWrite); | ||||||
|     thread_for(ss,me.size(),{ |     thread_for(ss,me.size(),{ | ||||||
|       me[ss] = r; | 	me[ss]= r; | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose(); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|  |  | ||||||
| @@ -337,11 +238,12 @@ public: | |||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   // user defined constructor |   // user defined constructor | ||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   Lattice(GridBase *grid) {  |   Lattice(GridBase *grid,ViewMode mode=AcceleratorWriteDiscard) {  | ||||||
|     this->_grid = grid; |     this->_grid = grid; | ||||||
|     resize(this->_grid->oSites()); |     resize(this->_grid->oSites()); | ||||||
|     assert((((uint64_t)&this->_odata[0])&0xF) ==0); |     assert((((uint64_t)&this->_odata[0])&0xF) ==0); | ||||||
|     this->checkerboard=0; |     this->checkerboard=0; | ||||||
|  |     SetViewMode(mode); | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   //  virtual ~Lattice(void) = default; |   //  virtual ~Lattice(void) = default; | ||||||
| @@ -357,7 +259,6 @@ public: | |||||||
|   // copy constructor |   // copy constructor | ||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   Lattice(const Lattice& r){  |   Lattice(const Lattice& r){  | ||||||
|     //    std::cout << "Lattice constructor(const Lattice &) "<<this<<std::endl;  |  | ||||||
|     this->_grid = r.Grid(); |     this->_grid = r.Grid(); | ||||||
|     resize(this->_grid->oSites()); |     resize(this->_grid->oSites()); | ||||||
|     *this = r; |     *this = r; | ||||||
| @@ -380,11 +281,12 @@ public: | |||||||
|     typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0; |     typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0; | ||||||
|     conformable(*this,r); |     conformable(*this,r); | ||||||
|     this->checkerboard = r.Checkerboard(); |     this->checkerboard = r.Checkerboard(); | ||||||
|     auto me =   View(); |     auto me =   View(AcceleratorWriteDiscard); | ||||||
|     auto him= r.View(); |     auto him= r.View(AcceleratorRead); | ||||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|       coalescedWrite(me[ss],him(ss)); |       coalescedWrite(me[ss],him(ss)); | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose();    him.ViewClose(); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|  |  | ||||||
| @@ -394,11 +296,12 @@ public: | |||||||
|   inline Lattice<vobj> & operator = (const Lattice<vobj> & r){ |   inline Lattice<vobj> & operator = (const Lattice<vobj> & r){ | ||||||
|     this->checkerboard = r.Checkerboard(); |     this->checkerboard = r.Checkerboard(); | ||||||
|     conformable(*this,r); |     conformable(*this,r); | ||||||
|     auto me =   View(); |     auto me =   View(AcceleratorWriteDiscard); | ||||||
|     auto him= r.View(); |     auto him= r.View(AcceleratorRead); | ||||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|       coalescedWrite(me[ss],him(ss)); |       coalescedWrite(me[ss],him(ss)); | ||||||
|     }); |     }); | ||||||
|  |     me.ViewClose();    him.ViewClose(); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   | |||||||
							
								
								
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,248 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/lattice/Lattice_basis.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | 			   /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  | ||||||
|  | { | ||||||
|  |   // If assume basis[j] are already orthonormal, | ||||||
|  |   // can take all inner products in parallel saving 2x bandwidth | ||||||
|  |   // Save 3x bandwidth on the second line of loop. | ||||||
|  |   // perhaps 2.5x speed up. | ||||||
|  |   // 2x overall in Multigrid Lanczos   | ||||||
|  |   for(int j=0; j<k; ++j){ | ||||||
|  |     auto ip = innerProduct(basis[j],w); | ||||||
|  |     w = w - ip*basis[j]; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class VField, class Matrix> | ||||||
|  | void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)  | ||||||
|  | { | ||||||
|  |   typedef decltype(basis[0]) Field; | ||||||
|  |   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||||
|  |  | ||||||
|  |   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||||
|  |   typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj; | ||||||
|  |   typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t; | ||||||
|  |   GridBase* grid = basis[0].Grid(); | ||||||
|  |        | ||||||
|  |   for(int k=0;k<basis.size();k++){ | ||||||
|  |     basis_v.push_back(basis[k].View(AcceleratorWrite)); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | #if ( (!defined(GRID_CUDA)) ) | ||||||
|  |   int max_threads = thread_max(); | ||||||
|  |   Vector < vobj > Bt(Nm * max_threads); | ||||||
|  |   thread_region | ||||||
|  |     { | ||||||
|  |       vobj* B = &Bt[Nm * thread_num()]; | ||||||
|  |       thread_for_in_region(ss, grid->oSites(),{ | ||||||
|  | 	  for(int j=j0; j<j1; ++j) B[j]=0.; | ||||||
|  |        | ||||||
|  | 	  for(int j=j0; j<j1; ++j){ | ||||||
|  | 	    for(int k=k0; k<k1; ++k){ | ||||||
|  | 	      B[j] +=Qt(j,k) * basis_v[k][ss]; | ||||||
|  | 	    } | ||||||
|  | 	  } | ||||||
|  | 	  for(int j=j0; j<j1; ++j){ | ||||||
|  | 	    basis_v[j][ss] = B[j]; | ||||||
|  | 	  } | ||||||
|  | 	}); | ||||||
|  |     } | ||||||
|  | #else | ||||||
|  |   View *basis_vp = &basis_v[0]; | ||||||
|  |  | ||||||
|  |   int nrot = j1-j0; | ||||||
|  |   if (!nrot) // edge case not handled gracefully by Cuda | ||||||
|  |     return; | ||||||
|  |  | ||||||
|  |   uint64_t oSites   =grid->oSites(); | ||||||
|  |   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead | ||||||
|  |  | ||||||
|  |   Vector <vobj> Bt(siteBlock * nrot);  | ||||||
|  |   auto Bp=&Bt[0]; | ||||||
|  |  | ||||||
|  |   // GPU readable copy of matrix | ||||||
|  |   Vector<Coeff_t> Qt_jv(Nm*Nm); | ||||||
|  |   Coeff_t *Qt_p = & Qt_jv[0]; | ||||||
|  |   thread_for(i,Nm*Nm,{ | ||||||
|  |       int j = i/Nm; | ||||||
|  |       int k = i%Nm; | ||||||
|  |       Qt_p[i]=Qt(j,k); | ||||||
|  |   }); | ||||||
|  |  | ||||||
|  |   // Block the loop to keep storage footprint down | ||||||
|  |   for(uint64_t s=0;s<oSites;s+=siteBlock){ | ||||||
|  |  | ||||||
|  |     // remaining work in this block | ||||||
|  |     int ssites=MIN(siteBlock,oSites-s); | ||||||
|  |  | ||||||
|  |     // zero out the accumulators | ||||||
|  |     accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{ | ||||||
|  | 	decltype(coalescedRead(Bp[ss])) z; | ||||||
|  | 	z=Zero(); | ||||||
|  | 	coalescedWrite(Bp[ss],z); | ||||||
|  |       }); | ||||||
|  |  | ||||||
|  |     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||||
|  | 	 | ||||||
|  | 	int j =sj%nrot; | ||||||
|  | 	int jj  =j0+j; | ||||||
|  | 	int ss =sj/nrot; | ||||||
|  | 	int sss=ss+s; | ||||||
|  |  | ||||||
|  | 	for(int k=k0; k<k1; ++k){ | ||||||
|  | 	  auto tmp = coalescedRead(Bp[ss*nrot+j]); | ||||||
|  | 	  coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_vp[k][sss])); | ||||||
|  | 	} | ||||||
|  |       }); | ||||||
|  |  | ||||||
|  |     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||||
|  | 	int j =sj%nrot; | ||||||
|  | 	int jj  =j0+j; | ||||||
|  | 	int ss =sj/nrot; | ||||||
|  | 	int sss=ss+s; | ||||||
|  | 	coalescedWrite(basis_vp[jj][sss],coalescedRead(Bp[ss*nrot+j])); | ||||||
|  |       }); | ||||||
|  |   } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Extract a single rotated vector | ||||||
|  | template<class Field> | ||||||
|  | void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  | ||||||
|  | { | ||||||
|  |   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||||
|  |   typedef typename Field::vector_object vobj; | ||||||
|  |   GridBase* grid = basis[0].Grid(); | ||||||
|  |  | ||||||
|  |   result.Checkerboard() = basis[0].Checkerboard(); | ||||||
|  |  | ||||||
|  |   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||||
|  |   for(int k=0;k<basis.size();k++){ | ||||||
|  |     basis_v.push_back(basis[k].View(AcceleratorRead)); | ||||||
|  |   } | ||||||
|  |   vobj zz=Zero(); | ||||||
|  |   Vector<double> Qt_jv(Nm); | ||||||
|  |   double * Qt_j = & Qt_jv[0]; | ||||||
|  |   for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k); | ||||||
|  |  | ||||||
|  |   auto basis_vp=& basis_v[0]; | ||||||
|  |   autoView(result_v,result,AcceleratorWrite); | ||||||
|  |   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{ | ||||||
|  |     vobj zzz=Zero(); | ||||||
|  |     auto B=coalescedRead(zzz); | ||||||
|  |     for(int k=k0; k<k1; ++k){ | ||||||
|  |       B +=Qt_j[k] * coalescedRead(basis_vp[k][ss]); | ||||||
|  |     } | ||||||
|  |     coalescedWrite(result_v[ss], B); | ||||||
|  |   }); | ||||||
|  |   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  | ||||||
|  | { | ||||||
|  |   int vlen = idx.size(); | ||||||
|  |  | ||||||
|  |   assert(vlen>=1); | ||||||
|  |   assert(vlen<=sort_vals.size()); | ||||||
|  |   assert(vlen<=_v.size()); | ||||||
|  |  | ||||||
|  |   for (size_t i=0;i<vlen;i++) { | ||||||
|  |  | ||||||
|  |     if (idx[i] != i) { | ||||||
|  |  | ||||||
|  |       ////////////////////////////////////// | ||||||
|  |       // idx[i] is a table of desired sources giving a permutation. | ||||||
|  |       // Swap v[i] with v[idx[i]]. | ||||||
|  |       // Find  j>i for which _vnew[j] = _vold[i], | ||||||
|  |       // track the move idx[j] => idx[i] | ||||||
|  |       // track the move idx[i] => i | ||||||
|  |       ////////////////////////////////////// | ||||||
|  |       size_t j; | ||||||
|  |       for (j=i;j<idx.size();j++) | ||||||
|  | 	if (idx[j]==i) | ||||||
|  | 	  break; | ||||||
|  |  | ||||||
|  |       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); | ||||||
|  |  | ||||||
|  |       swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy | ||||||
|  |       std::swap(sort_vals[i],sort_vals[idx[i]]); | ||||||
|  |  | ||||||
|  |       idx[j] = idx[i]; | ||||||
|  |       idx[i] = i; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  | ||||||
|  | { | ||||||
|  |   std::vector<int> idx(sort_vals.size()); | ||||||
|  |   std::iota(idx.begin(), idx.end(), 0); | ||||||
|  |  | ||||||
|  |   // sort indexes based on comparing values in v | ||||||
|  |   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { | ||||||
|  |     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); | ||||||
|  |   }); | ||||||
|  |   return idx; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  | ||||||
|  | { | ||||||
|  |   std::vector<int> idx = basisSortGetIndex(sort_vals); | ||||||
|  |   if (reverse) | ||||||
|  |     std::reverse(idx.begin(), idx.end()); | ||||||
|  |    | ||||||
|  |   basisReorderInPlace(_v,sort_vals,idx); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // PAB: faster to compute the inner products first then fuse loops. | ||||||
|  | // If performance critical can improve. | ||||||
|  | template<class Field> | ||||||
|  | void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) { | ||||||
|  |   result = Zero(); | ||||||
|  |   assert(_v.size()==eval.size()); | ||||||
|  |   int N = (int)_v.size(); | ||||||
|  |   for (int i=0;i<N;i++) { | ||||||
|  |     Field& tmp = _v[i]; | ||||||
|  |     axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -42,34 +42,6 @@ NAMESPACE_BEGIN(Grid); | |||||||
|  |  | ||||||
| typedef iScalar<vInteger> vPredicate ; | typedef iScalar<vInteger> vPredicate ; | ||||||
|  |  | ||||||
| /* |  | ||||||
| template <class iobj, class vobj, class robj> accelerator_inline  |  | ||||||
| vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, const robj &iffalse)  |  | ||||||
| { |  | ||||||
|   typename std::remove_const<vobj>::type ret; |  | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_object scalar_object; |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |  | ||||||
|   typedef typename vobj::vector_type vector_type; |  | ||||||
|  |  | ||||||
|   const int Nsimd = vobj::vector_type::Nsimd(); |  | ||||||
|  |  | ||||||
|   ExtractBuffer<Integer> mask(Nsimd); |  | ||||||
|   ExtractBuffer<scalar_object> truevals(Nsimd); |  | ||||||
|   ExtractBuffer<scalar_object> falsevals(Nsimd); |  | ||||||
|  |  | ||||||
|   extract(iftrue, truevals); |  | ||||||
|   extract(iffalse, falsevals); |  | ||||||
|   extract<vInteger, Integer>(TensorRemove(predicate), mask); |  | ||||||
|  |  | ||||||
|   for (int s = 0; s < Nsimd; s++) { |  | ||||||
|     if (mask[s]) falsevals[s] = truevals[s]; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   merge(ret, falsevals); |  | ||||||
|   return ret; |  | ||||||
| } |  | ||||||
| */ |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // compare lattice to lattice | // compare lattice to lattice | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -78,9 +50,9 @@ template<class vfunctor,class lobj,class robj> | |||||||
| inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs) | inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs) | ||||||
| { | { | ||||||
|   Lattice<vPredicate> ret(rhs.Grid()); |   Lattice<vPredicate> ret(rhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, CpuRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v, rhs, CpuRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, CpuWrite); | ||||||
|   thread_for( ss, rhs_v.size(), { |   thread_for( ss, rhs_v.size(), { | ||||||
|       ret_v[ss]=op(lhs_v[ss],rhs_v[ss]); |       ret_v[ss]=op(lhs_v[ss],rhs_v[ss]); | ||||||
|   }); |   }); | ||||||
| @@ -93,8 +65,8 @@ template<class vfunctor,class lobj,class robj> | |||||||
| inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs) | inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs) | ||||||
| { | { | ||||||
|   Lattice<vPredicate> ret(lhs.Grid()); |   Lattice<vPredicate> ret(lhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, CpuRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, CpuWrite); | ||||||
|   thread_for( ss, lhs_v.size(), { |   thread_for( ss, lhs_v.size(), { | ||||||
|     ret_v[ss]=op(lhs_v[ss],rhs); |     ret_v[ss]=op(lhs_v[ss],rhs); | ||||||
|   }); |   }); | ||||||
| @@ -107,8 +79,8 @@ template<class vfunctor,class lobj,class robj> | |||||||
| inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs) | inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs) | ||||||
| { | { | ||||||
|   Lattice<vPredicate> ret(rhs.Grid()); |   Lattice<vPredicate> ret(rhs.Grid()); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v, rhs, CpuRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, CpuWrite); | ||||||
|   thread_for( ss, rhs_v.size(), { |   thread_for( ss, rhs_v.size(), { | ||||||
|     ret_v[ss]=op(lhs,rhs_v[ss]); |     ret_v[ss]=op(lhs,rhs_v[ss]); | ||||||
|   }); |   }); | ||||||
|   | |||||||
| @@ -37,7 +37,7 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | |||||||
|   GridBase *grid = l.Grid(); |   GridBase *grid = l.Grid(); | ||||||
|   int Nsimd = grid->iSites(); |   int Nsimd = grid->iSites(); | ||||||
|  |  | ||||||
|   auto l_v = l.View(); |   autoView(l_v, l, CpuWrite); | ||||||
|   thread_for( o, grid->oSites(), { |   thread_for( o, grid->oSites(), { | ||||||
|     vector_type vI; |     vector_type vI; | ||||||
|     Coordinate gcoor; |     Coordinate gcoor; | ||||||
| @@ -51,23 +51,5 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | |||||||
|   }); |   }); | ||||||
| }; | }; | ||||||
|  |  | ||||||
| // LatticeCoordinate(); |  | ||||||
| // FIXME for debug; deprecate this; made obscelete by  |  | ||||||
| template<class vobj> void lex_sites(Lattice<vobj> &l){ |  | ||||||
|   auto l_v = l.View(); |  | ||||||
|   Real *v_ptr = (Real *)&l_v[0]; |  | ||||||
|   size_t o_len = l.Grid()->oSites(); |  | ||||||
|   size_t v_len = sizeof(vobj)/sizeof(vRealF); |  | ||||||
|   size_t vec_len = vRealF::Nsimd(); |  | ||||||
|  |  | ||||||
|   for(int i=0;i<o_len;i++){ |  | ||||||
|     for(int j=0;j<v_len;j++){ |  | ||||||
|       for(int vv=0;vv<vec_len;vv+=2){ |  | ||||||
| 	v_ptr[i*v_len*vec_len+j*vec_len+vv  ]= i+vv*500; |  | ||||||
| 	v_ptr[i*v_len*vec_len+j*vec_len+vv+1]= i+vv*500; |  | ||||||
|       } |  | ||||||
|     }} |  | ||||||
| } |  | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|   | |||||||
| @@ -43,8 +43,8 @@ template<class vobj> | |||||||
| inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced> | inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced> | ||||||
| { | { | ||||||
|   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); |   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||||
|     coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss))); |     coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss))); | ||||||
|   }); |   }); | ||||||
| @@ -56,9 +56,9 @@ template<class vobj> | |||||||
| inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced> | inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced> | ||||||
| { | { | ||||||
|   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); |   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||||
|     coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss))); |     coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss))); | ||||||
|   }); |   }); | ||||||
| @@ -73,9 +73,9 @@ inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Latt | |||||||
|   typedef decltype(coalescedRead(ll())) sll; |   typedef decltype(coalescedRead(ll())) sll; | ||||||
|   typedef decltype(coalescedRead(rr())) srr; |   typedef decltype(coalescedRead(rr())) srr; | ||||||
|   Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid()); |   Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   accelerator_for(ss,rhs_v.size(),1,{ |   accelerator_for(ss,rhs_v.size(),1,{ | ||||||
|     // FIXME had issues with scalar version of outer  |     // FIXME had issues with scalar version of outer  | ||||||
|     // Use vector [] operator and don't read coalesce this loop |     // Use vector [] operator and don't read coalesce this loop | ||||||
|   | |||||||
| @@ -51,9 +51,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | |||||||
|   int block =FullGrid->_slice_block [Orthog]; |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|   auto X_v = X.View(); |   autoView( X_v , X, CpuRead); | ||||||
|   auto Y_v = Y.View(); |   autoView( Y_v , Y, CpuRead); | ||||||
|   auto R_v = R.View(); |   autoView( R_v , R, CpuWrite); | ||||||
|   thread_region |   thread_region | ||||||
|   { |   { | ||||||
|     std::vector<vobj> s_x(Nblock); |     std::vector<vobj> s_x(Nblock); | ||||||
| @@ -97,8 +97,8 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | |||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |  | ||||||
|   auto X_v = X.View(); |   autoView( X_v , X, CpuRead); | ||||||
|   auto R_v = R.View(); |   autoView( R_v , R, CpuWrite); | ||||||
|  |  | ||||||
|   thread_region |   thread_region | ||||||
|   { |   { | ||||||
| @@ -156,8 +156,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |  | ||||||
|   typedef typename vobj::vector_typeD vector_typeD; |   typedef typename vobj::vector_typeD vector_typeD; | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, CpuRead); | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v , rhs, CpuRead); | ||||||
|   thread_region { |   thread_region { | ||||||
|     std::vector<vobj> Left(Nblock); |     std::vector<vobj> Left(Nblock); | ||||||
|     std::vector<vobj> Right(Nblock); |     std::vector<vobj> Right(Nblock); | ||||||
|   | |||||||
| @@ -46,9 +46,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Ind | |||||||
| { | { | ||||||
|   Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid()); |   Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid()); | ||||||
|   ret.Checkerboard()=lhs.Checkerboard(); |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|   thread_for( ss, lhs_v.size(), { |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i); |     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| @@ -58,9 +58,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd | |||||||
| { | { | ||||||
|   Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid()); |   Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid()); | ||||||
|   ret.Checkerboard()=lhs.Checkerboard(); |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|   thread_for( ss, lhs_v.size(), { |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j); |     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| @@ -72,18 +72,18 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd | |||||||
| template<int Index,class vobj>   | template<int Index,class vobj>   | ||||||
| void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i) | void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i) | ||||||
| { | { | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v, rhs, AcceleratorRead); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|   thread_for( ss, lhs_v.size(), { |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i); |     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i); | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| template<int Index,class vobj>  | template<int Index,class vobj>  | ||||||
| void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j) | void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j) | ||||||
| { | { | ||||||
|   auto rhs_v = rhs.View(); |   autoView( rhs_v, rhs, AcceleratorRead); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|   thread_for( ss, lhs_v.size(), { |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j); |     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j); | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| @@ -111,7 +111,7 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){ | |||||||
|  |  | ||||||
|   // extract-modify-merge cycle is easiest way and this is not perf critical |   // extract-modify-merge cycle is easiest way and this is not perf critical | ||||||
|   ExtractBuffer<sobj> buf(Nsimd); |   ExtractBuffer<sobj> buf(Nsimd); | ||||||
|   auto l_v = l.View(); |   autoView( l_v , l, CpuWrite); | ||||||
|   if ( rank == grid->ThisRank() ) { |   if ( rank == grid->ThisRank() ) { | ||||||
|     extract(l_v[odx],buf); |     extract(l_v[odx],buf); | ||||||
|     buf[idx] = s; |     buf[idx] = s; | ||||||
| @@ -141,7 +141,7 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | |||||||
|   grid->GlobalCoorToRankIndex(rank,odx,idx,site); |   grid->GlobalCoorToRankIndex(rank,odx,idx,site); | ||||||
|  |  | ||||||
|   ExtractBuffer<sobj> buf(Nsimd); |   ExtractBuffer<sobj> buf(Nsimd); | ||||||
|   auto l_v = l.View(); |   autoView( l_v , l, CpuWrite); | ||||||
|   extract(l_v[odx],buf); |   extract(l_v[odx],buf); | ||||||
|  |  | ||||||
|   s = buf[idx]; |   s = buf[idx]; | ||||||
| @@ -151,21 +151,21 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | |||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
| // Peek a scalar object from the SIMD array | // Peek a scalar object from the SIMD array | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
|  | // Must be CPU read view | ||||||
| template<class vobj,class sobj> | template<class vobj,class sobj> | ||||||
| accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site){ | inline void peekLocalSite(sobj &s,const LatticeView<vobj> &l,Coordinate &site) | ||||||
|          | { | ||||||
|   GridBase *grid = l.Grid(); |   GridBase *grid = l.getGrid(); | ||||||
|  |   assert(l.mode==CpuRead); | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); |   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); |   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||||
|  |  | ||||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); |   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||||
| @@ -173,8 +173,7 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate | |||||||
|   idx= grid->iIndex(site); |   idx= grid->iIndex(site); | ||||||
|   odx= grid->oIndex(site); |   odx= grid->oIndex(site); | ||||||
|    |    | ||||||
|   auto l_v = l.View(); |   scalar_type * vp = (scalar_type *)&l[odx]; | ||||||
|   scalar_type * vp = (scalar_type *)&l_v[odx]; |  | ||||||
|   scalar_type * pt = (scalar_type *)&s; |   scalar_type * pt = (scalar_type *)&s; | ||||||
|        |        | ||||||
|   for(int w=0;w<words;w++){ |   for(int w=0;w<words;w++){ | ||||||
| @@ -183,18 +182,27 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate | |||||||
|        |        | ||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class vobj,class sobj> | template<class vobj,class sobj> | ||||||
| accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate &site){ | inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   autoView(lv,l,CpuRead); | ||||||
|  |   peekLocalSite(s,lv,site); | ||||||
|  |   return; | ||||||
|  | }; | ||||||
|  |  | ||||||
|   GridBase *grid=l.Grid(); | // Must be CPU write view | ||||||
|  | template<class vobj,class sobj> | ||||||
|  | inline void pokeLocalSite(const sobj &s,LatticeView<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   GridBase *grid=l.getGrid(); | ||||||
|  |   assert(l.mode==CpuWrite); | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); |   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); |   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||||
|  |  | ||||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); |   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||||
| @@ -202,13 +210,19 @@ accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate | |||||||
|   idx= grid->iIndex(site); |   idx= grid->iIndex(site); | ||||||
|   odx= grid->oIndex(site); |   odx= grid->oIndex(site); | ||||||
|  |  | ||||||
|   auto l_v = l.View(); |   scalar_type * vp = (scalar_type *)&l[odx]; | ||||||
|   scalar_type * vp = (scalar_type *)&l_v[odx]; |  | ||||||
|   scalar_type * pt = (scalar_type *)&s; |   scalar_type * pt = (scalar_type *)&s; | ||||||
|   for(int w=0;w<words;w++){ |   for(int w=0;w<words;w++){ | ||||||
|     vp[idx+w*Nsimd] = pt[w]; |     vp[idx+w*Nsimd] = pt[w]; | ||||||
|   } |   } | ||||||
|  |   return; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class vobj,class sobj> | ||||||
|  | inline void pokeLocalSite(const sobj &s, Lattice<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   autoView(lv,l,CpuWrite); | ||||||
|  |   pokeLocalSite(s,lv,site); | ||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,79 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/lattice/Lattice_reality.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: neo <cossu@post.kek.jp> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_LATTICE_REAL_IMAG_H | ||||||
|  | #define GRID_LATTICE_REAL_IMAG_H | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // FIXME .. this is the sector of the code  | ||||||
|  | // I am most worried about the directions | ||||||
|  | // The choice of burying complex in the SIMD | ||||||
|  | // is making the use of "real" and "imag" very cumbersome | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class vobj> inline Lattice<vobj> real(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] =real(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  | template<class vobj> inline Lattice<vobj> imag(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] =imag(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  |   auto real(const Expression &expr) -> decltype(real(closure(expr)))		 | ||||||
|  | {									 | ||||||
|  |   return real(closure(expr));					 | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  |   auto imag(const Expression &expr) -> decltype(imag(closure(expr)))		 | ||||||
|  | {									 | ||||||
|  |   return imag(closure(expr));					 | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -40,24 +40,77 @@ NAMESPACE_BEGIN(Grid); | |||||||
|  |  | ||||||
| template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){ | template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){ | ||||||
|   Lattice<vobj> ret(lhs.Grid()); |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |  | ||||||
|   auto ret_v = ret.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|     coalescedWrite(ret_v[ss], adj(lhs_v(ss))); |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |      ret_v[ss] = adj(lhs_v[ss]); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){ | template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){ | ||||||
|   Lattice<vobj> ret(lhs.Grid()); |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|   auto lhs_v = lhs.View(); |  | ||||||
|   auto ret_v = ret.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { |   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||||
|     coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss))); |     coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss))); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class vobj> inline Lattice<typename vobj::Complexified> toComplex(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<typename vobj::Complexified> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = toComplex(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  | template<class vobj> inline Lattice<typename vobj::Realified> toReal(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<typename vobj::Realified> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = toReal(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto toComplex(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return toComplex(closure(expr)); | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto toReal(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return toReal(closure(expr)); | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto adj(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return adj(closure(expr)); | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto conjugate(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return conjugate(closure(expr)); | ||||||
|  | } | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -5,6 +5,7 @@ | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
|     the Free Software Foundation; either version 2 of the License, or |     the Free Software Foundation; either version 2 of the License, or | ||||||
| @@ -24,7 +25,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/Grid_Eigen_Dense.h> | #include <Grid/Grid_Eigen_Dense.h> | ||||||
|  |  | ||||||
|  |  | ||||||
| #ifdef GRID_NVCC | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
| #include <Grid/lattice/Lattice_reduction_gpu.h> | #include <Grid/lattice/Lattice_reduction_gpu.h> | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
| @@ -38,7 +39,36 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites) | |||||||
| { | { | ||||||
|   typedef typename vobj::scalar_object  sobj; |   typedef typename vobj::scalar_object  sobj; | ||||||
|  |  | ||||||
|   const int Nsimd = vobj::Nsimd(); |   //  const int Nsimd = vobj::Nsimd(); | ||||||
|  |   const int nthread = GridThread::GetThreads(); | ||||||
|  |  | ||||||
|  |   Vector<sobj> sumarray(nthread); | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     sumarray[i]=Zero(); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   thread_for(thr,nthread, { | ||||||
|  |     int nwork, mywork, myoff; | ||||||
|  |     nwork = osites; | ||||||
|  |     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||||
|  |     vobj vvsum=Zero(); | ||||||
|  |     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||||
|  |       vvsum = vvsum + arg[ss]; | ||||||
|  |     } | ||||||
|  |     sumarray[thr]=Reduce(vvsum); | ||||||
|  |   }); | ||||||
|  |    | ||||||
|  |   sobj ssum=Zero();  // sum across threads | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     ssum = ssum+sumarray[i]; | ||||||
|  |   }  | ||||||
|  |   return ssum; | ||||||
|  | } | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_objectD  sobj; | ||||||
|  |  | ||||||
|   const int nthread = GridThread::GetThreads(); |   const int nthread = GridThread::GetThreads(); | ||||||
|  |  | ||||||
|   Vector<sobj> sumarray(nthread); |   Vector<sobj> sumarray(nthread); | ||||||
| @@ -62,23 +92,69 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites) | |||||||
|     ssum = ssum+sumarray[i]; |     ssum = ssum+sumarray[i]; | ||||||
|   }  |   }  | ||||||
|    |    | ||||||
|   return ssum; |   typedef typename vobj::scalar_object ssobj; | ||||||
|  |   ssobj ret = ssum; | ||||||
|  |   return ret; | ||||||
| } | } | ||||||
|  | /* | ||||||
|  | Threaded max, don't use for now | ||||||
|  | template<class Double> | ||||||
|  | inline Double max(const Double *arg, Integer osites) | ||||||
|  | { | ||||||
|  |   //  const int Nsimd = vobj::Nsimd(); | ||||||
|  |   const int nthread = GridThread::GetThreads(); | ||||||
|  |  | ||||||
|  |   std::vector<Double> maxarray(nthread); | ||||||
|  |    | ||||||
|  |   thread_for(thr,nthread, { | ||||||
|  |     int nwork, mywork, myoff; | ||||||
|  |     nwork = osites; | ||||||
|  |     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||||
|  |     Double max=arg[0]; | ||||||
|  |     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||||
|  |       if( arg[ss] > max ) max = arg[ss]; | ||||||
|  |     } | ||||||
|  |     maxarray[thr]=max; | ||||||
|  |   }); | ||||||
|  |    | ||||||
|  |   Double tmax=maxarray[0]; | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     if (maxarray[i]>tmax) tmax = maxarray[i]; | ||||||
|  |   }  | ||||||
|  |   return tmax; | ||||||
|  | } | ||||||
|  | */ | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline typename vobj::scalar_object sum(const vobj *arg, Integer osites) | inline typename vobj::scalar_object sum(const vobj *arg, Integer osites) | ||||||
| { | { | ||||||
| #ifdef GRID_NVCC | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|   return sum_gpu(arg,osites); |   return sum_gpu(arg,osites); | ||||||
| #else | #else | ||||||
|   return sum_cpu(arg,osites); |   return sum_cpu(arg,osites); | ||||||
| #endif   | #endif   | ||||||
| } | } | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_objectD sumD(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|  |   return sumD_gpu(arg,osites); | ||||||
|  | #else | ||||||
|  |   return sumD_cpu(arg,osites); | ||||||
|  | #endif   | ||||||
|  | } | ||||||
|  |  | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline typename vobj::scalar_object sum(const Lattice<vobj> &arg) | inline typename vobj::scalar_object sum(const Lattice<vobj> &arg) | ||||||
| { | { | ||||||
|   auto arg_v = arg.View(); | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|  |   autoView( arg_v, arg, AcceleratorRead); | ||||||
|   Integer osites = arg.Grid()->oSites(); |   Integer osites = arg.Grid()->oSites(); | ||||||
|   auto ssum= sum(&arg_v[0],osites); |   auto ssum= sum_gpu(&arg_v[0],osites); | ||||||
|  | #else | ||||||
|  |   autoView(arg_v, arg, CpuRead); | ||||||
|  |   Integer osites = arg.Grid()->oSites(); | ||||||
|  |   auto ssum= sum_cpu(&arg_v[0],osites); | ||||||
|  | #endif   | ||||||
|   arg.Grid()->GlobalSum(ssum); |   arg.Grid()->GlobalSum(ssum); | ||||||
|   return ssum; |   return ssum; | ||||||
| } | } | ||||||
| @@ -91,9 +167,35 @@ template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){ | |||||||
|   return real(nrm);  |   return real(nrm);  | ||||||
| } | } | ||||||
|  |  | ||||||
|  | //The global maximum of the site norm2 | ||||||
|  | template<class vobj> inline RealD maxLocalNorm2(const Lattice<vobj> &arg) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::tensor_reduced vscalar;  //iScalar<iScalar<.... <vPODtype> > > | ||||||
|  |   typedef typename vscalar::scalar_object  scalar;   //iScalar<iScalar<.... <PODtype> > > | ||||||
|  |  | ||||||
|  |   Lattice<vscalar> inner = localNorm2(arg); | ||||||
|  |  | ||||||
|  |   auto grid = arg.Grid(); | ||||||
|  |  | ||||||
|  |   RealD max; | ||||||
|  |   for(int l=0;l<grid->lSites();l++){ | ||||||
|  |     Coordinate coor; | ||||||
|  |     scalar val; | ||||||
|  |     RealD r; | ||||||
|  |     grid->LocalIndexToLocalCoor(l,coor); | ||||||
|  |     peekLocalSite(val,inner,coor); | ||||||
|  |     r=real(TensorRemove(val)); | ||||||
|  |     if( (l==0) || (r>max)){ | ||||||
|  |       max=r; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   grid->GlobalMax(max); | ||||||
|  |   return max; | ||||||
|  | } | ||||||
|  |  | ||||||
| // Double inner product | // Double inner product | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | inline ComplexD rankInnerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||||
| { | { | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_typeD vector_type; |   typedef typename vobj::vector_typeD vector_type; | ||||||
| @@ -101,47 +203,41 @@ inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &righ | |||||||
|    |    | ||||||
|   GridBase *grid = left.Grid(); |   GridBase *grid = left.Grid(); | ||||||
|  |  | ||||||
|   // Might make all code paths go this way. |  | ||||||
|   auto left_v = left.View(); |  | ||||||
|   auto right_v=right.View(); |  | ||||||
|  |  | ||||||
|   const uint64_t nsimd = grid->Nsimd(); |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|   const uint64_t sites = grid->oSites(); |   const uint64_t sites = grid->oSites(); | ||||||
|    |    | ||||||
| #ifdef GRID_NVCC |   // Might make all code paths go this way. | ||||||
|   // GPU - SIMT lane compliance... |   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||||
|   typedef decltype(innerProduct(left_v[0],right_v[0])) inner_t; |  | ||||||
|   Vector<inner_t> inner_tmp(sites); |   Vector<inner_t> inner_tmp(sites); | ||||||
|   auto inner_tmp_v = &inner_tmp[0]; |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|      |      | ||||||
|  |   { | ||||||
|  |     autoView( left_v , left, AcceleratorRead); | ||||||
|  |     autoView( right_v,right, AcceleratorRead); | ||||||
|  |  | ||||||
|   accelerator_for( ss, sites, nsimd,{ |     // GPU - SIMT lane compliance... | ||||||
|       auto x_l = left_v(ss); |     accelerator_for( ss, sites, 1,{ | ||||||
|       auto y_l = right_v(ss); | 	auto x_l = left_v[ss]; | ||||||
|       coalescedWrite(inner_tmp_v[ss],innerProduct(x_l,y_l)); | 	auto y_l = right_v[ss]; | ||||||
|   }) | 	inner_tmp_v[ss]=innerProductD(x_l,y_l); | ||||||
|  |     }); | ||||||
|  |   } | ||||||
|  |  | ||||||
|   // This is in single precision and fails some tests |   // This is in single precision and fails some tests | ||||||
|   // Need a sumD that sums in double |   auto anrm = sum(inner_tmp_v,sites);   | ||||||
|   nrm = TensorRemove(sumD_gpu(inner_tmp_v,sites));   |   nrm = anrm; | ||||||
| #else |  | ||||||
|   // CPU  |  | ||||||
|   typedef decltype(innerProductD(left_v[0],right_v[0])) inner_t; |  | ||||||
|   Vector<inner_t> inner_tmp(sites); |  | ||||||
|   auto inner_tmp_v = &inner_tmp[0]; |  | ||||||
|    |  | ||||||
|   accelerator_for( ss, sites, nsimd,{ |  | ||||||
|       auto x_l = left_v[ss]; |  | ||||||
|       auto y_l = right_v[ss]; |  | ||||||
|       inner_tmp_v[ss]=innerProductD(x_l,y_l); |  | ||||||
|   }) |  | ||||||
|   nrm = TensorRemove(sum(inner_tmp_v,sites)); |  | ||||||
| #endif |  | ||||||
|   grid->GlobalSum(nrm); |  | ||||||
|  |  | ||||||
|   return nrm; |   return nrm; | ||||||
| } | } | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) { | ||||||
|  |   GridBase *grid = left.Grid(); | ||||||
|  |   ComplexD nrm = rankInnerProduct(left,right); | ||||||
|  |   grid->GlobalSum(nrm); | ||||||
|  |   return nrm; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
| ///////////////////////// | ///////////////////////// | ||||||
| // Fast axpby_norm | // Fast axpby_norm | ||||||
| // z = a x + b y | // z = a x + b y | ||||||
| @@ -167,44 +263,66 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt | |||||||
|    |    | ||||||
|   GridBase *grid = x.Grid(); |   GridBase *grid = x.Grid(); | ||||||
|  |  | ||||||
|   auto x_v=x.View(); |  | ||||||
|   auto y_v=y.View(); |  | ||||||
|   auto z_v=z.View(); |  | ||||||
|  |  | ||||||
|   const uint64_t nsimd = grid->Nsimd(); |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|   const uint64_t sites = grid->oSites(); |   const uint64_t sites = grid->oSites(); | ||||||
|    |    | ||||||
| #ifdef GRID_NVCC |  | ||||||
|   // GPU |   // GPU | ||||||
|   typedef decltype(innerProduct(x_v[0],y_v[0])) inner_t; |   autoView( x_v, x, AcceleratorRead); | ||||||
|   Vector<inner_t> inner_tmp(sites); |   autoView( y_v, y, AcceleratorRead); | ||||||
|   auto inner_tmp_v = &inner_tmp[0]; |   autoView( z_v, z, AcceleratorWrite); | ||||||
|  |  | ||||||
|   accelerator_for( ss, sites, nsimd,{ |  | ||||||
|       auto tmp = a*x_v(ss)+b*y_v(ss); |  | ||||||
|       coalescedWrite(inner_tmp_v[ss],innerProduct(tmp,tmp)); |  | ||||||
|       coalescedWrite(z_v[ss],tmp); |  | ||||||
|   }); |  | ||||||
|  |  | ||||||
|   nrm = real(TensorRemove(sumD_gpu(inner_tmp_v,sites))); |  | ||||||
| #else |  | ||||||
|   // CPU  |  | ||||||
|   typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t; |   typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t; | ||||||
|   Vector<inner_t> inner_tmp(sites); |   Vector<inner_t> inner_tmp(sites); | ||||||
|   auto inner_tmp_v = &inner_tmp[0]; |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|  |  | ||||||
|   accelerator_for( ss, sites, nsimd,{ |   accelerator_for( ss, sites, 1,{ | ||||||
|       auto tmp = a*x_v(ss)+b*y_v(ss); |       auto tmp = a*x_v[ss]+b*y_v[ss]; | ||||||
|       inner_tmp_v[ss]=innerProductD(tmp,tmp); |       inner_tmp_v[ss]=innerProductD(tmp,tmp); | ||||||
|       z_v[ss]=tmp; |       z_v[ss]=tmp; | ||||||
|   }); |   }); | ||||||
|   // Already promoted to double |  | ||||||
|   nrm = real(TensorRemove(sum(inner_tmp_v,sites))); |   nrm = real(TensorRemove(sum(inner_tmp_v,sites))); | ||||||
| #endif |  | ||||||
|   grid->GlobalSum(nrm); |   grid->GlobalSum(nrm); | ||||||
|   return nrm;  |   return nrm;  | ||||||
| } | } | ||||||
|   |   | ||||||
|  | template<class vobj> strong_inline void | ||||||
|  | innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||||
|  | { | ||||||
|  |   conformable(left,right); | ||||||
|  |  | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |   typedef typename vobj::vector_typeD vector_type; | ||||||
|  |   Vector<ComplexD> tmp(2); | ||||||
|  |  | ||||||
|  |   GridBase *grid = left.Grid(); | ||||||
|  |  | ||||||
|  |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|  |   const uint64_t sites = grid->oSites(); | ||||||
|  |  | ||||||
|  |   // GPU | ||||||
|  |   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||||
|  |   typedef decltype(innerProductD(vobj(),vobj())) norm_t; | ||||||
|  |   Vector<inner_t> inner_tmp(sites); | ||||||
|  |   Vector<norm_t>  norm_tmp(sites); | ||||||
|  |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|  |   auto norm_tmp_v = &norm_tmp[0]; | ||||||
|  |   { | ||||||
|  |     autoView(left_v,left, AcceleratorRead); | ||||||
|  |     autoView(right_v,right,AcceleratorRead); | ||||||
|  |     accelerator_for( ss, sites, 1,{ | ||||||
|  | 	auto left_tmp = left_v[ss]; | ||||||
|  | 	inner_tmp_v[ss]=innerProductD(left_tmp,right_v[ss]); | ||||||
|  |         norm_tmp_v [ss]=innerProductD(left_tmp,left_tmp); | ||||||
|  |       }); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   tmp[0] = TensorRemove(sum(inner_tmp_v,sites)); | ||||||
|  |   tmp[1] = TensorRemove(sum(norm_tmp_v,sites)); | ||||||
|  |  | ||||||
|  |   grid->GlobalSumVector(&tmp[0],2); // keep norm Complex -> can use GlobalSumVector | ||||||
|  |   ip = tmp[0]; | ||||||
|  |   nrm = real(tmp[1]); | ||||||
|  | } | ||||||
|  |  | ||||||
| template<class Op,class T1> | template<class Op,class T1> | ||||||
| inline auto sum(const LatticeUnaryExpression<Op,T1> & expr) | inline auto sum(const LatticeUnaryExpression<Op,T1> & expr) | ||||||
| @@ -243,6 +361,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|   // But easily avoided by using double precision fields |   // But easily avoided by using double precision fields | ||||||
|   /////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////// | ||||||
|   typedef typename vobj::scalar_object sobj; |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   typedef typename vobj::scalar_object::scalar_type scalar_type; | ||||||
|   GridBase  *grid = Data.Grid(); |   GridBase  *grid = Data.Grid(); | ||||||
|   assert(grid!=NULL); |   assert(grid!=NULL); | ||||||
|  |  | ||||||
| @@ -271,7 +390,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|  |  | ||||||
|   // sum over reduced dimension planes, breaking out orthog dir |   // sum over reduced dimension planes, breaking out orthog dir | ||||||
|   // Parallel over orthog direction |   // Parallel over orthog direction | ||||||
|   auto Data_v=Data.View(); |   autoView( Data_v, Data, CpuRead); | ||||||
|   thread_for( r,rd, { |   thread_for( r,rd, { | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
| @@ -301,20 +420,19 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|   } |   } | ||||||
|    |    | ||||||
|   // sum over nodes. |   // sum over nodes. | ||||||
|   sobj gsum; |  | ||||||
|   for(int t=0;t<fd;t++){ |   for(int t=0;t<fd;t++){ | ||||||
|     int pt = t/ld; // processor plane |     int pt = t/ld; // processor plane | ||||||
|     int lt = t%ld; |     int lt = t%ld; | ||||||
|     if ( pt == grid->_processor_coor[orthogdim] ) { |     if ( pt == grid->_processor_coor[orthogdim] ) { | ||||||
|       gsum=lsSum[lt]; |       result[t]=lsSum[lt]; | ||||||
|     } else { |     } else { | ||||||
|       gsum=Zero(); |       result[t]=Zero(); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     grid->GlobalSum(gsum); |  | ||||||
|  |  | ||||||
|     result[t]=gsum; |  | ||||||
|   } |   } | ||||||
|  |   scalar_type * ptr = (scalar_type *) &result[0]; | ||||||
|  |   int words = fd*sizeof(sobj)/sizeof(scalar_type); | ||||||
|  |   grid->GlobalSumVector(ptr, words); | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj> | template<class vobj> | ||||||
| @@ -349,8 +467,8 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti | |||||||
|   int e2=    grid->_slice_block [orthogdim]; |   int e2=    grid->_slice_block [orthogdim]; | ||||||
|   int stride=grid->_slice_stride[orthogdim]; |   int stride=grid->_slice_stride[orthogdim]; | ||||||
|  |  | ||||||
|   auto lhv=lhs.View(); |   autoView( lhv, lhs, CpuRead); | ||||||
|   auto rhv=rhs.View(); |   autoView( rhv, rhs, CpuRead); | ||||||
|   thread_for( r,rd,{ |   thread_for( r,rd,{ | ||||||
|  |  | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||||
| @@ -457,14 +575,12 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice | |||||||
|  |  | ||||||
|     tensor_reduced at; at=av; |     tensor_reduced at; at=av; | ||||||
|  |  | ||||||
|     auto Rv=R.View(); |     autoView( Rv, R, CpuWrite); | ||||||
|     auto Xv=X.View(); |     autoView( Xv, X, CpuRead); | ||||||
|     auto Yv=Y.View(); |     autoView( Yv, Y, CpuRead); | ||||||
|     thread_for_collapse(2, n, e1, { |     thread_for2d( n, e1, b,e2, { | ||||||
|       for(int b=0;b<e2;b++){ |  | ||||||
| 	int ss= so+n*stride+b; | 	int ss= so+n*stride+b; | ||||||
| 	Rv[ss] = at*Xv[ss]+Yv[ss]; | 	Rv[ss] = at*Xv[ss]+Yv[ss]; | ||||||
|       } |  | ||||||
|     }); |     }); | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| @@ -517,9 +633,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | |||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |  | ||||||
|   auto X_v=X.View(); |   autoView( X_v, X, CpuRead); | ||||||
|   auto Y_v=Y.View(); |   autoView( Y_v, Y, CpuRead); | ||||||
|   auto R_v=R.View(); |   autoView( R_v, R, CpuWrite); | ||||||
|   thread_region |   thread_region | ||||||
|   { |   { | ||||||
|     Vector<vobj> s_x(Nblock); |     Vector<vobj> s_x(Nblock); | ||||||
| @@ -564,13 +680,14 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | |||||||
|   //  int nl=1; |   //  int nl=1; | ||||||
|  |  | ||||||
|   //FIXME package in a convenient iterator |   //FIXME package in a convenient iterator | ||||||
|  |   // thread_for2d_in_region | ||||||
|   //Should loop over a plane orthogonal to direction "Orthog" |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
|   int stride=FullGrid->_slice_stride[Orthog]; |   int stride=FullGrid->_slice_stride[Orthog]; | ||||||
|   int block =FullGrid->_slice_block [Orthog]; |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|   auto R_v = R.View(); |   autoView( R_v, R, CpuWrite); | ||||||
|   auto X_v = X.View(); |   autoView( X_v, X, CpuRead); | ||||||
|   thread_region |   thread_region | ||||||
|   { |   { | ||||||
|     std::vector<vobj> s_x(Nblock); |     std::vector<vobj> s_x(Nblock); | ||||||
| @@ -628,8 +745,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|  |  | ||||||
|   typedef typename vobj::vector_typeD vector_typeD; |   typedef typename vobj::vector_typeD vector_typeD; | ||||||
|  |  | ||||||
|   auto lhs_v=lhs.View(); |   autoView( lhs_v, lhs, CpuRead); | ||||||
|   auto rhs_v=rhs.View(); |   autoView( rhs_v, rhs, CpuRead); | ||||||
|   thread_region |   thread_region | ||||||
|   { |   { | ||||||
|     std::vector<vobj> Left(Nblock); |     std::vector<vobj> Left(Nblock); | ||||||
|   | |||||||
| @@ -1,7 +1,14 @@ | |||||||
| NAMESPACE_BEGIN(Grid); | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| #define WARP_SIZE 32 | #ifdef GRID_HIP | ||||||
|  | extern hipDeviceProp_t *gpu_props; | ||||||
|  | #define WARP_SIZE 64 | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_CUDA | ||||||
| extern cudaDeviceProp *gpu_props; | extern cudaDeviceProp *gpu_props; | ||||||
|  | #define WARP_SIZE 32 | ||||||
|  | #endif | ||||||
|  |  | ||||||
| __device__ unsigned int retirementCount = 0; | __device__ unsigned int retirementCount = 0; | ||||||
|  |  | ||||||
| template <class Iterator> | template <class Iterator> | ||||||
| @@ -19,7 +26,12 @@ template <class Iterator> | |||||||
| void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) { | void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) { | ||||||
|    |    | ||||||
|   int device; |   int device; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|   cudaGetDevice(&device); |   cudaGetDevice(&device); | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   hipGetDevice(&device); | ||||||
|  | #endif | ||||||
|    |    | ||||||
|   Iterator warpSize            = gpu_props[device].warpSize; |   Iterator warpSize            = gpu_props[device].warpSize; | ||||||
|   Iterator sharedMemPerBlock   = gpu_props[device].sharedMemPerBlock; |   Iterator sharedMemPerBlock   = gpu_props[device].sharedMemPerBlock; | ||||||
| @@ -53,7 +65,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | |||||||
|    |    | ||||||
|   // cannot use overloaded operators for sobj as they are not volatile-qualified |   // cannot use overloaded operators for sobj as they are not volatile-qualified | ||||||
|   memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj)); |   memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj)); | ||||||
|   __syncwarp(); |   acceleratorSynchronise(); | ||||||
|    |    | ||||||
|   const Iterator VEC = WARP_SIZE; |   const Iterator VEC = WARP_SIZE; | ||||||
|   const Iterator vid = tid & (VEC-1); |   const Iterator vid = tid & (VEC-1); | ||||||
| @@ -67,9 +79,9 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | |||||||
|       beta += temp; |       beta += temp; | ||||||
|       memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj)); |       memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj)); | ||||||
|     } |     } | ||||||
|     __syncwarp(); |     acceleratorSynchronise(); | ||||||
|   } |   } | ||||||
|   __syncthreads(); |   acceleratorSynchroniseAll(); | ||||||
|    |    | ||||||
|   if (threadIdx.x == 0) { |   if (threadIdx.x == 0) { | ||||||
|     beta  = Zero(); |     beta  = Zero(); | ||||||
| @@ -79,7 +91,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | |||||||
|     } |     } | ||||||
|     memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj)); |     memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj)); | ||||||
|   } |   } | ||||||
|   __syncthreads(); |   acceleratorSynchroniseAll(); | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
| @@ -147,7 +159,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | |||||||
|     sobj *smem = (sobj *)shmem_pointer; |     sobj *smem = (sobj *)shmem_pointer; | ||||||
|      |      | ||||||
|     // wait until all outstanding memory instructions in this thread are finished |     // wait until all outstanding memory instructions in this thread are finished | ||||||
|     __threadfence(); |     acceleratorFence(); | ||||||
|      |      | ||||||
|     if (tid==0) { |     if (tid==0) { | ||||||
|       unsigned int ticket = atomicInc(&retirementCount, gridDim.x); |       unsigned int ticket = atomicInc(&retirementCount, gridDim.x); | ||||||
| @@ -156,7 +168,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | |||||||
|     } |     } | ||||||
|      |      | ||||||
|     // each thread must read the correct value of amLast |     // each thread must read the correct value of amLast | ||||||
|     __syncthreads(); |     acceleratorSynchroniseAll(); | ||||||
|  |  | ||||||
|     if (amLast) { |     if (amLast) { | ||||||
|       // reduce buffer[0], ..., buffer[gridDim.x-1] |       // reduce buffer[0], ..., buffer[gridDim.x-1] | ||||||
| @@ -199,13 +211,7 @@ inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites) | |||||||
|   sobj *buffer_v = &buffer[0]; |   sobj *buffer_v = &buffer[0]; | ||||||
|    |    | ||||||
|   reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size); |   reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size); | ||||||
|   cudaDeviceSynchronize(); |   accelerator_barrier(); | ||||||
|    |  | ||||||
|   cudaError err = cudaGetLastError(); |  | ||||||
|   if ( cudaSuccess != err ) { |  | ||||||
|     printf("Cuda error %s\n",cudaGetErrorString( err )); |  | ||||||
|     exit(0); |  | ||||||
|   } |  | ||||||
|   auto result = buffer_v[0]; |   auto result = buffer_v[0]; | ||||||
|   return result; |   return result; | ||||||
| } | } | ||||||
|   | |||||||
| @@ -375,7 +375,7 @@ public: | |||||||
|     int osites = _grid->oSites();  // guaranteed to be <= l.Grid()->oSites() by a factor multiplicity |     int osites = _grid->oSites();  // guaranteed to be <= l.Grid()->oSites() by a factor multiplicity | ||||||
|     int words  = sizeof(scalar_object) / sizeof(scalar_type); |     int words  = sizeof(scalar_object) / sizeof(scalar_type); | ||||||
|  |  | ||||||
|     auto l_v = l.View(); |     autoView(l_v, l, CpuWrite); | ||||||
|     thread_for( ss, osites, { |     thread_for( ss, osites, { | ||||||
|       ExtractBuffer<scalar_object> buf(Nsimd); |       ExtractBuffer<scalar_object> buf(Nsimd); | ||||||
|       for (int m = 0; m < multiplicity; m++) {  // Draw from same generator multiplicity times |       for (int m = 0; m < multiplicity; m++) {  // Draw from same generator multiplicity times | ||||||
| @@ -462,7 +462,7 @@ public: | |||||||
|  |  | ||||||
|     { |     { | ||||||
|       // Obtain one reseeded generator per thread       |       // Obtain one reseeded generator per thread       | ||||||
|       int Nthread = GridThread::GetThreads(); |       int Nthread = 32; // Hardwire a good level or parallelism | ||||||
|       std::vector<RngEngine> seeders(Nthread); |       std::vector<RngEngine> seeders(Nthread); | ||||||
|       for(int t=0;t<Nthread;t++){ |       for(int t=0;t<Nthread;t++){ | ||||||
| 	seeders[t] = Reseed(master_engine); | 	seeders[t] = Reseed(master_engine); | ||||||
|   | |||||||
| @@ -37,17 +37,19 @@ NAMESPACE_BEGIN(Grid); | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Trace | // Trace | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | /* | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline auto trace(const Lattice<vobj> &lhs)  -> Lattice<decltype(trace(vobj()))> | inline auto trace(const Lattice<vobj> &lhs)  -> Lattice<decltype(trace(vobj()))> | ||||||
| { | { | ||||||
|   Lattice<decltype(trace(vobj()))> ret(lhs.Grid()); |   Lattice<decltype(trace(vobj()))> ret(lhs.Grid()); | ||||||
|   auto ret_v = ret.View(); |   autoView(ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView(lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { |   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||||
|     coalescedWrite(ret_v[ss], trace(lhs_v(ss))); |     coalescedWrite(ret_v[ss], trace(lhs_v(ss))); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  | */ | ||||||
|      |      | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Trace Index level dependent operation | // Trace Index level dependent operation | ||||||
| @@ -56,8 +58,8 @@ template<int Index,class vobj> | |||||||
| inline auto TraceIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(traceIndex<Index>(vobj()))> | inline auto TraceIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(traceIndex<Index>(vobj()))> | ||||||
| { | { | ||||||
|   Lattice<decltype(traceIndex<Index>(vobj()))> ret(lhs.Grid()); |   Lattice<decltype(traceIndex<Index>(vobj()))> ret(lhs.Grid()); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { |   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||||
|     coalescedWrite(ret_v[ss], traceIndex<Index>(lhs_v(ss))); |     coalescedWrite(ret_v[ss], traceIndex<Index>(lhs_v(ss))); | ||||||
|   }); |   }); | ||||||
|   | |||||||
| @@ -6,6 +6,7 @@ | |||||||
|     Copyright (C) 2015 |     Copyright (C) 2015 | ||||||
|  |  | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
| @@ -46,11 +47,12 @@ inline void subdivides(GridBase *coarse,GridBase *fine) | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // remove and insert a half checkerboard | // remove and insert a half checkerboard | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full){ | template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full) | ||||||
|  | { | ||||||
|   half.Checkerboard() = cb; |   half.Checkerboard() = cb; | ||||||
|  |  | ||||||
|   auto half_v = half.View(); |   autoView( half_v, half, CpuWrite); | ||||||
|   auto full_v = full.View(); |   autoView( full_v, full, CpuRead); | ||||||
|   thread_for(ss, full.Grid()->oSites(),{ |   thread_for(ss, full.Grid()->oSites(),{ | ||||||
|     int cbos; |     int cbos; | ||||||
|     Coordinate coor; |     Coordinate coor; | ||||||
| @@ -63,10 +65,11 @@ template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,con | |||||||
|     } |     } | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half){ | template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half) | ||||||
|  | { | ||||||
|   int cb = half.Checkerboard(); |   int cb = half.Checkerboard(); | ||||||
|   auto half_v = half.View(); |   autoView( half_v , half, CpuRead); | ||||||
|   auto full_v = full.View(); |   autoView( full_v , full, CpuWrite); | ||||||
|   thread_for(ss,full.Grid()->oSites(),{ |   thread_for(ss,full.Grid()->oSites(),{ | ||||||
|  |  | ||||||
|     Coordinate coor; |     Coordinate coor; | ||||||
| @@ -82,95 +85,146 @@ template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Latti | |||||||
|   }); |   }); | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex,int nbasis> | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData, | // Flexible Type Conversion for internal promotion to double as well as graceful | ||||||
| 			  const             Lattice<vobj>   &fineData, | // treatment of scalar-compatible types | ||||||
| 			  const std::vector<Lattice<vobj> > &Basis) | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| { | accelerator_inline void convertType(ComplexD & out, const std::complex<double> & in) { | ||||||
|   GridBase * fine  = fineData.Grid(); |   out = in; | ||||||
|   GridBase * coarse= coarseData.Grid(); |  | ||||||
|  |  | ||||||
|   Lattice<CComplex> ip(coarse);  |  | ||||||
|  |  | ||||||
|   //  auto fineData_   = fineData.View(); |  | ||||||
|   auto coarseData_ = coarseData.View(); |  | ||||||
|   auto ip_         = ip.View(); |  | ||||||
|   for(int v=0;v<nbasis;v++) { |  | ||||||
|     blockInnerProduct(ip,Basis[v],fineData); |  | ||||||
|     accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), { |  | ||||||
| 	coalescedWrite(coarseData_[sc](v),ip_(sc)); |  | ||||||
|       }); |  | ||||||
|   } |  | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex,int nbasis> | accelerator_inline void convertType(ComplexF & out, const std::complex<float> & in) { | ||||||
| inline void blockProject1(Lattice<iVector<CComplex,nbasis > > &coarseData, |   out = in; | ||||||
| 			 const             Lattice<vobj>   &fineData, | } | ||||||
| 			 const std::vector<Lattice<vobj> > &Basis) |  | ||||||
| { |  | ||||||
|   typedef iVector<CComplex,nbasis > coarseSiteData; |  | ||||||
|   coarseSiteData elide; |  | ||||||
|   typedef decltype(coalescedRead(elide)) ScalarComplex; |  | ||||||
|   GridBase * fine  = fineData.Grid(); |  | ||||||
|   GridBase * coarse= coarseData.Grid(); |  | ||||||
|   int  _ndimension = coarse->_ndimension; |  | ||||||
|  |  | ||||||
|   // checks | template<typename T> | ||||||
|   assert( nbasis == Basis.size() ); | accelerator_inline EnableIf<isGridFundamental<T>> convertType(T & out, const T & in) { | ||||||
|   subdivides(coarse,fine);  |   out = in; | ||||||
|   for(int i=0;i<nbasis;i++){ | } | ||||||
|     conformable(Basis[i],fineData); |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   Coordinate block_r      (_ndimension); | // This would allow for conversions between GridFundamental types, but is not strictly needed as yet | ||||||
|  | /*template<typename T1, typename T2> | ||||||
|  | accelerator_inline typename std::enable_if<isGridFundamental<T1>::value && isGridFundamental<T2>::value>::type | ||||||
|  | // Or to make this very broad, conversions between anything that's not a GridTensor could be allowed | ||||||
|  | //accelerator_inline typename std::enable_if<!isGridTensor<T1>::value && !isGridTensor<T2>::value>::type | ||||||
|  | convertType(T1 & out, const T2 & in) { | ||||||
|  |   out = in; | ||||||
|  | }*/ | ||||||
|  |  | ||||||
|   for(int d=0 ; d<_ndimension;d++){ | #ifdef GRID_SIMT | ||||||
|     block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d]; | accelerator_inline void convertType(vComplexF & out, const ComplexF & in) { | ||||||
|     assert(block_r[d]*coarse->_rdimensions[d] == fine->_rdimensions[d]); |   ((ComplexF*)&out)[acceleratorSIMTlane(vComplexF::Nsimd())] = in; | ||||||
|   } | } | ||||||
|   int blockVol = fine->oSites()/coarse->oSites(); | accelerator_inline void convertType(vComplexD & out, const ComplexD & in) { | ||||||
|  |   ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd())] = in; | ||||||
|  | } | ||||||
|  | accelerator_inline void convertType(vComplexD2 & out, const ComplexD & in) { | ||||||
|  |   ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd()*2)] = in; | ||||||
|  | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|   coarseData=Zero(); | accelerator_inline void convertType(vComplexF & out, const vComplexD2 & in) { | ||||||
|  |   out.v = Optimization::PrecisionChange::DtoS(in._internal[0].v,in._internal[1].v); | ||||||
|  | } | ||||||
|  |  | ||||||
|   auto fineData_   = fineData.View(); | accelerator_inline void convertType(vComplexD2 & out, const vComplexF & in) { | ||||||
|   auto coarseData_ = coarseData.View(); |   Optimization::PrecisionChange::StoD(in.v,out._internal[0].v,out._internal[1].v); | ||||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////////// | } | ||||||
|   // To make this lock free, loop over coars parallel, and then loop over fine associated with coarse. |  | ||||||
|   // Otherwise do fine inner product per site, and make the update atomic |  | ||||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   accelerator_for( sci, nbasis*coarse->oSites(), vobj::Nsimd(), { |  | ||||||
|  |  | ||||||
|     auto sc=sci/nbasis; | template<typename T1,typename T2> | ||||||
|     auto i=sci%nbasis; | accelerator_inline void convertType(iScalar<T1> & out, const iScalar<T2> & in) { | ||||||
|     auto Basis_      = Basis[i].View(); |   convertType(out._internal,in._internal); | ||||||
|  | } | ||||||
|  |  | ||||||
|     Coordinate coor_c(_ndimension); | template<typename T1,typename T2> | ||||||
|     Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate | accelerator_inline NotEnableIf<isGridScalar<T1>> convertType(T1 & out, const iScalar<T2> & in) { | ||||||
|  |   convertType(out,in._internal); | ||||||
|  | } | ||||||
|  |  | ||||||
|     int sf; | template<typename T1,typename T2> | ||||||
|     decltype(innerProduct(Basis_(sf),fineData_(sf))) reduce=Zero(); | accelerator_inline NotEnableIf<isGridScalar<T2>> convertType(iScalar<T1> & out, const T2 & in) { | ||||||
|  |   convertType(out._internal,in); | ||||||
|  | } | ||||||
|  |  | ||||||
|     for(int sb=0;sb<blockVol;sb++){ | template<typename T1,typename T2,int N> | ||||||
|  | accelerator_inline void convertType(iMatrix<T1,N> & out, const iMatrix<T2,N> & in) { | ||||||
|  |   for (int i=0;i<N;i++) | ||||||
|  |     for (int j=0;j<N;j++) | ||||||
|  |       convertType(out._internal[i][j],in._internal[i][j]); | ||||||
|  | } | ||||||
|  |  | ||||||
|       Coordinate coor_b(_ndimension); | template<typename T1,typename T2,int N> | ||||||
|       Coordinate coor_f(_ndimension); | accelerator_inline void convertType(iVector<T1,N> & out, const iVector<T2,N> & in) { | ||||||
|  |   for (int i=0;i<N;i++) | ||||||
|  |     convertType(out._internal[i],in._internal[i]); | ||||||
|  | } | ||||||
|  |  | ||||||
|       Lexicographic::CoorFromIndex(coor_b,sb,block_r); | template<typename T1,typename T2> | ||||||
|       for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d]+coor_b[d]; | accelerator_inline void convertType(Lattice<T1> & out, const Lattice<T2> & in) { | ||||||
|       Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions); |   autoView( out_v , out,AcceleratorWrite); | ||||||
|        |   autoView( in_v  , in ,AcceleratorRead); | ||||||
|       reduce=reduce+innerProduct(Basis_(sf),fineData_(sf)); |   accelerator_for(ss,out_v.size(),T1::Nsimd(),{ | ||||||
|     } |       convertType(out_v[ss],in_v(ss)); | ||||||
|     coalescedWrite(coarseData_[sc](i),reduce); |  | ||||||
|   }); |   }); | ||||||
|   return; |  | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex> | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| inline void blockZAXPY(Lattice<vobj> &fineZ, | // precision-promoted local inner product | ||||||
| 		       const Lattice<CComplex> &coarseA, | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| 		       const Lattice<vobj> &fineX, | template<class vobj> | ||||||
| 		       const Lattice<vobj> &fineY) | inline auto localInnerProductD(const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) | ||||||
|  | -> Lattice<iScalar<decltype(TensorRemove(innerProductD2(lhs.View(CpuRead)[0],rhs.View(CpuRead)[0])))>> | ||||||
|  | { | ||||||
|  |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|  |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|  |  | ||||||
|  |   typedef decltype(TensorRemove(innerProductD2(lhs_v[0],rhs_v[0]))) t_inner; | ||||||
|  |   Lattice<iScalar<t_inner>> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   { | ||||||
|  |     autoView(ret_v, ret,AcceleratorWrite); | ||||||
|  |     accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||||
|  |       convertType(ret_v[ss],innerProductD2(lhs_v(ss),rhs_v(ss))); | ||||||
|  |     }); | ||||||
|  |   } | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // block routines | ||||||
|  | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<class vobj,class CComplex,int nbasis,class VLattice> | ||||||
|  | inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||||
|  | 			   const             Lattice<vobj>   &fineData, | ||||||
|  | 			   const VLattice &Basis) | ||||||
|  | { | ||||||
|  |   GridBase * fine  = fineData.Grid(); | ||||||
|  |   GridBase * coarse= coarseData.Grid(); | ||||||
|  |  | ||||||
|  |   Lattice<iScalar<CComplex>> ip(coarse); | ||||||
|  |   Lattice<vobj>     fineDataRed = fineData; | ||||||
|  |  | ||||||
|  |   autoView( coarseData_ , coarseData, AcceleratorWrite); | ||||||
|  |   autoView( ip_         , ip,         AcceleratorWrite); | ||||||
|  |   for(int v=0;v<nbasis;v++) { | ||||||
|  |     blockInnerProductD(ip,Basis[v],fineDataRed); // ip = <basis|fine> | ||||||
|  |     accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), { | ||||||
|  | 	convertType(coarseData_[sc](v),ip_[sc]); | ||||||
|  |     }); | ||||||
|  |  | ||||||
|  |     // improve numerical stability of projection | ||||||
|  |     // |fine> = |fine> - <basis|fine> |basis> | ||||||
|  |     ip=-ip; | ||||||
|  |     blockZAXPY(fineDataRed,ip,Basis[v],fineDataRed);  | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class vobj,class vobj2,class CComplex> | ||||||
|  |   inline void blockZAXPY(Lattice<vobj> &fineZ, | ||||||
|  | 			 const Lattice<CComplex> &coarseA, | ||||||
|  | 			 const Lattice<vobj2> &fineX, | ||||||
|  | 			 const Lattice<vobj> &fineY) | ||||||
| { | { | ||||||
|   GridBase * fine  = fineZ.Grid(); |   GridBase * fine  = fineZ.Grid(); | ||||||
|   GridBase * coarse= coarseA.Grid(); |   GridBase * coarse= coarseA.Grid(); | ||||||
| @@ -191,29 +245,68 @@ inline void blockZAXPY(Lattice<vobj> &fineZ, | |||||||
|     assert(block_r[d]*coarse->_rdimensions[d]==fine->_rdimensions[d]); |     assert(block_r[d]*coarse->_rdimensions[d]==fine->_rdimensions[d]); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   auto fineZ_  = fineZ.View(); |   autoView( fineZ_  , fineZ, AcceleratorWrite); | ||||||
|   auto fineX_  = fineX.View(); |   autoView( fineX_  , fineX, AcceleratorRead); | ||||||
|   auto fineY_  = fineY.View(); |   autoView( fineY_  , fineY, AcceleratorRead); | ||||||
|   auto coarseA_= coarseA.View(); |   autoView( coarseA_, coarseA, AcceleratorRead); | ||||||
|  |   Coordinate fine_rdimensions = fine->_rdimensions; | ||||||
|  |   Coordinate coarse_rdimensions = coarse->_rdimensions; | ||||||
|  |  | ||||||
|   accelerator_for(sf, fine->oSites(), CComplex::Nsimd(), { |   accelerator_for(sf, fine->oSites(), CComplex::Nsimd(), { | ||||||
|  |  | ||||||
|     int sc; |       int sc; | ||||||
|     Coordinate coor_c(_ndimension); |       Coordinate coor_c(_ndimension); | ||||||
|     Coordinate coor_f(_ndimension); |       Coordinate coor_f(_ndimension); | ||||||
|  |  | ||||||
|     Lexicographic::CoorFromIndex(coor_f,sf,fine->_rdimensions); |       Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions); | ||||||
|     for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d]; |       for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d]; | ||||||
|     Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions); |       Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions); | ||||||
|  |  | ||||||
|     // z = A x + y |       // z = A x + y | ||||||
|     coalescedWrite(fineZ_[sf],coarseA_(sc)*fineX_(sf)+fineY_(sf)); | #ifdef GRID_SIMT | ||||||
|  |       typename vobj2::tensor_reduced::scalar_object cA; | ||||||
|  |       typename vobj::scalar_object cAx; | ||||||
|  | #else | ||||||
|  |       typename vobj2::tensor_reduced cA; | ||||||
|  |       vobj cAx; | ||||||
|  | #endif | ||||||
|  |       convertType(cA,TensorRemove(coarseA_(sc))); | ||||||
|  |       auto prod = cA*fineX_(sf); | ||||||
|  |       convertType(cAx,prod); | ||||||
|  |       coalescedWrite(fineZ_[sf],cAx+fineY_(sf)); | ||||||
|  |  | ||||||
|   }); |     }); | ||||||
|  |  | ||||||
|   return; |   return; | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex> | template<class vobj,class CComplex> | ||||||
|  |   inline void blockInnerProductD(Lattice<CComplex> &CoarseInner, | ||||||
|  | 				 const Lattice<vobj> &fineX, | ||||||
|  | 				 const Lattice<vobj> &fineY) | ||||||
|  | { | ||||||
|  |   typedef iScalar<decltype(TensorRemove(innerProductD2(vobj(),vobj())))> dotp; | ||||||
|  |  | ||||||
|  |   GridBase *coarse(CoarseInner.Grid()); | ||||||
|  |   GridBase *fine  (fineX.Grid()); | ||||||
|  |  | ||||||
|  |   Lattice<dotp> fine_inner(fine); fine_inner.Checkerboard() = fineX.Checkerboard(); | ||||||
|  |   Lattice<dotp> coarse_inner(coarse); | ||||||
|  |  | ||||||
|  |   // Precision promotion | ||||||
|  |   fine_inner = localInnerProductD<vobj>(fineX,fineY); | ||||||
|  |   blockSum(coarse_inner,fine_inner); | ||||||
|  |   { | ||||||
|  |     autoView( CoarseInner_  , CoarseInner,AcceleratorWrite); | ||||||
|  |     autoView( coarse_inner_ , coarse_inner,AcceleratorRead); | ||||||
|  |     accelerator_for(ss, coarse->oSites(), 1, { | ||||||
|  |       convertType(CoarseInner_[ss], TensorRemove(coarse_inner_[ss])); | ||||||
|  |     }); | ||||||
|  |   } | ||||||
|  |   | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class vobj,class CComplex> // deprecate | ||||||
| inline void blockInnerProduct(Lattice<CComplex> &CoarseInner, | inline void blockInnerProduct(Lattice<CComplex> &CoarseInner, | ||||||
| 			      const Lattice<vobj> &fineX, | 			      const Lattice<vobj> &fineX, | ||||||
| 			      const Lattice<vobj> &fineY) | 			      const Lattice<vobj> &fineY) | ||||||
| @@ -227,15 +320,17 @@ inline void blockInnerProduct(Lattice<CComplex> &CoarseInner, | |||||||
|   Lattice<dotp> coarse_inner(coarse); |   Lattice<dotp> coarse_inner(coarse); | ||||||
|  |  | ||||||
|   // Precision promotion? |   // Precision promotion? | ||||||
|   auto CoarseInner_  = CoarseInner.View(); |  | ||||||
|   auto coarse_inner_ = coarse_inner.View(); |  | ||||||
|  |  | ||||||
|   fine_inner = localInnerProduct(fineX,fineY); |   fine_inner = localInnerProduct(fineX,fineY); | ||||||
|   blockSum(coarse_inner,fine_inner); |   blockSum(coarse_inner,fine_inner); | ||||||
|   accelerator_for(ss, coarse->oSites(), 1, { |   { | ||||||
|     CoarseInner_[ss] = coarse_inner_[ss]; |     autoView( CoarseInner_  , CoarseInner, AcceleratorWrite); | ||||||
|   }); |     autoView( coarse_inner_ , coarse_inner, AcceleratorRead); | ||||||
|  |     accelerator_for(ss, coarse->oSites(), 1, { | ||||||
|  | 	CoarseInner_[ss] = coarse_inner_[ss]; | ||||||
|  |     }); | ||||||
|  |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex> | template<class vobj,class CComplex> | ||||||
| inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX) | inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX) | ||||||
| { | { | ||||||
| @@ -266,32 +361,44 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData) | |||||||
|  |  | ||||||
|   // Turn this around to loop threaded over sc and interior loop  |   // Turn this around to loop threaded over sc and interior loop  | ||||||
|   // over sf would thread better |   // over sf would thread better | ||||||
|   auto coarseData_ = coarseData.View(); |   autoView( coarseData_ , coarseData, AcceleratorWrite); | ||||||
|   auto fineData_   = fineData.View(); |   autoView( fineData_   , fineData, AcceleratorRead); | ||||||
|  |  | ||||||
|  |   auto coarseData_p = &coarseData_[0]; | ||||||
|  |   auto fineData_p = &fineData_[0]; | ||||||
|  |    | ||||||
|  |   Coordinate fine_rdimensions = fine->_rdimensions; | ||||||
|  |   Coordinate coarse_rdimensions = coarse->_rdimensions; | ||||||
|  |  | ||||||
|  |   vobj zz = Zero(); | ||||||
|    |    | ||||||
|   accelerator_for(sc,coarse->oSites(),1,{ |   accelerator_for(sc,coarse->oSites(),1,{ | ||||||
|  |  | ||||||
|     // One thread per sub block |       // One thread per sub block | ||||||
|     Coordinate coor_c(_ndimension); |       Coordinate coor_c(_ndimension); | ||||||
|     Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate |       Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions);  // Block coordinate | ||||||
|     coarseData_[sc]=Zero(); |  | ||||||
|  |  | ||||||
|     for(int sb=0;sb<blockVol;sb++){ |       vobj cd = zz; | ||||||
|        |        | ||||||
|       int sf; |       for(int sb=0;sb<blockVol;sb++){ | ||||||
|       Coordinate coor_b(_ndimension); |  | ||||||
|       Coordinate coor_f(_ndimension); |  | ||||||
|       Lexicographic::CoorFromIndex(coor_b,sb,block_r);               // Block sub coordinate |  | ||||||
|       for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d]; |  | ||||||
|       Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions); |  | ||||||
|  |  | ||||||
|       coarseData_[sc]=coarseData_[sc]+fineData_[sf]; | 	int sf; | ||||||
|     } | 	Coordinate coor_b(_ndimension); | ||||||
|  | 	Coordinate coor_f(_ndimension); | ||||||
|  | 	Lexicographic::CoorFromIndex(coor_b,sb,block_r);               // Block sub coordinate | ||||||
|  | 	for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d]; | ||||||
|  | 	Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions); | ||||||
|  |  | ||||||
|   }); | 	cd=cd+fineData_p[sf]; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       coarseData_p[sc] = cd; | ||||||
|  |  | ||||||
|  |     }); | ||||||
|   return; |   return; | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vobj> &picked,Coordinate coor) | inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vobj> &picked,Coordinate coor) | ||||||
| { | { | ||||||
| @@ -313,8 +420,8 @@ inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vob | |||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class CComplex> | template<class CComplex,class VLattice> | ||||||
| inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) | inline void blockOrthonormalize(Lattice<CComplex> &ip,VLattice &Basis) | ||||||
| { | { | ||||||
|   GridBase *coarse = ip.Grid(); |   GridBase *coarse = ip.Grid(); | ||||||
|   GridBase *fine   = Basis[0].Grid(); |   GridBase *fine   = Basis[0].Grid(); | ||||||
| @@ -330,15 +437,22 @@ inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > | |||||||
|   for(int v=0;v<nbasis;v++) { |   for(int v=0;v<nbasis;v++) { | ||||||
|     for(int u=0;u<v;u++) { |     for(int u=0;u<v;u++) { | ||||||
|       //Inner product & remove component |       //Inner product & remove component | ||||||
|       blockInnerProduct(ip,Basis[u],Basis[v]); |       blockInnerProductD(ip,Basis[u],Basis[v]); | ||||||
|       ip = -ip; |       ip = -ip; | ||||||
|       blockZAXPY<vobj,CComplex> (Basis[v],ip,Basis[u],Basis[v]); |       blockZAXPY(Basis[v],ip,Basis[u],Basis[v]); | ||||||
|     } |     } | ||||||
|     blockNormalise(ip,Basis[v]); |     blockNormalise(ip,Basis[v]); | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
|  | template<class vobj,class CComplex> | ||||||
|  | inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) // deprecated inaccurate naming | ||||||
|  | { | ||||||
|  |   blockOrthonormalize(ip,Basis); | ||||||
|  | } | ||||||
|  |  | ||||||
| #if 0 | #if 0 | ||||||
|  | // TODO: CPU optimized version here | ||||||
| template<class vobj,class CComplex,int nbasis> | template<class vobj,class CComplex,int nbasis> | ||||||
| inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||||
| 			 Lattice<vobj>   &fineData, | 			 Lattice<vobj>   &fineData, | ||||||
| @@ -360,8 +474,8 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | |||||||
|   for(int d=0 ; d<_ndimension;d++){ |   for(int d=0 ; d<_ndimension;d++){ | ||||||
|     block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d]; |     block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d]; | ||||||
|   } |   } | ||||||
|   auto fineData_   = fineData.View(); |   autoView( fineData_   , fineData, AcceleratorWrite); | ||||||
|   auto coarseData_ = coarseData.View(); |   autoView( coarseData_ , coarseData, AcceleratorRead); | ||||||
|  |  | ||||||
|   // Loop with a cache friendly loop ordering |   // Loop with a cache friendly loop ordering | ||||||
|   accelerator_for(sf,fine->oSites(),1,{ |   accelerator_for(sf,fine->oSites(),1,{ | ||||||
| @@ -374,7 +488,7 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | |||||||
|     Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions); |     Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions); | ||||||
|  |  | ||||||
|     for(int i=0;i<nbasis;i++) { |     for(int i=0;i<nbasis;i++) { | ||||||
|       auto basis_ = Basis[i].View(); |       /*      auto basis_ = Basis[i],  );*/ | ||||||
|       if(i==0) fineData_[sf]=coarseData_[sc](i) *basis_[sf]); |       if(i==0) fineData_[sf]=coarseData_[sc](i) *basis_[sf]); | ||||||
|       else     fineData_[sf]=fineData_[sf]+coarseData_[sc](i)*basis_[sf]); |       else     fineData_[sf]=fineData_[sf]+coarseData_[sc](i)*basis_[sf]); | ||||||
|     } |     } | ||||||
| @@ -383,24 +497,25 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | |||||||
|    |    | ||||||
| } | } | ||||||
| #else | #else | ||||||
| template<class vobj,class CComplex,int nbasis> | template<class vobj,class CComplex,int nbasis,class VLattice> | ||||||
| inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||||
| 			 Lattice<vobj>   &fineData, | 			 Lattice<vobj>   &fineData, | ||||||
| 			 const std::vector<Lattice<vobj> > &Basis) | 			 const VLattice &Basis) | ||||||
| { | { | ||||||
|   GridBase * fine  = fineData.Grid(); |   GridBase * fine  = fineData.Grid(); | ||||||
|   GridBase * coarse= coarseData.Grid(); |   GridBase * coarse= coarseData.Grid(); | ||||||
|  |  | ||||||
|   fineData=Zero(); |   fineData=Zero(); | ||||||
|   for(int i=0;i<nbasis;i++) { |   for(int i=0;i<nbasis;i++) { | ||||||
|     Lattice<iScalar<CComplex> > ip = PeekIndex<0>(coarseData,i); |     Lattice<iScalar<CComplex> > ip = PeekIndex<0>(coarseData,i); | ||||||
|     Lattice<CComplex> cip(coarse); |  | ||||||
|     auto cip_ = cip.View(); |     //Lattice<CComplex> cip(coarse); | ||||||
|     auto  ip_ =  ip.View(); |     //autoView( cip_ , cip, AcceleratorWrite); | ||||||
|     accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{ |     //autoView(  ip_ ,  ip, AcceleratorRead); | ||||||
| 	coalescedWrite(cip_[sc], ip_(sc)()); |     //accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{ | ||||||
|     }); |     //	coalescedWrite(cip_[sc], ip_(sc)()); | ||||||
|     blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData); |     //  }); | ||||||
|  |     //blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData); | ||||||
|  |     blockZAXPY(fineData,ip,Basis[i],fineData); | ||||||
|   } |   } | ||||||
| } | } | ||||||
| #endif | #endif | ||||||
| @@ -427,15 +542,17 @@ void localConvert(const Lattice<vobj> &in,Lattice<vvobj> &out) | |||||||
|     assert(ig->lSites() == og->lSites()); |     assert(ig->lSites() == og->lSites()); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  |   autoView(in_v,in,CpuRead); | ||||||
|  |   autoView(out_v,out,CpuWrite); | ||||||
|   thread_for(idx, ig->lSites(),{ |   thread_for(idx, ig->lSites(),{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     ssobj ss; |     ssobj ss; | ||||||
|  |  | ||||||
|     Coordinate lcoor(ni); |     Coordinate lcoor(ni); | ||||||
|     ig->LocalIndexToLocalCoor(idx,lcoor); |     ig->LocalIndexToLocalCoor(idx,lcoor); | ||||||
|     peekLocalSite(s,in,lcoor); |     peekLocalSite(s,in_v,lcoor); | ||||||
|     ss=s; |     ss=s; | ||||||
|     pokeLocalSite(ss,out,lcoor); |     pokeLocalSite(ss,out_v,lcoor); | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
|  |  | ||||||
| @@ -470,8 +587,9 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro | |||||||
|   Coordinate rdt = Tg->_rdimensions; |   Coordinate rdt = Tg->_rdimensions; | ||||||
|   Coordinate ist = Tg->_istride; |   Coordinate ist = Tg->_istride; | ||||||
|   Coordinate ost = Tg->_ostride; |   Coordinate ost = Tg->_ostride; | ||||||
|   auto t_v = To.View(); |  | ||||||
|   auto f_v = From.View(); |   autoView( t_v , To, AcceleratorWrite); | ||||||
|  |   autoView( f_v , From, AcceleratorRead); | ||||||
|   accelerator_for(idx,Fg->lSites(),1,{ |   accelerator_for(idx,Fg->lSites(),1,{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     Coordinate Fcoor(nd); |     Coordinate Fcoor(nd); | ||||||
| @@ -494,8 +612,6 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro | |||||||
|       for(int w=0;w<words;w++){ |       for(int w=0;w<words;w++){ | ||||||
| 	tp[idx_t+w*Nsimd] = fp[idx_f+w*Nsimd];  // FIXME IF RRII layout, type pun no worke | 	tp[idx_t+w*Nsimd] = fp[idx_f+w*Nsimd];  // FIXME IF RRII layout, type pun no worke | ||||||
|       } |       } | ||||||
|       //      peekLocalSite(s,From,Fcoor); |  | ||||||
|       //      pokeLocalSite(s,To  ,Tcoor); |  | ||||||
|     } |     } | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| @@ -526,6 +642,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   // the above should guarantee that the operations are local |   // the above should guarantee that the operations are local | ||||||
|  |   autoView(lowDimv,lowDim,CpuRead); | ||||||
|  |   autoView(higherDimv,higherDim,CpuWrite); | ||||||
|   thread_for(idx,lg->lSites(),{ |   thread_for(idx,lg->lSites(),{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     Coordinate lcoor(nl); |     Coordinate lcoor(nl); | ||||||
| @@ -538,8 +656,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice | |||||||
| 	hcoor[d]=lcoor[ddl++]; | 	hcoor[d]=lcoor[ddl++]; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|     peekLocalSite(s,lowDim,lcoor); |     peekLocalSite(s,lowDimv,lcoor); | ||||||
|     pokeLocalSite(s,higherDim,hcoor); |     pokeLocalSite(s,higherDimv,hcoor); | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
|  |  | ||||||
| @@ -567,6 +685,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic | |||||||
|     } |     } | ||||||
|   } |   } | ||||||
|   // the above should guarantee that the operations are local |   // the above should guarantee that the operations are local | ||||||
|  |   autoView(lowDimv,lowDim,CpuWrite); | ||||||
|  |   autoView(higherDimv,higherDim,CpuRead); | ||||||
|   thread_for(idx,lg->lSites(),{ |   thread_for(idx,lg->lSites(),{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     Coordinate lcoor(nl); |     Coordinate lcoor(nl); | ||||||
| @@ -579,8 +699,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic | |||||||
| 	hcoor[d]=lcoor[ddl++]; | 	hcoor[d]=lcoor[ddl++]; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|     peekLocalSite(s,higherDim,hcoor); |     peekLocalSite(s,higherDimv,hcoor); | ||||||
|     pokeLocalSite(s,lowDim,lcoor); |     pokeLocalSite(s,lowDimv,lcoor); | ||||||
|   }); |   }); | ||||||
|  |  | ||||||
| } | } | ||||||
| @@ -608,6 +728,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   // the above should guarantee that the operations are local |   // the above should guarantee that the operations are local | ||||||
|  |   autoView(lowDimv,lowDim,CpuRead); | ||||||
|  |   autoView(higherDimv,higherDim,CpuWrite); | ||||||
|   thread_for(idx,lg->lSites(),{ |   thread_for(idx,lg->lSites(),{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     Coordinate lcoor(nl); |     Coordinate lcoor(nl); | ||||||
| @@ -616,8 +738,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int | |||||||
|     if( lcoor[orthog] == slice_lo ) {  |     if( lcoor[orthog] == slice_lo ) {  | ||||||
|       hcoor=lcoor; |       hcoor=lcoor; | ||||||
|       hcoor[orthog] = slice_hi; |       hcoor[orthog] = slice_hi; | ||||||
|       peekLocalSite(s,lowDim,lcoor); |       peekLocalSite(s,lowDimv,lcoor); | ||||||
|       pokeLocalSite(s,higherDim,hcoor); |       pokeLocalSite(s,higherDimv,hcoor); | ||||||
|     } |     } | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| @@ -645,6 +767,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   // the above should guarantee that the operations are local |   // the above should guarantee that the operations are local | ||||||
|  |   autoView(lowDimv,lowDim,CpuWrite); | ||||||
|  |   autoView(higherDimv,higherDim,CpuRead); | ||||||
|   thread_for(idx,lg->lSites(),{ |   thread_for(idx,lg->lSites(),{ | ||||||
|     sobj s; |     sobj s; | ||||||
|     Coordinate lcoor(nl); |     Coordinate lcoor(nl); | ||||||
| @@ -653,8 +777,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int | |||||||
|     if( lcoor[orthog] == slice_lo ) {  |     if( lcoor[orthog] == slice_lo ) {  | ||||||
|       hcoor=lcoor; |       hcoor=lcoor; | ||||||
|       hcoor[orthog] = slice_hi; |       hcoor[orthog] = slice_hi; | ||||||
|       peekLocalSite(s,higherDim,hcoor); |       peekLocalSite(s,higherDimv,hcoor); | ||||||
|       pokeLocalSite(s,lowDim,lcoor); |       pokeLocalSite(s,lowDimv,lcoor); | ||||||
|     } |     } | ||||||
|   }); |   }); | ||||||
| } | } | ||||||
| @@ -718,7 +842,7 @@ unvectorizeToLexOrdArray(std::vector<sobj> &out, const Lattice<vobj> &in) | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   //loop over outer index |   //loop over outer index | ||||||
|   auto in_v  = in.View(); |   autoView( in_v  , in, CpuRead); | ||||||
|   thread_for(in_oidx,in_grid->oSites(),{ |   thread_for(in_oidx,in_grid->oSites(),{ | ||||||
|     //Assemble vector of pointers to output elements |     //Assemble vector of pointers to output elements | ||||||
|     ExtractPointerArray<sobj> out_ptrs(in_nsimd); |     ExtractPointerArray<sobj> out_ptrs(in_nsimd); | ||||||
| @@ -811,7 +935,7 @@ vectorizeFromLexOrdArray( std::vector<sobj> &in, Lattice<vobj> &out) | |||||||
|     icoor[lane].resize(ndim); |     icoor[lane].resize(ndim); | ||||||
|     grid->iCoorFromIindex(icoor[lane],lane); |     grid->iCoorFromIindex(icoor[lane],lane); | ||||||
|   } |   } | ||||||
|   auto out_v = out.View(); |   autoView( out_v , out, CpuWrite); | ||||||
|   thread_for(oidx, grid->oSites(),{ |   thread_for(oidx, grid->oSites(),{ | ||||||
|     //Assemble vector of pointers to output elements |     //Assemble vector of pointers to output elements | ||||||
|     ExtractPointerArray<sobj> ptrs(nsimd); |     ExtractPointerArray<sobj> ptrs(nsimd); | ||||||
| @@ -914,7 +1038,7 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | |||||||
|   std::vector<SobjOut> in_slex_conv(in_grid->lSites()); |   std::vector<SobjOut> in_slex_conv(in_grid->lSites()); | ||||||
|   unvectorizeToLexOrdArray(in_slex_conv, in); |   unvectorizeToLexOrdArray(in_slex_conv, in); | ||||||
|      |      | ||||||
|   auto out_v = out.View(); |   autoView( out_v , out, CpuWrite); | ||||||
|   thread_for(out_oidx,out_grid->oSites(),{ |   thread_for(out_oidx,out_grid->oSites(),{ | ||||||
|     Coordinate out_ocoor(ndim); |     Coordinate out_ocoor(ndim); | ||||||
|     out_grid->oCoorFromOindex(out_ocoor, out_oidx); |     out_grid->oCoorFromOindex(out_ocoor, out_oidx); | ||||||
|   | |||||||
| @@ -38,16 +38,18 @@ NAMESPACE_BEGIN(Grid); | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Transpose | // Transpose | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | /* | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline Lattice<vobj> transpose(const Lattice<vobj> &lhs){ | inline Lattice<vobj> transpose(const Lattice<vobj> &lhs){ | ||||||
|   Lattice<vobj> ret(lhs.Grid()); |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ | ||||||
|     coalescedWrite(ret_v[ss], transpose(lhs_v(ss))); |     coalescedWrite(ret_v[ss], transpose(lhs_v(ss))); | ||||||
|   }); |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  | */     | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Index level dependent transpose | // Index level dependent transpose | ||||||
| @@ -56,8 +58,8 @@ template<int Index,class vobj> | |||||||
| inline auto TransposeIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(transposeIndex<Index>(vobj()))> | inline auto TransposeIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(transposeIndex<Index>(vobj()))> | ||||||
| { | { | ||||||
|   Lattice<decltype(transposeIndex<Index>(vobj()))> ret(lhs.Grid()); |   Lattice<decltype(transposeIndex<Index>(vobj()))> ret(lhs.Grid()); | ||||||
|   auto ret_v = ret.View(); |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|   auto lhs_v = lhs.View(); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ |   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ | ||||||
|     coalescedWrite(ret_v[ss] , transposeIndex<Index>(lhs_v(ss))); |     coalescedWrite(ret_v[ss] , transposeIndex<Index>(lhs_v(ss))); | ||||||
|   }); |   }); | ||||||
|   | |||||||
| @@ -35,8 +35,8 @@ NAMESPACE_BEGIN(Grid); | |||||||
|  |  | ||||||
| template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){ | template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){ | ||||||
|   Lattice<obj> ret_i(rhs_i.Grid()); |   Lattice<obj> ret_i(rhs_i.Grid()); | ||||||
|   auto rhs = rhs_i.View(); |   autoView( rhs, rhs_i, AcceleratorRead); | ||||||
|   auto ret = ret_i.View(); |   autoView( ret, ret_i, AcceleratorWrite); | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   accelerator_for(ss,rhs.size(),1,{ |   accelerator_for(ss,rhs.size(),1,{ | ||||||
|       ret[ss]=pow(rhs[ss],y); |       ret[ss]=pow(rhs[ss],y); | ||||||
| @@ -45,8 +45,8 @@ template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){ | |||||||
| } | } | ||||||
| template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){ | template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){ | ||||||
|   Lattice<obj> ret_i(rhs_i.Grid()); |   Lattice<obj> ret_i(rhs_i.Grid()); | ||||||
|   auto rhs = rhs_i.View(); |   autoView( rhs , rhs_i, AcceleratorRead); | ||||||
|   auto ret = ret_i.View(); |   autoView( ret , ret_i, AcceleratorWrite); | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ |   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||||
|     coalescedWrite(ret[ss],mod(rhs(ss),y)); |     coalescedWrite(ret[ss],mod(rhs(ss),y)); | ||||||
| @@ -56,8 +56,8 @@ template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){ | |||||||
|  |  | ||||||
| template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){ | template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){ | ||||||
|   Lattice<obj> ret_i(rhs_i.Grid()); |   Lattice<obj> ret_i(rhs_i.Grid()); | ||||||
|   auto ret = ret_i.View(); |   autoView( ret , ret_i, AcceleratorWrite); | ||||||
|   auto rhs = rhs_i.View(); |   autoView( rhs , rhs_i, AcceleratorRead); | ||||||
|   ret.Checkerboard() = rhs_i.Checkerboard(); |   ret.Checkerboard() = rhs_i.Checkerboard(); | ||||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ |   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||||
|     coalescedWrite(ret[ss],div(rhs(ss),y)); |     coalescedWrite(ret[ss],div(rhs(ss),y)); | ||||||
| @@ -67,8 +67,8 @@ template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){ | |||||||
|  |  | ||||||
| template<class obj> Lattice<obj> expMat(const Lattice<obj> &rhs_i, RealD alpha, Integer Nexp = DEFAULT_MAT_EXP){ | template<class obj> Lattice<obj> expMat(const Lattice<obj> &rhs_i, RealD alpha, Integer Nexp = DEFAULT_MAT_EXP){ | ||||||
|   Lattice<obj> ret_i(rhs_i.Grid()); |   Lattice<obj> ret_i(rhs_i.Grid()); | ||||||
|   auto rhs = rhs_i.View(); |   autoView( rhs , rhs_i, AcceleratorRead); | ||||||
|   auto ret = ret_i.View(); |   autoView( ret , ret_i, AcceleratorWrite); | ||||||
|   ret.Checkerboard() = rhs.Checkerboard(); |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ |   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||||
|     coalescedWrite(ret[ss],Exponentiate(rhs(ss),alpha, Nexp)); |     coalescedWrite(ret[ss],Exponentiate(rhs(ss),alpha, Nexp)); | ||||||
|   | |||||||
							
								
								
									
										173
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										173
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,173 @@ | |||||||
|  | #pragma once | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | /////////////////////////////////////////////////////////////////// | ||||||
|  | // Base class which can be used by traits to pick up behaviour | ||||||
|  | /////////////////////////////////////////////////////////////////// | ||||||
|  | class LatticeBase {}; | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Conformable checks; same instance of Grid required | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | void accelerator_inline conformable(GridBase *lhs,GridBase *rhs) | ||||||
|  | { | ||||||
|  |   assert(lhs == rhs); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Minimal base class containing only data valid to access from accelerator | ||||||
|  | // _odata will be a managed pointer in CUDA | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Force access to lattice through a view object. | ||||||
|  | // prevents writing of code that will not offload to GPU, but perhaps annoyingly | ||||||
|  | // strict since host could could in principle direct access through the lattice object | ||||||
|  | // Need to decide programming model. | ||||||
|  | #define LATTICE_VIEW_STRICT | ||||||
|  | template<class vobj> class LatticeAccelerator : public LatticeBase | ||||||
|  | { | ||||||
|  | protected: | ||||||
|  |   //public: | ||||||
|  |   GridBase *_grid; | ||||||
|  |   int checkerboard; | ||||||
|  |   vobj     *_odata;    // A managed pointer | ||||||
|  |   uint64_t _odata_size;     | ||||||
|  |   ViewAdvise advise; | ||||||
|  | public: | ||||||
|  |   accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr), advise(AdviseDefault) { };  | ||||||
|  |   accelerator_inline uint64_t oSites(void) const { return _odata_size; }; | ||||||
|  |   accelerator_inline int  Checkerboard(void) const { return checkerboard; }; | ||||||
|  |   accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view | ||||||
|  |   accelerator_inline ViewAdvise Advise(void) const { return advise; }; | ||||||
|  |   accelerator_inline ViewAdvise &Advise(void) { return this->advise; }; // can assign advise on a container, not a view | ||||||
|  |   accelerator_inline void Conformable(GridBase * &grid) const | ||||||
|  |   {  | ||||||
|  |     if (grid) conformable(grid, _grid); | ||||||
|  |     else      grid = _grid; | ||||||
|  |   }; | ||||||
|  |   // Host only | ||||||
|  |   GridBase * getGrid(void) const { return _grid; }; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // A View class which provides accessor to the data. | ||||||
|  | // This will be safe to call from accelerator_for and is trivially copy constructible | ||||||
|  | // The copy constructor for this will need to be used by device lambda functions | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<class vobj>  | ||||||
|  | class LatticeView : public LatticeAccelerator<vobj> | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   // Rvalue | ||||||
|  |   ViewMode mode; | ||||||
|  |   void * cpu_ptr; | ||||||
|  | #ifdef GRID_SIMT | ||||||
|  |   accelerator_inline const typename vobj::scalar_object operator()(size_t i) const {  | ||||||
|  |     return coalescedRead(this->_odata[i]);  | ||||||
|  |   } | ||||||
|  | #else  | ||||||
|  |   accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | #if 1 | ||||||
|  |   //  accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; | ||||||
|  |   accelerator_inline vobj       & operator[](size_t i) const { return this->_odata[i]; }; | ||||||
|  | #else | ||||||
|  |   accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; | ||||||
|  |   accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; }; | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  |   accelerator_inline uint64_t begin(void) const { return 0;}; | ||||||
|  |   accelerator_inline uint64_t end(void)   const { return this->_odata_size; }; | ||||||
|  |   accelerator_inline uint64_t size(void)  const { return this->_odata_size; }; | ||||||
|  |  | ||||||
|  |   LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me){} | ||||||
|  |   LatticeView(const LatticeView<vobj> &refer_to_me) = default; // Trivially copyable | ||||||
|  |   LatticeView(const LatticeAccelerator<vobj> &refer_to_me,ViewMode mode) : LatticeAccelerator<vobj> (refer_to_me) | ||||||
|  |   { | ||||||
|  |     this->ViewOpen(mode); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Host functions | ||||||
|  |   void ViewOpen(ViewMode mode) | ||||||
|  |   { // Translate the pointer, could save a copy. Could use a "Handle" and not save _odata originally in base | ||||||
|  |     //    std::cout << "View Open"<<std::hex<<this->_odata<<std::dec <<std::endl; | ||||||
|  |     this->cpu_ptr = (void *)this->_odata; | ||||||
|  |     this->mode    = mode; | ||||||
|  |     this->_odata  =(vobj *) | ||||||
|  |       MemoryManager::ViewOpen(this->cpu_ptr, | ||||||
|  | 				this->_odata_size*sizeof(vobj), | ||||||
|  | 				mode, | ||||||
|  | 				this->advise);     | ||||||
|  |   } | ||||||
|  |   void ViewClose(void) | ||||||
|  |   { // Inform the manager | ||||||
|  |     //    std::cout << "View Close"<<std::hex<<this->cpu_ptr<<std::dec <<std::endl; | ||||||
|  |     MemoryManager::ViewClose(this->cpu_ptr,this->mode);     | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | }; | ||||||
|  | // Little autoscope assister | ||||||
|  | template<class View>  | ||||||
|  | class ViewCloser | ||||||
|  | { | ||||||
|  |   View v;  // Take a copy of view and call view close when I go out of scope automatically | ||||||
|  |  public: | ||||||
|  |   ViewCloser(View &_v) : v(_v) {}; | ||||||
|  |   ~ViewCloser() { v.ViewClose(); } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | #define autoView(l_v,l,mode)				\ | ||||||
|  | 	  auto l_v = l.View(mode);			\ | ||||||
|  | 	  ViewCloser<decltype(l_v)> _autoView##l_v(l_v); | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Lattice expression types used by ET to assemble the AST | ||||||
|  | //  | ||||||
|  | // Need to be able to detect code paths according to the whether a lattice object or not | ||||||
|  | // so introduce some trait type things | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  | class LatticeExpressionBase {}; | ||||||
|  |  | ||||||
|  | template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>; | ||||||
|  | template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >; | ||||||
|  |  | ||||||
|  | template<class T, bool isLattice> struct ViewMapBase { typedef T Type; }; | ||||||
|  | template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; }; | ||||||
|  | template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >; | ||||||
|  |  | ||||||
|  | template <typename Op, typename _T1>                            | ||||||
|  | class LatticeUnaryExpression : public  LatticeExpressionBase  | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   typedef typename ViewMap<_T1>::Type T1; | ||||||
|  |   Op op; | ||||||
|  |   T1 arg1; | ||||||
|  |   LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {}; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template <typename Op, typename _T1, typename _T2>               | ||||||
|  | class LatticeBinaryExpression : public LatticeExpressionBase  | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   typedef typename ViewMap<_T1>::Type T1; | ||||||
|  |   typedef typename ViewMap<_T2>::Type T2; | ||||||
|  |   Op op; | ||||||
|  |   T1 arg1; | ||||||
|  |   T2 arg2; | ||||||
|  |   LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {}; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template <typename Op, typename _T1, typename _T2, typename _T3>  | ||||||
|  | class LatticeTrinaryExpression : public LatticeExpressionBase  | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   typedef typename ViewMap<_T1>::Type T1; | ||||||
|  |   typedef typename ViewMap<_T2>::Type T2; | ||||||
|  |   typedef typename ViewMap<_T3>::Type T3; | ||||||
|  |   Op op; | ||||||
|  |   T1 arg1; | ||||||
|  |   T2 arg2; | ||||||
|  |   T3 arg3; | ||||||
|  |   LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {}; | ||||||
|  | }; | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -43,7 +43,7 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice< | |||||||
|   conformable(iftrue,predicate); |   conformable(iftrue,predicate); | ||||||
|   conformable(iftrue,ret); |   conformable(iftrue,ret); | ||||||
|  |  | ||||||
|   GridBase *grid=iftrue._grid; |   GridBase *grid=iftrue.Grid(); | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_object scalar_object; |   typedef typename vobj::scalar_object scalar_object; | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
| @@ -52,22 +52,23 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice< | |||||||
|  |  | ||||||
|   const int Nsimd = grid->Nsimd(); |   const int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|   std::vector<Integer> mask(Nsimd); |   autoView(iftrue_v,iftrue,CpuRead); | ||||||
|   std::vector<scalar_object> truevals (Nsimd); |   autoView(iffalse_v,iffalse,CpuRead); | ||||||
|   std::vector<scalar_object> falsevals(Nsimd); |   autoView(predicate_v,predicate,CpuRead); | ||||||
|  |   autoView(ret_v,ret,CpuWrite); | ||||||
|   parallel_for(int ss=0;ss<iftrue._grid->oSites(); ss++){ |   Integer NN= grid->oSites(); | ||||||
|  |   thread_for(ss,NN,{ | ||||||
|     extract(iftrue._odata[ss]   ,truevals); |     Integer mask; | ||||||
|     extract(iffalse._odata[ss]  ,falsevals); |     scalar_object trueval; | ||||||
|     extract<vInteger,Integer>(TensorRemove(predicate._odata[ss]),mask); |     scalar_object falseval; | ||||||
|  |     for(int l=0;l<Nsimd;l++){ | ||||||
|     for(int s=0;s<Nsimd;s++){ |       trueval =extractLane(l,iftrue_v[ss]); | ||||||
|       if (mask[s]) falsevals[s]=truevals[s]; |       falseval=extractLane(l,iffalse_v[ss]); | ||||||
|  |       mask    =extractLane(l,predicate_v[ss]); | ||||||
|  |       if (mask) falseval=trueval; | ||||||
|  |       insertLane(l,ret_v[ss],falseval); | ||||||
|     } |     } | ||||||
|  |   }); | ||||||
|     merge(ret._odata[ss],falsevals); |  | ||||||
|   } |  | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj,class iobj> | template<class vobj,class iobj> | ||||||
| @@ -76,9 +77,9 @@ inline Lattice<vobj> whereWolf(const Lattice<iobj> &predicate,Lattice<vobj> &ift | |||||||
|   conformable(iftrue,iffalse); |   conformable(iftrue,iffalse); | ||||||
|   conformable(iftrue,predicate); |   conformable(iftrue,predicate); | ||||||
|  |  | ||||||
|   Lattice<vobj> ret(iftrue._grid); |   Lattice<vobj> ret(iftrue.Grid()); | ||||||
|  |  | ||||||
|   where(ret,predicate,iftrue,iffalse); |   whereWolf(ret,predicate,iftrue,iffalse); | ||||||
|  |  | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|   | |||||||
| @@ -130,6 +130,8 @@ public: | |||||||
|   friend std::ostream& operator<< (std::ostream& stream, Logger& log){ |   friend std::ostream& operator<< (std::ostream& stream, Logger& log){ | ||||||
|  |  | ||||||
|     if ( log.active ) { |     if ( log.active ) { | ||||||
|  |       std::ios_base::fmtflags f(stream.flags()); | ||||||
|  |  | ||||||
|       stream << log.background()<<  std::left; |       stream << log.background()<<  std::left; | ||||||
|       if (log.topWidth > 0) |       if (log.topWidth > 0) | ||||||
|       { |       { | ||||||
| @@ -152,6 +154,8 @@ public: | |||||||
| 	       << now	       << log.background() << " : " ; | 	       << now	       << log.background() << " : " ; | ||||||
|       } |       } | ||||||
|       stream << log.colour(); |       stream << log.colour(); | ||||||
|  |       stream.flags(f); | ||||||
|  |  | ||||||
|       return stream; |       return stream; | ||||||
|     } else {  |     } else {  | ||||||
|       return devnull; |       return devnull; | ||||||
|   | |||||||
| @@ -1,3 +1,4 @@ | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| int Grid::BinaryIO::latticeWriteMaxRetry = -1; | int                    Grid::BinaryIO::latticeWriteMaxRetry = -1; | ||||||
|  | Grid::BinaryIO::IoPerf Grid::BinaryIO::lastPerf; | ||||||
|   | |||||||
| @@ -79,6 +79,13 @@ inline void removeWhitespace(std::string &key) | |||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| class BinaryIO { | class BinaryIO { | ||||||
|  public: |  public: | ||||||
|  |   struct IoPerf | ||||||
|  |   { | ||||||
|  |     uint64_t size{0},time{0}; | ||||||
|  |     double   mbytesPerSecond{0.}; | ||||||
|  |   }; | ||||||
|  |  | ||||||
|  |   static IoPerf lastPerf; | ||||||
|   static int latticeWriteMaxRetry; |   static int latticeWriteMaxRetry; | ||||||
|  |  | ||||||
|   ///////////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -341,7 +348,7 @@ class BinaryIO { | |||||||
|     int ieee32big = (format == std::string("IEEE32BIG")); |     int ieee32big = (format == std::string("IEEE32BIG")); | ||||||
|     int ieee32    = (format == std::string("IEEE32")); |     int ieee32    = (format == std::string("IEEE32")); | ||||||
|     int ieee64big = (format == std::string("IEEE64BIG")); |     int ieee64big = (format == std::string("IEEE64BIG")); | ||||||
|     int ieee64    = (format == std::string("IEEE64")); |     int ieee64    = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE")); | ||||||
|     assert(ieee64||ieee32|ieee64big||ieee32big); |     assert(ieee64||ieee32|ieee64big||ieee32big); | ||||||
|     assert((ieee64+ieee32+ieee64big+ieee32big)==1); |     assert((ieee64+ieee32+ieee64big+ieee32big)==1); | ||||||
|     ////////////////////////////////////////////////////////////////////////////// |     ////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -502,12 +509,15 @@ class BinaryIO { | |||||||
|       timer.Stop(); |       timer.Stop(); | ||||||
|     } |     } | ||||||
|      |      | ||||||
|  |     lastPerf.size            = sizeof(fobj)*iodata.size()*nrank; | ||||||
|  |     lastPerf.time            = timer.useconds(); | ||||||
|  |     lastPerf.mbytesPerSecond = lastPerf.size/1024./1024./(lastPerf.time/1.0e6); | ||||||
|     std::cout<<GridLogMessage<<"IOobject: "; |     std::cout<<GridLogMessage<<"IOobject: "; | ||||||
|     if ( control & BINARYIO_READ) std::cout << " read  "; |     if ( control & BINARYIO_READ) std::cout << " read  "; | ||||||
|     else                          std::cout << " write "; |     else                          std::cout << " write "; | ||||||
|     uint64_t bytes = sizeof(fobj)*iodata.size()*nrank; |     uint64_t bytes = sizeof(fobj)*iodata.size()*nrank; | ||||||
|     std::cout<< bytes <<" bytes in "<<timer.Elapsed() <<" " |     std::cout<< lastPerf.size <<" bytes in "<< timer.Elapsed() <<" " | ||||||
| 	     << (double)bytes/ (double)timer.useconds() <<" MB/s "<<std::endl; | 	     << lastPerf.mbytesPerSecond <<" MB/s "<<std::endl; | ||||||
|  |  | ||||||
|     std::cout<<GridLogMessage<<"IOobject: endian and checksum overhead "<<bstimer.Elapsed()  <<std::endl; |     std::cout<<GridLogMessage<<"IOobject: endian and checksum overhead "<<bstimer.Elapsed()  <<std::endl; | ||||||
|  |  | ||||||
| @@ -663,10 +673,15 @@ class BinaryIO { | |||||||
| 	     nersc_csum,scidac_csuma,scidac_csumb); | 	     nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|  |  | ||||||
|     timer.Start(); |     timer.Start(); | ||||||
|     thread_for(lidx,lsites,{ |     thread_for(lidx,lsites,{  // FIX ME, suboptimal implementation | ||||||
|       std::vector<RngStateType> tmp(RngStateCount); |       std::vector<RngStateType> tmp(RngStateCount); | ||||||
|       std::copy(iodata[lidx].begin(),iodata[lidx].end(),tmp.begin()); |       std::copy(iodata[lidx].begin(),iodata[lidx].end(),tmp.begin()); | ||||||
|       parallel_rng.SetState(tmp,lidx); |       Coordinate lcoor; | ||||||
|  |       grid->LocalIndexToLocalCoor(lidx, lcoor); | ||||||
|  |       int o_idx=grid->oIndex(lcoor); | ||||||
|  |       int i_idx=grid->iIndex(lcoor); | ||||||
|  |       int gidx=parallel_rng.generator_idx(o_idx,i_idx); | ||||||
|  |       parallel_rng.SetState(tmp,gidx); | ||||||
|       }); |       }); | ||||||
|     timer.Stop(); |     timer.Stop(); | ||||||
|  |  | ||||||
| @@ -723,7 +738,12 @@ class BinaryIO { | |||||||
|     std::vector<RNGstate> iodata(lsites); |     std::vector<RNGstate> iodata(lsites); | ||||||
|     thread_for(lidx,lsites,{ |     thread_for(lidx,lsites,{ | ||||||
|       std::vector<RngStateType> tmp(RngStateCount); |       std::vector<RngStateType> tmp(RngStateCount); | ||||||
|       parallel_rng.GetState(tmp,lidx); |       Coordinate lcoor; | ||||||
|  |       grid->LocalIndexToLocalCoor(lidx, lcoor); | ||||||
|  |       int o_idx=grid->oIndex(lcoor); | ||||||
|  |       int i_idx=grid->iIndex(lcoor); | ||||||
|  |       int gidx=parallel_rng.generator_idx(o_idx,i_idx); | ||||||
|  |       parallel_rng.GetState(tmp,gidx); | ||||||
|       std::copy(tmp.begin(),tmp.end(),iodata[lidx].begin()); |       std::copy(tmp.begin(),tmp.end(),iodata[lidx].begin()); | ||||||
|     }); |     }); | ||||||
|     timer.Stop(); |     timer.Stop(); | ||||||
|   | |||||||
| @@ -123,7 +123,7 @@ assert(GRID_FIELD_NORM_CALC(FieldNormMetaData_, n2ck) < 1.0e-5); | |||||||
|  //////////////////////////////////////////////////////////// |  //////////////////////////////////////////////////////////// | ||||||
|  // Helper to fill out metadata |  // Helper to fill out metadata | ||||||
|  //////////////////////////////////////////////////////////// |  //////////////////////////////////////////////////////////// | ||||||
|  template<class vobj> void ScidacMetaData(Lattice<vobj> & field, | template<class vobj> void ScidacMetaData(Lattice<vobj> & field, | ||||||
| 					  FieldMetaData &header, | 					  FieldMetaData &header, | ||||||
| 					  scidacRecord & _scidacRecord, | 					  scidacRecord & _scidacRecord, | ||||||
| 					  scidacFile   & _scidacFile)  | 					  scidacFile   & _scidacFile)  | ||||||
| @@ -619,12 +619,12 @@ class IldgWriter : public ScidacWriter { | |||||||
|   // Don't require scidac records EXCEPT checksum |   // Don't require scidac records EXCEPT checksum | ||||||
|   // Use Grid MetaData object if present. |   // Use Grid MetaData object if present. | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   template <class vsimd> |   template <class stats = PeriodicGaugeStatistics> | ||||||
|   void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,int sequence,std::string LFN,std::string description)  |   void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,int sequence,std::string LFN,std::string description)  | ||||||
|   { |   { | ||||||
|     GridBase * grid = Umu.Grid(); |     GridBase * grid = Umu.Grid(); | ||||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; |     typedef Lattice<vLorentzColourMatrixD> GaugeField; | ||||||
|     typedef iLorentzColourMatrix<vsimd> vobj; |     typedef vLorentzColourMatrixD vobj; | ||||||
|     typedef typename vobj::scalar_object sobj; |     typedef typename vobj::scalar_object sobj; | ||||||
|  |  | ||||||
|     //////////////////////////////////////// |     //////////////////////////////////////// | ||||||
| @@ -636,6 +636,9 @@ class IldgWriter : public ScidacWriter { | |||||||
|  |  | ||||||
|     ScidacMetaData(Umu,header,_scidacRecord,_scidacFile); |     ScidacMetaData(Umu,header,_scidacRecord,_scidacFile); | ||||||
|  |  | ||||||
|  |     stats Stats; | ||||||
|  |     Stats(Umu,header); | ||||||
|  |      | ||||||
|     std::string format = header.floating_point; |     std::string format = header.floating_point; | ||||||
|     header.ensemble_id    = description; |     header.ensemble_id    = description; | ||||||
|     header.ensemble_label = description; |     header.ensemble_label = description; | ||||||
| @@ -705,10 +708,10 @@ class IldgReader : public GridLimeReader { | |||||||
|   // Else use ILDG MetaData object if present. |   // Else use ILDG MetaData object if present. | ||||||
|   // Else use SciDAC MetaData object if present. |   // Else use SciDAC MetaData object if present. | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   template <class vsimd> |   template <class stats = PeriodicGaugeStatistics> | ||||||
|   void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, FieldMetaData &FieldMetaData_) { |   void readConfiguration(Lattice<vLorentzColourMatrixD> &Umu, FieldMetaData &FieldMetaData_) { | ||||||
|  |  | ||||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; |     typedef Lattice<vLorentzColourMatrixD > GaugeField; | ||||||
|     typedef typename GaugeField::vector_object  vobj; |     typedef typename GaugeField::vector_object  vobj; | ||||||
|     typedef typename vobj::scalar_object sobj; |     typedef typename vobj::scalar_object sobj; | ||||||
|  |  | ||||||
| @@ -921,7 +924,8 @@ class IldgReader : public GridLimeReader { | |||||||
|  |  | ||||||
|     if ( found_FieldMetaData || found_usqcdInfo ) { |     if ( found_FieldMetaData || found_usqcdInfo ) { | ||||||
|       FieldMetaData checker; |       FieldMetaData checker; | ||||||
|       GaugeStatistics(Umu,checker); |       stats Stats; | ||||||
|  |       Stats(Umu,checker); | ||||||
|       assert(fabs(checker.plaquette  - FieldMetaData_.plaquette )<1.0e-5); |       assert(fabs(checker.plaquette  - FieldMetaData_.plaquette )<1.0e-5); | ||||||
|       assert(fabs(checker.link_trace - FieldMetaData_.link_trace)<1.0e-5); |       assert(fabs(checker.link_trace - FieldMetaData_.link_trace)<1.0e-5); | ||||||
|       std::cout << GridLogMessage<<"Plaquette and link trace match " << std::endl; |       std::cout << GridLogMessage<<"Plaquette and link trace match " << std::endl; | ||||||
|   | |||||||
| @@ -128,7 +128,7 @@ inline void MachineCharacteristics(FieldMetaData &header) | |||||||
|   std::time_t t = std::time(nullptr); |   std::time_t t = std::time(nullptr); | ||||||
|   std::tm tm_ = *std::localtime(&t); |   std::tm tm_ = *std::localtime(&t); | ||||||
|   std::ostringstream oss;  |   std::ostringstream oss;  | ||||||
|   //      oss << std::put_time(&tm_, "%c %Z"); |   oss << std::put_time(&tm_, "%c %Z"); | ||||||
|   header.creation_date = oss.str(); |   header.creation_date = oss.str(); | ||||||
|   header.archive_date  = header.creation_date; |   header.archive_date  = header.creation_date; | ||||||
|  |  | ||||||
| @@ -176,29 +176,18 @@ template<class vobj> inline void PrepareMetaData(Lattice<vobj> & field, FieldMet | |||||||
|   GridMetaData(grid,header);  |   GridMetaData(grid,header);  | ||||||
|   MachineCharacteristics(header); |   MachineCharacteristics(header); | ||||||
| } | } | ||||||
| inline void GaugeStatistics(Lattice<vLorentzColourMatrixF> & data,FieldMetaData &header) | template<class Impl> | ||||||
|  | class GaugeStatistics | ||||||
| { | { | ||||||
|   // How to convert data precision etc... | public: | ||||||
|   header.link_trace=WilsonLoops<PeriodicGimplF>::linkTrace(data); |   void operator()(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header) | ||||||
|   header.plaquette =WilsonLoops<PeriodicGimplF>::avgPlaquette(data); |   { | ||||||
| } |     header.link_trace=WilsonLoops<Impl>::linkTrace(data); | ||||||
| inline void GaugeStatistics(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header) |     header.plaquette =WilsonLoops<Impl>::avgPlaquette(data); | ||||||
| { |   } | ||||||
|   // How to convert data precision etc... | }; | ||||||
|   header.link_trace=WilsonLoops<PeriodicGimplD>::linkTrace(data); | typedef GaugeStatistics<PeriodicGimplD> PeriodicGaugeStatistics; | ||||||
|   header.plaquette =WilsonLoops<PeriodicGimplD>::avgPlaquette(data); | typedef GaugeStatistics<ConjugateGimplD> ConjugateGaugeStatistics; | ||||||
| } |  | ||||||
| template<> inline void PrepareMetaData<vLorentzColourMatrixF>(Lattice<vLorentzColourMatrixF> & field, FieldMetaData &header) |  | ||||||
| { |  | ||||||
|     |  | ||||||
|   GridBase *grid = field.Grid(); |  | ||||||
|   std::string format = getFormatString<vLorentzColourMatrixF>(); |  | ||||||
|   header.floating_point = format; |  | ||||||
|   header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac |  | ||||||
|   GridMetaData(grid,header);  |  | ||||||
|   GaugeStatistics(field,header); |  | ||||||
|   MachineCharacteristics(header); |  | ||||||
| } |  | ||||||
| template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzColourMatrixD> & field, FieldMetaData &header) | template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzColourMatrixD> & field, FieldMetaData &header) | ||||||
| { | { | ||||||
|   GridBase *grid = field.Grid(); |   GridBase *grid = field.Grid(); | ||||||
| @@ -206,7 +195,6 @@ template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzCo | |||||||
|   header.floating_point = format; |   header.floating_point = format; | ||||||
|   header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac |   header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac | ||||||
|   GridMetaData(grid,header);  |   GridMetaData(grid,header);  | ||||||
|   GaugeStatistics(field,header); |  | ||||||
|   MachineCharacteristics(header); |   MachineCharacteristics(header); | ||||||
| } | } | ||||||
|  |  | ||||||
| @@ -301,6 +289,30 @@ struct GaugeSimpleUnmunger { | |||||||
|   }; |   }; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class fobj,class sobj> | ||||||
|  | struct GaugeDoubleStoredMunger{ | ||||||
|  |   void operator()(fobj &in, sobj &out) { | ||||||
|  |     for (int mu = 0; mu < Nds; mu++) { | ||||||
|  |       for (int i = 0; i < Nc; i++) { | ||||||
|  |         for (int j = 0; j < Nc; j++) { | ||||||
|  |           out(mu)()(i, j) = in(mu)()(i, j); | ||||||
|  |         }} | ||||||
|  |     } | ||||||
|  |   }; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template <class fobj, class sobj> | ||||||
|  | struct GaugeDoubleStoredUnmunger { | ||||||
|  |   void operator()(sobj &in, fobj &out) { | ||||||
|  |     for (int mu = 0; mu < Nds; mu++) { | ||||||
|  |       for (int i = 0; i < Nc; i++) { | ||||||
|  |         for (int j = 0; j < Nc; j++) { | ||||||
|  |           out(mu)()(i, j) = in(mu)()(i, j); | ||||||
|  |         }} | ||||||
|  |     } | ||||||
|  |   }; | ||||||
|  | }; | ||||||
|  |  | ||||||
| template<class fobj,class sobj> | template<class fobj,class sobj> | ||||||
| struct Gauge3x2munger{ | struct Gauge3x2munger{ | ||||||
|   void operator() (fobj &in,sobj &out){ |   void operator() (fobj &in,sobj &out){ | ||||||
|   | |||||||
| @@ -40,6 +40,8 @@ using namespace Grid; | |||||||
| class NerscIO : public BinaryIO {  | class NerscIO : public BinaryIO {  | ||||||
| public: | public: | ||||||
|  |  | ||||||
|  |   typedef Lattice<vLorentzColourMatrixD> GaugeField; | ||||||
|  |  | ||||||
|   static inline void truncate(std::string file){ |   static inline void truncate(std::string file){ | ||||||
|     std::ofstream fout(file,std::ios::out); |     std::ofstream fout(file,std::ios::out); | ||||||
|   } |   } | ||||||
| @@ -129,12 +131,12 @@ public: | |||||||
|   // Now the meat: the object readers |   // Now the meat: the object readers | ||||||
|   ///////////////////////////////////////////////////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|   template<class vsimd> |   template<class GaugeStats=PeriodicGaugeStatistics> | ||||||
|   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, |   static inline void readConfiguration(GaugeField &Umu, | ||||||
| 				       FieldMetaData& header, | 				       FieldMetaData& header, | ||||||
| 				       std::string file) | 				       std::string file, | ||||||
|  | 				       GaugeStats GaugeStatisticsCalculator=GaugeStats()) | ||||||
|   { |   { | ||||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; |  | ||||||
|  |  | ||||||
|     GridBase *grid = Umu.Grid(); |     GridBase *grid = Umu.Grid(); | ||||||
|     uint64_t offset = readHeader(file,Umu.Grid(),header); |     uint64_t offset = readHeader(file,Umu.Grid(),header); | ||||||
| @@ -146,30 +148,30 @@ public: | |||||||
|     int ieee32big = (format == std::string("IEEE32BIG")); |     int ieee32big = (format == std::string("IEEE32BIG")); | ||||||
|     int ieee32    = (format == std::string("IEEE32")); |     int ieee32    = (format == std::string("IEEE32")); | ||||||
|     int ieee64big = (format == std::string("IEEE64BIG")); |     int ieee64big = (format == std::string("IEEE64BIG")); | ||||||
|     int ieee64    = (format == std::string("IEEE64")); |     int ieee64    = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE")); | ||||||
|  |  | ||||||
|     uint32_t nersc_csum,scidac_csuma,scidac_csumb; |     uint32_t nersc_csum,scidac_csuma,scidac_csumb; | ||||||
|     // depending on datatype, set up munger; |     // depending on datatype, set up munger; | ||||||
|     // munger is a function of <floating point, Real, data_type> |     // munger is a function of <floating point, Real, data_type> | ||||||
|     if ( header.data_type == std::string("4D_SU3_GAUGE") ) { |     if ( header.data_type == std::string("4D_SU3_GAUGE") ) { | ||||||
|       if ( ieee32 || ieee32big ) { |       if ( ieee32 || ieee32big ) { | ||||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3F>  | 	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3F>  | ||||||
| 	  (Umu,file,Gauge3x2munger<LorentzColour2x3F,LorentzColourMatrix>(), offset,format, | 	  (Umu,file,Gauge3x2munger<LorentzColour2x3F,LorentzColourMatrix>(), offset,format, | ||||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|       } |       } | ||||||
|       if ( ieee64 || ieee64big ) { |       if ( ieee64 || ieee64big ) { | ||||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3D>  | 	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3D>  | ||||||
| 	  (Umu,file,Gauge3x2munger<LorentzColour2x3D,LorentzColourMatrix>(),offset,format, | 	  (Umu,file,Gauge3x2munger<LorentzColour2x3D,LorentzColourMatrix>(),offset,format, | ||||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|       } |       } | ||||||
|     } else if ( header.data_type == std::string("4D_SU3_GAUGE_3x3") ) { |     } else if ( header.data_type == std::string("4D_SU3_GAUGE_3x3") ) { | ||||||
|       if ( ieee32 || ieee32big ) { |       if ( ieee32 || ieee32big ) { | ||||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixF> | 	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixF> | ||||||
| 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixF,LorentzColourMatrix>(),offset,format, | 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixF,LorentzColourMatrix>(),offset,format, | ||||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|       } |       } | ||||||
|       if ( ieee64 || ieee64big ) { |       if ( ieee64 || ieee64big ) { | ||||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixD> | 	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixD> | ||||||
| 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixD,LorentzColourMatrix>(),offset,format, | 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixD,LorentzColourMatrix>(),offset,format, | ||||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|       } |       } | ||||||
| @@ -177,7 +179,7 @@ public: | |||||||
|       assert(0); |       assert(0); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     GaugeStatistics(Umu,clone); |     GaugeStats Stats; Stats(Umu,clone); | ||||||
|  |  | ||||||
|     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<<" checksum "<<std::hex<<nersc_csum<< std::dec |     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<<" checksum "<<std::hex<<nersc_csum<< std::dec | ||||||
| 	     <<" header   "<<std::hex<<header.checksum<<std::dec <<std::endl; | 	     <<" header   "<<std::hex<<header.checksum<<std::dec <<std::endl; | ||||||
| @@ -203,15 +205,22 @@ public: | |||||||
|     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<< " and plaquette, link trace, and checksum agree"<<std::endl; |     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<< " and plaquette, link trace, and checksum agree"<<std::endl; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   template<class vsimd> |   // Preferred interface | ||||||
|   static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, |   template<class GaugeStats=PeriodicGaugeStatistics> | ||||||
|  |   static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu, | ||||||
|  | 					std::string file,  | ||||||
|  | 					std::string ens_label = std::string("DWF")) | ||||||
|  |   { | ||||||
|  |     writeConfiguration(Umu,file,0,1,ens_label); | ||||||
|  |   } | ||||||
|  |   template<class GaugeStats=PeriodicGaugeStatistics> | ||||||
|  |   static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu, | ||||||
| 					std::string file,  | 					std::string file,  | ||||||
| 					int two_row, | 					int two_row, | ||||||
| 					int bits32) | 					int bits32, | ||||||
|  | 					std::string ens_label = std::string("DWF")) | ||||||
|   { |   { | ||||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; |     typedef vLorentzColourMatrixD vobj; | ||||||
|  |  | ||||||
|     typedef iLorentzColourMatrix<vsimd> vobj; |  | ||||||
|     typedef typename vobj::scalar_object sobj; |     typedef typename vobj::scalar_object sobj; | ||||||
|  |  | ||||||
|     FieldMetaData header; |     FieldMetaData header; | ||||||
| @@ -219,8 +228,8 @@ public: | |||||||
|     // Following should become arguments |     // Following should become arguments | ||||||
|     /////////////////////////////////////////// |     /////////////////////////////////////////// | ||||||
|     header.sequence_number = 1; |     header.sequence_number = 1; | ||||||
|     header.ensemble_id     = "UKQCD"; |     header.ensemble_id     = std::string("UKQCD"); | ||||||
|     header.ensemble_label  = "DWF"; |     header.ensemble_label  = ens_label; | ||||||
|  |  | ||||||
|     typedef LorentzColourMatrixD fobj3D; |     typedef LorentzColourMatrixD fobj3D; | ||||||
|     typedef LorentzColour2x3D    fobj2D; |     typedef LorentzColour2x3D    fobj2D; | ||||||
| @@ -229,28 +238,28 @@ public: | |||||||
|  |  | ||||||
|     GridMetaData(grid,header); |     GridMetaData(grid,header); | ||||||
|     assert(header.nd==4); |     assert(header.nd==4); | ||||||
|     GaugeStatistics(Umu,header); |     GaugeStats Stats; Stats(Umu,header); | ||||||
|     MachineCharacteristics(header); |     MachineCharacteristics(header); | ||||||
|  |  | ||||||
| 	uint64_t offset; |     uint64_t offset; | ||||||
|  |  | ||||||
|     // Sod it -- always write 3x3 double |     // Sod it -- always write 3x3 double | ||||||
|     header.floating_point = std::string("IEEE64BIG"); |     header.floating_point = std::string("IEEE64BIG"); | ||||||
|     header.data_type      = std::string("4D_SU3_GAUGE_3x3"); |     header.data_type      = std::string("4D_SU3_GAUGE_3x3"); | ||||||
|     GaugeSimpleUnmunger<fobj3D,sobj> munge; |     GaugeSimpleUnmunger<fobj3D,sobj> munge; | ||||||
| 	if ( grid->IsBoss() ) {  |     if ( grid->IsBoss() ) {  | ||||||
| 	  truncate(file); |       truncate(file); | ||||||
|     offset = writeHeader(header,file); |       offset = writeHeader(header,file); | ||||||
| 	} |     } | ||||||
| 	grid->Broadcast(0,(void *)&offset,sizeof(offset)); |     grid->Broadcast(0,(void *)&offset,sizeof(offset)); | ||||||
|  |  | ||||||
|     uint32_t nersc_csum,scidac_csuma,scidac_csumb; |     uint32_t nersc_csum,scidac_csuma,scidac_csumb; | ||||||
|     BinaryIO::writeLatticeObject<vobj,fobj3D>(Umu,file,munge,offset,header.floating_point, |     BinaryIO::writeLatticeObject<vobj,fobj3D>(Umu,file,munge,offset,header.floating_point, | ||||||
| 					      nersc_csum,scidac_csuma,scidac_csumb); | 					      nersc_csum,scidac_csuma,scidac_csumb); | ||||||
|     header.checksum = nersc_csum; |     header.checksum = nersc_csum; | ||||||
| 	if ( grid->IsBoss() ) {  |     if ( grid->IsBoss() ) {  | ||||||
|     writeHeader(header,file); |       writeHeader(header,file); | ||||||
| 	} |     } | ||||||
|  |  | ||||||
|     std::cout<<GridLogMessage <<"Written NERSC Configuration on "<< file << " checksum " |     std::cout<<GridLogMessage <<"Written NERSC Configuration on "<< file << " checksum " | ||||||
| 	     <<std::hex<<header.checksum | 	     <<std::hex<<header.checksum | ||||||
|   | |||||||
							
								
								
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,224 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/parallelIO/OpenQcdIO.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 - 2020 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | struct OpenQcdHeader : Serializable { | ||||||
|  |   GRID_SERIALIZABLE_CLASS_MEMBERS(OpenQcdHeader, | ||||||
|  |                                   int,    Nt, | ||||||
|  |                                   int,    Nx, | ||||||
|  |                                   int,    Ny, | ||||||
|  |                                   int,    Nz, | ||||||
|  |                                   double, plaq); | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | class OpenQcdIO : public BinaryIO { | ||||||
|  | public: | ||||||
|  |   static constexpr double normalisationFactor = Nc; // normalisation difference: grid 18, openqcd 6 | ||||||
|  |  | ||||||
|  |   static inline int readHeader(std::string file, GridBase* grid, FieldMetaData& field) { | ||||||
|  |     OpenQcdHeader header; | ||||||
|  |  | ||||||
|  |     { | ||||||
|  |       std::ifstream fin(file, std::ios::in | std::ios::binary); | ||||||
|  |       fin.read(reinterpret_cast<char*>(&header), sizeof(OpenQcdHeader)); | ||||||
|  |       assert(!fin.fail()); | ||||||
|  |       field.data_start = fin.tellg(); | ||||||
|  |       fin.close(); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     header.plaq /= normalisationFactor; | ||||||
|  |  | ||||||
|  |     // sanity check (should trigger on endian issues) | ||||||
|  |     assert(0 < header.Nt && header.Nt <= 1024); | ||||||
|  |     assert(0 < header.Nx && header.Nx <= 1024); | ||||||
|  |     assert(0 < header.Ny && header.Ny <= 1024); | ||||||
|  |     assert(0 < header.Nz && header.Nz <= 1024); | ||||||
|  |  | ||||||
|  |     field.dimension[0] = header.Nx; | ||||||
|  |     field.dimension[1] = header.Ny; | ||||||
|  |     field.dimension[2] = header.Nz; | ||||||
|  |     field.dimension[3] = header.Nt; | ||||||
|  |  | ||||||
|  |     std::cout << GridLogDebug << "header: " << header << std::endl; | ||||||
|  |     std::cout << GridLogDebug << "grid dimensions: " << grid->_fdimensions << std::endl; | ||||||
|  |     std::cout << GridLogDebug << "file dimensions: " << field.dimension << std::endl; | ||||||
|  |  | ||||||
|  |     assert(grid->_ndimension == Nd); | ||||||
|  |     for(int d = 0; d < Nd; d++) | ||||||
|  |       assert(grid->_fdimensions[d] == field.dimension[d]); | ||||||
|  |  | ||||||
|  |     field.plaquette = header.plaq; | ||||||
|  |  | ||||||
|  |     return field.data_start; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   template<class vsimd> | ||||||
|  |   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||||
|  |                                        FieldMetaData&                        header, | ||||||
|  |                                        std::string                           file) { | ||||||
|  |     typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubleStoredGaugeField; | ||||||
|  |  | ||||||
|  |     assert(Ns == 4 and Nd == 4 and Nc == 3); | ||||||
|  |  | ||||||
|  |     auto grid = dynamic_cast<GridCartesian*>(Umu.Grid()); | ||||||
|  |     assert(grid != nullptr); assert(grid->_ndimension == Nd); | ||||||
|  |  | ||||||
|  |     uint64_t offset = readHeader(file, Umu.Grid(), header); | ||||||
|  |  | ||||||
|  |     FieldMetaData clone(header); | ||||||
|  |  | ||||||
|  |     std::string format("IEEE64"); // they always store little endian double precsision | ||||||
|  |     uint32_t    nersc_csum, scidac_csuma, scidac_csumb; | ||||||
|  |  | ||||||
|  |     GridCartesian*         grid_openqcd = createOpenQcdGrid(grid); | ||||||
|  |     GridRedBlackCartesian* grid_rb      = SpaceTimeGrid::makeFourDimRedBlackGrid(grid); | ||||||
|  |  | ||||||
|  |     typedef DoubleStoredColourMatrixD                                              fobj; | ||||||
|  |     typedef typename DoubleStoredGaugeField::vector_object::scalar_object          sobj; | ||||||
|  |     typedef typename DoubleStoredGaugeField::vector_object::Realified::scalar_type word; | ||||||
|  |  | ||||||
|  |     word w = 0; | ||||||
|  |  | ||||||
|  |     std::vector<fobj> iodata(grid_openqcd->lSites()); // Munge, checksum, byte order in here | ||||||
|  |     std::vector<sobj> scalardata(grid->lSites()); | ||||||
|  |  | ||||||
|  |     IOobject(w, grid_openqcd, iodata, file, offset, format, BINARYIO_READ | BINARYIO_LEXICOGRAPHIC, | ||||||
|  |              nersc_csum, scidac_csuma, scidac_csumb); | ||||||
|  |  | ||||||
|  |     GridStopWatch timer; | ||||||
|  |     timer.Start(); | ||||||
|  |  | ||||||
|  |     DoubleStoredGaugeField Umu_ds(grid); | ||||||
|  |  | ||||||
|  |     auto munge = GaugeDoubleStoredMunger<DoubleStoredColourMatrixD, DoubleStoredColourMatrix>(); | ||||||
|  |  | ||||||
|  |     Coordinate ldim = grid->LocalDimensions(); | ||||||
|  |     thread_for(idx_g, grid->lSites(), { | ||||||
|  |         Coordinate coor; | ||||||
|  |         grid->LocalIndexToLocalCoor(idx_g, coor); | ||||||
|  |  | ||||||
|  |         bool isOdd = grid_rb->CheckerBoard(coor) == Odd; | ||||||
|  |  | ||||||
|  |         if(!isOdd) continue; | ||||||
|  |  | ||||||
|  |         int idx_o = (coor[Tdir] * ldim[Xdir] * ldim[Ydir] * ldim[Zdir] | ||||||
|  |                   +  coor[Xdir] * ldim[Ydir] * ldim[Zdir] | ||||||
|  |                   +  coor[Ydir] * ldim[Zdir] | ||||||
|  |                   +  coor[Zdir])/2; | ||||||
|  |  | ||||||
|  |         munge(iodata[idx_o], scalardata[idx_g]); | ||||||
|  |     }); | ||||||
|  |  | ||||||
|  |     grid->Barrier(); timer.Stop(); | ||||||
|  |     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: munge overhead " << timer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |     timer.Reset(); timer.Start(); | ||||||
|  |  | ||||||
|  |     vectorizeFromLexOrdArray(scalardata, Umu_ds); | ||||||
|  |  | ||||||
|  |     grid->Barrier(); timer.Stop(); | ||||||
|  |     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: vectorize overhead " << timer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |     timer.Reset(); timer.Start(); | ||||||
|  |  | ||||||
|  |     undoDoubleStore(Umu, Umu_ds); | ||||||
|  |  | ||||||
|  |     grid->Barrier(); timer.Stop(); | ||||||
|  |     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: redistribute overhead " << timer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |     PeriodicGaugeStatistics Stats; Stats(Umu, clone); | ||||||
|  |  | ||||||
|  |     RealD plaq_diff = fabs(clone.plaquette - header.plaquette); | ||||||
|  |  | ||||||
|  |     // clang-format off | ||||||
|  |     std::cout << GridLogMessage << "OpenQcd Configuration " << file | ||||||
|  |               << " plaquette " << clone.plaquette | ||||||
|  |               << " header " << header.plaquette | ||||||
|  |               << " difference " << plaq_diff | ||||||
|  |               << std::endl; | ||||||
|  |     // clang-format on | ||||||
|  |  | ||||||
|  |     RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15; | ||||||
|  |     RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code | ||||||
|  |  | ||||||
|  |     if(plaq_diff >= tol) | ||||||
|  |       std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl; | ||||||
|  |     assert(plaq_diff < tol); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   template<class vsimd> | ||||||
|  |   static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||||
|  |                                         std::string                           file) { | ||||||
|  |     std::cout << GridLogError << "Writing to openQCD file format is not implemented" << std::endl; | ||||||
|  |     exit(EXIT_FAILURE); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | private: | ||||||
|  |   static inline GridCartesian* createOpenQcdGrid(GridCartesian* grid) { | ||||||
|  |     // exploit GridCartesian to be able to still use IOobject | ||||||
|  |     Coordinate gdim  = grid->GlobalDimensions(); | ||||||
|  |     Coordinate ldim  = grid->LocalDimensions(); | ||||||
|  |     Coordinate pcoor = grid->ThisProcessorCoor(); | ||||||
|  |  | ||||||
|  |     // openqcd does rb on the z direction | ||||||
|  |     gdim[Zdir] /= 2; | ||||||
|  |     ldim[Zdir] /= 2; | ||||||
|  |  | ||||||
|  |     // and has the order T X Y Z (from slowest to fastest) | ||||||
|  |     std::swap(gdim[Xdir], gdim[Zdir]); | ||||||
|  |     std::swap(ldim[Xdir], ldim[Zdir]); | ||||||
|  |     std::swap(pcoor[Xdir], pcoor[Zdir]); | ||||||
|  |  | ||||||
|  |     GridCartesian* ret   = SpaceTimeGrid::makeFourDimGrid(gdim, grid->_simd_layout, grid->ProcessorGrid()); | ||||||
|  |     ret->_ldimensions    = ldim; | ||||||
|  |     ret->_processor_coor = pcoor; | ||||||
|  |     return ret; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   template<class vsimd> | ||||||
|  |   static inline void undoDoubleStore(Lattice<iLorentzColourMatrix<vsimd>>&            Umu, | ||||||
|  |                                      Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) { | ||||||
|  |     conformable(Umu.Grid(), Umu_ds.Grid()); | ||||||
|  |     Lattice<iColourMatrix<vsimd>> U(Umu.Grid()); | ||||||
|  |  | ||||||
|  |     // they store T+, T-, X+, X-, Y+, Y-, Z+, Z- | ||||||
|  |     for(int mu_g = 0; mu_g < Nd; ++mu_g) { | ||||||
|  |       int mu_o = (mu_g + 1) % Nd; | ||||||
|  |       U        = PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o) | ||||||
|  |                + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o + 1), mu_g, +1); | ||||||
|  |       PokeIndex<LorentzIndex>(Umu, U, mu_g); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
							
								
								
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,281 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/parallelIO/OpenQcdIOChromaReference.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 - 2020 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | #include <ios> | ||||||
|  | #include <iostream> | ||||||
|  | #include <limits> | ||||||
|  | #include <iomanip> | ||||||
|  | #include <mpi.h> | ||||||
|  | #include <ostream> | ||||||
|  | #include <string> | ||||||
|  |  | ||||||
|  | #define CHECK {std::cerr << __FILE__ << " @l " << __LINE__ << ": CHECK" << grid->ThisRank() << std::endl;} | ||||||
|  | #define CHECK_VAR(a)   { std::cerr << __FILE__ << "@l" << __LINE__ << " on "<< grid->ThisRank() << ": " << __func__ << " " << #a << "=" << (a) << std::endl; } | ||||||
|  | // #undef CHECK | ||||||
|  | // #define CHECK | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | class ParRdr { | ||||||
|  | private: | ||||||
|  |   bool const swap; | ||||||
|  |  | ||||||
|  |   MPI_Status status; | ||||||
|  |   MPI_File   fp; | ||||||
|  |  | ||||||
|  |   int err; | ||||||
|  |  | ||||||
|  |   MPI_Datatype oddSiteType; | ||||||
|  |   MPI_Datatype fileViewType; | ||||||
|  |  | ||||||
|  |   GridBase* grid; | ||||||
|  |  | ||||||
|  | public: | ||||||
|  |   ParRdr(MPI_Comm comm, std::string const& filename, GridBase* gridPtr) | ||||||
|  |     : swap(false) | ||||||
|  |     , grid(gridPtr) { | ||||||
|  |     err = MPI_File_open(comm, const_cast<char*>(filename.c_str()), MPI_MODE_RDONLY, MPI_INFO_NULL, &fp); | ||||||
|  |     assert(err == MPI_SUCCESS); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   virtual ~ParRdr() { MPI_File_close(&fp); } | ||||||
|  |  | ||||||
|  |   inline void errInfo(int const err, std::string const& func) { | ||||||
|  |     static char estring[MPI_MAX_ERROR_STRING]; | ||||||
|  |     int         eclass = -1, len = 0; | ||||||
|  |     MPI_Error_class(err, &eclass); | ||||||
|  |     MPI_Error_string(err, estring, &len); | ||||||
|  |     std::cerr << func << " - Error " << eclass << ": " << estring << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int readHeader(FieldMetaData& field) { | ||||||
|  |     assert((grid->_ndimension == Nd) && (Nd == 4)); | ||||||
|  |     assert(Nc == 3); | ||||||
|  |  | ||||||
|  |     OpenQcdHeader header; | ||||||
|  |  | ||||||
|  |     readBlock(reinterpret_cast<char*>(&header), 0, sizeof(OpenQcdHeader), MPI_CHAR); | ||||||
|  |  | ||||||
|  |     header.plaq /= 3.; // TODO change this into normalizationfactor | ||||||
|  |  | ||||||
|  |     // sanity check (should trigger on endian issues) TODO remove? | ||||||
|  |     assert(0 < header.Nt && header.Nt <= 1024); | ||||||
|  |     assert(0 < header.Nx && header.Nx <= 1024); | ||||||
|  |     assert(0 < header.Ny && header.Ny <= 1024); | ||||||
|  |     assert(0 < header.Nz && header.Nz <= 1024); | ||||||
|  |  | ||||||
|  |     field.dimension[0] = header.Nx; | ||||||
|  |     field.dimension[1] = header.Ny; | ||||||
|  |     field.dimension[2] = header.Nz; | ||||||
|  |     field.dimension[3] = header.Nt; | ||||||
|  |  | ||||||
|  |     for(int d = 0; d < Nd; d++) | ||||||
|  |       assert(grid->FullDimensions()[d] == field.dimension[d]); | ||||||
|  |  | ||||||
|  |     field.plaquette = header.plaq; | ||||||
|  |  | ||||||
|  |     field.data_start = sizeof(OpenQcdHeader); | ||||||
|  |  | ||||||
|  |     return field.data_start; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void readBlock(void* const dest, uint64_t const pos, uint64_t const nbytes, MPI_Datatype const datatype) { | ||||||
|  |     err = MPI_File_read_at_all(fp, pos, dest, nbytes, datatype, &status); | ||||||
|  |     errInfo(err, "MPI_File_read_at_all"); | ||||||
|  |     // CHECK_VAR(err) | ||||||
|  |  | ||||||
|  |     int read = -1; | ||||||
|  |     MPI_Get_count(&status, datatype, &read); | ||||||
|  |     // CHECK_VAR(read) | ||||||
|  |     assert(nbytes == (uint64_t)read); | ||||||
|  |     assert(err == MPI_SUCCESS); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void createTypes() { | ||||||
|  |     constexpr int elem_size = Nd * 2 * 2 * Nc * Nc * sizeof(double); // 2_complex 2_fwdbwd | ||||||
|  |  | ||||||
|  |     err = MPI_Type_contiguous(elem_size, MPI_BYTE, &oddSiteType); assert(err == MPI_SUCCESS); | ||||||
|  |     err = MPI_Type_commit(&oddSiteType); assert(err == MPI_SUCCESS); | ||||||
|  |  | ||||||
|  |     Coordinate const L = grid->GlobalDimensions(); | ||||||
|  |     Coordinate const l = grid->LocalDimensions(); | ||||||
|  |     Coordinate const i = grid->ThisProcessorCoor(); | ||||||
|  |  | ||||||
|  |     Coordinate sizes({L[2] / 2, L[1], L[0], L[3]}); | ||||||
|  |     Coordinate subsizes({l[2] / 2, l[1], l[0], l[3]}); | ||||||
|  |     Coordinate starts({i[2] * l[2] / 2, i[1] * l[1], i[0] * l[0], i[3] * l[3]}); | ||||||
|  |  | ||||||
|  |     err = MPI_Type_create_subarray(grid->_ndimension, &sizes[0], &subsizes[0], &starts[0], MPI_ORDER_FORTRAN, oddSiteType, &fileViewType); assert(err == MPI_SUCCESS); | ||||||
|  |     err = MPI_Type_commit(&fileViewType); assert(err == MPI_SUCCESS); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void freeTypes() { | ||||||
|  |     err = MPI_Type_free(&fileViewType); assert(err == MPI_SUCCESS); | ||||||
|  |     err = MPI_Type_free(&oddSiteType); assert(err == MPI_SUCCESS); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   bool readGauge(std::vector<ColourMatrixD>& domain_buff, FieldMetaData& meta) { | ||||||
|  |     auto hdr_offset = readHeader(meta); | ||||||
|  |     CHECK | ||||||
|  |     createTypes(); | ||||||
|  |     err = MPI_File_set_view(fp, hdr_offset, oddSiteType, fileViewType, "native", MPI_INFO_NULL); errInfo(err, "MPI_File_set_view0"); assert(err == MPI_SUCCESS); | ||||||
|  |     CHECK | ||||||
|  |     int const domainSites = grid->lSites(); | ||||||
|  |     domain_buff.resize(Nd * domainSites); // 2_fwdbwd * 4_Nd * domainSites / 2_onlyodd | ||||||
|  |  | ||||||
|  |     // the actual READ | ||||||
|  |     constexpr uint64_t cm_size   = 2 * Nc * Nc * sizeof(double);    // 2_complex | ||||||
|  |     constexpr uint64_t os_size   = Nd * 2 * cm_size;                // 2_fwdbwd | ||||||
|  |     constexpr uint64_t max_elems = std::numeric_limits<int>::max(); // int adressable elems: floor is fine | ||||||
|  |     uint64_t const     n_os      = domainSites / 2; | ||||||
|  |  | ||||||
|  |     for(uint64_t os_idx = 0; os_idx < n_os;) { | ||||||
|  |       uint64_t const read_os = os_idx + max_elems <= n_os ? max_elems : n_os - os_idx; | ||||||
|  |       uint64_t const cm      = os_idx * Nd * 2; | ||||||
|  |       readBlock(&(domain_buff[cm]), os_idx, read_os, oddSiteType); | ||||||
|  |       os_idx += read_os; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     CHECK | ||||||
|  |     err = MPI_File_set_view(fp, 0, MPI_BYTE, MPI_BYTE, "native", MPI_INFO_NULL); | ||||||
|  |   errInfo(err, "MPI_File_set_view1"); | ||||||
|  |     assert(err == MPI_SUCCESS); | ||||||
|  |     freeTypes(); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "read sum: " << n_os * os_size << " bytes" << std::endl; | ||||||
|  |     return true; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | class OpenQcdIOChromaReference : public BinaryIO { | ||||||
|  | public: | ||||||
|  |   template<class vsimd> | ||||||
|  |   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||||
|  |                                        Grid::FieldMetaData&                  header, | ||||||
|  |                                        std::string                           file) { | ||||||
|  |     typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubledGaugeField; | ||||||
|  |  | ||||||
|  |     assert(Ns == 4 and Nd == 4 and Nc == 3); | ||||||
|  |  | ||||||
|  |     auto grid = Umu.Grid(); | ||||||
|  |  | ||||||
|  |     typedef ColourMatrixD fobj; | ||||||
|  |  | ||||||
|  |     std::vector<fobj> iodata( | ||||||
|  |       Nd * grid->lSites()); // actual size = 2*Nd*lsites but have only lsites/2 sites in file | ||||||
|  |  | ||||||
|  |     { | ||||||
|  |       ParRdr rdr(MPI_COMM_WORLD, file, grid); | ||||||
|  |       rdr.readGauge(iodata, header); | ||||||
|  |     } // equivalent to using binaryio | ||||||
|  |  | ||||||
|  |     std::vector<iDoubleStoredColourMatrix<typename vsimd::scalar_type>> Umu_ds_scalar(grid->lSites()); | ||||||
|  |  | ||||||
|  |     copyToLatticeObject(Umu_ds_scalar, iodata, grid); // equivalent to munging | ||||||
|  |  | ||||||
|  |     DoubledGaugeField Umu_ds(grid); | ||||||
|  |  | ||||||
|  |     vectorizeFromLexOrdArray(Umu_ds_scalar, Umu_ds); | ||||||
|  |  | ||||||
|  |     redistribute(Umu, Umu_ds); // equivalent to undoDoublestore | ||||||
|  |  | ||||||
|  |     FieldMetaData clone(header); | ||||||
|  |  | ||||||
|  |     PeriodicGaugeStatistics Stats; Stats(Umu, clone); | ||||||
|  |  | ||||||
|  |     RealD plaq_diff = fabs(clone.plaquette - header.plaquette); | ||||||
|  |  | ||||||
|  |     // clang-format off | ||||||
|  |     std::cout << GridLogMessage << "OpenQcd Configuration " << file | ||||||
|  |               << " plaquette " << clone.plaquette | ||||||
|  |               << " header " << header.plaquette | ||||||
|  |               << " difference " << plaq_diff | ||||||
|  |               << std::endl; | ||||||
|  |     // clang-format on | ||||||
|  |  | ||||||
|  |     RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15; | ||||||
|  |     RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code | ||||||
|  |  | ||||||
|  |     if(plaq_diff >= tol) | ||||||
|  |       std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl; | ||||||
|  |     assert(plaq_diff < tol); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | private: | ||||||
|  |   template<class vsimd> | ||||||
|  |   static inline void redistribute(Lattice<iLorentzColourMatrix<vsimd>>&            Umu, | ||||||
|  |                                   Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) { | ||||||
|  |     Grid::conformable(Umu.Grid(), Umu_ds.Grid()); | ||||||
|  |     Lattice<iColourMatrix<vsimd>> U(Umu.Grid()); | ||||||
|  |  | ||||||
|  |     U = PeekIndex<LorentzIndex>(Umu_ds, 2) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 3), 0, +1); PokeIndex<LorentzIndex>(Umu, U, 0); | ||||||
|  |     U = PeekIndex<LorentzIndex>(Umu_ds, 4) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 5), 1, +1); PokeIndex<LorentzIndex>(Umu, U, 1); | ||||||
|  |     U = PeekIndex<LorentzIndex>(Umu_ds, 6) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 7), 2, +1); PokeIndex<LorentzIndex>(Umu, U, 2); | ||||||
|  |     U = PeekIndex<LorentzIndex>(Umu_ds, 0) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 1), 3, +1); PokeIndex<LorentzIndex>(Umu, U, 3); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   static inline void copyToLatticeObject(std::vector<DoubleStoredColourMatrix>& u_fb, | ||||||
|  |                                          std::vector<ColourMatrixD> const&      node_buff, | ||||||
|  |                                          GridBase*                              grid) { | ||||||
|  |     assert(node_buff.size() == Nd * grid->lSites()); | ||||||
|  |  | ||||||
|  |     Coordinate const& l = grid->LocalDimensions(); | ||||||
|  |  | ||||||
|  |     Coordinate coord(Nd); | ||||||
|  |     int&       x = coord[0]; | ||||||
|  |     int&       y = coord[1]; | ||||||
|  |     int&       z = coord[2]; | ||||||
|  |     int&       t = coord[3]; | ||||||
|  |  | ||||||
|  |     int buff_idx = 0; | ||||||
|  |     for(t = 0; t < l[3]; ++t) // IMPORTANT: openQCD file ordering | ||||||
|  |       for(x = 0; x < l[0]; ++x) | ||||||
|  |         for(y = 0; y < l[1]; ++y) | ||||||
|  |           for(z = 0; z < l[2]; ++z) { | ||||||
|  |             if((t + z + y + x) % 2 == 0) continue; | ||||||
|  |  | ||||||
|  |             int local_idx; | ||||||
|  |             Lexicographic::IndexFromCoor(coord, local_idx, grid->LocalDimensions()); | ||||||
|  |             for(int mu = 0; mu < 2 * Nd; ++mu) | ||||||
|  |               for(int c1 = 0; c1 < Nc; ++c1) { | ||||||
|  |                 for(int c2 = 0; c2 < Nc; ++c2) { | ||||||
|  |                   u_fb[local_idx](mu)()(c1,c2) = node_buff[mu+buff_idx]()()(c1,c2); | ||||||
|  |                 } | ||||||
|  |               } | ||||||
|  |             buff_idx += 2 * Nd; | ||||||
|  |           } | ||||||
|  |  | ||||||
|  |     assert(node_buff.size() == buff_idx); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -44,7 +44,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <sys/syscall.h> | #include <sys/syscall.h> | ||||||
| #endif | #endif | ||||||
| #ifdef __x86_64__ | #ifdef __x86_64__ | ||||||
| #ifdef GRID_NVCC | #ifdef GRID_CUDA | ||||||
| accelerator_inline uint64_t __rdtsc(void) {  return 0; } | accelerator_inline uint64_t __rdtsc(void) {  return 0; } | ||||||
| accelerator_inline uint64_t __rdpmc(int ) {  return 0; } | accelerator_inline uint64_t __rdpmc(int ) {  return 0; } | ||||||
| #else | #else | ||||||
| @@ -95,7 +95,8 @@ inline uint64_t cyclecount(void){ | |||||||
| } | } | ||||||
| #elif defined __x86_64__ | #elif defined __x86_64__ | ||||||
| inline uint64_t cyclecount(void){  | inline uint64_t cyclecount(void){  | ||||||
|   return __rdtsc(); |   uint64_t ret = __rdtsc(); | ||||||
|  |   return (uint64_t)ret; | ||||||
| } | } | ||||||
| #else | #else | ||||||
|  |  | ||||||
| @@ -111,7 +112,6 @@ class PerformanceCounter { | |||||||
| private: | private: | ||||||
|  |  | ||||||
|   typedef struct {  |   typedef struct {  | ||||||
|   public: |  | ||||||
|     uint32_t type; |     uint32_t type; | ||||||
|     uint64_t config; |     uint64_t config; | ||||||
|     const char *name; |     const char *name; | ||||||
|   | |||||||
| @@ -110,15 +110,15 @@ public: | |||||||
| #endif | #endif | ||||||
|     accumulator = std::chrono::duration_cast<GridUsecs>(start-start);  |     accumulator = std::chrono::duration_cast<GridUsecs>(start-start);  | ||||||
|   } |   } | ||||||
|   GridTime Elapsed(void) { |   GridTime Elapsed(void) const { | ||||||
|     assert(running == false); |     assert(running == false); | ||||||
|     return std::chrono::duration_cast<GridTime>( accumulator ); |     return std::chrono::duration_cast<GridTime>( accumulator ); | ||||||
|   } |   } | ||||||
|   uint64_t useconds(void){ |   uint64_t useconds(void) const { | ||||||
|     assert(running == false); |     assert(running == false); | ||||||
|     return (uint64_t) accumulator.count(); |     return (uint64_t) accumulator.count(); | ||||||
|   } |   } | ||||||
|   bool isRunning(void){ |   bool isRunning(void) const { | ||||||
|     return running; |     return running; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|   | |||||||
| @@ -12773,7 +12773,7 @@ namespace pugi | |||||||
| #undef PUGI__THROW_ERROR | #undef PUGI__THROW_ERROR | ||||||
| #undef PUGI__CHECK_ERROR | #undef PUGI__CHECK_ERROR | ||||||
|  |  | ||||||
| #ifdef GRID_NVCC | #ifdef GRID_CUDA | ||||||
| #pragma pop | #pragma pop | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|   | |||||||
| @@ -47,7 +47,7 @@ static constexpr int Ym = 5; | |||||||
| static constexpr int Zm = 6; | static constexpr int Zm = 6; | ||||||
| static constexpr int Tm = 7; | static constexpr int Tm = 7; | ||||||
|  |  | ||||||
| static constexpr int Nc=3; | static constexpr int Nc=Config_Nc; | ||||||
| static constexpr int Ns=4; | static constexpr int Ns=4; | ||||||
| static constexpr int Nd=4; | static constexpr int Nd=4; | ||||||
| static constexpr int Nhs=2; // half spinor | static constexpr int Nhs=2; // half spinor | ||||||
| @@ -80,6 +80,13 @@ template<typename T> struct isSpinor { | |||||||
| template <typename T> using IfSpinor    = Invoke<std::enable_if< isSpinor<T>::value,int> > ; | template <typename T> using IfSpinor    = Invoke<std::enable_if< isSpinor<T>::value,int> > ; | ||||||
| template <typename T> using IfNotSpinor = Invoke<std::enable_if<!isSpinor<T>::value,int> > ; | template <typename T> using IfNotSpinor = Invoke<std::enable_if<!isSpinor<T>::value,int> > ; | ||||||
|  |  | ||||||
|  | const int CoarseIndex = 4; | ||||||
|  | template<typename T> struct isCoarsened { | ||||||
|  |    static constexpr bool value = (CoarseIndex<=T::TensorLevel); | ||||||
|  | }; | ||||||
|  | template <typename T> using IfCoarsened    = Invoke<std::enable_if< isCoarsened<T>::value,int> > ; | ||||||
|  | template <typename T> using IfNotCoarsened = Invoke<std::enable_if<!isCoarsened<T>::value,int> > ; | ||||||
|  |  | ||||||
| // ChrisK very keen to add extra space for Gparity doubling. | // ChrisK very keen to add extra space for Gparity doubling. | ||||||
| // | // | ||||||
| // Also add domain wall index, in a way where Wilson operator  | // Also add domain wall index, in a way where Wilson operator  | ||||||
| @@ -133,23 +140,23 @@ typedef iSpinColourMatrix<vComplex >    vSpinColourMatrix; | |||||||
| typedef iSpinColourMatrix<vComplexF>    vSpinColourMatrixF; | typedef iSpinColourMatrix<vComplexF>    vSpinColourMatrixF; | ||||||
| typedef iSpinColourMatrix<vComplexD>    vSpinColourMatrixD; | typedef iSpinColourMatrix<vComplexD>    vSpinColourMatrixD; | ||||||
|  |  | ||||||
|     // SpinColourSpinColour matrix | // SpinColourSpinColour matrix | ||||||
|     typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix; | typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix; | ||||||
|     typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF; | typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF; | ||||||
|     typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD; | typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD; | ||||||
|  |  | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix; | typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix; | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF; | typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF; | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD; | typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD; | ||||||
|  |  | ||||||
|     // SpinColourSpinColour matrix | // SpinColourSpinColour matrix | ||||||
|     typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix; | typedef iSpinColourSpinColourMatrix<Complex  >    SpinColourSpinColourMatrix; | ||||||
|     typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF; | typedef iSpinColourSpinColourMatrix<ComplexF >    SpinColourSpinColourMatrixF; | ||||||
|     typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD; | typedef iSpinColourSpinColourMatrix<ComplexD >    SpinColourSpinColourMatrixD; | ||||||
|  |  | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix; | typedef iSpinColourSpinColourMatrix<vComplex >    vSpinColourSpinColourMatrix; | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF; | typedef iSpinColourSpinColourMatrix<vComplexF>    vSpinColourSpinColourMatrixF; | ||||||
|     typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD; | typedef iSpinColourSpinColourMatrix<vComplexD>    vSpinColourSpinColourMatrixD; | ||||||
|  |  | ||||||
| // LorentzColour | // LorentzColour | ||||||
| typedef iLorentzColourMatrix<Complex  > LorentzColourMatrix; | typedef iLorentzColourMatrix<Complex  > LorentzColourMatrix; | ||||||
| @@ -443,16 +450,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz | |||||||
| ////////////////////////////////////////////// | ////////////////////////////////////////////// | ||||||
| // Fermion <-> propagator assignements | // Fermion <-> propagator assignements | ||||||
| ////////////////////////////////////////////// | ////////////////////////////////////////////// | ||||||
|     //template <class Prop, class Ferm> | //template <class Prop, class Ferm> | ||||||
|     template <class Fimpl> | template <class Fimpl> | ||||||
|       void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c) | void FermToProp(typename Fimpl::PropagatorField &p, const typename Fimpl::FermionField &f, const int s, const int c) | ||||||
| { | { | ||||||
|   for(int j = 0; j < Ns; ++j) |   for(int j = 0; j < Ns; ++j) | ||||||
|     { |     { | ||||||
|       auto pjs = peekSpin(p, j, s); |       auto pjs = peekSpin(p, j, s); | ||||||
|       auto fj  = peekSpin(f, j); |       auto fj  = peekSpin(f, j); | ||||||
|              |              | ||||||
|             for(int i = 0; i < Fimpl::Dimension; ++i) |       for(int i = 0; i < Fimpl::Dimension; ++i) | ||||||
| 	{ | 	{ | ||||||
| 	  pokeColour(pjs, peekColour(fj, i), i, c); | 	  pokeColour(pjs, peekColour(fj, i), i, c); | ||||||
| 	} | 	} | ||||||
| @@ -460,16 +467,16 @@ template<class vobj> void pokeLorentz(vobj &lhs,const decltype(peekIndex<Lorentz | |||||||
|     } |     } | ||||||
| } | } | ||||||
|      |      | ||||||
|     //template <class Prop, class Ferm> | //template <class Prop, class Ferm> | ||||||
|     template <class Fimpl> | template <class Fimpl> | ||||||
|       void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c) | void PropToFerm(typename Fimpl::FermionField &f, const typename Fimpl::PropagatorField &p, const int s, const int c) | ||||||
| { | { | ||||||
|   for(int j = 0; j < Ns; ++j) |   for(int j = 0; j < Ns; ++j) | ||||||
|     { |     { | ||||||
|       auto pjs = peekSpin(p, j, s); |       auto pjs = peekSpin(p, j, s); | ||||||
|       auto fj  = peekSpin(f, j); |       auto fj  = peekSpin(f, j); | ||||||
|              |              | ||||||
|             for(int i = 0; i < Fimpl::Dimension; ++i) |       for(int i = 0; i < Fimpl::Dimension; ++i) | ||||||
| 	{ | 	{ | ||||||
| 	  pokeColour(fj, peekColour(pjs, i, c), i); | 	  pokeColour(fj, peekColour(pjs, i, c), i); | ||||||
| 	} | 	} | ||||||
|   | |||||||
| @@ -41,7 +41,7 @@ class Action | |||||||
| public: | public: | ||||||
|   bool is_smeared = false; |   bool is_smeared = false; | ||||||
|   // Heatbath? |   // Heatbath? | ||||||
|   virtual void refresh(const GaugeField& U, GridParallelRNG& pRNG) = 0; // refresh pseudofermions |   virtual void refresh(const GaugeField& U, GridSerialRNG &sRNG, GridParallelRNG& pRNG) = 0; // refresh pseudofermions | ||||||
|   virtual RealD S(const GaugeField& U) = 0;                             // evaluate the action |   virtual RealD S(const GaugeField& U) = 0;                             // evaluate the action | ||||||
|   virtual void deriv(const GaugeField& U, GaugeField& dSdU) = 0;        // evaluate the action derivative |   virtual void deriv(const GaugeField& U, GaugeField& dSdU) = 0;        // evaluate the action derivative | ||||||
|   virtual std::string action_name()    = 0;                             // return the action name |   virtual std::string action_name()    = 0;                             // return the action name | ||||||
|   | |||||||
| @@ -40,8 +40,8 @@ public: | |||||||
| public: | public: | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD  M    (const FermionField &in, FermionField &out); |   virtual void   M    (const FermionField &in, FermionField &out); | ||||||
|   virtual RealD  Mdag (const FermionField &in, FermionField &out); |   virtual void   Mdag (const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|   // half checkerboard operations |   // half checkerboard operations | ||||||
|   virtual void   Meooe       (const FermionField &in, FermionField &out); |   virtual void   Meooe       (const FermionField &in, FermionField &out); | ||||||
| @@ -141,7 +141,33 @@ public: | |||||||
|   Vector<iSinglet<Simd> >  MatpInvDag; |   Vector<iSinglet<Simd> >  MatpInvDag; | ||||||
|   Vector<iSinglet<Simd> >  MatmInvDag; |   Vector<iSinglet<Simd> >  MatmInvDag; | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Conserved current utilities | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  |   // Virtual can't template | ||||||
|  |   void ContractConservedCurrent(PropagatorField &q_in_1, | ||||||
|  | 				PropagatorField &q_in_2, | ||||||
|  | 				PropagatorField &q_out, | ||||||
|  | 				PropagatorField &phys_src, | ||||||
|  | 				Current curr_type,  | ||||||
|  | 				unsigned int mu); | ||||||
|  |  | ||||||
|  |    void SeqConservedCurrent(PropagatorField &q_in, | ||||||
|  | 			   PropagatorField &q_out, | ||||||
|  | 			   PropagatorField &phys_src, | ||||||
|  | 			   Current curr_type, | ||||||
|  | 			   unsigned int mu, | ||||||
|  | 			   unsigned int tmin, | ||||||
|  | 			   unsigned int tmax, | ||||||
|  | 			   ComplexField &lattice_cmplx); | ||||||
|  |  | ||||||
|  |   void ContractJ5q(PropagatorField &q_in,ComplexField &J5q); | ||||||
|  |   void ContractJ5q(FermionField &q_in,ComplexField &J5q); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|   // Constructors |   // Constructors | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|   CayleyFermion5D(GaugeField &_Umu, |   CayleyFermion5D(GaugeField &_Umu, | ||||||
| 		  GridCartesian         &FiveDimGrid, | 		  GridCartesian         &FiveDimGrid, | ||||||
| 		  GridRedBlackCartesian &FiveDimRedBlackGrid, | 		  GridRedBlackCartesian &FiveDimRedBlackGrid, | ||||||
|   | |||||||
| @@ -41,8 +41,8 @@ public: | |||||||
| public: | public: | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD  M    (const FermionField &in, FermionField &out); |   virtual void   M    (const FermionField &in, FermionField &out); | ||||||
|   virtual RealD  Mdag (const FermionField &in, FermionField &out); |   virtual void   Mdag (const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|   // half checkerboard operaions |   // half checkerboard operaions | ||||||
|   virtual void   Meooe       (const FermionField &in, FermionField &out); |   virtual void   Meooe       (const FermionField &in, FermionField &out); | ||||||
|   | |||||||
| @@ -53,8 +53,8 @@ public: | |||||||
|   virtual void  DtildeInv  (const FermionField& in, FermionField& out); |   virtual void  DtildeInv  (const FermionField& in, FermionField& out); | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD M          (const FermionField& in, FermionField& out); |   virtual void  M          (const FermionField& in, FermionField& out); | ||||||
|   virtual RealD Mdag       (const FermionField& in, FermionField& out); |   virtual void  Mdag       (const FermionField& in, FermionField& out); | ||||||
|  |  | ||||||
|   // half checkerboard operations |   // half checkerboard operations | ||||||
|   virtual void  Mooee      (const FermionField& in, FermionField& out); |   virtual void  Mooee      (const FermionField& in, FermionField& out); | ||||||
|   | |||||||
| @@ -115,18 +115,21 @@ public: | |||||||
|       PokeIndex<LorentzIndex>(Uadj, U, mu); |       PokeIndex<LorentzIndex>(Uadj, U, mu); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     for (int lidx = 0; lidx < GaugeGrid->lSites(); lidx++) { |     autoView(Umu_v,Umu,CpuRead); | ||||||
|  |     autoView(Uadj_v,Uadj,CpuRead); | ||||||
|  |     autoView(Uds_v,Uds,CpuWrite); | ||||||
|  |     thread_for( lidx, GaugeGrid->lSites(), { | ||||||
|       Coordinate lcoor; |       Coordinate lcoor; | ||||||
|       GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor); |       GaugeGrid->LocalIndexToLocalCoor(lidx, lcoor); | ||||||
|        |        | ||||||
|       peekLocalSite(ScalarUmu, Umu, lcoor); |       peekLocalSite(ScalarUmu, Umu_v, lcoor); | ||||||
|       for (int mu = 0; mu < 4; mu++) ScalarUds(mu) = ScalarUmu(mu); |       for (int mu = 0; mu < 4; mu++) ScalarUds(mu) = ScalarUmu(mu); | ||||||
|        |        | ||||||
|       peekLocalSite(ScalarUmu, Uadj, lcoor); |       peekLocalSite(ScalarUmu, Uadj_v, lcoor); | ||||||
|       for (int mu = 0; mu < 4; mu++) ScalarUds(mu + 4) = ScalarUmu(mu); |       for (int mu = 0; mu < 4; mu++) ScalarUds(mu + 4) = ScalarUmu(mu); | ||||||
|        |        | ||||||
|       pokeLocalSite(ScalarUds, Uds, lcoor); |       pokeLocalSite(ScalarUds, Uds_v, lcoor); | ||||||
|     } |     }); | ||||||
|   } |   } | ||||||
|        |        | ||||||
|   inline void InsertForce4D(GaugeField &mat, FermionField &Btilde,FermionField &A, int mu)  |   inline void InsertForce4D(GaugeField &mat, FermionField &Btilde,FermionField &A, int mu)  | ||||||
|   | |||||||
| @@ -57,6 +57,7 @@ NAMESPACE_CHECK(WilsonClover); | |||||||
| #include <Grid/qcd/action/fermion/WilsonFermion5D.h>     // 5d base used by all 5d overlap types | #include <Grid/qcd/action/fermion/WilsonFermion5D.h>     // 5d base used by all 5d overlap types | ||||||
| NAMESPACE_CHECK(Wilson5D); | NAMESPACE_CHECK(Wilson5D); | ||||||
|  |  | ||||||
|  | #include <Grid/qcd/action/fermion/NaiveStaggeredFermion.h> | ||||||
| #include <Grid/qcd/action/fermion/ImprovedStaggeredFermion.h> | #include <Grid/qcd/action/fermion/ImprovedStaggeredFermion.h> | ||||||
| #include <Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h> | #include <Grid/qcd/action/fermion/ImprovedStaggeredFermion5D.h> | ||||||
| NAMESPACE_CHECK(Staggered); | NAMESPACE_CHECK(Staggered); | ||||||
| @@ -114,9 +115,9 @@ typedef WilsonFermion<WilsonImplR> WilsonFermionR; | |||||||
| typedef WilsonFermion<WilsonImplF> WilsonFermionF; | typedef WilsonFermion<WilsonImplF> WilsonFermionF; | ||||||
| typedef WilsonFermion<WilsonImplD> WilsonFermionD; | typedef WilsonFermion<WilsonImplD> WilsonFermionD; | ||||||
|  |  | ||||||
| typedef WilsonFermion<WilsonImplRL> WilsonFermionRL; | //typedef WilsonFermion<WilsonImplRL> WilsonFermionRL; | ||||||
| typedef WilsonFermion<WilsonImplFH> WilsonFermionFH; | //typedef WilsonFermion<WilsonImplFH> WilsonFermionFH; | ||||||
| typedef WilsonFermion<WilsonImplDF> WilsonFermionDF; | //typedef WilsonFermion<WilsonImplDF> WilsonFermionDF; | ||||||
|  |  | ||||||
| typedef WilsonFermion<WilsonAdjImplR> WilsonAdjFermionR; | typedef WilsonFermion<WilsonAdjImplR> WilsonAdjFermionR; | ||||||
| typedef WilsonFermion<WilsonAdjImplF> WilsonAdjFermionF; | typedef WilsonFermion<WilsonAdjImplF> WilsonAdjFermionF; | ||||||
| @@ -157,41 +158,41 @@ typedef DomainWallFermion<WilsonImplR> DomainWallFermionR; | |||||||
| typedef DomainWallFermion<WilsonImplF> DomainWallFermionF; | typedef DomainWallFermion<WilsonImplF> DomainWallFermionF; | ||||||
| typedef DomainWallFermion<WilsonImplD> DomainWallFermionD; | typedef DomainWallFermion<WilsonImplD> DomainWallFermionD; | ||||||
|  |  | ||||||
| typedef DomainWallFermion<WilsonImplRL> DomainWallFermionRL; | //typedef DomainWallFermion<WilsonImplRL> DomainWallFermionRL; | ||||||
| typedef DomainWallFermion<WilsonImplFH> DomainWallFermionFH; | //typedef DomainWallFermion<WilsonImplFH> DomainWallFermionFH; | ||||||
| typedef DomainWallFermion<WilsonImplDF> DomainWallFermionDF; | //typedef DomainWallFermion<WilsonImplDF> DomainWallFermionDF; | ||||||
|  |  | ||||||
| typedef DomainWallEOFAFermion<WilsonImplR> DomainWallEOFAFermionR; | typedef DomainWallEOFAFermion<WilsonImplR> DomainWallEOFAFermionR; | ||||||
| typedef DomainWallEOFAFermion<WilsonImplF> DomainWallEOFAFermionF; | typedef DomainWallEOFAFermion<WilsonImplF> DomainWallEOFAFermionF; | ||||||
| typedef DomainWallEOFAFermion<WilsonImplD> DomainWallEOFAFermionD; | typedef DomainWallEOFAFermion<WilsonImplD> DomainWallEOFAFermionD; | ||||||
|  |  | ||||||
| typedef DomainWallEOFAFermion<WilsonImplRL> DomainWallEOFAFermionRL; | //typedef DomainWallEOFAFermion<WilsonImplRL> DomainWallEOFAFermionRL; | ||||||
| typedef DomainWallEOFAFermion<WilsonImplFH> DomainWallEOFAFermionFH; | //typedef DomainWallEOFAFermion<WilsonImplFH> DomainWallEOFAFermionFH; | ||||||
| typedef DomainWallEOFAFermion<WilsonImplDF> DomainWallEOFAFermionDF; | //typedef DomainWallEOFAFermion<WilsonImplDF> DomainWallEOFAFermionDF; | ||||||
|  |  | ||||||
| typedef MobiusFermion<WilsonImplR> MobiusFermionR; | typedef MobiusFermion<WilsonImplR> MobiusFermionR; | ||||||
| typedef MobiusFermion<WilsonImplF> MobiusFermionF; | typedef MobiusFermion<WilsonImplF> MobiusFermionF; | ||||||
| typedef MobiusFermion<WilsonImplD> MobiusFermionD; | typedef MobiusFermion<WilsonImplD> MobiusFermionD; | ||||||
|  |  | ||||||
| typedef MobiusFermion<WilsonImplRL> MobiusFermionRL; | //typedef MobiusFermion<WilsonImplRL> MobiusFermionRL; | ||||||
| typedef MobiusFermion<WilsonImplFH> MobiusFermionFH; | //typedef MobiusFermion<WilsonImplFH> MobiusFermionFH; | ||||||
| typedef MobiusFermion<WilsonImplDF> MobiusFermionDF; | //typedef MobiusFermion<WilsonImplDF> MobiusFermionDF; | ||||||
|  |  | ||||||
| typedef MobiusEOFAFermion<WilsonImplR> MobiusEOFAFermionR; | typedef MobiusEOFAFermion<WilsonImplR> MobiusEOFAFermionR; | ||||||
| typedef MobiusEOFAFermion<WilsonImplF> MobiusEOFAFermionF; | typedef MobiusEOFAFermion<WilsonImplF> MobiusEOFAFermionF; | ||||||
| typedef MobiusEOFAFermion<WilsonImplD> MobiusEOFAFermionD; | typedef MobiusEOFAFermion<WilsonImplD> MobiusEOFAFermionD; | ||||||
|  |  | ||||||
| typedef MobiusEOFAFermion<WilsonImplRL> MobiusEOFAFermionRL; | //typedef MobiusEOFAFermion<WilsonImplRL> MobiusEOFAFermionRL; | ||||||
| typedef MobiusEOFAFermion<WilsonImplFH> MobiusEOFAFermionFH; | //typedef MobiusEOFAFermion<WilsonImplFH> MobiusEOFAFermionFH; | ||||||
| typedef MobiusEOFAFermion<WilsonImplDF> MobiusEOFAFermionDF; | //typedef MobiusEOFAFermion<WilsonImplDF> MobiusEOFAFermionDF; | ||||||
|  |  | ||||||
| typedef ZMobiusFermion<ZWilsonImplR> ZMobiusFermionR; | typedef ZMobiusFermion<ZWilsonImplR> ZMobiusFermionR; | ||||||
| typedef ZMobiusFermion<ZWilsonImplF> ZMobiusFermionF; | typedef ZMobiusFermion<ZWilsonImplF> ZMobiusFermionF; | ||||||
| typedef ZMobiusFermion<ZWilsonImplD> ZMobiusFermionD; | typedef ZMobiusFermion<ZWilsonImplD> ZMobiusFermionD; | ||||||
|  |  | ||||||
| typedef ZMobiusFermion<ZWilsonImplRL> ZMobiusFermionRL; | //typedef ZMobiusFermion<ZWilsonImplRL> ZMobiusFermionRL; | ||||||
| typedef ZMobiusFermion<ZWilsonImplFH> ZMobiusFermionFH; | //typedef ZMobiusFermion<ZWilsonImplFH> ZMobiusFermionFH; | ||||||
| typedef ZMobiusFermion<ZWilsonImplDF> ZMobiusFermionDF; | //typedef ZMobiusFermion<ZWilsonImplDF> ZMobiusFermionDF; | ||||||
|  |  | ||||||
| // Ls vectorised | // Ls vectorised | ||||||
| typedef ScaledShamirFermion<WilsonImplR> ScaledShamirFermionR; | typedef ScaledShamirFermion<WilsonImplR> ScaledShamirFermionR; | ||||||
| @@ -234,64 +235,62 @@ typedef WilsonFermion<GparityWilsonImplR>     GparityWilsonFermionR; | |||||||
| typedef WilsonFermion<GparityWilsonImplF>     GparityWilsonFermionF; | typedef WilsonFermion<GparityWilsonImplF>     GparityWilsonFermionF; | ||||||
| typedef WilsonFermion<GparityWilsonImplD>     GparityWilsonFermionD; | typedef WilsonFermion<GparityWilsonImplD>     GparityWilsonFermionD; | ||||||
|  |  | ||||||
| typedef WilsonFermion<GparityWilsonImplRL>     GparityWilsonFermionRL; | //typedef WilsonFermion<GparityWilsonImplRL>     GparityWilsonFermionRL; | ||||||
| typedef WilsonFermion<GparityWilsonImplFH>     GparityWilsonFermionFH; | //typedef WilsonFermion<GparityWilsonImplFH>     GparityWilsonFermionFH; | ||||||
| typedef WilsonFermion<GparityWilsonImplDF>     GparityWilsonFermionDF; | //typedef WilsonFermion<GparityWilsonImplDF>     GparityWilsonFermionDF; | ||||||
|  |  | ||||||
| typedef DomainWallFermion<GparityWilsonImplR> GparityDomainWallFermionR; | typedef DomainWallFermion<GparityWilsonImplR> GparityDomainWallFermionR; | ||||||
| typedef DomainWallFermion<GparityWilsonImplF> GparityDomainWallFermionF; | typedef DomainWallFermion<GparityWilsonImplF> GparityDomainWallFermionF; | ||||||
| typedef DomainWallFermion<GparityWilsonImplD> GparityDomainWallFermionD; | typedef DomainWallFermion<GparityWilsonImplD> GparityDomainWallFermionD; | ||||||
|  |  | ||||||
| typedef DomainWallFermion<GparityWilsonImplRL> GparityDomainWallFermionRL; | //typedef DomainWallFermion<GparityWilsonImplRL> GparityDomainWallFermionRL; | ||||||
| typedef DomainWallFermion<GparityWilsonImplFH> GparityDomainWallFermionFH; | //typedef DomainWallFermion<GparityWilsonImplFH> GparityDomainWallFermionFH; | ||||||
| typedef DomainWallFermion<GparityWilsonImplDF> GparityDomainWallFermionDF; | //typedef DomainWallFermion<GparityWilsonImplDF> GparityDomainWallFermionDF; | ||||||
|  |  | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplR> GparityDomainWallEOFAFermionR; | typedef DomainWallEOFAFermion<GparityWilsonImplR> GparityDomainWallEOFAFermionR; | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplF> GparityDomainWallEOFAFermionF; | typedef DomainWallEOFAFermion<GparityWilsonImplF> GparityDomainWallEOFAFermionF; | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplD> GparityDomainWallEOFAFermionD; | typedef DomainWallEOFAFermion<GparityWilsonImplD> GparityDomainWallEOFAFermionD; | ||||||
|  |  | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplRL> GparityDomainWallEOFAFermionRL; | //typedef DomainWallEOFAFermion<GparityWilsonImplRL> GparityDomainWallEOFAFermionRL; | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplFH> GparityDomainWallEOFAFermionFH; | //typedef DomainWallEOFAFermion<GparityWilsonImplFH> GparityDomainWallEOFAFermionFH; | ||||||
| typedef DomainWallEOFAFermion<GparityWilsonImplDF> GparityDomainWallEOFAFermionDF; | //typedef DomainWallEOFAFermion<GparityWilsonImplDF> GparityDomainWallEOFAFermionDF; | ||||||
|  |  | ||||||
| typedef WilsonTMFermion<GparityWilsonImplR> GparityWilsonTMFermionR; | typedef WilsonTMFermion<GparityWilsonImplR> GparityWilsonTMFermionR; | ||||||
| typedef WilsonTMFermion<GparityWilsonImplF> GparityWilsonTMFermionF; | typedef WilsonTMFermion<GparityWilsonImplF> GparityWilsonTMFermionF; | ||||||
| typedef WilsonTMFermion<GparityWilsonImplD> GparityWilsonTMFermionD; | typedef WilsonTMFermion<GparityWilsonImplD> GparityWilsonTMFermionD; | ||||||
|  |  | ||||||
| typedef WilsonTMFermion<GparityWilsonImplRL> GparityWilsonTMFermionRL; | //typedef WilsonTMFermion<GparityWilsonImplRL> GparityWilsonTMFermionRL; | ||||||
| typedef WilsonTMFermion<GparityWilsonImplFH> GparityWilsonTMFermionFH; | //typedef WilsonTMFermion<GparityWilsonImplFH> GparityWilsonTMFermionFH; | ||||||
| typedef WilsonTMFermion<GparityWilsonImplDF> GparityWilsonTMFermionDF; | //typedef WilsonTMFermion<GparityWilsonImplDF> GparityWilsonTMFermionDF; | ||||||
|  |  | ||||||
| typedef MobiusFermion<GparityWilsonImplR> GparityMobiusFermionR; | typedef MobiusFermion<GparityWilsonImplR> GparityMobiusFermionR; | ||||||
| typedef MobiusFermion<GparityWilsonImplF> GparityMobiusFermionF; | typedef MobiusFermion<GparityWilsonImplF> GparityMobiusFermionF; | ||||||
| typedef MobiusFermion<GparityWilsonImplD> GparityMobiusFermionD; | typedef MobiusFermion<GparityWilsonImplD> GparityMobiusFermionD; | ||||||
|  |  | ||||||
| typedef MobiusFermion<GparityWilsonImplRL> GparityMobiusFermionRL; | //typedef MobiusFermion<GparityWilsonImplRL> GparityMobiusFermionRL; | ||||||
| typedef MobiusFermion<GparityWilsonImplFH> GparityMobiusFermionFH; | //typedef MobiusFermion<GparityWilsonImplFH> GparityMobiusFermionFH; | ||||||
| typedef MobiusFermion<GparityWilsonImplDF> GparityMobiusFermionDF; | //typedef MobiusFermion<GparityWilsonImplDF> GparityMobiusFermionDF; | ||||||
|  |  | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplR> GparityMobiusEOFAFermionR; | typedef MobiusEOFAFermion<GparityWilsonImplR> GparityMobiusEOFAFermionR; | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplF> GparityMobiusEOFAFermionF; | typedef MobiusEOFAFermion<GparityWilsonImplF> GparityMobiusEOFAFermionF; | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplD> GparityMobiusEOFAFermionD; | typedef MobiusEOFAFermion<GparityWilsonImplD> GparityMobiusEOFAFermionD; | ||||||
|  |  | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplRL> GparityMobiusEOFAFermionRL; | //typedef MobiusEOFAFermion<GparityWilsonImplRL> GparityMobiusEOFAFermionRL; | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplFH> GparityMobiusEOFAFermionFH; | //typedef MobiusEOFAFermion<GparityWilsonImplFH> GparityMobiusEOFAFermionFH; | ||||||
| typedef MobiusEOFAFermion<GparityWilsonImplDF> GparityMobiusEOFAFermionDF; | //typedef MobiusEOFAFermion<GparityWilsonImplDF> GparityMobiusEOFAFermionDF; | ||||||
|  |  | ||||||
| typedef ImprovedStaggeredFermion<StaggeredImplR> ImprovedStaggeredFermionR; | typedef ImprovedStaggeredFermion<StaggeredImplR> ImprovedStaggeredFermionR; | ||||||
| typedef ImprovedStaggeredFermion<StaggeredImplF> ImprovedStaggeredFermionF; | typedef ImprovedStaggeredFermion<StaggeredImplF> ImprovedStaggeredFermionF; | ||||||
| typedef ImprovedStaggeredFermion<StaggeredImplD> ImprovedStaggeredFermionD; | typedef ImprovedStaggeredFermion<StaggeredImplD> ImprovedStaggeredFermionD; | ||||||
|  |  | ||||||
|  | typedef NaiveStaggeredFermion<StaggeredImplR> NaiveStaggeredFermionR; | ||||||
|  | typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF; | ||||||
|  | typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD; | ||||||
|  |  | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredImplR> ImprovedStaggeredFermion5DR; | typedef ImprovedStaggeredFermion5D<StaggeredImplR> ImprovedStaggeredFermion5DR; | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredImplF> ImprovedStaggeredFermion5DF; | typedef ImprovedStaggeredFermion5D<StaggeredImplF> ImprovedStaggeredFermion5DF; | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredImplD> ImprovedStaggeredFermion5DD; | typedef ImprovedStaggeredFermion5D<StaggeredImplD> ImprovedStaggeredFermion5DD; | ||||||
|  |  | ||||||
| #ifndef GRID_NVCC |  | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplR> ImprovedStaggeredFermionVec5dR; |  | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplF> ImprovedStaggeredFermionVec5dF; |  | ||||||
| typedef ImprovedStaggeredFermion5D<StaggeredVec5dImplD> ImprovedStaggeredFermionVec5dD; |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| //////////////////// | //////////////////// | ||||||
|   | |||||||
| @@ -58,8 +58,8 @@ public: | |||||||
|   virtual GridBase *GaugeRedBlackGrid(void)   =0; |   virtual GridBase *GaugeRedBlackGrid(void)   =0; | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD  M    (const FermionField &in, FermionField &out)=0; |   virtual void  M    (const FermionField &in, FermionField &out)=0; | ||||||
|   virtual RealD  Mdag (const FermionField &in, FermionField &out)=0; |   virtual void  Mdag (const FermionField &in, FermionField &out)=0; | ||||||
|  |  | ||||||
|   // half checkerboard operaions |   // half checkerboard operaions | ||||||
|   virtual void   Meooe       (const FermionField &in, FermionField &out)=0; |   virtual void   Meooe       (const FermionField &in, FermionField &out)=0; | ||||||
| @@ -86,15 +86,14 @@ public: | |||||||
|   virtual void DhopDerivEO(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0; |   virtual void DhopDerivEO(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0; | ||||||
|   virtual void DhopDerivOE(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0; |   virtual void DhopDerivOE(GaugeField &mat,const FermionField &U,const FermionField &V,int dag)=0; | ||||||
|  |  | ||||||
|  |  | ||||||
|   virtual void  Mdiag  (const FermionField &in, FermionField &out) { Mooee(in,out);};   // Same as Mooee applied to both CB's |   virtual void  Mdiag  (const FermionField &in, FermionField &out) { Mooee(in,out);};   // Same as Mooee applied to both CB's | ||||||
|   virtual void  Mdir   (const FermionField &in, FermionField &out,int dir,int disp)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac |   virtual void  Mdir   (const FermionField &in, FermionField &out,int dir,int disp)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac | ||||||
|   virtual void  MdirAll(const FermionField &in, std::vector<FermionField> &out)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac |   virtual void  MdirAll(const FermionField &in, std::vector<FermionField> &out)=0;   // case by case Wilson, Clover, Cayley, ContFrac, PartFrac | ||||||
|  |  | ||||||
|  |  | ||||||
|       virtual void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);}; |   virtual void  MomentumSpacePropagator(FermionField &out,const FermionField &in,RealD _m,std::vector<double> twist) { assert(0);}; | ||||||
|  |  | ||||||
|       virtual void  FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist)  |   virtual void  FreePropagator(const FermionField &in,FermionField &out,RealD mass,std::vector<Complex> boundary,std::vector<double> twist)  | ||||||
|       { |       { | ||||||
| 	FFT theFFT((GridCartesian *) in.Grid()); | 	FFT theFFT((GridCartesian *) in.Grid()); | ||||||
|  |  | ||||||
| @@ -148,15 +147,19 @@ public: | |||||||
|   virtual void ContractConservedCurrent(PropagatorField &q_in_1, |   virtual void ContractConservedCurrent(PropagatorField &q_in_1, | ||||||
| 					PropagatorField &q_in_2, | 					PropagatorField &q_in_2, | ||||||
| 					PropagatorField &q_out, | 					PropagatorField &q_out, | ||||||
|  | 					PropagatorField &phys_src, | ||||||
| 					Current curr_type, | 					Current curr_type, | ||||||
| 					unsigned int mu)=0; | 					unsigned int mu) | ||||||
|  |   {assert(0);}; | ||||||
|   virtual void SeqConservedCurrent(PropagatorField &q_in,  |   virtual void SeqConservedCurrent(PropagatorField &q_in,  | ||||||
| 				   PropagatorField &q_out, | 				   PropagatorField &q_out, | ||||||
|  | 				   PropagatorField &phys_src, | ||||||
| 				   Current curr_type, | 				   Current curr_type, | ||||||
| 				   unsigned int mu, | 				   unsigned int mu, | ||||||
| 				   unsigned int tmin,  | 				   unsigned int tmin,  | ||||||
| 				   unsigned int tmax, | 				   unsigned int tmax, | ||||||
| 				   ComplexField &lattice_cmplx)=0; | 				   ComplexField &lattice_cmplx) | ||||||
|  |   {assert(0);}; | ||||||
|  |  | ||||||
|       // Only reimplemented in Wilson5D  |       // Only reimplemented in Wilson5D  | ||||||
|       // Default to just a zero correlation function |       // Default to just a zero correlation function | ||||||
|   | |||||||
| @@ -153,8 +153,8 @@ public: | |||||||
|   typedef typename Impl::StencilImpl             StencilImpl;		\ |   typedef typename Impl::StencilImpl             StencilImpl;		\ | ||||||
|   typedef typename Impl::ImplParams               ImplParams;	        \ |   typedef typename Impl::ImplParams               ImplParams;	        \ | ||||||
|   typedef typename Impl::StencilImpl::View_type  StencilView;		\ |   typedef typename Impl::StencilImpl::View_type  StencilView;		\ | ||||||
|   typedef typename ViewMap<FermionField>::Type      FermionFieldView;	\ |   typedef const typename ViewMap<FermionField>::Type      FermionFieldView;	\ | ||||||
|   typedef typename ViewMap<DoubledGaugeField>::Type DoubledGaugeFieldView; |   typedef const typename ViewMap<DoubledGaugeField>::Type DoubledGaugeFieldView; | ||||||
|  |  | ||||||
| #define INHERIT_IMPL_TYPES(Base)		\ | #define INHERIT_IMPL_TYPES(Base)		\ | ||||||
|   INHERIT_GIMPL_TYPES(Base)			\ |   INHERIT_GIMPL_TYPES(Base)			\ | ||||||
| @@ -183,7 +183,8 @@ NAMESPACE_CHECK(ImplStaggered); | |||||||
| ///////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////// | ||||||
| // Single flavour one component spinors with colour index. 5d vec | // Single flavour one component spinors with colour index. 5d vec | ||||||
| ///////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////// | ||||||
| #include <Grid/qcd/action/fermion/StaggeredVec5dImpl.h>  | // Deprecate Vec5d | ||||||
| NAMESPACE_CHECK(ImplStaggered5dVec);   | //#include <Grid/qcd/action/fermion/StaggeredVec5dImpl.h>  | ||||||
|  | //NAMESPACE_CHECK(ImplStaggered5dVec);   | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -38,6 +38,7 @@ public: | |||||||
|  static const bool isFundamental = Representation::isFundamental; |  static const bool isFundamental = Representation::isFundamental; | ||||||
|  static const int Nhcs = Options::Nhcs; |  static const int Nhcs = Options::Nhcs; | ||||||
|  static const bool LsVectorised=false; |  static const bool LsVectorised=false; | ||||||
|  |  static const bool isGparity=true; | ||||||
|  |  | ||||||
|  typedef ConjugateGaugeImpl< GaugeImplTypes<S,Dimension> > Gimpl; |  typedef ConjugateGaugeImpl< GaugeImplTypes<S,Dimension> > Gimpl; | ||||||
|  INHERIT_GIMPL_TYPES(Gimpl); |  INHERIT_GIMPL_TYPES(Gimpl); | ||||||
| @@ -46,7 +47,7 @@ public: | |||||||
|  typedef typename Options::template PrecisionMapper<Simd>::LowerPrecVector SimdL; |  typedef typename Options::template PrecisionMapper<Simd>::LowerPrecVector SimdL; | ||||||
|        |        | ||||||
|  template <typename vtype> using iImplSpinor            = iVector<iVector<iVector<vtype, Dimension>, Ns>,   Ngp>; |  template <typename vtype> using iImplSpinor            = iVector<iVector<iVector<vtype, Dimension>, Ns>,   Ngp>; | ||||||
|  template <typename vtype> using iImplPropagator        = iVector<iMatrix<iMatrix<vtype, Dimension>, Ns>,   Ngp>; |  template <typename vtype> using iImplPropagator        = iMatrix<iMatrix<iMatrix<vtype, Dimension>, Ns>,   Ngp>; | ||||||
|  template <typename vtype> using iImplHalfSpinor        = iVector<iVector<iVector<vtype, Dimension>, Nhs>,  Ngp>; |  template <typename vtype> using iImplHalfSpinor        = iVector<iVector<iVector<vtype, Dimension>, Nhs>,  Ngp>; | ||||||
|  template <typename vtype> using iImplHalfCommSpinor    = iVector<iVector<iVector<vtype, Dimension>, Nhcs>, Ngp>; |  template <typename vtype> using iImplHalfCommSpinor    = iVector<iVector<iVector<vtype, Dimension>, Nhcs>, Ngp>; | ||||||
|  template <typename vtype> using iImplDoubledGaugeField = iVector<iVector<iScalar<iMatrix<vtype, Dimension> >, Nds>, Ngp>; |  template <typename vtype> using iImplDoubledGaugeField = iVector<iVector<iScalar<iMatrix<vtype, Dimension> >, Nds>, Ngp>; | ||||||
| @@ -80,6 +81,7 @@ public: | |||||||
|   { |   { | ||||||
|     assert(0); |     assert(0); | ||||||
|   }  |   }  | ||||||
|  |  | ||||||
|   template<class _Spinor> |   template<class _Spinor> | ||||||
|   static accelerator_inline void multLink(_Spinor &phi,  |   static accelerator_inline void multLink(_Spinor &phi,  | ||||||
| 					  const SiteDoubledGaugeField &U, | 					  const SiteDoubledGaugeField &U, | ||||||
| @@ -94,43 +96,31 @@ public: | |||||||
|     int sl        = St._simd_layout[direction]; |     int sl        = St._simd_layout[direction]; | ||||||
|     Coordinate icoor; |     Coordinate icoor; | ||||||
|  |  | ||||||
| #ifdef __CUDA_ARCH__ | #ifdef GRID_SIMT | ||||||
|     _Spinor tmp; |  | ||||||
|  |  | ||||||
|     const int Nsimd =SiteDoubledGaugeField::Nsimd(); |     const int Nsimd =SiteDoubledGaugeField::Nsimd(); | ||||||
|     int s = SIMTlane(Nsimd); |     int s = acceleratorSIMTlane(Nsimd); | ||||||
|     St.iCoorFromIindex(icoor,s); |     St.iCoorFromIindex(icoor,s); | ||||||
|  |  | ||||||
|     int mmu = mu % Nd; |     int mmu = mu % Nd; | ||||||
|     if ( SE->_around_the_world && St.parameters.twists[mmu] ) { |  | ||||||
|  |  | ||||||
|       int permute_lane = (sl==1)  |     auto UU0=coalescedRead(U(0)(mu)); | ||||||
|     	|| ((distance== 1)&&(icoor[direction]==1)) |     auto UU1=coalescedRead(U(1)(mu)); | ||||||
| 	|| ((distance==-1)&&(icoor[direction]==0)); |  | ||||||
|      |      | ||||||
|       if ( permute_lane ) {  |     //Decide whether we do a G-parity flavor twist | ||||||
| 	tmp(0) = chi(1); |     //Note: this assumes (but does not check) that sl==1 || sl==2 i.e. max 2 SIMD lanes in G-parity dir | ||||||
| 	tmp(1) = chi(0); |     //It also assumes (but does not check) that abs(distance) == 1 | ||||||
|       } else { |     int permute_lane = (sl==1)  | ||||||
| 	tmp(0) = chi(0); |     || ((distance== 1)&&(icoor[direction]==1)) | ||||||
| 	tmp(1) = chi(1); |     || ((distance==-1)&&(icoor[direction]==0)); | ||||||
|       } |  | ||||||
|  |  | ||||||
|       auto UU0=coalescedRead(U(0)(mu)); |     permute_lane = permute_lane && SE->_around_the_world && St.parameters.twists[mmu]; //only if we are going around the world | ||||||
|       auto UU1=coalescedRead(U(1)(mu)); |  | ||||||
|  |  | ||||||
|       mult(&phi(0),&UU0,&tmp(0)); |     //Apply the links | ||||||
|       mult(&phi(1),&UU1,&tmp(1)); |     int f_upper = permute_lane ? 1 : 0; | ||||||
|  |     int f_lower = !f_upper; | ||||||
|  |  | ||||||
|     } else { |     mult(&phi(0),&UU0,&chi(f_upper)); | ||||||
|  |     mult(&phi(1),&UU1,&chi(f_lower)); | ||||||
|       auto UU0=coalescedRead(U(0)(mu)); |  | ||||||
|       auto UU1=coalescedRead(U(1)(mu)); |  | ||||||
|  |  | ||||||
|       mult(&phi(0),&UU0,&chi(0)); |  | ||||||
|       mult(&phi(1),&UU1,&chi(1)); |  | ||||||
|  |  | ||||||
|     } |  | ||||||
|  |  | ||||||
| #else | #else | ||||||
|     typedef _Spinor vobj; |     typedef _Spinor vobj; | ||||||
| @@ -191,6 +181,16 @@ public: | |||||||
| #endif    | #endif    | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |   template<class _SpinorField> | ||||||
|  |   inline void multLinkField(_SpinorField & out, | ||||||
|  | 			    const DoubledGaugeField &Umu, | ||||||
|  | 			    const _SpinorField & phi, | ||||||
|  | 			    int mu) | ||||||
|  |   { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|   template <class ref> |   template <class ref> | ||||||
|   static accelerator_inline void loadLinkElement(Simd ®, ref &memory)  |   static accelerator_inline void loadLinkElement(Simd ®, ref &memory)  | ||||||
|   { |   { | ||||||
| @@ -221,14 +221,16 @@ public: | |||||||
| 	Uconj = where(coor==neglink,-Uconj,Uconj); | 	Uconj = where(coor==neglink,-Uconj,Uconj); | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       auto U_v = U.View(); |       { | ||||||
|       auto Uds_v = Uds.View(); | 	autoView( U_v , U, CpuRead); | ||||||
|       auto Uconj_v = Uconj.View(); | 	autoView( Uconj_v , Uconj, CpuRead); | ||||||
|       auto Utmp_v= Utmp.View(); | 	autoView( Uds_v , Uds, CpuWrite); | ||||||
|       thread_foreach(ss,U_v,{ | 	autoView( Utmp_v, Utmp, CpuWrite); | ||||||
| 	Uds_v[ss](0)(mu) = U_v[ss](); | 	thread_foreach(ss,U_v,{ | ||||||
| 	Uds_v[ss](1)(mu) = Uconj_v[ss](); | 	    Uds_v[ss](0)(mu) = U_v[ss](); | ||||||
|       }); | 	    Uds_v[ss](1)(mu) = Uconj_v[ss](); | ||||||
|  | 	  }); | ||||||
|  |       } | ||||||
|            |            | ||||||
|       U     = adj(Cshift(U    ,mu,-1));      // correct except for spanning the boundary |       U     = adj(Cshift(U    ,mu,-1));      // correct except for spanning the boundary | ||||||
|       Uconj = adj(Cshift(Uconj,mu,-1)); |       Uconj = adj(Cshift(Uconj,mu,-1)); | ||||||
| @@ -238,19 +240,25 @@ public: | |||||||
| 	Utmp = where(coor==0,Uconj,Utmp); | 	Utmp = where(coor==0,Uconj,Utmp); | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       thread_foreach(ss,Utmp_v,{ |       { | ||||||
| 	Uds_v[ss](0)(mu+4) = Utmp_v[ss](); | 	autoView( Uds_v , Uds, CpuWrite); | ||||||
|       }); | 	autoView( Utmp_v, Utmp, CpuWrite); | ||||||
|            | 	thread_foreach(ss,Utmp_v,{ | ||||||
|  | 	    Uds_v[ss](0)(mu+4) = Utmp_v[ss](); | ||||||
|  | 	  }); | ||||||
|  |       } | ||||||
|       Utmp = Uconj; |       Utmp = Uconj; | ||||||
|       if ( Params.twists[mu] ) {  |       if ( Params.twists[mu] ) {  | ||||||
| 	Utmp = where(coor==0,U,Utmp); | 	Utmp = where(coor==0,U,Utmp); | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       thread_foreach(ss,Utmp_v,{ |       {	   | ||||||
|         Uds_v[ss](1)(mu+4) = Utmp_v[ss](); | 	autoView( Uds_v , Uds, CpuWrite); | ||||||
|       }); | 	autoView( Utmp_v, Utmp, CpuWrite); | ||||||
|            | 	thread_foreach(ss,Utmp_v,{ | ||||||
|  | 	    Uds_v[ss](1)(mu+4) = Utmp_v[ss](); | ||||||
|  |         }); | ||||||
|  |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|        |        | ||||||
| @@ -260,11 +268,14 @@ public: | |||||||
|     GaugeLinkField link(mat.Grid()); |     GaugeLinkField link(mat.Grid()); | ||||||
|     // use lorentz for flavour as hack. |     // use lorentz for flavour as hack. | ||||||
|     auto tmp = TraceIndex<SpinIndex>(outerProduct(Btilde, A)); |     auto tmp = TraceIndex<SpinIndex>(outerProduct(Btilde, A)); | ||||||
|     auto link_v = link.View(); |  | ||||||
|     auto tmp_v = tmp.View(); |     { | ||||||
|     thread_foreach(ss,tmp_v,{ |       autoView( link_v , link, CpuWrite); | ||||||
|       link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1)); |       autoView( tmp_v , tmp, CpuRead); | ||||||
|     }); |       thread_foreach(ss,tmp_v,{ | ||||||
|  | 	  link_v[ss]() = tmp_v[ss](0, 0) + conjugate(tmp_v[ss](1, 1)); | ||||||
|  | 	}); | ||||||
|  |     } | ||||||
|     PokeIndex<LorentzIndex>(mat, link, mu); |     PokeIndex<LorentzIndex>(mat, link, mu); | ||||||
|     return; |     return; | ||||||
|   } |   } | ||||||
| @@ -294,16 +305,18 @@ public: | |||||||
|          |          | ||||||
|     GaugeLinkField tmp(mat.Grid()); |     GaugeLinkField tmp(mat.Grid()); | ||||||
|     tmp = Zero(); |     tmp = Zero(); | ||||||
|     auto tmp_v = tmp.View(); |     { | ||||||
|     auto Atilde_v = Atilde.View(); |       autoView( tmp_v , tmp, CpuWrite); | ||||||
|     auto Btilde_v = Btilde.View(); |       autoView( Atilde_v , Atilde, CpuRead); | ||||||
|     thread_for(ss,tmp.Grid()->oSites(),{ |       autoView( Btilde_v , Btilde, CpuRead); | ||||||
|       for (int s = 0; s < Ls; s++) { |       thread_for(ss,tmp.Grid()->oSites(),{ | ||||||
| 	int sF = s + Ls * ss; | 	  for (int s = 0; s < Ls; s++) { | ||||||
| 	auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF])); | 	    int sF = s + Ls * ss; | ||||||
| 	tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1)); | 	    auto ttmp = traceIndex<SpinIndex>(outerProduct(Btilde_v[sF], Atilde_v[sF])); | ||||||
|       } | 	    tmp_v[ss]() = tmp_v[ss]() + ttmp(0, 0) + conjugate(ttmp(1, 1)); | ||||||
|     }); | 	  } | ||||||
|  | 	}); | ||||||
|  |     } | ||||||
|     PokeIndex<LorentzIndex>(mat, tmp, mu); |     PokeIndex<LorentzIndex>(mat, tmp, mu); | ||||||
|     return; |     return; | ||||||
|   } |   } | ||||||
| @@ -314,8 +327,8 @@ typedef GparityWilsonImpl<vComplex , FundamentalRepresentation,CoeffReal> Gparit | |||||||
| typedef GparityWilsonImpl<vComplexF, FundamentalRepresentation,CoeffReal> GparityWilsonImplF;  // Float | typedef GparityWilsonImpl<vComplexF, FundamentalRepresentation,CoeffReal> GparityWilsonImplF;  // Float | ||||||
| typedef GparityWilsonImpl<vComplexD, FundamentalRepresentation,CoeffReal> GparityWilsonImplD;  // Double | typedef GparityWilsonImpl<vComplexD, FundamentalRepresentation,CoeffReal> GparityWilsonImplD;  // Double | ||||||
|   |   | ||||||
| typedef GparityWilsonImpl<vComplex , FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplRL;  // Real.. whichever prec | //typedef GparityWilsonImpl<vComplex , FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplRL;  // Real.. whichever prec | ||||||
| typedef GparityWilsonImpl<vComplexF, FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplFH;  // Float | //typedef GparityWilsonImpl<vComplexF, FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplFH;  // Float | ||||||
| typedef GparityWilsonImpl<vComplexD, FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplDF;  // Double | //typedef GparityWilsonImpl<vComplexD, FundamentalRepresentation,CoeffRealHalfComms> GparityWilsonImplDF;  // Double | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|   | |||||||
| @@ -71,8 +71,8 @@ public: | |||||||
|   // override multiply; cut number routines if pass dagger argument |   // override multiply; cut number routines if pass dagger argument | ||||||
|   // and also make interface more uniformly consistent |   // and also make interface more uniformly consistent | ||||||
|   ////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////// | ||||||
|   RealD M(const FermionField &in, FermionField &out); |   void M(const FermionField &in, FermionField &out); | ||||||
|   RealD Mdag(const FermionField &in, FermionField &out); |   void Mdag(const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|   ///////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////// | ||||||
|   // half checkerboard operations |   // half checkerboard operations | ||||||
| @@ -185,10 +185,12 @@ public: | |||||||
|   void ContractConservedCurrent(PropagatorField &q_in_1, |   void ContractConservedCurrent(PropagatorField &q_in_1, | ||||||
|                                 PropagatorField &q_in_2, |                                 PropagatorField &q_in_2, | ||||||
|                                 PropagatorField &q_out, |                                 PropagatorField &q_out, | ||||||
|  |                                 PropagatorField &src, | ||||||
|                                 Current curr_type, |                                 Current curr_type, | ||||||
|                                 unsigned int mu); |                                 unsigned int mu); | ||||||
|   void SeqConservedCurrent(PropagatorField &q_in, |   void SeqConservedCurrent(PropagatorField &q_in, | ||||||
|                            PropagatorField &q_out, |                            PropagatorField &q_out, | ||||||
|  |                            PropagatorField &srct, | ||||||
|                            Current curr_type, |                            Current curr_type, | ||||||
|                            unsigned int mu,  |                            unsigned int mu,  | ||||||
|                            unsigned int tmin, |                            unsigned int tmin, | ||||||
|   | |||||||
| @@ -1,4 +1,3 @@ | |||||||
|  |  | ||||||
| /************************************************************************************* | /************************************************************************************* | ||||||
|  |  | ||||||
|     Grid physics library, www.github.com/paboyle/Grid  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
| @@ -62,8 +61,8 @@ public: | |||||||
|   double DhopCalls; |   double DhopCalls; | ||||||
|   double DhopCommTime; |   double DhopCommTime; | ||||||
|   double DhopComputeTime; |   double DhopComputeTime; | ||||||
|       double DhopComputeTime2; |   double DhopComputeTime2; | ||||||
|       double DhopFaceTime; |   double DhopFaceTime; | ||||||
|  |  | ||||||
|   /////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////// | ||||||
|   // Implement the abstract base |   // Implement the abstract base | ||||||
| @@ -74,8 +73,8 @@ public: | |||||||
|   GridBase *FermionRedBlackGrid(void)    { return _FiveDimRedBlackGrid;} |   GridBase *FermionRedBlackGrid(void)    { return _FiveDimRedBlackGrid;} | ||||||
|  |  | ||||||
|   // full checkerboard operations; leave unimplemented as abstract for now |   // full checkerboard operations; leave unimplemented as abstract for now | ||||||
|   RealD  M    (const FermionField &in, FermionField &out); |   void  M    (const FermionField &in, FermionField &out); | ||||||
|   RealD  Mdag (const FermionField &in, FermionField &out); |   void  Mdag (const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|   // half checkerboard operations |   // half checkerboard operations | ||||||
|   void   Meooe       (const FermionField &in, FermionField &out); |   void   Meooe       (const FermionField &in, FermionField &out); | ||||||
| @@ -209,7 +208,7 @@ public: | |||||||
|   LebesgueOrder LebesgueEvenOdd; |   LebesgueOrder LebesgueEvenOdd; | ||||||
|      |      | ||||||
|   // Comms buffer |   // Comms buffer | ||||||
|   std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf; |   //  std::vector<SiteHalfSpinor,alignedAllocator<SiteHalfSpinor> >  comm_buf; | ||||||
|      |      | ||||||
|   /////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////// | ||||||
|   // Conserved current utilities |   // Conserved current utilities | ||||||
| @@ -217,15 +216,17 @@ public: | |||||||
|   void ContractConservedCurrent(PropagatorField &q_in_1, |   void ContractConservedCurrent(PropagatorField &q_in_1, | ||||||
| 				PropagatorField &q_in_2, | 				PropagatorField &q_in_2, | ||||||
| 				PropagatorField &q_out, | 				PropagatorField &q_out, | ||||||
|  | 				PropagatorField &src, | ||||||
| 				Current curr_type, | 				Current curr_type, | ||||||
| 				unsigned int mu); | 				unsigned int mu); | ||||||
|   void SeqConservedCurrent(PropagatorField &q_in, |   void SeqConservedCurrent(PropagatorField &q_in, | ||||||
| 			   PropagatorField &q_out, | 			   PropagatorField &q_out, | ||||||
|  | 			   PropagatorField &src, | ||||||
| 			   Current curr_type, | 			   Current curr_type, | ||||||
| 			   unsigned int mu,  | 			   unsigned int mu,  | ||||||
| 			   unsigned int tmin, | 			   unsigned int tmin, | ||||||
|                              unsigned int tmax, | 			   unsigned int tmax, | ||||||
|                  	     ComplexField &lattice_cmplx); | 			   ComplexField &lattice_cmplx); | ||||||
| }; | }; | ||||||
|  |  | ||||||
| NAMESPACE_END(Grid); | NAMESPACE_END(Grid); | ||||||
|   | |||||||
| @@ -40,6 +40,11 @@ inline void convert(const Fieldi &from,Fieldo &to) | |||||||
|   to=from; |   to=from; | ||||||
| } | } | ||||||
|  |  | ||||||
|  | struct MADWFinnerIterCallbackBase{ | ||||||
|  |   virtual void operator()(const RealD current_resid){} | ||||||
|  |   virtual ~MADWFinnerIterCallbackBase(){} | ||||||
|  | }; | ||||||
|  |  | ||||||
| template<class Matrixo,class Matrixi,class PVinverter,class SchurSolver, class Guesser>  | template<class Matrixo,class Matrixi,class PVinverter,class SchurSolver, class Guesser>  | ||||||
| class MADWF  | class MADWF  | ||||||
| { | { | ||||||
| @@ -56,25 +61,31 @@ class MADWF | |||||||
|  |  | ||||||
|   RealD target_resid; |   RealD target_resid; | ||||||
|   int   maxiter; |   int   maxiter; | ||||||
|  public: |  | ||||||
|  |  | ||||||
|  |   //operator() is called on "callback" at the end of every inner iteration. This allows for example the adjustment of the inner | ||||||
|  |   //tolerance to speed up subsequent iteration | ||||||
|  |   MADWFinnerIterCallbackBase* callback; | ||||||
|  |    | ||||||
|  |  public: | ||||||
|   MADWF(Matrixo &_Mato, |   MADWF(Matrixo &_Mato, | ||||||
| 	Matrixi &_Mati, | 	Matrixi &_Mati, | ||||||
| 	PVinverter &_PauliVillarsSolvero, | 	PVinverter &_PauliVillarsSolvero, | ||||||
| 	SchurSolver &_SchurSolveri, | 	SchurSolver &_SchurSolveri, | ||||||
| 	Guesser & _Guesseri, | 	Guesser & _Guesseri, | ||||||
| 	RealD resid, | 	RealD resid, | ||||||
| 	int _maxiter) : | 	int _maxiter, | ||||||
|  | 	MADWFinnerIterCallbackBase* _callback = NULL) : | ||||||
|  |  | ||||||
|   Mato(_Mato),Mati(_Mati), |   Mato(_Mato),Mati(_Mati), | ||||||
|     SchurSolveri(_SchurSolveri), |     SchurSolveri(_SchurSolveri), | ||||||
|     PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri) |     PauliVillarsSolvero(_PauliVillarsSolvero),Guesseri(_Guesseri), | ||||||
|   {    |     callback(_callback) | ||||||
|     target_resid=resid; |     { | ||||||
|     maxiter     =_maxiter;  |       target_resid=resid; | ||||||
|   }; |       maxiter     =_maxiter; | ||||||
|  |     }; | ||||||
|     |     | ||||||
|   void operator() (const FermionFieldo &src4,FermionFieldo &sol5) |   void operator() (const FermionFieldo &src,FermionFieldo &sol5) | ||||||
|   { |   { | ||||||
|     std::cout << GridLogMessage<< " ************************************************" << std::endl; |     std::cout << GridLogMessage<< " ************************************************" << std::endl; | ||||||
|     std::cout << GridLogMessage<< "  MADWF-like algorithm                           " << std::endl; |     std::cout << GridLogMessage<< "  MADWF-like algorithm                           " << std::endl; | ||||||
| @@ -103,8 +114,16 @@ class MADWF | |||||||
|     /////////////////////////////////////// |     /////////////////////////////////////// | ||||||
|     //Import source, include Dminus factors |     //Import source, include Dminus factors | ||||||
|     /////////////////////////////////////// |     /////////////////////////////////////// | ||||||
|     Mato.ImportPhysicalFermionSource(src4,b);  |     GridBase *src_grid = src.Grid(); | ||||||
|     std::cout << GridLogMessage << " src4 " <<norm2(src4)<<std::endl; |  | ||||||
|  |     assert( (src_grid == Mato.GaugeGrid()) || (src_grid == Mato.FermionGrid())); | ||||||
|  |  | ||||||
|  |     if ( src_grid == Mato.GaugeGrid() ) { | ||||||
|  |       Mato.ImportPhysicalFermionSource(src,b); | ||||||
|  |     } else { | ||||||
|  |       b=src; | ||||||
|  |     } | ||||||
|  |     std::cout << GridLogMessage << " src " <<norm2(src)<<std::endl; | ||||||
|     std::cout << GridLogMessage << " b    " <<norm2(b)<<std::endl; |     std::cout << GridLogMessage << " b    " <<norm2(b)<<std::endl; | ||||||
|  |  | ||||||
|     defect = b; |     defect = b; | ||||||
| @@ -177,6 +196,8 @@ class MADWF | |||||||
|        std::cout << GridLogMessage << "Residual " << i << ": " << resid  << std::endl; |        std::cout << GridLogMessage << "Residual " << i << ": " << resid  << std::endl; | ||||||
|        std::cout << GridLogMessage << "***************************************" <<std::endl; |        std::cout << GridLogMessage << "***************************************" <<std::endl; | ||||||
|  |  | ||||||
|  |        if(callback != NULL) (*callback)(resid);        | ||||||
|  |         | ||||||
|        if (resid < target_resid) { |        if (resid < target_resid) { | ||||||
| 	 return; | 	 return; | ||||||
|        } |        } | ||||||
|   | |||||||
| @@ -56,8 +56,8 @@ public: | |||||||
|   virtual void  DtildeInv        (const FermionField& in, FermionField& out); |   virtual void  DtildeInv        (const FermionField& in, FermionField& out); | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD M                (const FermionField& in, FermionField& out); |   virtual void  M                (const FermionField& in, FermionField& out); | ||||||
|   virtual RealD Mdag             (const FermionField& in, FermionField& out); |   virtual void  Mdag             (const FermionField& in, FermionField& out); | ||||||
|  |  | ||||||
|   // half checkerboard operations |   // half checkerboard operations | ||||||
|   virtual void  Mooee            (const FermionField& in, FermionField& out); |   virtual void  Mooee            (const FermionField& in, FermionField& out); | ||||||
|   | |||||||
| @@ -59,7 +59,7 @@ public: | |||||||
|   { |   { | ||||||
|     RealD eps = 1.0; |     RealD eps = 1.0; | ||||||
|  |  | ||||||
|     std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl; |     //    std::cout<<GridLogMessage << "MobiusFermion (b="<<b<<",c="<<c<<") with Ls= "<<this->Ls<<" Tanh approx"<<std::endl; | ||||||
|     Approx::zolotarev_data *zdata = Approx::higham(eps,this->Ls);// eps is ignored for higham |     Approx::zolotarev_data *zdata = Approx::higham(eps,this->Ls);// eps is ignored for higham | ||||||
|     assert(zdata->n==this->Ls); |     assert(zdata->n==this->Ls); | ||||||
| 	 | 	 | ||||||
|   | |||||||
							
								
								
									
										194
									
								
								Grid/qcd/action/fermion/NaiveStaggeredFermion.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										194
									
								
								Grid/qcd/action/fermion/NaiveStaggeredFermion.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,194 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/qcd/action/fermion/ImprovedStaggered.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi, Peter Boyle | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | 			   /*  END LEGAL */ | ||||||
|  | #ifndef GRID_QCD_NAIVE_STAG_FERMION_H | ||||||
|  | #define GRID_QCD_NAIVE_STAG_FERMION_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | class NaiveStaggeredFermionStatic { | ||||||
|  | public: | ||||||
|  |   static const std::vector<int> directions; | ||||||
|  |   static const std::vector<int> displacements; | ||||||
|  |   static const int npoint = 8; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template <class Impl> | ||||||
|  | class NaiveStaggeredFermion : public StaggeredKernels<Impl>, public NaiveStaggeredFermionStatic { | ||||||
|  | public: | ||||||
|  |   INHERIT_IMPL_TYPES(Impl); | ||||||
|  |   typedef StaggeredKernels<Impl> Kernels; | ||||||
|  |  | ||||||
|  |   FermionField _tmp; | ||||||
|  |   FermionField &tmp(void) { return _tmp; } | ||||||
|  |  | ||||||
|  |   //////////////////////////////////////// | ||||||
|  |   // Performance monitoring | ||||||
|  |   //////////////////////////////////////// | ||||||
|  |   void Report(void); | ||||||
|  |   void ZeroCounters(void); | ||||||
|  |   double DhopTotalTime; | ||||||
|  |   double DhopCalls; | ||||||
|  |   double DhopCommTime; | ||||||
|  |   double DhopComputeTime; | ||||||
|  |   double DhopComputeTime2; | ||||||
|  |   double DhopFaceTime; | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Implement the abstract base | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   GridBase *GaugeGrid(void) { return _grid; } | ||||||
|  |   GridBase *GaugeRedBlackGrid(void) { return _cbgrid; } | ||||||
|  |   GridBase *FermionGrid(void) { return _grid; } | ||||||
|  |   GridBase *FermionRedBlackGrid(void) { return _cbgrid; } | ||||||
|  |  | ||||||
|  |   ////////////////////////////////////////////////////////////////// | ||||||
|  |   // override multiply; cut number routines if pass dagger argument | ||||||
|  |   // and also make interface more uniformly consistent | ||||||
|  |   ////////////////////////////////////////////////////////////////// | ||||||
|  |   void M(const FermionField &in, FermionField &out); | ||||||
|  |   void Mdag(const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////////// | ||||||
|  |   // half checkerboard operations | ||||||
|  |   ///////////////////////////////////////////////////////// | ||||||
|  |   void Meooe(const FermionField &in, FermionField &out); | ||||||
|  |   void MeooeDag(const FermionField &in, FermionField &out); | ||||||
|  |   void Mooee(const FermionField &in, FermionField &out); | ||||||
|  |   void MooeeDag(const FermionField &in, FermionField &out); | ||||||
|  |   void MooeeInv(const FermionField &in, FermionField &out); | ||||||
|  |   void MooeeInvDag(const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|  |   //////////////////////// | ||||||
|  |   // Derivative interface | ||||||
|  |   //////////////////////// | ||||||
|  |   // Interface calls an internal routine | ||||||
|  |   void DhopDeriv  (GaugeField &mat, const FermionField &U, const FermionField &V, int dag); | ||||||
|  |   void DhopDerivOE(GaugeField &mat, const FermionField &U, const FermionField &V, int dag); | ||||||
|  |   void DhopDerivEO(GaugeField &mat, const FermionField &U, const FermionField &V, int dag); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // non-hermitian hopping term; half cb or both | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   void Dhop  (const FermionField &in, FermionField &out, int dag); | ||||||
|  |   void DhopOE(const FermionField &in, FermionField &out, int dag); | ||||||
|  |   void DhopEO(const FermionField &in, FermionField &out, int dag); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Multigrid assistance; force term uses too | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   void Mdir(const FermionField &in, FermionField &out, int dir, int disp); | ||||||
|  |   void MdirAll(const FermionField &in, std::vector<FermionField> &out); | ||||||
|  |   void DhopDir(const FermionField &in, FermionField &out, int dir, int disp); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Extra methods added by derived | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   void DerivInternal(StencilImpl &st,  | ||||||
|  | 		     DoubledGaugeField &U, | ||||||
|  | 		     GaugeField &mat,  | ||||||
|  | 		     const FermionField &A, const FermionField &B, int dag); | ||||||
|  |  | ||||||
|  |   void DhopInternal(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U, | ||||||
|  |                     const FermionField &in, FermionField &out, int dag); | ||||||
|  |   void DhopInternalSerialComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U, | ||||||
|  | 			       const FermionField &in, FermionField &out, int dag); | ||||||
|  |   void DhopInternalOverlappedComms(StencilImpl &st, LebesgueOrder &lo, DoubledGaugeField &U, | ||||||
|  | 				   const FermionField &in, FermionField &out, int dag); | ||||||
|  |  | ||||||
|  |   ////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Grid own interface Constructor | ||||||
|  |   ////////////////////////////////////////////////////////////////////////// | ||||||
|  |   NaiveStaggeredFermion(GaugeField &_U, GridCartesian &Fgrid, | ||||||
|  | 			GridRedBlackCartesian &Hgrid, RealD _mass, | ||||||
|  | 			RealD _c1, RealD _u0, | ||||||
|  | 			const ImplParams &p = ImplParams()); | ||||||
|  |   NaiveStaggeredFermion(GridCartesian &Fgrid, | ||||||
|  | 			GridRedBlackCartesian &Hgrid, RealD _mass, | ||||||
|  | 			RealD _c1, RealD _u0, | ||||||
|  | 			const ImplParams &p = ImplParams()); | ||||||
|  |  | ||||||
|  |   // DoubleStore impl dependent | ||||||
|  |   void ImportGauge      (const GaugeField &_U ); | ||||||
|  |   DoubledGaugeField &GetU(void)   { return Umu ; } ; | ||||||
|  |   void CopyGaugeCheckerboards(void); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Data members require to support the functionality | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  |   //    protected: | ||||||
|  | public: | ||||||
|  |   // any other parameters of action ??? | ||||||
|  |   virtual int   isTrivialEE(void) { return 1; }; | ||||||
|  |   virtual RealD Mass(void) { return mass; } | ||||||
|  |   RealD mass; | ||||||
|  |   RealD u0; | ||||||
|  |   RealD c1; | ||||||
|  |  | ||||||
|  |   GridBase *_grid; | ||||||
|  |   GridBase *_cbgrid; | ||||||
|  |  | ||||||
|  |   // Defines the stencils for even and odd | ||||||
|  |   StencilImpl Stencil; | ||||||
|  |   StencilImpl StencilEven; | ||||||
|  |   StencilImpl StencilOdd; | ||||||
|  |  | ||||||
|  |   // Copy of the gauge field , with even and odd subsets | ||||||
|  |   DoubledGaugeField Umu; | ||||||
|  |   DoubledGaugeField UmuEven; | ||||||
|  |   DoubledGaugeField UmuOdd; | ||||||
|  |  | ||||||
|  |   LebesgueOrder Lebesgue; | ||||||
|  |   LebesgueOrder LebesgueEvenOdd; | ||||||
|  |    | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   // Conserved current utilities | ||||||
|  |   /////////////////////////////////////////////////////////////// | ||||||
|  |   void ContractConservedCurrent(PropagatorField &q_in_1, | ||||||
|  |                                 PropagatorField &q_in_2, | ||||||
|  |                                 PropagatorField &q_out, | ||||||
|  |                                 PropagatorField &src, | ||||||
|  |                                 Current curr_type, | ||||||
|  |                                 unsigned int mu); | ||||||
|  |   void SeqConservedCurrent(PropagatorField &q_in, | ||||||
|  |                            PropagatorField &q_out, | ||||||
|  |                            PropagatorField &srct, | ||||||
|  |                            Current curr_type, | ||||||
|  |                            unsigned int mu,  | ||||||
|  |                            unsigned int tmin, | ||||||
|  |                            unsigned int tmax, | ||||||
|  | 			   ComplexField &lattice_cmplx); | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | typedef NaiveStaggeredFermion<StaggeredImplF> NaiveStaggeredFermionF; | ||||||
|  | typedef NaiveStaggeredFermion<StaggeredImplD> NaiveStaggeredFermionD; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -47,8 +47,8 @@ public: | |||||||
|   void   M_internal(const FermionField &in, FermionField &out,int dag); |   void   M_internal(const FermionField &in, FermionField &out,int dag); | ||||||
|  |  | ||||||
|   // override multiply |   // override multiply | ||||||
|   virtual RealD  M    (const FermionField &in, FermionField &out); |   virtual void   M    (const FermionField &in, FermionField &out); | ||||||
|   virtual RealD  Mdag (const FermionField &in, FermionField &out); |   virtual void   Mdag (const FermionField &in, FermionField &out); | ||||||
|  |  | ||||||
|   // half checkerboard operaions |   // half checkerboard operaions | ||||||
|   virtual void   Meooe       (const FermionField &in, FermionField &out); |   virtual void   Meooe       (const FermionField &in, FermionField &out); | ||||||
|   | |||||||
| @@ -72,19 +72,23 @@ public: | |||||||
|      |      | ||||||
|   StaggeredImpl(const ImplParams &p = ImplParams()) : Params(p){}; |   StaggeredImpl(const ImplParams &p = ImplParams()) : Params(p){}; | ||||||
|        |        | ||||||
|   static accelerator_inline void multLink(SiteSpinor &phi, |   template<class _Spinor> | ||||||
|  |   static accelerator_inline void multLink(_Spinor &phi, | ||||||
| 		       const SiteDoubledGaugeField &U, | 		       const SiteDoubledGaugeField &U, | ||||||
| 		       const SiteSpinor &chi, | 		       const _Spinor &chi, | ||||||
| 		       int mu) | 		       int mu) | ||||||
|   { |   { | ||||||
|     mult(&phi(), &U(mu), &chi()); |     auto UU = coalescedRead(U(mu)); | ||||||
|  |     mult(&phi(), &UU, &chi()); | ||||||
|   } |   } | ||||||
|   static accelerator_inline void multLinkAdd(SiteSpinor &phi, |   template<class _Spinor> | ||||||
|  |   static accelerator_inline void multLinkAdd(_Spinor &phi, | ||||||
| 			  const SiteDoubledGaugeField &U, | 			  const SiteDoubledGaugeField &U, | ||||||
| 			  const SiteSpinor &chi, | 			  const _Spinor &chi, | ||||||
| 			  int mu) | 			  int mu) | ||||||
|   { |   { | ||||||
|     mac(&phi(), &U(mu), &chi()); |     auto UU = coalescedRead(U(mu)); | ||||||
|  |     mac(&phi(), &UU, &chi()); | ||||||
|   } |   } | ||||||
|        |        | ||||||
|   template <class ref> |   template <class ref> | ||||||
|   | |||||||
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