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			1437 Commits
		
	
	
		
			feature/hd
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|  | 4180a4a8a7 | 
							
								
								
									
										54
									
								
								.github/ISSUE_TEMPLATE/bug-report.yml
									
									
									
									
										vendored
									
									
										Normal file
									
								
							
							
						
						
									
										54
									
								
								.github/ISSUE_TEMPLATE/bug-report.yml
									
									
									
									
										vendored
									
									
										Normal file
									
								
							| @@ -0,0 +1,54 @@ | ||||
| name: Bug report | ||||
| description: Report a bug. | ||||
| title: "<insert title>" | ||||
| labels: [bug] | ||||
|  | ||||
| body: | ||||
|   - type: markdown | ||||
|     attributes: | ||||
|       value: > | ||||
|         Thank you for taking the time to file a bug report. | ||||
|         Please check that the code is pointing to the HEAD of develop | ||||
|         or any commit in master which is tagged with a version number. | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Describe the issue:" | ||||
|       description: > | ||||
|         Describe the issue and any previous attempt to solve it. | ||||
|     validations: | ||||
|       required: true | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Code example:" | ||||
|       description: > | ||||
|         If relevant, show how to reproduce the issue using a minimal working | ||||
|         example. | ||||
|       placeholder: | | ||||
|         << your code here >> | ||||
|       render: shell | ||||
|     validations: | ||||
|       required: false | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Target platform:" | ||||
|       description: > | ||||
|         Give a description of the target platform (CPU, network, compiler). | ||||
|         Please give the full CPU part description, using for example | ||||
|         `cat /proc/cpuinfo | grep 'model name' | uniq` (Linux) | ||||
|         or `sysctl machdep.cpu.brand_string` (macOS) and the full output | ||||
|         the `--version` option of your compiler. | ||||
|     validations: | ||||
|       required: true | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Configure options:" | ||||
|       description: > | ||||
|         Please give the exact configure command used and attach | ||||
|         `config.log`, `grid.config.summary` and the output of `make V=1`. | ||||
|       render: shell | ||||
|     validations: | ||||
|       required: true | ||||
							
								
								
									
										1
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							
							
						
						
									
										1
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							| @@ -88,6 +88,7 @@ Thumbs.db | ||||
| # build directory # | ||||
| ################### | ||||
| build*/* | ||||
| Documentation/_build | ||||
|  | ||||
| # IDE related files # | ||||
| ##################### | ||||
|   | ||||
							
								
								
									
										61
									
								
								.travis.yml
									
									
									
									
									
								
							
							
						
						
									
										61
									
								
								.travis.yml
									
									
									
									
									
								
							| @@ -1,61 +0,0 @@ | ||||
| language: cpp | ||||
|  | ||||
| cache: | ||||
|   directories: | ||||
|     - clang | ||||
|  | ||||
| matrix: | ||||
|   include: | ||||
|     - os:        osx | ||||
|       osx_image: xcode8.3 | ||||
|       compiler: clang | ||||
|       env: PREC=single | ||||
|     - os:        osx | ||||
|       osx_image: xcode8.3 | ||||
|       compiler: clang | ||||
|       env: PREC=double | ||||
|        | ||||
| before_install: | ||||
|     - export GRIDDIR=`pwd` | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]] && [ ! -e clang/bin ]; then wget $CLANG_LINK; tar -xf `basename $CLANG_LINK`; mkdir clang; mv clang+*/* clang/; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export PATH="${GRIDDIR}/clang/bin:${PATH}"; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export LD_LIBRARY_PATH="${GRIDDIR}/clang/lib:${LD_LIBRARY_PATH}"; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew update; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc openssl; fi | ||||
|      | ||||
| install: | ||||
|     - export CWD=`pwd` | ||||
|     - echo $CWD | ||||
|     - export CC=$CC$VERSION | ||||
|     - export CXX=$CXX$VERSION | ||||
|     - echo $PATH | ||||
|     - which autoconf | ||||
|     - autoconf  --version | ||||
|     - which automake | ||||
|     - automake  --version | ||||
|     - which $CC | ||||
|     - $CC  --version | ||||
|     - which $CXX | ||||
|     - $CXX --version | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export LDFLAGS='-L/usr/local/lib'; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export EXTRACONF='--with-openssl=/usr/local/opt/openssl'; fi | ||||
|      | ||||
| script: | ||||
|     - ./bootstrap.sh | ||||
|     - mkdir build | ||||
|     - cd build | ||||
|     - mkdir lime | ||||
|     - cd lime | ||||
|     - mkdir build | ||||
|     - cd build | ||||
|     - wget http://usqcd-software.github.io/downloads/c-lime/lime-1.3.2.tar.gz | ||||
|     - tar xf lime-1.3.2.tar.gz | ||||
|     - cd lime-1.3.2 | ||||
|     - ./configure --prefix=$CWD/build/lime/install | ||||
|     - make -j4 | ||||
|     - make install | ||||
|     - cd $CWD/build | ||||
|     - ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF} | ||||
|     - make -j4  | ||||
|     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals | ||||
|     - make check | ||||
| @@ -37,19 +37,29 @@ directory | ||||
| #endif | ||||
|  | ||||
|  //disables and intel compiler specific warning (in json.hpp) | ||||
| #ifdef __ICC | ||||
| #pragma warning disable 488   | ||||
| #endif | ||||
|  | ||||
| #ifdef __NVCC__ | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma clang diagnostic ignored "-Wdeprecated-register" | ||||
|  | ||||
| #ifdef __NVCC_DIAG_PRAGMA_SUPPORT__ | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma nv_diag_suppress unsigned_compare_with_zero | ||||
| #pragma nv_diag_suppress cast_to_qualified_type | ||||
|  //disables nvcc specific warning in many files | ||||
| #pragma nv_diag_suppress esa_on_defaulted_function_ignored | ||||
| #pragma nv_diag_suppress extra_semicolon | ||||
| #else | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma diag_suppress unsigned_compare_with_zero | ||||
| #pragma diag_suppress cast_to_qualified_type | ||||
|  | ||||
|  //disables nvcc specific warning in many files | ||||
| #pragma diag_suppress esa_on_defaulted_function_ignored | ||||
| #pragma diag_suppress extra_semicolon | ||||
|  | ||||
| //Eigen only | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| // Disable vectorisation in Eigen on the Power8/9 and PowerPC | ||||
|   | ||||
| @@ -44,12 +44,13 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/GridStd.h> | ||||
| #include <Grid/threads/Pragmas.h> | ||||
| #include <Grid/perfmon/Timer.h> | ||||
| #include <Grid/perfmon/PerfCount.h> | ||||
| //#include <Grid/perfmon/PerfCount.h> | ||||
| #include <Grid/util/Util.h> | ||||
| #include <Grid/log/Log.h> | ||||
| #include <Grid/allocator/AlignedAllocator.h> | ||||
| #include <Grid/perfmon/Tracing.h> | ||||
| #include <Grid/allocator/Allocator.h> | ||||
| #include <Grid/simd/Simd.h> | ||||
| #include <Grid/threads/Threads.h> | ||||
| #include <Grid/threads/ThreadReduction.h> | ||||
| #include <Grid/serialisation/Serialisation.h> | ||||
| #include <Grid/util/Sha.h> | ||||
| #include <Grid/communicator/Communicator.h>  | ||||
|   | ||||
| @@ -36,6 +36,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/GridCore.h> | ||||
| #include <Grid/qcd/QCD.h> | ||||
| #include <Grid/qcd/spin/Spin.h> | ||||
| #include <Grid/qcd/gparity/Gparity.h> | ||||
| #include <Grid/qcd/utils/Utils.h> | ||||
| #include <Grid/qcd/representations/Representations.h> | ||||
| NAMESPACE_CHECK(GridQCDCore); | ||||
|   | ||||
| @@ -6,6 +6,7 @@ | ||||
| /////////////////// | ||||
| #include <cassert> | ||||
| #include <complex> | ||||
| #include <memory> | ||||
| #include <vector> | ||||
| #include <array> | ||||
| #include <string> | ||||
| @@ -15,6 +16,7 @@ | ||||
| #include <functional> | ||||
| #include <stdio.h> | ||||
| #include <stdlib.h> | ||||
| #include <strings.h> | ||||
| #include <stdio.h> | ||||
| #include <signal.h> | ||||
| #include <ctime> | ||||
| @@ -27,4 +29,7 @@ | ||||
| /////////////////// | ||||
| #include "Config.h" | ||||
|  | ||||
| #ifdef TOFU | ||||
| #undef GRID_COMMS_THREADS | ||||
| #endif | ||||
| #endif /* GRID_STD_H */ | ||||
|   | ||||
| @@ -14,16 +14,37 @@ | ||||
| /* NVCC save and restore compile environment*/ | ||||
| #ifdef __NVCC__ | ||||
| #pragma push | ||||
| #ifdef __NVCC_DIAG_PRAGMA_SUPPORT__ | ||||
| #pragma nv_diag_suppress code_is_unreachable | ||||
| #else | ||||
| #pragma diag_suppress code_is_unreachable | ||||
| #endif | ||||
| #pragma push_macro("__CUDA_ARCH__") | ||||
| #pragma push_macro("__NVCC__") | ||||
| #pragma push_macro("__CUDACC__") | ||||
| #undef __CUDA_ARCH__ | ||||
| #undef __NVCC__ | ||||
| #undef __CUDACC__ | ||||
| #undef __CUDA_ARCH__ | ||||
| #define __NVCC__REDEFINE__ | ||||
| #endif  | ||||
|  | ||||
| /* SYCL save and restore compile environment*/ | ||||
| #ifdef GRID_SYCL | ||||
| #pragma push | ||||
| #pragma push_macro("__SYCL_DEVICE_ONLY__") | ||||
| #undef __SYCL_DEVICE_ONLY__ | ||||
| #define EIGEN_DONT_VECTORIZE | ||||
| //#undef EIGEN_USE_SYCL | ||||
| #define __SYCL__REDEFINE__ | ||||
| #endif | ||||
|  | ||||
| /* HIP save and restore compile environment*/ | ||||
| #ifdef GRID_HIP | ||||
| #pragma push | ||||
| #pragma push_macro("__HIP_DEVICE_COMPILE__") | ||||
| #endif | ||||
| #define EIGEN_NO_HIP | ||||
|  | ||||
| #include <Grid/Eigen/Dense> | ||||
| #include <Grid/Eigen/unsupported/CXX11/Tensor> | ||||
|  | ||||
| @@ -35,7 +56,20 @@ | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| /*SYCL restore*/ | ||||
| #ifdef __SYCL__REDEFINE__ | ||||
| #pragma pop_macro("__SYCL_DEVICE_ONLY__") | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| /*HIP restore*/ | ||||
| #ifdef __HIP__REDEFINE__ | ||||
| #pragma pop_macro("__HIP_DEVICE_COMPILE__") | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| #if defined __GNUC__ | ||||
| #pragma GCC diagnostic pop | ||||
| #endif | ||||
|  | ||||
|  | ||||
|   | ||||
| @@ -21,7 +21,8 @@ if BUILD_HDF5 | ||||
|   extra_headers+=serialisation/Hdf5Type.h | ||||
| endif | ||||
|  | ||||
| all: version-cache | ||||
|  | ||||
| all: version-cache Version.h | ||||
|  | ||||
| version-cache: | ||||
| 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | ||||
| @@ -42,7 +43,7 @@ version-cache: | ||||
| 	fi;\ | ||||
| 	rm -f vertmp | ||||
|  | ||||
| Version.h: | ||||
| Version.h: version-cache | ||||
| 	cp version-cache Version.h | ||||
|  | ||||
| .PHONY: version-cache | ||||
| @@ -53,6 +54,19 @@ Version.h: | ||||
| include Make.inc | ||||
| include Eigen.inc | ||||
|  | ||||
| extra_sources+=$(WILS_FERMION_FILES) | ||||
| extra_sources+=$(STAG_FERMION_FILES) | ||||
| if BUILD_ZMOBIUS | ||||
|   extra_sources+=$(ZWILS_FERMION_FILES) | ||||
| endif | ||||
| if BUILD_GPARITY | ||||
|   extra_sources+=$(GP_FERMION_FILES) | ||||
| endif | ||||
| if BUILD_FERMION_REPS | ||||
|   extra_sources+=$(ADJ_FERMION_FILES) | ||||
|   extra_sources+=$(TWOIND_FERMION_FILES) | ||||
| endif | ||||
|  | ||||
| lib_LIBRARIES = libGrid.a | ||||
|  | ||||
| CCFILES += $(extra_sources) | ||||
|   | ||||
| @@ -29,9 +29,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #ifndef GRID_ALGORITHMS_H | ||||
| #define GRID_ALGORITHMS_H | ||||
|  | ||||
| NAMESPACE_CHECK(algorithms); | ||||
| #include <Grid/algorithms/SparseMatrix.h> | ||||
| #include <Grid/algorithms/LinearOperator.h> | ||||
| #include <Grid/algorithms/Preconditioner.h> | ||||
| NAMESPACE_CHECK(SparseMatrix); | ||||
|  | ||||
| #include <Grid/algorithms/approx/Zolotarev.h> | ||||
| #include <Grid/algorithms/approx/Chebyshev.h> | ||||
| @@ -39,14 +41,22 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/algorithms/approx/Remez.h> | ||||
| #include <Grid/algorithms/approx/MultiShiftFunction.h> | ||||
| #include <Grid/algorithms/approx/Forecast.h> | ||||
|  | ||||
| #include <Grid/algorithms/approx/RemezGeneral.h> | ||||
| #include <Grid/algorithms/approx/ZMobius.h> | ||||
| NAMESPACE_CHECK(approx); | ||||
| #include <Grid/algorithms/iterative/Deflation.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradient.h> | ||||
| NAMESPACE_CHECK(ConjGrad); | ||||
| #include <Grid/algorithms/iterative/BiCGSTAB.h> | ||||
| NAMESPACE_CHECK(BiCGSTAB); | ||||
| #include <Grid/algorithms/iterative/ConjugateResidual.h> | ||||
| #include <Grid/algorithms/iterative/NormalEquations.h> | ||||
| #include <Grid/algorithms/iterative/SchurRedBlack.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h> | ||||
| #include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h> | ||||
| #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | ||||
| #include <Grid/algorithms/iterative/MinimalResidual.h> | ||||
| @@ -58,7 +68,9 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | ||||
| #include <Grid/algorithms/iterative/PowerMethod.h> | ||||
|  | ||||
| NAMESPACE_CHECK(PowerMethod); | ||||
| #include <Grid/algorithms/CoarsenedMatrix.h> | ||||
| NAMESPACE_CHECK(CoarsendMatrix); | ||||
| #include <Grid/algorithms/FFT.h> | ||||
|  | ||||
| #endif | ||||
|   | ||||
										
											
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							| @@ -1,4 +1,3 @@ | ||||
|  | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| @@ -37,7 +36,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class scalar> struct FFTW { }; | ||||
| @@ -138,7 +136,7 @@ public: | ||||
|     flops=0; | ||||
|     usec =0; | ||||
|     Coordinate layout(Nd,1); | ||||
|     sgrid = new GridCartesian(dimensions,layout,processors); | ||||
|     sgrid = new GridCartesian(dimensions,layout,processors,*grid); | ||||
|   }; | ||||
|      | ||||
|   ~FFT ( void)  { | ||||
| @@ -184,14 +182,14 @@ public: | ||||
|     pencil_gd[dim] = G*processors[dim]; | ||||
|        | ||||
|     // Pencil global vol LxLxGxLxL per node | ||||
|     GridCartesian pencil_g(pencil_gd,layout,processors); | ||||
|     GridCartesian pencil_g(pencil_gd,layout,processors,*vgrid); | ||||
|        | ||||
|     // Construct pencils | ||||
|     typedef typename vobj::scalar_object sobj; | ||||
|     typedef typename sobj::scalar_type   scalar; | ||||
|        | ||||
|     Lattice<sobj> pgbuf(&pencil_g); | ||||
|     auto pgbuf_v = pgbuf.View(); | ||||
|     autoView(pgbuf_v , pgbuf, CpuWrite); | ||||
|  | ||||
|     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; | ||||
|     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; | ||||
| @@ -232,15 +230,18 @@ public: | ||||
|     result = source; | ||||
|     int pc = processor_coor[dim]; | ||||
|     for(int p=0;p<processors[dim];p++) { | ||||
|       { | ||||
| 	autoView(r_v,result,CpuRead); | ||||
| 	autoView(p_v,pgbuf,CpuWrite); | ||||
| 	thread_for(idx, sgrid->lSites(),{ | ||||
|           Coordinate cbuf(Nd); | ||||
|           sobj s; | ||||
| 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | ||||
| 	  peekLocalSite(s,result,cbuf); | ||||
| 	  peekLocalSite(s,r_v,cbuf); | ||||
| 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | ||||
| 	  //            cbuf[dim]+=p*L; | ||||
| 	  pokeLocalSite(s,pgbuf,cbuf); | ||||
| 	  pokeLocalSite(s,p_v,cbuf); | ||||
|         }); | ||||
|       } | ||||
|       if (p != processors[dim] - 1) { | ||||
| 	result = Cshift(result,dim,L); | ||||
|       } | ||||
| @@ -269,15 +270,19 @@ public: | ||||
|     flops+= flops_call*NN; | ||||
|        | ||||
|     // writing out result | ||||
|     { | ||||
|       autoView(pgbuf_v,pgbuf,CpuRead); | ||||
|       autoView(result_v,result,CpuWrite); | ||||
|       thread_for(idx,sgrid->lSites(),{ | ||||
| 	Coordinate clbuf(Nd), cgbuf(Nd); | ||||
| 	sobj s; | ||||
| 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | ||||
| 	cgbuf = clbuf; | ||||
| 	cgbuf[dim] = clbuf[dim]+L*pc; | ||||
| 	peekLocalSite(s,pgbuf,cgbuf); | ||||
| 	pokeLocalSite(s,result,clbuf); | ||||
| 	peekLocalSite(s,pgbuf_v,cgbuf); | ||||
| 	pokeLocalSite(s,result_v,clbuf); | ||||
|       }); | ||||
|     } | ||||
|     result = result*div; | ||||
|        | ||||
|     // destroying plan | ||||
|   | ||||
| @@ -43,7 +43,6 @@ NAMESPACE_BEGIN(Grid); | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> class LinearOperatorBase { | ||||
| public: | ||||
|  | ||||
|   // Support for coarsening to a multigrid | ||||
|   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base | ||||
|   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base | ||||
| @@ -53,6 +52,7 @@ public: | ||||
|   virtual void AdjOp  (const Field &in, Field &out) = 0; // Abstract base | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2)=0; | ||||
|   virtual void HermOp(const Field &in, Field &out)=0; | ||||
|   virtual ~LinearOperatorBase(){}; | ||||
| }; | ||||
|  | ||||
|  | ||||
| @@ -94,7 +94,10 @@ public: | ||||
|     _Mat.Mdag(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     _Mat.MdagM(in,out,n1,n2); | ||||
|     _Mat.MdagM(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.MdagM(in,out); | ||||
| @@ -131,17 +134,14 @@ public: | ||||
|     assert(0); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     _Mat.MdagM(in,out,n1,n2); | ||||
|     out = out + _shift*in; | ||||
|  | ||||
|     ComplexD dot;	 | ||||
|     dot= innerProduct(in,out); | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     RealD n1,n2; | ||||
|     HermOpAndNorm(in,out,n1,n2); | ||||
|     _Mat.MdagM(in,out); | ||||
|     out = out + _shift*in; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| @@ -170,7 +170,7 @@ public: | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     _Mat.M(in,out); | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot= innerProduct(in,out); n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
| @@ -208,29 +208,32 @@ public: | ||||
|   } | ||||
| }; | ||||
|  | ||||
|     ////////////////////////////////////////////////////////// | ||||
|     // Even Odd Schur decomp operators; there are several | ||||
|     // ways to introduce the even odd checkerboarding | ||||
|     ////////////////////////////////////////////////////////// | ||||
| ////////////////////////////////////////////////////////// | ||||
| // Even Odd Schur decomp operators; there are several | ||||
| // ways to introduce the even odd checkerboarding | ||||
| ////////////////////////////////////////////////////////// | ||||
|  | ||||
|     template<class Field> | ||||
|     class SchurOperatorBase :  public LinearOperatorBase<Field> { | ||||
| template<class Field> | ||||
| class SchurOperatorBase :  public LinearOperatorBase<Field> { | ||||
|  public: | ||||
|       virtual  RealD Mpc      (const Field &in, Field &out) =0; | ||||
|       virtual  RealD MpcDag   (const Field &in, Field &out) =0; | ||||
|       virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { | ||||
|   virtual  void Mpc      (const Field &in, Field &out) =0; | ||||
|   virtual  void MpcDag   (const Field &in, Field &out) =0; | ||||
|   virtual  void MpcDagMpc(const Field &in, Field &out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = in.Checkerboard(); | ||||
| 	ni=Mpc(in,tmp); | ||||
| 	no=MpcDag(tmp,out); | ||||
|     Mpc(in,tmp); | ||||
|     MpcDag(tmp,out); | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
| 	MpcDagMpc(in,out,n1,n2); | ||||
|     MpcDagMpc(in,out); | ||||
|     ComplexD dot= innerProduct(in,out);  | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   virtual void HermOp(const Field &in, Field &out){ | ||||
| 	RealD n1,n2; | ||||
| 	HermOpAndNorm(in,out,n1,n2); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|     MpcDagMpc(in,out); | ||||
|   } | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     Mpc(in,out); | ||||
| @@ -248,72 +251,66 @@ public: | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     assert(0); | ||||
|   }; | ||||
|     }; | ||||
|     template<class Matrix,class Field> | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { | ||||
|  public: | ||||
|     Matrix &_Mat; | ||||
|     SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { | ||||
|     virtual  void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|       tmp.Checkerboard() = !in.Checkerboard(); | ||||
| 	//std::cout <<"grid pointers: in._grid="<< in._grid << " out._grid=" << out._grid << "  _Mat.Grid=" << _Mat.Grid() << " _Mat.RedBlackGrid=" << _Mat.RedBlackGrid() << std::endl; | ||||
|        | ||||
|       _Mat.Meooe(in,tmp); | ||||
|       _Mat.MooeeInv(tmp,out); | ||||
|       _Mat.Meooe(out,tmp); | ||||
|  | ||||
|       //std::cout << "cb in " << in.Checkerboard() << "  cb out " << out.Checkerboard() << std::endl; | ||||
|       _Mat.Mooee(in,out); | ||||
| 	return axpy_norm(out,-1.0,tmp,out); | ||||
|       axpy(out,-1.0,tmp,out); | ||||
|     } | ||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ | ||||
|     virtual void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
| 	 | ||||
|       _Mat.MeooeDag(in,tmp); | ||||
|       _Mat.MooeeInvDag(tmp,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|  | ||||
|       _Mat.MooeeDag(in,out); | ||||
| 	return axpy_norm(out,-1.0,tmp,out); | ||||
|       axpy(out,-1.0,tmp,out); | ||||
|     } | ||||
|     }; | ||||
|     template<class Matrix,class Field> | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagOneOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|     Matrix &_Mat; | ||||
|  public: | ||||
|     SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|      | ||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { | ||||
|     virtual void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|  | ||||
|       _Mat.Meooe(in,out); | ||||
|       _Mat.MooeeInv(out,tmp); | ||||
|       _Mat.Meooe(tmp,out); | ||||
|       _Mat.MooeeInv(out,tmp); | ||||
|  | ||||
| 	return axpy_norm(out,-1.0,tmp,in); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ | ||||
|     virtual void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
|        | ||||
|       _Mat.MooeeInvDag(in,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|       _Mat.MooeeInvDag(tmp,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|  | ||||
| 	return axpy_norm(out,-1.0,tmp,in); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
|     }; | ||||
|     template<class Matrix,class Field> | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagTwoOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|     Matrix &_Mat; | ||||
|  public: | ||||
|     SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|      | ||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { | ||||
|     virtual void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|        | ||||
|       _Mat.MooeeInv(in,out); | ||||
| @@ -321,9 +318,9 @@ public: | ||||
|       _Mat.MooeeInv(tmp,out); | ||||
|       _Mat.Meooe(out,tmp); | ||||
|        | ||||
| 	return axpy_norm(out,-1.0,tmp,in); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ | ||||
|     virtual  void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
|  | ||||
|       _Mat.MeooeDag(in,out); | ||||
| @@ -331,97 +328,192 @@ public: | ||||
|       _Mat.MeooeDag(tmp,out); | ||||
|       _Mat.MooeeInvDag(out,tmp); | ||||
|  | ||||
| 	return axpy_norm(out,-1.0,tmp,in); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
| }; | ||||
|  | ||||
| template<class Field> | ||||
| class NonHermitianSchurOperatorBase :  public LinearOperatorBase<Field>  | ||||
| { | ||||
|  public: | ||||
|   virtual void  Mpc      (const Field& in, Field& out) = 0; | ||||
|   virtual void  MpcDag   (const Field& in, Field& out) = 0; | ||||
|   virtual void  MpcDagMpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = in.Checkerboard(); | ||||
|     Mpc(in,tmp); | ||||
|     MpcDag(tmp,out); | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) { | ||||
|     assert(0); | ||||
|   } | ||||
|   virtual void HermOp(const Field& in, Field& out) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void Op(const Field& in, Field& out) { | ||||
|     Mpc(in, out); | ||||
|   } | ||||
|   void AdjOp(const Field& in, Field& out) {  | ||||
|     MpcDag(in, out); | ||||
|   } | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag(const Field& in, Field& out) { | ||||
|     assert(0); // must coarsen the unpreconditioned system | ||||
|   } | ||||
|   void OpDir(const Field& in, Field& out, int dir, int disp) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDirAll(const Field& in, std::vector<Field>& out){ | ||||
|     assert(0); | ||||
|   }; | ||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | ||||
|     // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi | ||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | ||||
|     template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | ||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     //  Staggered use | ||||
|     /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     template<class Matrix,class Field> | ||||
|       class SchurStaggeredOperator :  public SchurOperatorBase<Field> { | ||||
| }; | ||||
|  | ||||
| template<class Matrix, class Field> | ||||
| class NonHermitianSchurDiagMooeeOperator :  public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  public: | ||||
|   Matrix& _Mat; | ||||
|  NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){}; | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = !in.Checkerboard(); | ||||
|      | ||||
|     _Mat.Meooe(in, tmp); | ||||
|     _Mat.MooeeInv(tmp, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|      | ||||
|     _Mat.Mooee(in, out); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, out); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MeooeDag(in, tmp); | ||||
|     _Mat.MooeeInvDag(tmp, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
| 	   | ||||
|     _Mat.MooeeDag(in, out); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, out); | ||||
|   } | ||||
| }; | ||||
|      | ||||
| template<class Matrix,class Field> | ||||
| class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  protected: | ||||
|   Matrix &_Mat; | ||||
|    | ||||
|  public: | ||||
|   NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){}; | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
| 	   | ||||
|     _Mat.Meooe(in, out); | ||||
|     _Mat.MooeeInv(out, tmp); | ||||
|     _Mat.Meooe(tmp, out); | ||||
|     _Mat.MooeeInv(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MooeeInvDag(in, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
|     _Mat.MooeeInvDag(tmp, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Matrix, class Field> | ||||
| class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  protected: | ||||
|   Matrix& _Mat; | ||||
|    | ||||
|  public: | ||||
|  NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){}; | ||||
|  | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MooeeInv(in, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|     _Mat.MooeeInv(tmp, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MeooeDag(in, out); | ||||
|     _Mat.MooeeInvDag(out, tmp); | ||||
|     _Mat.MeooeDag(tmp, out); | ||||
|     _Mat.MooeeInvDag(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | ||||
| // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | ||||
| template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| //  Staggered use | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> | ||||
| class SchurStaggeredOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|   Matrix &_Mat; | ||||
|   Field tmp; | ||||
|   RealD mass; | ||||
|       double tMpc; | ||||
|       double tIP; | ||||
|       double tMeo; | ||||
|       double taxpby_norm; | ||||
|       uint64_t ncall; | ||||
| public: | ||||
|       void Report(void) | ||||
|       { | ||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.Mpc "<< tMpc/ncall<<" usec "<<std::endl; | ||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.IP  "<< tIP /ncall<<" usec "<<std::endl; | ||||
| 	std::cout << GridLogMessage << " Mpc.MeoMoe        "<< tMeo/ncall<<" usec "<<std::endl; | ||||
| 	std::cout << GridLogMessage << " Mpc.axpby_norm    "<< taxpby_norm/ncall<<" usec "<<std::endl; | ||||
|       } | ||||
|  public: | ||||
|   SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  | ||||
|   {  | ||||
|     assert( _Mat.isTrivialEE() ); | ||||
|     mass = _Mat.Mass(); | ||||
| 	tMpc=0; | ||||
| 	tIP =0; | ||||
|         tMeo=0; | ||||
|         taxpby_norm=0; | ||||
| 	ncall=0; | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
| 	ncall++; | ||||
| 	tMpc-=usecond(); | ||||
|     n2 = Mpc(in,out); | ||||
| 	tMpc+=usecond(); | ||||
| 	tIP-=usecond(); | ||||
|     Mpc(in,out); | ||||
|     ComplexD dot= innerProduct(in,out); | ||||
| 	tIP+=usecond(); | ||||
|     n1 = real(dot); | ||||
|     n2 =0.0; | ||||
|   } | ||||
|   virtual void HermOp(const Field &in, Field &out){ | ||||
| 	ncall++; | ||||
| 	tMpc-=usecond(); | ||||
| 	_Mat.Meooe(in,out); | ||||
| 	_Mat.Meooe(out,tmp); | ||||
| 	tMpc+=usecond(); | ||||
| 	taxpby_norm-=usecond(); | ||||
| 	axpby(out,-1.0,mass*mass,tmp,in); | ||||
| 	taxpby_norm+=usecond(); | ||||
|     Mpc(in,out); | ||||
|     //    _Mat.Meooe(in,out); | ||||
|     //    _Mat.Meooe(out,tmp); | ||||
|     //    axpby(out,-1.0,mass*mass,tmp,in); | ||||
|   } | ||||
|   virtual  RealD Mpc      (const Field &in, Field &out)  | ||||
|   virtual  void Mpc      (const Field &in, Field &out)  | ||||
|   { | ||||
|  | ||||
|     Field tmp(in.Grid()); | ||||
|     Field tmp2(in.Grid()); | ||||
| 	 | ||||
|     //    std::cout << GridLogIterative << " HermOp.Mpc "<<std::endl; | ||||
|     _Mat.Mooee(in,out); | ||||
|     _Mat.Mooee(out,tmp); | ||||
|     //    std::cout << GridLogIterative << " HermOp.MooeeMooee "<<std::endl; | ||||
|     //    _Mat.Mooee(in,out); | ||||
|     //    _Mat.Mooee(out,tmp); | ||||
|  | ||||
|     tMeo-=usecond(); | ||||
|     _Mat.Meooe(in,out); | ||||
|     _Mat.Meooe(out,tmp); | ||||
|     tMeo+=usecond(); | ||||
|     taxpby_norm-=usecond(); | ||||
|     RealD nn=axpby_norm(out,-1.0,mass*mass,tmp,in); | ||||
|     taxpby_norm+=usecond(); | ||||
|     return nn; | ||||
|     axpby(out,-1.0,mass*mass,tmp,in); | ||||
|   } | ||||
|   virtual  RealD MpcDag   (const Field &in, Field &out){ | ||||
|     return Mpc(in,out); | ||||
|   virtual  void MpcDag   (const Field &in, Field &out){ | ||||
|     Mpc(in,out); | ||||
|   } | ||||
|   virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { | ||||
|   virtual void MpcDagMpc(const Field &in, Field &out) { | ||||
|     assert(0);// Never need with staggered | ||||
|   } | ||||
| }; | ||||
| template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | ||||
|  | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for functions of operators | ||||
| ///////////////////////////////////////////////////////////// | ||||
| @@ -434,11 +526,23 @@ public: | ||||
|       (*this)(Linop,in[k],out[k]); | ||||
|     } | ||||
|   }; | ||||
|   virtual ~OperatorFunction(){}; | ||||
| }; | ||||
|  | ||||
| template<class Field> class LinearFunction { | ||||
| public: | ||||
|   virtual void operator() (const Field &in, Field &out) = 0; | ||||
|  | ||||
|   virtual void operator() (const std::vector<Field> &in, std::vector<Field> &out) | ||||
|   { | ||||
|     assert(in.size() == out.size()); | ||||
|  | ||||
|     for (unsigned int i = 0; i < in.size(); ++i) | ||||
|     { | ||||
|       (*this)(in[i], out[i]); | ||||
|     } | ||||
|   } | ||||
|   virtual ~LinearFunction(){}; | ||||
| }; | ||||
|  | ||||
| template<class Field> class IdentityLinearFunction : public LinearFunction<Field> { | ||||
| @@ -484,6 +588,7 @@ class HermOpOperatorFunction : public OperatorFunction<Field> { | ||||
| template<typename Field> | ||||
| class PlainHermOp : public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   LinearOperatorBase<Field> &_Linop; | ||||
|        | ||||
|   PlainHermOp(LinearOperatorBase<Field>& linop) : _Linop(linop)  | ||||
| @@ -497,6 +602,7 @@ public: | ||||
| template<typename Field> | ||||
| class FunctionHermOp : public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator();  | ||||
|   OperatorFunction<Field>   & _poly; | ||||
|   LinearOperatorBase<Field> &_Linop; | ||||
|        | ||||
|   | ||||
| @@ -30,13 +30,19 @@ Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Field> using Preconditioner =  LinearFunction<Field> ; | ||||
|  | ||||
| /* | ||||
| template<class Field> class Preconditioner :  public LinearFunction<Field> { | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field & psi)=0; | ||||
| }; | ||||
| */ | ||||
|  | ||||
| template<class Field> class TrivialPrecon :  public Preconditioner<Field> {  | ||||
| public: | ||||
|   void operator()(const Field &src, Field & psi){ | ||||
|   using Preconditioner<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field & psi){ | ||||
|     psi = src; | ||||
|   } | ||||
|   TrivialPrecon(void){}; | ||||
|   | ||||
| @@ -38,20 +38,17 @@ template<class Field> class SparseMatrixBase { | ||||
| public: | ||||
|   virtual GridBase *Grid(void) =0; | ||||
|   // Full checkerboar operations | ||||
|   virtual RealD M    (const Field &in, Field &out)=0; | ||||
|   virtual RealD Mdag (const Field &in, Field &out)=0; | ||||
|   virtual void  MdagM(const Field &in, Field &out,RealD &ni,RealD &no) { | ||||
|     Field tmp (in.Grid()); | ||||
|     ni=M(in,tmp); | ||||
|     no=Mdag(tmp,out); | ||||
|   } | ||||
|   virtual void  M    (const Field &in, Field &out)=0; | ||||
|   virtual void  Mdag (const Field &in, Field &out)=0; | ||||
|   virtual void  MdagM(const Field &in, Field &out) { | ||||
|     RealD ni, no; | ||||
|     MdagM(in,out,ni,no); | ||||
|     Field tmp (in.Grid()); | ||||
|     M(in,tmp); | ||||
|     Mdag(tmp,out); | ||||
|   } | ||||
|   virtual  void Mdiag    (const Field &in, Field &out)=0; | ||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; | ||||
|   virtual  void MdirAll  (const Field &in, std::vector<Field> &out)=0; | ||||
|   virtual ~SparseMatrixBase() {}; | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -76,7 +73,7 @@ public: | ||||
|   virtual  void MeooeDag    (const Field &in, Field &out)=0; | ||||
|   virtual  void MooeeDag    (const Field &in, Field &out)=0; | ||||
|   virtual  void MooeeInvDag (const Field &in, Field &out)=0; | ||||
|  | ||||
|   virtual ~CheckerBoardedSparseMatrixBase() {}; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|   | ||||
| @@ -234,10 +234,8 @@ public: | ||||
|  | ||||
|     GridBase *grid=in.Grid(); | ||||
|  | ||||
|     // std::cout << "Chevyshef(): in.Grid()="<<in.Grid()<<std::endl; | ||||
|     //std::cout <<" Linop.Grid()="<<Linop.Grid()<<"Linop.RedBlackGrid()="<<Linop.RedBlackGrid()<<std::endl; | ||||
|  | ||||
|     int vol=grid->gSites(); | ||||
|     typedef typename Field::vector_type vector_type; | ||||
|  | ||||
|     Field T0(grid); T0 = in;   | ||||
|     Field T1(grid);  | ||||
| @@ -260,12 +258,12 @@ public: | ||||
|     for(int n=2;n<order;n++){ | ||||
|  | ||||
|       Linop.HermOp(*Tn,y); | ||||
|       //     y=xscale*y+mscale*(*Tn); | ||||
|       //      *Tnp=2.0*y-(*Tnm); | ||||
|       //      out=out+Coeffs[n]* (*Tnp); | ||||
|       axpby(y,xscale,mscale,y,(*Tn)); | ||||
|       axpby(*Tnp,2.0,-1.0,y,(*Tnm)); | ||||
|       if ( Coeffs[n] != 0.0) { | ||||
| 	axpy(out,Coeffs[n],*Tnp,out); | ||||
|       } | ||||
|  | ||||
|       // Cycle pointers to avoid copies | ||||
|       Field *swizzle = Tnm; | ||||
|       Tnm    =Tn; | ||||
|   | ||||
							
								
								
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,473 @@ | ||||
| #include<math.h> | ||||
| #include<stdio.h> | ||||
| #include<stdlib.h> | ||||
| #include<string> | ||||
| #include<iostream> | ||||
| #include<iomanip> | ||||
| #include<cassert> | ||||
|  | ||||
| #include<Grid/algorithms/approx/RemezGeneral.h> | ||||
|  | ||||
|  | ||||
| // Constructor | ||||
| AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision, | ||||
| 				 bigfloat (*f)(bigfloat x, void *data), void *data): f(f),  | ||||
| 										     data(data),  | ||||
| 										     prec(precision), | ||||
| 										     apstrt(lower), apend(upper), apwidt(upper - lower), | ||||
| 										     n(0), d(0), pow_n(0), pow_d(0) | ||||
| { | ||||
|   bigfloat::setDefaultPrecision(prec); | ||||
|  | ||||
|   std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n"; | ||||
|   std::cout<<"Precision of arithmetic is "<<precision<<std::endl; | ||||
| } | ||||
|  | ||||
| //Determine the properties of the numerator and denominator polynomials | ||||
| void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){ | ||||
|   pow_n = num_degree; | ||||
|   pow_d = den_degree; | ||||
|  | ||||
|   if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0); | ||||
|   if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0); | ||||
|  | ||||
|   if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0); | ||||
|   if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0); | ||||
|  | ||||
|   num_type = num_type_in; | ||||
|   den_type = den_type_in; | ||||
|  | ||||
|   num_pows.resize(pow_n+1); | ||||
|   den_pows.resize(pow_d+1); | ||||
|  | ||||
|   int n_in = 0; | ||||
|   bool odd = num_type == PolyType::Full || num_type == PolyType::Odd; | ||||
|   bool even = num_type == PolyType::Full || num_type == PolyType::Even; | ||||
|   for(int i=0;i<=pow_n;i++){ | ||||
|     num_pows[i] = -1; | ||||
|     if(i % 2 == 0 && even) num_pows[i] = n_in++; | ||||
|     if(i % 2 == 1 && odd) num_pows[i] = n_in++; | ||||
|   } | ||||
|  | ||||
|   std::cout << n_in << " terms in numerator" << std::endl; | ||||
|   --n_in; //power is 1 less than the number of terms, eg  pow=1   a x^1  + b x^0 | ||||
|  | ||||
|   int d_in = 0; | ||||
|   odd = den_type == PolyType::Full || den_type == PolyType::Odd; | ||||
|   even = den_type == PolyType::Full || den_type == PolyType::Even; | ||||
|   for(int i=0;i<=pow_d;i++){ | ||||
|     den_pows[i] = -1; | ||||
|     if(i % 2 == 0 && even) den_pows[i] = d_in++; | ||||
|     if(i % 2 == 1 && odd) den_pows[i] = d_in++; | ||||
|   } | ||||
|  | ||||
|   std::cout << d_in << " terms in denominator" << std::endl; | ||||
|   --d_in; | ||||
|  | ||||
|   n = n_in; | ||||
|   d = d_in; | ||||
| } | ||||
|  | ||||
| //Setup algorithm | ||||
| void AlgRemezGeneral::reinitializeAlgorithm(){ | ||||
|   spread = 1.0e37; | ||||
|   iter = 0; | ||||
|  | ||||
|   neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1 | ||||
|  | ||||
|   param.resize(neq); | ||||
|   yy.resize(neq+1); | ||||
|  | ||||
|   //Initialize linear equation temporaries | ||||
|   A.resize(neq*neq); | ||||
|   B.resize(neq); | ||||
|   IPS.resize(neq); | ||||
|  | ||||
|   //Initialize maximum and minimum errors | ||||
|   xx.resize(neq+2); | ||||
|   mm.resize(neq+1); | ||||
|   initialGuess(); | ||||
|  | ||||
|   //Initialize search steps | ||||
|   step.resize(neq+1); | ||||
|   stpini(); | ||||
| } | ||||
|  | ||||
| double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree,  | ||||
| 				       const PolyType num_type_in, const PolyType den_type_in,  | ||||
| 				       const double _tolerance, const int report_freq){ | ||||
|   //Setup the properties of the polynomial | ||||
|   setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in); | ||||
|  | ||||
|   //Setup the algorithm | ||||
|   reinitializeAlgorithm(); | ||||
|  | ||||
|   bigfloat tolerance = _tolerance; | ||||
|  | ||||
|   //Iterate until convergance | ||||
|   while (spread > tolerance) {  | ||||
|     if (iter++ % report_freq==0) | ||||
|       std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl;  | ||||
|  | ||||
|     equations(); | ||||
|     if (delta < tolerance) { | ||||
|       std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n"; | ||||
|       assert(0); | ||||
|     };     | ||||
|     assert( delta>= tolerance ); | ||||
|  | ||||
|     search(); | ||||
|   } | ||||
|  | ||||
|   int sign; | ||||
|   double error = (double)getErr(mm[0],&sign); | ||||
|   std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl; | ||||
|  | ||||
|   // Return the maximum error in the approximation | ||||
|   return error; | ||||
| } | ||||
|  | ||||
|  | ||||
| // Initial values of maximal and minimal errors | ||||
| void AlgRemezGeneral::initialGuess(){ | ||||
|   // Supply initial guesses for solution points | ||||
|   long ncheb = neq;			// Degree of Chebyshev error estimate | ||||
|  | ||||
|   // Find ncheb+1 extrema of Chebyshev polynomial | ||||
|   bigfloat a = ncheb; | ||||
|   bigfloat r; | ||||
|  | ||||
|   mm[0] = apstrt; | ||||
|   for (long i = 1; i < ncheb; i++) { | ||||
|     r = 0.5 * (1 - cos((M_PI * i)/(double) a)); | ||||
|     //r *= sqrt_bf(r); | ||||
|     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||
|     mm[i] = apstrt + r * apwidt; | ||||
|   } | ||||
|   mm[ncheb] = apend; | ||||
|  | ||||
|   a = 2.0 * ncheb; | ||||
|   for (long i = 0; i <= ncheb; i++) { | ||||
|     r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a)); | ||||
|     //r *= sqrt_bf(r); // Squeeze to low end of interval | ||||
|     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||
|     xx[i] = apstrt + r * apwidt; | ||||
|   } | ||||
| } | ||||
|  | ||||
| // Initialise step sizes | ||||
| void AlgRemezGeneral::stpini(){ | ||||
|   xx[neq+1] = apend; | ||||
|   delta = 0.25; | ||||
|   step[0] = xx[0] - apstrt; | ||||
|   for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1]; | ||||
|   step[neq] = step[neq-1]; | ||||
| } | ||||
|  | ||||
| // Search for error maxima and minima | ||||
| void AlgRemezGeneral::search(){ | ||||
|   bigfloat a, q, xm, ym, xn, yn, xx1; | ||||
|   int emsign, ensign, steps; | ||||
|  | ||||
|   int meq = neq + 1; | ||||
|  | ||||
|   bigfloat eclose = 1.0e30; | ||||
|   bigfloat farther = 0l; | ||||
|  | ||||
|   bigfloat xx0 = apstrt; | ||||
|  | ||||
|   for (int i = 0; i < meq; i++) { | ||||
|     steps = 0; | ||||
|     xx1 = xx[i]; // Next zero | ||||
|     if (i == meq-1) xx1 = apend; | ||||
|     xm = mm[i]; | ||||
|     ym = getErr(xm,&emsign); | ||||
|     q = step[i]; | ||||
|     xn = xm + q; | ||||
|     if (xn < xx0 || xn >= xx1) {	// Cannot skip over adjacent boundaries | ||||
|       q = -q; | ||||
|       xn = xm; | ||||
|       yn = ym; | ||||
|       ensign = emsign; | ||||
|     } else { | ||||
|       yn = getErr(xn,&ensign); | ||||
|       if (yn < ym) { | ||||
| 	q = -q; | ||||
| 	xn = xm; | ||||
| 	yn = ym; | ||||
| 	ensign = emsign; | ||||
|       } | ||||
|     } | ||||
|    | ||||
|     while(yn >= ym) {		// March until error becomes smaller. | ||||
|       if (++steps > 10) | ||||
|       	break; | ||||
|        | ||||
|       ym = yn; | ||||
|       xm = xn; | ||||
|       emsign = ensign; | ||||
|       a = xm + q; | ||||
|       if (a == xm || a <= xx0 || a >= xx1) | ||||
| 	break;// Must not skip over the zeros either side.       | ||||
|  | ||||
|       xn = a; | ||||
|       yn = getErr(xn,&ensign); | ||||
|     } | ||||
|  | ||||
|     mm[i] = xm;			// Position of maximum | ||||
|     yy[i] = ym;			// Value of maximum | ||||
|  | ||||
|     if (eclose > ym) eclose = ym; | ||||
|     if (farther < ym) farther = ym; | ||||
|  | ||||
|     xx0 = xx1; // Walk to next zero. | ||||
|   } // end of search loop | ||||
|  | ||||
|   q = (farther - eclose);	// Decrease step size if error spread increased | ||||
|  | ||||
|   if (eclose != 0.0) q /= eclose; // Relative error spread | ||||
|  | ||||
|   if (q >= spread) | ||||
|     delta *= 0.5; // Spread is increasing; decrease step size | ||||
|    | ||||
|   spread = q; | ||||
|  | ||||
|   for (int i = 0; i < neq; i++) { | ||||
|     q = yy[i+1]; | ||||
|     if (q != 0.0) q = yy[i] / q  - (bigfloat)1l; | ||||
|     else q = 0.0625; | ||||
|     if (q > (bigfloat)0.25) q = 0.25; | ||||
|     q *= mm[i+1] - mm[i]; | ||||
|     step[i] = q * delta; | ||||
|   } | ||||
|   step[neq] = step[neq-1]; | ||||
|    | ||||
|   for (int i = 0; i < neq; i++) {	// Insert new locations for the zeros. | ||||
|     xm = xx[i] - step[i]; | ||||
|  | ||||
|     if (xm <= apstrt) | ||||
|       continue; | ||||
|  | ||||
|     if (xm >= apend) | ||||
|       continue; | ||||
|  | ||||
|     if (xm <= mm[i]) | ||||
|       xm = (bigfloat)0.5 * (mm[i] + xx[i]);     | ||||
|  | ||||
|     if (xm >= mm[i+1]) | ||||
|       xm = (bigfloat)0.5 * (mm[i+1] + xx[i]); | ||||
|      | ||||
|     xx[i] = xm; | ||||
|   } | ||||
| } | ||||
|  | ||||
| // Solve the equations | ||||
| void AlgRemezGeneral::equations(){ | ||||
|   bigfloat x, y, z; | ||||
|   bigfloat *aa; | ||||
|    | ||||
|   for (int i = 0; i < neq; i++) {	// set up the equations for solution by simq() | ||||
|     int ip = neq * i;		// offset to 1st element of this row of matrix | ||||
|     x = xx[i];			// the guess for this row | ||||
|     y = func(x);		// right-hand-side vector | ||||
|  | ||||
|     z = (bigfloat)1l; | ||||
|     aa = A.data()+ip; | ||||
|     int t = 0; | ||||
|     for (int j = 0; j <= pow_n; j++) { | ||||
|       if(num_pows[j] != -1){ *aa++ = z; t++; } | ||||
|       z *= x; | ||||
|     } | ||||
|     assert(t == n+1); | ||||
|  | ||||
|     z = (bigfloat)1l; | ||||
|     t = 0; | ||||
|     for (int j = 0; j < pow_d; j++) { | ||||
|       if(den_pows[j] != -1){ *aa++ = -y * z; t++; } | ||||
|       z *= x; | ||||
|     } | ||||
|     assert(t == d); | ||||
|  | ||||
|     B[i] = y * z;		// Right hand side vector | ||||
|   } | ||||
|  | ||||
|   // Solve the simultaneous linear equations. | ||||
|   if (simq()){ | ||||
|     std::cout<<"simq failed\n"; | ||||
|     exit(0); | ||||
|   } | ||||
| } | ||||
|  | ||||
|  | ||||
| // Evaluate the rational form P(x)/Q(x) using coefficients | ||||
| // from the solution vector param | ||||
| bigfloat AlgRemezGeneral::approx(const bigfloat x) const{ | ||||
|   // Work backwards toward the constant term. | ||||
|   int c = n; | ||||
|   bigfloat yn = param[c--];		// Highest order numerator coefficient | ||||
|   for (int i = pow_n-1; i >= 0; i--) yn = x * yn  +  (num_pows[i] != -1 ? param[c--] : bigfloat(0l));   | ||||
|  | ||||
|   c = n+d; | ||||
|   bigfloat yd = 1l; //Highest degree coefficient is 1.0 | ||||
|   for (int i = pow_d-1; i >= 0; i--) yd = x * yd  +  (den_pows[i] != -1 ? param[c--] : bigfloat(0l));  | ||||
|  | ||||
|   return(yn/yd); | ||||
| } | ||||
|  | ||||
| // Compute size and sign of the approximation error at x | ||||
| bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{ | ||||
|   bigfloat f = func(x); | ||||
|   bigfloat e = approx(x) - f; | ||||
|   if (f != 0) e /= f; | ||||
|   if (e < (bigfloat)0.0) { | ||||
|     *sign = -1; | ||||
|     e = -e; | ||||
|   } | ||||
|   else *sign = 1; | ||||
|    | ||||
|   return(e); | ||||
| } | ||||
|  | ||||
| // Solve the system AX=B | ||||
| int AlgRemezGeneral::simq(){ | ||||
|  | ||||
|   int ip, ipj, ipk, ipn; | ||||
|   int idxpiv; | ||||
|   int kp, kp1, kpk, kpn; | ||||
|   int nip, nkp; | ||||
|   bigfloat em, q, rownrm, big, size, pivot, sum; | ||||
|   bigfloat *aa; | ||||
|   bigfloat *X = param.data(); | ||||
|  | ||||
|   int n = neq; | ||||
|   int nm1 = n - 1; | ||||
|   // Initialize IPS and X | ||||
|    | ||||
|   int ij = 0; | ||||
|   for (int i = 0; i < n; i++) { | ||||
|     IPS[i] = i; | ||||
|     rownrm = 0.0; | ||||
|     for(int j = 0; j < n; j++) { | ||||
|       q = abs_bf(A[ij]); | ||||
|       if(rownrm < q) rownrm = q; | ||||
|       ++ij; | ||||
|     } | ||||
|     if (rownrm == (bigfloat)0l) { | ||||
|       std::cout<<"simq rownrm=0\n"; | ||||
|       return(1); | ||||
|     } | ||||
|     X[i] = (bigfloat)1.0 / rownrm; | ||||
|   } | ||||
|    | ||||
|   for (int k = 0; k < nm1; k++) { | ||||
|     big = 0.0; | ||||
|     idxpiv = 0; | ||||
|      | ||||
|     for (int i = k; i < n; i++) { | ||||
|       ip = IPS[i]; | ||||
|       ipk = n*ip + k; | ||||
|       size = abs_bf(A[ipk]) * X[ip]; | ||||
|       if (size > big) { | ||||
| 	big = size; | ||||
| 	idxpiv = i; | ||||
|       } | ||||
|     } | ||||
|      | ||||
|     if (big == (bigfloat)0l) { | ||||
|       std::cout<<"simq big=0\n"; | ||||
|       return(2); | ||||
|     } | ||||
|     if (idxpiv != k) { | ||||
|       int j = IPS[k]; | ||||
|       IPS[k] = IPS[idxpiv]; | ||||
|       IPS[idxpiv] = j; | ||||
|     } | ||||
|     kp = IPS[k]; | ||||
|     kpk = n*kp + k; | ||||
|     pivot = A[kpk]; | ||||
|     kp1 = k+1; | ||||
|     for (int i = kp1; i < n; i++) { | ||||
|       ip = IPS[i]; | ||||
|       ipk = n*ip + k; | ||||
|       em = -A[ipk] / pivot; | ||||
|       A[ipk] = -em; | ||||
|       nip = n*ip; | ||||
|       nkp = n*kp; | ||||
|       aa = A.data()+nkp+kp1; | ||||
|       for (int j = kp1; j < n; j++) { | ||||
| 	ipj = nip + j; | ||||
| 	A[ipj] = A[ipj] + em * *aa++; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   kpn = n * IPS[n-1] + n - 1;	// last element of IPS[n] th row | ||||
|   if (A[kpn] == (bigfloat)0l) { | ||||
|     std::cout<<"simq A[kpn]=0\n"; | ||||
|     return(3); | ||||
|   } | ||||
|  | ||||
|    | ||||
|   ip = IPS[0]; | ||||
|   X[0] = B[ip]; | ||||
|   for (int i = 1; i < n; i++) { | ||||
|     ip = IPS[i]; | ||||
|     ipj = n * ip; | ||||
|     sum = 0.0; | ||||
|     for (int j = 0; j < i; j++) { | ||||
|       sum += A[ipj] * X[j]; | ||||
|       ++ipj; | ||||
|     } | ||||
|     X[i] = B[ip] - sum; | ||||
|   } | ||||
|    | ||||
|   ipn = n * IPS[n-1] + n - 1; | ||||
|   X[n-1] = X[n-1] / A[ipn]; | ||||
|    | ||||
|   for (int iback = 1; iback < n; iback++) { | ||||
|     //i goes (n-1),...,1 | ||||
|     int i = nm1 - iback; | ||||
|     ip = IPS[i]; | ||||
|     nip = n*ip; | ||||
|     sum = 0.0; | ||||
|     aa = A.data()+nip+i+1; | ||||
|     for (int j= i + 1; j < n; j++)  | ||||
|       sum += *aa++ * X[j]; | ||||
|     X[i] = (X[i] - sum) / A[nip+i]; | ||||
|   } | ||||
|    | ||||
|   return(0); | ||||
| } | ||||
|  | ||||
| void AlgRemezGeneral::csv(std::ostream & os) const{ | ||||
|   os << "Numerator" << std::endl; | ||||
|   for(int i=0;i<=pow_n;i++){ | ||||
|     os << getCoeffNum(i) << "*x^" << i; | ||||
|     if(i!=pow_n) os << " + "; | ||||
|   } | ||||
|   os << std::endl; | ||||
|  | ||||
|   os << "Denominator" << std::endl; | ||||
|   for(int i=0;i<=pow_d;i++){ | ||||
|     os << getCoeffDen(i) << "*x^" << i; | ||||
|     if(i!=pow_d) os << " + "; | ||||
|   } | ||||
|   os << std::endl; | ||||
|  | ||||
|   //For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc | ||||
|   int sign; | ||||
|   os << "Errors at maxima: coordinate, error, (sign)" << std::endl; | ||||
|   for(int i=0;i<neq+1;i++){  | ||||
|     os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl; | ||||
|   } | ||||
|  | ||||
|   os << "Scan over range:" << std::endl; | ||||
|   int npt = 60; | ||||
|   bigfloat dlt = (apend - apstrt)/bigfloat(npt-1); | ||||
|  | ||||
|   for (bigfloat x=apstrt; x<=apend; x = x + dlt) { | ||||
|     double f = evaluateFunc(x); | ||||
|     double r = evaluateApprox(x); | ||||
|     os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl; | ||||
|   } | ||||
|   return; | ||||
| } | ||||
							
								
								
									
										170
									
								
								Grid/algorithms/approx/RemezGeneral.h
									
									
									
									
									
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								Grid/algorithms/approx/RemezGeneral.h
									
									
									
									
									
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							| @@ -0,0 +1,170 @@ | ||||
| /* | ||||
|   C.Kelly Jan 2020 based on implementation by M. Clark May 2005 | ||||
|  | ||||
|   AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial  | ||||
|   It includes optional restriction to odd/even polynomials for the numerator and/or denominator | ||||
| */ | ||||
|  | ||||
| #ifndef INCLUDED_ALG_REMEZ_GENERAL_H | ||||
| #define INCLUDED_ALG_REMEZ_GENERAL_H | ||||
|  | ||||
| #include <stddef.h> | ||||
| #include <Grid/GridStd.h> | ||||
|  | ||||
| #ifdef HAVE_LIBGMP | ||||
| #include "bigfloat.h" | ||||
| #else | ||||
| #include "bigfloat_double.h" | ||||
| #endif | ||||
|  | ||||
|  | ||||
| class AlgRemezGeneral{ | ||||
|  public: | ||||
|   enum PolyType { Even, Odd, Full }; | ||||
|  | ||||
|  private: | ||||
|  | ||||
|   // In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer | ||||
|   bigfloat (*f)(bigfloat x, void *data); | ||||
|   void *data; | ||||
|  | ||||
|   // The approximation parameters | ||||
|   std::vector<bigfloat> param; | ||||
|   bigfloat norm; | ||||
|  | ||||
|   // The number of non-zero terms in the numerator and denominator | ||||
|   int n, d; | ||||
|   // The numerator and denominator degree (i.e.  the largest power) | ||||
|   int pow_n, pow_d; | ||||
|    | ||||
|   // Specify if the numerator and/or denominator are odd/even polynomials | ||||
|   PolyType num_type; | ||||
|   PolyType den_type; | ||||
|   std::vector<int> num_pows; //contains the mapping, with -1 if not present | ||||
|   std::vector<int> den_pows; | ||||
|  | ||||
|   // The bounds of the approximation | ||||
|   bigfloat apstrt, apwidt, apend; | ||||
|  | ||||
|   // Variables used to calculate the approximation | ||||
|   int nd1, iter; | ||||
|   std::vector<bigfloat> xx; | ||||
|   std::vector<bigfloat> mm; | ||||
|   std::vector<bigfloat> step; | ||||
|  | ||||
|   bigfloat delta, spread; | ||||
|    | ||||
|   // Variables used in search | ||||
|   std::vector<bigfloat> yy; | ||||
|  | ||||
|   // Variables used in solving linear equations | ||||
|   std::vector<bigfloat> A; | ||||
|   std::vector<bigfloat> B; | ||||
|   std::vector<int> IPS; | ||||
|  | ||||
|   // The number of equations we must solve at each iteration (n+d+1) | ||||
|   int neq; | ||||
|  | ||||
|   // The precision of the GNU MP library | ||||
|   long prec; | ||||
|  | ||||
|   // Initialize member variables associated with the polynomial's properties | ||||
|   void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in); | ||||
|  | ||||
|   // Initial values of maximal and minmal errors | ||||
|   void initialGuess(); | ||||
|  | ||||
|   // Initialise step sizes | ||||
|   void stpini(); | ||||
|  | ||||
|   // Initialize the algorithm | ||||
|   void reinitializeAlgorithm(); | ||||
|  | ||||
|   // Solve the equations | ||||
|   void equations(); | ||||
|  | ||||
|   // Search for error maxima and minima | ||||
|   void search();  | ||||
|  | ||||
|   // Calculate function required for the approximation | ||||
|   inline bigfloat func(bigfloat x) const{ | ||||
|     return f(x, data); | ||||
|   } | ||||
|  | ||||
|   // Compute size and sign of the approximation error at x | ||||
|   bigfloat getErr(bigfloat x, int *sign) const; | ||||
|  | ||||
|   // Solve the system AX=B   where X = param | ||||
|   int simq(); | ||||
|  | ||||
|   // Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param | ||||
|   bigfloat approx(bigfloat x) const; | ||||
|  | ||||
|  public: | ||||
|    | ||||
|   AlgRemezGeneral(double lower, double upper, long prec, | ||||
| 		  bigfloat (*f)(bigfloat x, void *data), void *data); | ||||
|  | ||||
|   inline int getDegree(void) const{  | ||||
|     assert(n==d); | ||||
|     return n; | ||||
|   } | ||||
|   // Reset the bounds of the approximation | ||||
|   inline void setBounds(double lower, double upper) { | ||||
|     apstrt = lower; | ||||
|     apend = upper; | ||||
|     apwidt = apend - apstrt; | ||||
|   } | ||||
|  | ||||
|   // Get the bounds of the approximation | ||||
|   inline void getBounds(double &lower, double &upper) const{  | ||||
|     lower=(double)apstrt; | ||||
|     upper=(double)apend; | ||||
|   } | ||||
|  | ||||
|   // Run the algorithm to generate the rational approximation | ||||
|   double generateApprox(int num_degree, int den_degree,  | ||||
| 			PolyType num_type, PolyType den_type, | ||||
| 			const double tolerance = 1e-15, const int report_freq = 1000); | ||||
|    | ||||
|   inline double generateApprox(int num_degree, int den_degree,  | ||||
| 			       const double tolerance = 1e-15, const int report_freq = 1000){ | ||||
|     return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq); | ||||
|   } | ||||
|    | ||||
|   // Evaluate the rational form P(x)/Q(x) using coefficients from the | ||||
|   // solution vector param | ||||
|   inline double evaluateApprox(double x) const{ | ||||
|     return (double)approx((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param | ||||
|   inline double evaluateInverseApprox(double x) const{ | ||||
|     return 1.0/(double)approx((bigfloat)x); | ||||
|   }   | ||||
|  | ||||
|   // Calculate function required for the approximation | ||||
|   inline double evaluateFunc(double x) const{ | ||||
|     return (double)func((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Calculate inverse function required for the approximation | ||||
|   inline double evaluateInverseFunc(double x) const{ | ||||
|     return 1.0/(double)func((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Dump csv of function, approx and error | ||||
|   void csv(std::ostream &os = std::cout) const; | ||||
|  | ||||
|   // Get the coefficient of the term x^i in the numerator | ||||
|   inline double getCoeffNum(const int i) const{     | ||||
|     return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]); | ||||
|   } | ||||
|   // Get the coefficient of the term x^i in the denominator | ||||
|   inline double getCoeffDen(const int i) const{  | ||||
|     if(i == pow_d) return 1.0; | ||||
|     else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]);  | ||||
|   } | ||||
| }; | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										183
									
								
								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
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								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
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							| @@ -0,0 +1,183 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/approx/ZMobius.cc | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #include <Grid/algorithms/approx/ZMobius.h> | ||||
| #include <Grid/algorithms/approx/RemezGeneral.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
|  | ||||
| //Compute the tanh approximation | ||||
| inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){ | ||||
|   int Ls = w.size(); | ||||
|  | ||||
|   ComplexD fxp = 1., fmp = 1.; | ||||
|   for(int i=0;i<Ls;i++){ | ||||
|     fxp = fxp * ( w[i] + x ); | ||||
|     fmp = fmp * ( w[i] - x ); | ||||
|   } | ||||
|   return ((fxp - fmp)/(fxp + fmp)).real(); | ||||
| } | ||||
| inline double epsilonMobius(const double x, const std::vector<RealD> &w){ | ||||
|   int Ls = w.size(); | ||||
|  | ||||
|   double fxp = 1., fmp = 1.; | ||||
|   for(int i=0;i<Ls;i++){ | ||||
|     fxp = fxp * ( w[i] + x ); | ||||
|     fmp = fmp * ( w[i] - x ); | ||||
|   } | ||||
|   return (fxp - fmp)/(fxp + fmp); | ||||
| } | ||||
|  | ||||
|  | ||||
|  | ||||
| //Compute the tanh approximation in a form suitable for the Remez | ||||
| bigfloat epsilonMobius(bigfloat x, void* data){ | ||||
|   const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data ); | ||||
|   bigfloat fxp(1.0); | ||||
|   bigfloat fmp(1.0); | ||||
|  | ||||
|   for(int i=0;i<omega.size();i++){ | ||||
|     fxp = fxp * ( bigfloat(omega[i]) + x); | ||||
|     fmp = fmp * ( bigfloat(omega[i]) - x); | ||||
|   } | ||||
|   return (fxp - fmp)/(fxp + fmp); | ||||
| } | ||||
|  | ||||
| //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||
| //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||
| 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound){ | ||||
|   assert(omega_in.size() == Ls_in); | ||||
|   omega_out.resize(Ls_out); | ||||
|  | ||||
|   //Use the Remez algorithm to generate the appropriate rational polynomial | ||||
|   //For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)   | ||||
|   AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in);  | ||||
|   remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100); | ||||
|   remez.csv(std::cout); | ||||
|  | ||||
|   //The rational approximation has the form  [ f(x) - f(-x) ] / [ f(x) + f(-x) ]  where  f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x ) | ||||
|   //cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7  pg 102 | ||||
|   //omega_i are therefore the negative of the complex roots of f(x) | ||||
|  | ||||
|   //We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial | ||||
|   // \rho(\lambda) = det( A - \lambda I )    where I is the unit matrix | ||||
|   //The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n   is the companion matrix  | ||||
|   // A = | 0    1   0    0 0 .... 0 | | ||||
|   //     | 0    0   1    0 0 .... 0 | | ||||
|   //     | :    :   :    : :      : | | ||||
|   //     | 0    0   0    0 0      1 | ||||
|   //     | -a0 -a1 -a2  ...  ... -an| | ||||
|  | ||||
|  | ||||
|   //Note the Remez defines the largest power to have unit coefficient | ||||
|   std::vector<RealD> coeffs(Ls_out+1); | ||||
|   for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers | ||||
|   for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers | ||||
|  | ||||
|   std::vector<std::complex<RealD> > roots(Ls_out); | ||||
|  | ||||
|   //Form the companion matrix | ||||
|   Eigen::MatrixXd compn(Ls_out,Ls_out); | ||||
|   for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.; | ||||
|   compn(Ls_out - 1, 0) = -coeffs[0]; | ||||
|    | ||||
|   for(int j=1;j<Ls_out;j++){ | ||||
|     for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.; | ||||
|     compn(Ls_out - 1, j) = -coeffs[j]; | ||||
|   } | ||||
|  | ||||
|   //Eigensolve | ||||
|   Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false); | ||||
|  | ||||
|   const auto & ev = slv.eigenvalues(); | ||||
|   for(int i=0;i<Ls_out;i++) | ||||
|     omega_out[i] = -ev(i); | ||||
|  | ||||
|   //Sort ascending (smallest at start of vector!) | ||||
|   std::sort(omega_out.begin(), omega_out.end(),  | ||||
| 	    [&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); }); | ||||
|  | ||||
|   //McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension | ||||
|   std::vector<ComplexD> omega_tmp = omega_out; | ||||
|   int s_low=0, s_high=Ls_out-1, ss=0; | ||||
|   for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega | ||||
|     int s_to; | ||||
|     if(ss % 2 == 0){ | ||||
|       s_to = s_low++; | ||||
|     }else{ | ||||
|       s_to = s_high--; | ||||
|     } | ||||
|     omega_out[s_to] = omega_tmp[s_from]; | ||||
|     ++ss; | ||||
|   } | ||||
|    | ||||
|   std::cout << "Resulting omega_i:" << std::endl;   | ||||
|   for(int i=0;i<Ls_out;i++) | ||||
|     std::cout << omega_out[i] << std::endl; | ||||
|  | ||||
|   std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl; | ||||
|   std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n"; | ||||
|    | ||||
|   int npt = 60; | ||||
|   double dlt = lambda_bound/double(npt-1); | ||||
|  | ||||
|   for (int i =0; i<npt; i++){ | ||||
|     double x = i*dlt; | ||||
|     double r = remez.evaluateApprox(x); | ||||
|     double p = epsilonMobius(x, omega_out); | ||||
|     double e = epsilonMobius(x, omega_in); | ||||
|  | ||||
|     std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl; | ||||
|   } | ||||
|  | ||||
| } | ||||
|    | ||||
| //mobius_param = b+c   with b-c=1 | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||
|   std::vector<RealD> omega_in(Ls_in, 1./mobius_param); | ||||
|   computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound); | ||||
| } | ||||
|  | ||||
| //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||
| 			 const RealD mobius_param_out, const int Ls_out,  | ||||
| 			 const RealD mobius_param_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound){ | ||||
|   computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound); | ||||
|   for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out; | ||||
| } | ||||
| //Assumes mobius_param_out == mobius_param_in | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||
|   computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound); | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,57 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/approx/ZMobius.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_ZMOBIUS_APPROX_H | ||||
| #define GRID_ZMOBIUS_APPROX_H | ||||
|  | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
|  | ||||
| //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||
| //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||
| 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound); | ||||
|    | ||||
| //mobius_param = b+c   with b-c=1 | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||
|  | ||||
| //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||
| 			 const RealD mobius_param_out, const int Ls_out,  | ||||
| 			 const RealD mobius_param_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound); | ||||
|  | ||||
| //Assumes mobius_param_out == mobius_param_in | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||
|  | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
|  | ||||
| #ifndef INCLUDED_BIGFLOAT_DOUBLE_H | ||||
| #define INCLUDED_BIGFLOAT_DOUBLE_H | ||||
|  | ||||
| #include <math.h> | ||||
|  | ||||
| typedef double mfloat;  | ||||
| @@ -186,4 +190,6 @@ public: | ||||
|   //  friend bigfloat& random(void); | ||||
| }; | ||||
|  | ||||
| #endif | ||||
|  | ||||
|  | ||||
|   | ||||
							
								
								
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,234 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/BiCGSTAB.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: juettner <juettner@soton.ac.uk> | ||||
| Author: David Murphy <djmurphy@mit.edu> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #ifndef GRID_BICGSTAB_H | ||||
| #define GRID_BICGSTAB_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
| template <class Field> | ||||
| class BiCGSTAB : public OperatorFunction<Field>  | ||||
| { | ||||
|   public: | ||||
|     using OperatorFunction<Field>::operator(); | ||||
|      | ||||
|     bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||
|                              // Defaults true. | ||||
|     RealD Tolerance; | ||||
|     Integer MaxIterations; | ||||
|     Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|    | ||||
|     BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) :  | ||||
|       Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){}; | ||||
|  | ||||
|     void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi)  | ||||
|     { | ||||
|       psi.Checkerboard() = src.Checkerboard(); | ||||
|       conformable(psi, src); | ||||
|  | ||||
|       RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1); | ||||
|       RealD a(0), bo(0), b(0), ssq(0); | ||||
|  | ||||
|       Field p(src); | ||||
|       Field r(src); | ||||
|       Field rhat(src); | ||||
|       Field v(src); | ||||
|       Field s(src); | ||||
|       Field t(src); | ||||
|       Field h(src); | ||||
|  | ||||
|       v = Zero(); | ||||
|       p = Zero(); | ||||
|  | ||||
|       // Initial residual computation & set up | ||||
|       RealD guess = norm2(psi); | ||||
|       assert(std::isnan(guess) == 0); | ||||
|      | ||||
|       Linop.Op(psi, v); | ||||
|       b = norm2(v); | ||||
|  | ||||
|       r = src - v; | ||||
|       rhat = r; | ||||
|       a = norm2(r); | ||||
|       ssq = norm2(src); | ||||
|  | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:   src " << ssq << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:    mp " << b << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:     r " << a << std::endl; | ||||
|  | ||||
|       RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|       // Check if guess is really REALLY good :) | ||||
|       if(a <= rsq){ return; } | ||||
|  | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl; | ||||
|  | ||||
|       GridStopWatch LinalgTimer; | ||||
|       GridStopWatch InnerTimer; | ||||
|       GridStopWatch AxpyNormTimer; | ||||
|       GridStopWatch LinearCombTimer; | ||||
|       GridStopWatch MatrixTimer; | ||||
|       GridStopWatch SolverTimer; | ||||
|  | ||||
|       SolverTimer.Start(); | ||||
|       int k; | ||||
|       for (k = 1; k <= MaxIterations; k++)  | ||||
|       { | ||||
|         rho_prev = rho; | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Crho  = innerProduct(rhat,r); | ||||
|         InnerTimer.Stop(); | ||||
|         rho = Crho.real(); | ||||
|  | ||||
|         beta = (rho / rho_prev) * (alpha / omega); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
|         bo = beta * omega; | ||||
| 	{ | ||||
| 	  autoView( p_v , p, AcceleratorWrite); | ||||
| 	  autoView( r_v , r, AcceleratorRead); | ||||
| 	  autoView( v_v , v, AcceleratorRead); | ||||
| 	  accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss)); | ||||
| 	    }); | ||||
| 	} | ||||
|         LinearCombTimer.Stop(); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         MatrixTimer.Start(); | ||||
|         Linop.Op(p,v); | ||||
|         MatrixTimer.Stop(); | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Calpha = innerProduct(rhat,v); | ||||
|         InnerTimer.Stop(); | ||||
|         alpha = rho / Calpha.real(); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
| 	{ | ||||
| 	  autoView( p_v , p, AcceleratorRead); | ||||
| 	  autoView( r_v , r, AcceleratorRead); | ||||
| 	  autoView( v_v , v, AcceleratorRead); | ||||
| 	  autoView( psi_v,psi, AcceleratorRead); | ||||
| 	  autoView( h_v  ,  h, AcceleratorWrite); | ||||
| 	  autoView( s_v  ,  s, AcceleratorWrite); | ||||
| 	  accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss)); | ||||
| 	    }); | ||||
| 	  accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss)); | ||||
|  	  }); | ||||
|         } | ||||
|         LinearCombTimer.Stop(); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         MatrixTimer.Start(); | ||||
|         Linop.Op(s,t); | ||||
|         MatrixTimer.Stop(); | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Comega = innerProduct(t,s); | ||||
|         InnerTimer.Stop(); | ||||
|         omega = Comega.real() / norm2(t); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
| 	{ | ||||
| 	  autoView( psi_v,psi, AcceleratorWrite); | ||||
| 	  autoView( r_v , r, AcceleratorWrite); | ||||
| 	  autoView( h_v , h, AcceleratorRead); | ||||
| 	  autoView( s_v , s, AcceleratorRead); | ||||
| 	  autoView( t_v , t, AcceleratorRead); | ||||
| 	  accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss)); | ||||
| 	      coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss)); | ||||
| 	    }); | ||||
| 	} | ||||
|         LinearCombTimer.Stop(); | ||||
| 	 | ||||
|         cp = norm2(r); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||
|  | ||||
|         // Stopping condition | ||||
|         if(cp <= rsq)  | ||||
|         { | ||||
|           SolverTimer.Stop(); | ||||
|           Linop.Op(psi, v); | ||||
|           p = v - src; | ||||
|  | ||||
|           RealD srcnorm = sqrt(norm2(src)); | ||||
|           RealD resnorm = sqrt(norm2(p)); | ||||
|           RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|           std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl; | ||||
|           std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl; | ||||
|           std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl; | ||||
|           std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||
|  | ||||
|           std::cout << GridLogMessage << "Time breakdown " << std::endl; | ||||
|           std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl; | ||||
|  | ||||
|           if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); } | ||||
|  | ||||
|           IterationsToComplete = k;	 | ||||
|  | ||||
|           return; | ||||
|         } | ||||
|       } | ||||
|        | ||||
|       std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl; | ||||
|  | ||||
|       if(ErrorOnNoConverge){ assert(0); } | ||||
|       IterationsToComplete = k; | ||||
|     } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										159
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										159
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,159 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
| Author: David Murphy <djmurphy@mit.edu> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #ifndef GRID_BICGSTAB_MIXED_PREC_H | ||||
| #define GRID_BICGSTAB_MIXED_PREC_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Mixed precision restarted defect correction BiCGSTAB | ||||
| template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD>  | ||||
| { | ||||
|   public: | ||||
|     using LinearFunction<FieldD>::operator(); | ||||
|     RealD   Tolerance; | ||||
|     RealD   InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|     Integer MaxInnerIterations; | ||||
|     Integer MaxOuterIterations; | ||||
|     GridBase* SinglePrecGrid; // Grid for single-precision fields | ||||
|     RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||
|     LinearOperatorBase<FieldF> &Linop_f; | ||||
|     LinearOperatorBase<FieldD> &Linop_d; | ||||
|  | ||||
|     Integer TotalInnerIterations; //Number of inner CG iterations | ||||
|     Integer TotalOuterIterations; //Number of restarts | ||||
|     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||
|  | ||||
|     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|     LinearFunction<FieldF> *guesser; | ||||
|      | ||||
|     MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid,  | ||||
|         LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) :  | ||||
|       Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit),  | ||||
|       MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {}; | ||||
|  | ||||
|     void useGuesser(LinearFunction<FieldF>& g){ | ||||
|       guesser = &g; | ||||
|     } | ||||
|    | ||||
|     void operator() (const FieldD& src_d_in, FieldD& sol_d) | ||||
|     { | ||||
|       TotalInnerIterations = 0; | ||||
|      | ||||
|       GridStopWatch TotalTimer; | ||||
|       TotalTimer.Start(); | ||||
|        | ||||
|       int cb = src_d_in.Checkerboard(); | ||||
|       sol_d.Checkerboard() = cb; | ||||
|        | ||||
|       RealD src_norm = norm2(src_d_in); | ||||
|       RealD stop = src_norm * Tolerance*Tolerance; | ||||
|  | ||||
|       GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||
|       FieldD tmp_d(DoublePrecGrid); | ||||
|       tmp_d.Checkerboard() = cb; | ||||
|        | ||||
|       FieldD tmp2_d(DoublePrecGrid); | ||||
|       tmp2_d.Checkerboard() = cb; | ||||
|        | ||||
|       FieldD src_d(DoublePrecGrid); | ||||
|       src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||
|        | ||||
|       RealD inner_tol = InnerTolerance; | ||||
|        | ||||
|       FieldF src_f(SinglePrecGrid); | ||||
|       src_f.Checkerboard() = cb; | ||||
|        | ||||
|       FieldF sol_f(SinglePrecGrid); | ||||
|       sol_f.Checkerboard() = cb; | ||||
|        | ||||
|       BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|       CG_f.ErrorOnNoConverge = false; | ||||
|  | ||||
|       GridStopWatch InnerCGtimer; | ||||
|  | ||||
|       GridStopWatch PrecChangeTimer; | ||||
|        | ||||
|       Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|          | ||||
|       for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++) | ||||
|       { | ||||
|         // Compute double precision rsd and also new RHS vector. | ||||
|         Linop_d.Op(sol_d, tmp_d); | ||||
|         RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector | ||||
|          | ||||
|         std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl; | ||||
|  | ||||
|         if(norm < OuterLoopNormMult * stop){ | ||||
|           std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl; | ||||
|           break; | ||||
|         } | ||||
|         while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ?? | ||||
|  | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(src_f, src_d); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         sol_f = Zero(); | ||||
|  | ||||
|         //Optionally improve inner solver guess (eg using known eigenvectors) | ||||
|         if(guesser != NULL){ (*guesser)(src_f, sol_f); } | ||||
|  | ||||
|         //Inner CG | ||||
|         CG_f.Tolerance = inner_tol; | ||||
|         InnerCGtimer.Start(); | ||||
|         CG_f(Linop_f, src_f, sol_f); | ||||
|         InnerCGtimer.Stop(); | ||||
|         TotalInnerIterations += CG_f.IterationsToComplete; | ||||
|          | ||||
|         //Convert sol back to double and add to double prec solution | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(tmp_d, sol_f); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         axpy(sol_d, 1.0, tmp_d, sol_d); | ||||
|       } | ||||
|        | ||||
|       //Final trial CG | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl; | ||||
|        | ||||
|       BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||
|       CG_d(Linop_d, src_d_in, sol_d); | ||||
|       TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||
|  | ||||
|       TotalTimer.Stop(); | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -52,6 +52,7 @@ class BlockConjugateGradient : public OperatorFunction<Field> { | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   Integer PrintInterval; //GridLogMessages or Iterative | ||||
|   RealD TrueResidual; | ||||
|    | ||||
|   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) | ||||
| @@ -306,7 +307,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|  | ||||
|       Linop.HermOp(X, AD); | ||||
|       AD = AD-B; | ||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl; | ||||
|       TrueResidual = std::sqrt(norm2(AD)/norm2(B)); | ||||
|       std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl; | ||||
|  | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| @@ -442,7 +444,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field & | ||||
|  | ||||
|       Linop.HermOp(Psi, AP); | ||||
|       AP = AP-Src; | ||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl; | ||||
|       TrueResidual = std::sqrt(norm2(AP)/norm2(Src)); | ||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||
|  | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| @@ -653,7 +656,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | ||||
|       if ( rr > max_resid ) max_resid = rr; | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< sqrt(rrsum/sssum) << " max "<< sqrt(max_resid) <<std::endl; | ||||
|     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl; | ||||
|  | ||||
|     if ( max_resid < Tolerance*Tolerance ) {  | ||||
|  | ||||
| @@ -668,7 +671,8 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | ||||
|  | ||||
|       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); | ||||
|       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; | ||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(normv(AD)/normv(B)) <<std::endl; | ||||
|       TrueResidual = std::sqrt(normv(AD)/normv(B)); | ||||
|       std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||
|  | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
|   | ||||
| @@ -49,6 +49,7 @@ public: | ||||
|   RealD Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   RealD TrueResidual; | ||||
|    | ||||
|   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), | ||||
| @@ -57,6 +58,7 @@ public: | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { | ||||
|  | ||||
|     GRID_TRACE("ConjugateGradient"); | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|  | ||||
|     conformable(psi, src); | ||||
| @@ -81,6 +83,14 @@ public: | ||||
|     cp = a; | ||||
|     ssq = norm2(src); | ||||
|  | ||||
|     // Handle trivial case of zero src | ||||
|     if (ssq == 0.){ | ||||
|       psi = Zero(); | ||||
|       IterationsToComplete = 1; | ||||
|       TrueResidual = 0.; | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; | ||||
| @@ -92,6 +102,7 @@ public: | ||||
|  | ||||
|     // Check if guess is really REALLY good :) | ||||
|     if (cp <= rsq) { | ||||
|       TrueResidual = std::sqrt(a/ssq); | ||||
|       std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl; | ||||
|       IterationsToComplete = 0;	 | ||||
|       return; | ||||
| @@ -107,9 +118,13 @@ public: | ||||
|     GridStopWatch MatrixTimer; | ||||
|     GridStopWatch SolverTimer; | ||||
|  | ||||
|     RealD usecs = -usecond(); | ||||
|     SolverTimer.Start(); | ||||
|     int k; | ||||
|     for (k = 1; k <= MaxIterations; k++) { | ||||
|  | ||||
|       GridStopWatch IterationTimer; | ||||
|       IterationTimer.Start(); | ||||
|       c = cp; | ||||
|  | ||||
|       MatrixTimer.Start(); | ||||
| @@ -130,49 +145,68 @@ public: | ||||
|       b = cp / c; | ||||
|  | ||||
|       LinearCombTimer.Start(); | ||||
|       auto psi_v = psi.View(); | ||||
|       auto p_v   = p.View(); | ||||
|       auto r_v   = r.View(); | ||||
|       { | ||||
| 	autoView( psi_v , psi, AcceleratorWrite); | ||||
| 	autoView( p_v   , p,   AcceleratorWrite); | ||||
| 	autoView( r_v   , r,   AcceleratorWrite); | ||||
| 	accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	    coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss)); | ||||
| 	    coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss)); | ||||
| 	}); | ||||
|       } | ||||
|       LinearCombTimer.Stop(); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       IterationTimer.Stop(); | ||||
|       if ( (k % 500) == 0 ) { | ||||
| 	std::cout << GridLogMessage << "ConjugateGradient: Iteration " << k | ||||
|                 << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||
|       } else {  | ||||
| 	std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k | ||||
|                 << " residual^2 " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||
| 		  << " residual " << sqrt(cp/ssq) << " target " << Tolerance << " took " << IterationTimer.Elapsed() << std::endl; | ||||
|       } | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
| 	usecs +=usecond(); | ||||
|         SolverTimer.Stop(); | ||||
|         Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||
|         p = mmp - src; | ||||
|  | ||||
| 	GridBase *grid = src.Grid(); | ||||
| 	RealD DwfFlops = (1452. )*grid->gSites()*4*k | ||||
|    	               + (8+4+8+4+4)*12*grid->gSites()*k; // CG linear algebra | ||||
|         RealD srcnorm = std::sqrt(norm2(src)); | ||||
|         RealD resnorm = std::sqrt(norm2(p)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage << "ConjugateGradient Converged on iteration " << k  | ||||
| 		  << "\tComputed residual " << std::sqrt(cp / ssq) | ||||
| 		  << "\tTrue residual " << true_residual | ||||
| 		  << "\tTarget " << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogIterative << "Time breakdown "<<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tInner      " << InnerTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogIterative << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | ||||
|         std::cout << GridLogMessage << "Time breakdown "<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | ||||
|  | ||||
| 	std::cout << GridLogDebug << "\tMobius flop rate " << DwfFlops/ usecs<< " Gflops " <<std::endl; | ||||
|  | ||||
|         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
| 	TrueResidual = true_residual; | ||||
|  | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|     // Failed. Calculate true residual before giving up                                                          | ||||
|     Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||
|     p = mmp - src; | ||||
|  | ||||
|     TrueResidual = sqrt(norm2(p)/ssq); | ||||
|  | ||||
|     std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) assert(0); | ||||
|   | ||||
| @@ -36,6 +36,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|     typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
|   class MixedPrecisionConjugateGradient : public LinearFunction<FieldD> { | ||||
|   public: | ||||
|     using LinearFunction<FieldD>::operator(); | ||||
|     RealD   Tolerance; | ||||
|     RealD   InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|     Integer MaxInnerIterations; | ||||
| @@ -48,6 +49,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|     Integer TotalInnerIterations; //Number of inner CG iterations | ||||
|     Integer TotalOuterIterations; //Number of restarts | ||||
|     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||
|     RealD TrueResidual; | ||||
|  | ||||
|     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|     LinearFunction<FieldF> *guesser; | ||||
| @@ -67,6 +69,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|     } | ||||
|    | ||||
|   void operator() (const FieldD &src_d_in, FieldD &sol_d){ | ||||
|     std::cout << GridLogMessage << "MixedPrecisionConjugateGradient: Starting mixed precision CG with outer tolerance " << Tolerance << " and inner tolerance " << InnerTolerance << std::endl; | ||||
|     TotalInnerIterations = 0; | ||||
| 	 | ||||
|     GridStopWatch TotalTimer; | ||||
| @@ -96,6 +99,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|     FieldF sol_f(SinglePrecGrid); | ||||
|     sol_f.Checkerboard() = cb; | ||||
|      | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Starting initial inner CG with tolerance " << inner_tol << std::endl; | ||||
|     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|     CG_f.ErrorOnNoConverge = false; | ||||
|  | ||||
| @@ -105,6 +109,9 @@ NAMESPACE_BEGIN(Grid); | ||||
|      | ||||
|     Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|  | ||||
|     precisionChangeWorkspace pc_wk_sp_to_dp(DoublePrecGrid, SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_dp_to_sp(SinglePrecGrid, DoublePrecGrid); | ||||
|      | ||||
|     for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++){ | ||||
|       //Compute double precision rsd and also new RHS vector. | ||||
|       Linop_d.HermOp(sol_d, tmp_d); | ||||
| @@ -119,7 +126,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|       while(norm * inner_tol * inner_tol < stop) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ?? | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(src_f, src_d); | ||||
|       precisionChange(src_f, src_d, pc_wk_dp_to_sp); | ||||
|       PrecChangeTimer.Stop(); | ||||
|        | ||||
|       sol_f = Zero(); | ||||
| @@ -129,6 +136,7 @@ NAMESPACE_BEGIN(Grid); | ||||
| 	(*guesser)(src_f, sol_f); | ||||
|  | ||||
|       //Inner CG | ||||
|       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration " << outer_iter << " starting inner CG with tolerance " << inner_tol << std::endl; | ||||
|       CG_f.Tolerance = inner_tol; | ||||
|       InnerCGtimer.Start(); | ||||
|       CG_f(Linop_f, src_f, sol_f); | ||||
| @@ -137,7 +145,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|        | ||||
|       //Convert sol back to double and add to double prec solution | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(tmp_d, sol_f); | ||||
|       precisionChange(tmp_d, sol_f, pc_wk_sp_to_dp); | ||||
|       PrecChangeTimer.Stop(); | ||||
|        | ||||
|       axpy(sol_d, 1.0, tmp_d, sol_d); | ||||
| @@ -149,6 +157,7 @@ NAMESPACE_BEGIN(Grid); | ||||
|     ConjugateGradient<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||
|     CG_d(Linop_d, src_d_in, sol_d); | ||||
|     TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||
|     TrueResidual = CG_d.TrueResidual; | ||||
|  | ||||
|     TotalTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||
|   | ||||
							
								
								
									
										213
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										213
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,213 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMixedPrecBatched.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
|     Author: Raoul Hodgson <raoul.hodgson@ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_MIXED_PREC_BATCHED_H | ||||
| #define GRID_CONJUGATE_GRADIENT_MIXED_PREC_BATCHED_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //Mixed precision restarted defect correction CG | ||||
| template<class FieldD,class FieldF,  | ||||
|   typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
|   typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class MixedPrecisionConjugateGradientBatched : public LinearFunction<FieldD> { | ||||
| public: | ||||
|   using LinearFunction<FieldD>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   RealD   InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|   Integer MaxInnerIterations; | ||||
|   Integer MaxOuterIterations; | ||||
|   Integer MaxPatchupIterations; | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   RealD OuterLoopNormMult; //Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||
|   LinearOperatorBase<FieldF> &Linop_f; | ||||
|   LinearOperatorBase<FieldD> &Linop_d; | ||||
|  | ||||
|   //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|   LinearFunction<FieldF> *guesser; | ||||
|   bool updateResidual; | ||||
|    | ||||
|   MixedPrecisionConjugateGradientBatched(RealD tol,  | ||||
|           Integer maxinnerit,  | ||||
|           Integer maxouterit,  | ||||
|           Integer maxpatchit, | ||||
|           GridBase* _sp_grid,  | ||||
|           LinearOperatorBase<FieldF> &_Linop_f,  | ||||
|           LinearOperatorBase<FieldD> &_Linop_d, | ||||
|           bool _updateResidual=true) : | ||||
|     Linop_f(_Linop_f), Linop_d(_Linop_d), | ||||
|     Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), MaxOuterIterations(maxouterit), MaxPatchupIterations(maxpatchit), SinglePrecGrid(_sp_grid), | ||||
|     OuterLoopNormMult(100.), guesser(NULL), updateResidual(_updateResidual) { }; | ||||
|  | ||||
|   void useGuesser(LinearFunction<FieldF> &g){ | ||||
|     guesser = &g; | ||||
|   } | ||||
|    | ||||
|   void operator() (const FieldD &src_d_in, FieldD &sol_d){ | ||||
|     std::vector<FieldD> srcs_d_in{src_d_in}; | ||||
|     std::vector<FieldD> sols_d{sol_d}; | ||||
|  | ||||
|     (*this)(srcs_d_in,sols_d); | ||||
|  | ||||
|     sol_d = sols_d[0]; | ||||
|   } | ||||
|  | ||||
|   void operator() (const std::vector<FieldD> &src_d_in, std::vector<FieldD> &sol_d){ | ||||
|     assert(src_d_in.size() == sol_d.size()); | ||||
|     int NBatch = src_d_in.size(); | ||||
|  | ||||
|     std::cout << GridLogMessage << "NBatch = " << NBatch << std::endl; | ||||
|  | ||||
|     Integer TotalOuterIterations = 0; //Number of restarts | ||||
|     std::vector<Integer> TotalInnerIterations(NBatch,0);     //Number of inner CG iterations | ||||
|     std::vector<Integer> TotalFinalStepIterations(NBatch,0); //Number of CG iterations in final patch-up step | ||||
|    | ||||
|     GridStopWatch TotalTimer; | ||||
|     TotalTimer.Start(); | ||||
|  | ||||
|     GridStopWatch InnerCGtimer; | ||||
|     GridStopWatch PrecChangeTimer; | ||||
|      | ||||
|     int cb = src_d_in[0].Checkerboard(); | ||||
|      | ||||
|     std::vector<RealD> src_norm; | ||||
|     std::vector<RealD> norm; | ||||
|     std::vector<RealD> stop; | ||||
|      | ||||
|     GridBase* DoublePrecGrid = src_d_in[0].Grid(); | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     tmp_d.Checkerboard() = cb; | ||||
|      | ||||
|     FieldD tmp2_d(DoublePrecGrid); | ||||
|     tmp2_d.Checkerboard() = cb; | ||||
|  | ||||
|     std::vector<FieldD> src_d; | ||||
|     std::vector<FieldF> src_f; | ||||
|     std::vector<FieldF> sol_f; | ||||
|  | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       sol_d[i].Checkerboard() = cb; | ||||
|  | ||||
|       src_norm.push_back(norm2(src_d_in[i])); | ||||
|       norm.push_back(0.); | ||||
|       stop.push_back(src_norm[i] * Tolerance*Tolerance); | ||||
|  | ||||
|       src_d.push_back(src_d_in[i]); //source for next inner iteration, computed from residual during operation | ||||
|  | ||||
|       src_f.push_back(SinglePrecGrid); | ||||
|       src_f[i].Checkerboard() = cb; | ||||
|  | ||||
|       sol_f.push_back(SinglePrecGrid); | ||||
|       sol_f[i].Checkerboard() = cb; | ||||
|     } | ||||
|      | ||||
|     RealD inner_tol = InnerTolerance; | ||||
|      | ||||
|     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|     CG_f.ErrorOnNoConverge = false; | ||||
|      | ||||
|     Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|        | ||||
|     for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++){ | ||||
|       std::cout << GridLogMessage << std::endl; | ||||
|       std::cout << GridLogMessage << "Outer iteration " << outer_iter << std::endl; | ||||
|        | ||||
|       bool allConverged = true; | ||||
|        | ||||
|       for (int i=0; i<NBatch; i++) { | ||||
|         //Compute double precision rsd and also new RHS vector. | ||||
|         Linop_d.HermOp(sol_d[i], tmp_d); | ||||
|         norm[i] = axpy_norm(src_d[i], -1., tmp_d, src_d_in[i]); //src_d is residual vector | ||||
|          | ||||
|         std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Outer iteration " << outer_iter <<" solve " << i << " residual "<< norm[i] << " target "<< stop[i] <<std::endl; | ||||
|  | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(src_f[i], src_d[i]); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         sol_f[i] = Zero(); | ||||
|        | ||||
|         if(norm[i] > OuterLoopNormMult * stop[i]) { | ||||
|           allConverged = false; | ||||
|         } | ||||
|       } | ||||
|       if (allConverged) break; | ||||
|  | ||||
|       if (updateResidual) { | ||||
|         RealD normMax = *std::max_element(std::begin(norm), std::end(norm)); | ||||
|         RealD stopMax = *std::max_element(std::begin(stop), std::end(stop)); | ||||
|         while( normMax * inner_tol * inner_tol < stopMax) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ?? | ||||
|         CG_f.Tolerance = inner_tol; | ||||
|       } | ||||
|  | ||||
|       //Optionally improve inner solver guess (eg using known eigenvectors) | ||||
|       if(guesser != NULL) { | ||||
|         (*guesser)(src_f, sol_f); | ||||
|       } | ||||
|  | ||||
|       for (int i=0; i<NBatch; i++) { | ||||
|         //Inner CG | ||||
|         InnerCGtimer.Start(); | ||||
|         CG_f(Linop_f, src_f[i], sol_f[i]); | ||||
|         InnerCGtimer.Stop(); | ||||
|         TotalInnerIterations[i] += CG_f.IterationsToComplete; | ||||
|          | ||||
|         //Convert sol back to double and add to double prec solution | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(tmp_d, sol_f[i]); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         axpy(sol_d[i], 1.0, tmp_d, sol_d[i]); | ||||
|       } | ||||
|  | ||||
|     } | ||||
|      | ||||
|     //Final trial CG | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Starting final patch-up double-precision solve"<<std::endl; | ||||
|      | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       ConjugateGradient<FieldD> CG_d(Tolerance, MaxPatchupIterations); | ||||
|       CG_d(Linop_d, src_d_in[i], sol_d[i]); | ||||
|       TotalFinalStepIterations[i] += CG_d.IterationsToComplete; | ||||
|     } | ||||
|  | ||||
|     TotalTimer.Stop(); | ||||
|  | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: solve " << i << " Inner CG iterations " << TotalInnerIterations[i] << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations[i] << std::endl; | ||||
|     } | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||
|      | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -44,17 +44,21 @@ public: | ||||
|  | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   //  RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :  | ||||
|   ConjugateGradientMultiShift(Integer maxit, const MultiShiftFunction &_shifts) :  | ||||
|     MaxIterations(maxit), | ||||
|     shifts(_shifts) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||
| @@ -80,6 +84,7 @@ public: | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &psi) | ||||
|   { | ||||
|     GRID_TRACE("ConjugateGradientMultiShift"); | ||||
|    | ||||
|     GridBase *grid = src.Grid(); | ||||
|    | ||||
| @@ -125,6 +130,17 @@ public: | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s | ||||
| @@ -168,6 +184,9 @@ public: | ||||
|       axpby(psi[s],0.,-bs[s]*alpha[s],src,src); | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << "ConjugateGradientMultiShift: initial rn (|src|^2) =" << rn << " qq (|MdagM src|^2) =" << qq << " d ( dot(src, [MdagM + m_0]src) ) =" << d << " c=" << c << std::endl; | ||||
|      | ||||
|    | ||||
|   /////////////////////////////////////// | ||||
|   // Timers | ||||
|   /////////////////////////////////////// | ||||
| @@ -270,6 +289,7 @@ public: | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| @@ -299,13 +319,14 @@ public: | ||||
| 	  axpy(r,-alpha[s],src,tmp); | ||||
| 	  RealD rn = norm2(r); | ||||
| 	  RealD cn = norm2(src); | ||||
| 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<<std::sqrt(rn/cn)<<std::endl; | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl; | ||||
| 	} | ||||
|  | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tAXPY     " << AXPYTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMarix    " << MatrixTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMatrix   " << MatrixTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
|  | ||||
|       IterationsToComplete = k;	 | ||||
|   | ||||
							
								
								
									
										373
									
								
								Grid/algorithms/iterative/ConjugateGradientMultiShiftCleanup.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										373
									
								
								Grid/algorithms/iterative/ConjugateGradientMultiShiftCleanup.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,373 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMultiShift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christopher Kelly <ckelly@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //CK 2020: A variant of the multi-shift conjugate gradient with the matrix multiplication in single precision.  | ||||
| //The residual is stored in single precision, but the search directions and solution are stored in double precision.  | ||||
| //Every update_freq iterations the residual is corrected in double precision.  | ||||
| //For safety the a final regular CG is applied to clean up if necessary | ||||
|  | ||||
| //PB Pure single, then double fixup | ||||
|  | ||||
| template<class FieldD, class FieldF, | ||||
| 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
| 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class ConjugateGradientMultiShiftMixedPrecCleanup : public OperatorMultiFunction<FieldD>, | ||||
| 					     public OperatorFunction<FieldD> | ||||
| { | ||||
| public:                                                 | ||||
|  | ||||
|   using OperatorFunction<FieldD>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterationsMshift; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   int ReliableUpdateFreq; //number of iterations between reliable updates | ||||
|  | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   LinearOperatorBase<FieldF> &Linop_f; //single precision | ||||
|  | ||||
|   ConjugateGradientMultiShiftMixedPrecCleanup(Integer maxit, const MultiShiftFunction &_shifts, | ||||
| 				       GridBase* _SinglePrecGrid, LinearOperatorBase<FieldF> &_Linop_f, | ||||
| 				       int _ReliableUpdateFreq) :  | ||||
|     MaxIterationsMshift(maxit),  shifts(_shifts), SinglePrecGrid(_SinglePrecGrid), Linop_f(_Linop_f), ReliableUpdateFreq(_ReliableUpdateFreq), | ||||
|     MaxIterations(20000) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, FieldD &psi) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     int nshift = shifts.order; | ||||
|     std::vector<FieldD> results(nshift,grid); | ||||
|     (*this)(Linop,src,results,psi); | ||||
|   } | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, std::vector<FieldD> &results, FieldD &psi) | ||||
|   { | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     (*this)(Linop,src,results); | ||||
|    | ||||
|     psi = shifts.norm*src; | ||||
|     for(int i=0;i<nshift;i++){ | ||||
|       psi = psi + shifts.residues[i]*results[i]; | ||||
|     } | ||||
|  | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop_d, const FieldD &src_d, std::vector<FieldD> &psi_d) | ||||
|   {  | ||||
|     GRID_TRACE("ConjugateGradientMultiShiftMixedPrecCleanup"); | ||||
|     GridBase *DoublePrecGrid = src_d.Grid(); | ||||
|  | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     // Convenience references to the info stored in "MultiShiftFunction" | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     std::vector<RealD> &mass(shifts.poles); // Make references to array in "shifts" | ||||
|     std::vector<RealD> &mresidual(shifts.tolerances); | ||||
|     std::vector<RealD> alpha(nshift,1.0); | ||||
|  | ||||
|     //Double precision search directions | ||||
|     FieldD p_d(DoublePrecGrid); | ||||
|     std::vector<FieldF> ps_f (nshift, SinglePrecGrid);// Search directions (single precision) | ||||
|     std::vector<FieldF> psi_f(nshift, SinglePrecGrid);// solutions (single precision) | ||||
|  | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     FieldD r_d(DoublePrecGrid); | ||||
|     FieldF r_f(SinglePrecGrid); | ||||
|     FieldD mmp_d(DoublePrecGrid); | ||||
|  | ||||
|     assert(psi_d.size()==nshift); | ||||
|     assert(mass.size()==nshift); | ||||
|     assert(mresidual.size()==nshift); | ||||
|    | ||||
|     // dynamic sized arrays on stack; 2d is a pain with vector | ||||
|     RealD  bs[nshift]; | ||||
|     RealD  rsq[nshift]; | ||||
|     RealD  rsqf[nshift]; | ||||
|     RealD  z[nshift][2]; | ||||
|     int     converged[nshift]; | ||||
|    | ||||
|     const int       primary =0; | ||||
|    | ||||
|     //Primary shift fields CG iteration | ||||
|     RealD a,b,c,d; | ||||
|     RealD cp,bp,qq; //prev | ||||
|    | ||||
|     // Matrix mult fields | ||||
|     FieldF p_f(SinglePrecGrid); | ||||
|     FieldF mmp_f(SinglePrecGrid); | ||||
|  | ||||
|     // Check lightest mass | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       assert( mass[s]>= mass[primary] ); | ||||
|       converged[s]=0; | ||||
|     } | ||||
|    | ||||
|     // Wire guess to zero | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src_d); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi_d[s] = Zero(); | ||||
| 	psi_f[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       rsqf[s] =rsq[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: shift "<< s <<" target resid "<<rsq[s]<<std::endl; | ||||
|       //      ps_d[s] = src_d; | ||||
|       precisionChange(ps_f[s],src_d); | ||||
|     } | ||||
|     // r and p for primary | ||||
|     p_d = src_d; //primary copy --- make this a reference to ps_d to save axpys | ||||
|     r_d = p_d; | ||||
|      | ||||
|     //MdagM+m[0] | ||||
|     precisionChange(p_f,p_d); | ||||
|     Linop_f.HermOpAndNorm(p_f,mmp_f,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     precisionChange(tmp_d,mmp_f); | ||||
|     Linop_d.HermOpAndNorm(p_d,mmp_d,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     tmp_d = tmp_d - mmp_d; | ||||
|     std::cout << " Testing operators match "<<norm2(mmp_d)<<" f "<<norm2(mmp_f)<<" diff "<< norm2(tmp_d)<<std::endl; | ||||
|     //    assert(norm2(tmp_d)< 1.0e-4); | ||||
|  | ||||
|     axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|     RealD rn = norm2(p_d); | ||||
|     d += rn*mass[0]; | ||||
|  | ||||
|     b = -cp /d; | ||||
|    | ||||
|     // Set up the various shift variables | ||||
|     int       iz=0; | ||||
|     z[0][1-iz] = 1.0; | ||||
|     z[0][iz]   = 1.0; | ||||
|     bs[0]      = b; | ||||
|     for(int s=1;s<nshift;s++){ | ||||
|       z[s][1-iz] = 1.0; | ||||
|       z[s][iz]   = 1.0/( 1.0 - b*(mass[s]-mass[0])); | ||||
|       bs[s]      = b*z[s][iz];  | ||||
|     } | ||||
|    | ||||
|     // r += b[0] A.p[0] | ||||
|     // c= norm(r) | ||||
|     c=axpy_norm(r_d,b,mmp_d,r_d); | ||||
|    | ||||
|     for(int s=0;s<nshift;s++) { | ||||
|       axpby(psi_d[s],0.,-bs[s]*alpha[s],src_d,src_d); | ||||
|       precisionChange(psi_f[s],psi_d[s]); | ||||
|     } | ||||
|    | ||||
|     /////////////////////////////////////// | ||||
|     // Timers | ||||
|     /////////////////////////////////////// | ||||
|     GridStopWatch AXPYTimer, ShiftTimer, QRTimer, MatrixTimer, SolverTimer, PrecChangeTimer, CleanupTimer; | ||||
|  | ||||
|     SolverTimer.Start(); | ||||
|    | ||||
|     // Iteration loop | ||||
|     int k; | ||||
|    | ||||
|     for (k=1;k<=MaxIterationsMshift;k++){     | ||||
|  | ||||
|       a = c /cp; | ||||
|       AXPYTimer.Start(); | ||||
|       axpy(p_d,a,p_d,r_d);  | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(r_f, r_d); | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	if ( ! converged[s] ) {  | ||||
| 	  if (s==0){ | ||||
| 	    axpy(ps_f[s],a,ps_f[s],r_f); | ||||
| 	  } else{ | ||||
| 	    RealD as =a *z[s][iz]*bs[s] /(z[s][1-iz]*b); | ||||
| 	    axpby(ps_f[s],z[s][iz],as,r_f,ps_f[s]); | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       cp=c; | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(p_f, p_d); //get back single prec search direction for linop | ||||
|       PrecChangeTimer.Stop(); | ||||
|       MatrixTimer.Start();   | ||||
|       Linop_f.HermOp(p_f,mmp_f); | ||||
|       MatrixTimer.Stop();   | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(mmp_d, mmp_f); // From Float to Double | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       d=real(innerProduct(p_d,mmp_d));     | ||||
|       axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|       RealD rn = norm2(p_d); | ||||
|       d += rn*mass[0]; | ||||
|      | ||||
|       bp=b; | ||||
|       b=-cp/d; | ||||
|  | ||||
|       // Toggle the recurrence history | ||||
|       bs[0] = b; | ||||
|       iz = 1-iz; | ||||
|       ShiftTimer.Start(); | ||||
|       for(int s=1;s<nshift;s++){ | ||||
| 	if((!converged[s])){ | ||||
| 	  RealD z0 = z[s][1-iz]; | ||||
| 	  RealD z1 = z[s][iz]; | ||||
| 	  z[s][iz] = z0*z1*bp | ||||
| 	    / (b*a*(z1-z0) + z1*bp*(1- (mass[s]-mass[0])*b));  | ||||
| 	  bs[s] = b*z[s][iz]/z0; // NB sign  rel to Mike | ||||
| 	} | ||||
|       } | ||||
|       ShiftTimer.Stop(); | ||||
|  | ||||
|       //Update single precision solutions | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	int ss = s; | ||||
| 	if( (!converged[s]) ) {  | ||||
| 	  axpy(psi_f[ss],-bs[s]*alpha[s],ps_f[s],psi_f[ss]); | ||||
| 	} | ||||
|       } | ||||
|       c = axpy_norm(r_d,b,mmp_d,r_d); | ||||
|       AXPYTimer.Stop(); | ||||
|      | ||||
|       // Convergence checks | ||||
|       int all_converged = 1; | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| 	  if(css<rsqf[s]){ | ||||
| 	    if ( ! converged[s] ) | ||||
| 	      std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup k="<<k<<" Shift "<<s<<" has converged"<<std::endl; | ||||
| 	    converged[s]=1; | ||||
| 	  } else { | ||||
| 	    all_converged=0; | ||||
| 	  } | ||||
|  | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if ( all_converged || k == MaxIterationsMshift-1){ | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	for(int s=0;s<nshift;s++){ | ||||
| 	  precisionChange(psi_d[s],psi_f[s]); | ||||
| 	} | ||||
|  | ||||
| 	 | ||||
| 	if ( all_converged ){ | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: All shifts have converged iteration "<<k<<std::endl; | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: Checking solutions"<<std::endl; | ||||
| 	} else { | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: Not all shifts have converged iteration "<<k<<std::endl; | ||||
| 	} | ||||
| 	 | ||||
| 	// Check answers  | ||||
| 	for(int s=0; s < nshift; s++) {  | ||||
| 	  Linop_d.HermOpAndNorm(psi_d[s],mmp_d,d,qq); | ||||
| 	  axpy(tmp_d,mass[s],psi_d[s],mmp_d); | ||||
| 	  axpy(r_d,-alpha[s],src_d,tmp_d); | ||||
| 	  RealD rn = norm2(r_d); | ||||
| 	  RealD cn = norm2(src_d); | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: shift["<<s<<"] true residual "<< TrueResidualShift[s] << " target " << mresidual[s] << std::endl; | ||||
|  | ||||
| 	  //If we have not reached the desired tolerance, do a (mixed precision) CG cleanup | ||||
| 	  if(rn >= rsq[s]){ | ||||
| 	    CleanupTimer.Start(); | ||||
| 	    std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: performing cleanup step for shift " << s << std::endl; | ||||
|  | ||||
| 	    //Setup linear operators for final cleanup | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldD> Linop_shift_d(Linop_d, mass[s]); | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldF> Linop_shift_f(Linop_f, mass[s]); | ||||
| 					        | ||||
| 	    MixedPrecisionConjugateGradient<FieldD,FieldF> cg(mresidual[s], MaxIterations, MaxIterations, SinglePrecGrid, Linop_shift_f, Linop_shift_d);  | ||||
| 	    cg(src_d, psi_d[s]); | ||||
| 	     | ||||
| 	    TrueResidualShift[s] = cg.TrueResidual; | ||||
| 	    CleanupTimer.Stop(); | ||||
| 	  } | ||||
| 	} | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientMultiShiftMixedPrecCleanup: Time Breakdown for body"<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tAXPY    " << AXPYTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tMatrix    " << MatrixTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tPrecision Change " << PrecChangeTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tFinal Cleanup " << CleanupTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver+Cleanup " << SolverTimer.Elapsed() + CleanupTimer.Elapsed() << std::endl; | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
|  | ||||
| 	return; | ||||
|       } | ||||
|     | ||||
|     } | ||||
|     std::cout<<GridLogMessage<<"CG multi shift did not converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										416
									
								
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										Normal file
									
								
							
							
						
						
									
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								Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,416 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMultiShift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christopher Kelly <ckelly@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_MULTI_SHIFT_MIXEDPREC_H | ||||
| #define GRID_CONJUGATE_GRADIENT_MULTI_SHIFT_MIXEDPREC_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //CK 2020: A variant of the multi-shift conjugate gradient with the matrix multiplication in single precision.  | ||||
| //The residual is stored in single precision, but the search directions and solution are stored in double precision.  | ||||
| //Every update_freq iterations the residual is corrected in double precision.  | ||||
|      | ||||
| //For safety the a final regular CG is applied to clean up if necessary | ||||
|  | ||||
| //Linop to add shift to input linop, used in cleanup CG | ||||
| namespace ConjugateGradientMultiShiftMixedPrecSupport{ | ||||
| template<typename Field> | ||||
| class ShiftedLinop: public LinearOperatorBase<Field>{ | ||||
| public: | ||||
|   LinearOperatorBase<Field> &linop_base; | ||||
|   RealD shift; | ||||
|  | ||||
|   ShiftedLinop(LinearOperatorBase<Field> &_linop_base, RealD _shift): linop_base(_linop_base), shift(_shift){} | ||||
|  | ||||
|   void OpDiag (const Field &in, Field &out){ assert(0); } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp){ assert(0); } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ assert(0); } | ||||
|    | ||||
|   void Op     (const Field &in, Field &out){ assert(0); } | ||||
|   void AdjOp  (const Field &in, Field &out){ assert(0); } | ||||
|  | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     linop_base.HermOp(in, out); | ||||
|     axpy(out, shift, in, out); | ||||
|   }     | ||||
|  | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
| }; | ||||
| }; | ||||
|  | ||||
|  | ||||
| template<class FieldD, class FieldF, | ||||
| 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
| 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class ConjugateGradientMultiShiftMixedPrec : public OperatorMultiFunction<FieldD>, | ||||
| 					     public OperatorFunction<FieldD> | ||||
| { | ||||
| public:                                                 | ||||
|  | ||||
|   using OperatorFunction<FieldD>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterationsMshift; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   int ReliableUpdateFreq; //number of iterations between reliable updates | ||||
|  | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   LinearOperatorBase<FieldF> &Linop_f; //single precision | ||||
|  | ||||
|   ConjugateGradientMultiShiftMixedPrec(Integer maxit, const MultiShiftFunction &_shifts, | ||||
| 				       GridBase* _SinglePrecGrid, LinearOperatorBase<FieldF> &_Linop_f, | ||||
| 				       int _ReliableUpdateFreq) :  | ||||
|     MaxIterationsMshift(maxit),  shifts(_shifts), SinglePrecGrid(_SinglePrecGrid), Linop_f(_Linop_f), ReliableUpdateFreq(_ReliableUpdateFreq), | ||||
|     MaxIterations(20000) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, FieldD &psi) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     int nshift = shifts.order; | ||||
|     std::vector<FieldD> results(nshift,grid); | ||||
|     (*this)(Linop,src,results,psi); | ||||
|   } | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, std::vector<FieldD> &results, FieldD &psi) | ||||
|   { | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     (*this)(Linop,src,results); | ||||
|    | ||||
|     psi = shifts.norm*src; | ||||
|     for(int i=0;i<nshift;i++){ | ||||
|       psi = psi + shifts.residues[i]*results[i]; | ||||
|     } | ||||
|  | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop_d, const FieldD &src_d, std::vector<FieldD> &psi_d) | ||||
|   {  | ||||
|     GRID_TRACE("ConjugateGradientMultiShiftMixedPrec"); | ||||
|     GridBase *DoublePrecGrid = src_d.Grid(); | ||||
|  | ||||
|     precisionChangeWorkspace pc_wk_s_to_d(DoublePrecGrid,SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_d_to_s(SinglePrecGrid,DoublePrecGrid); | ||||
|      | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     // Convenience references to the info stored in "MultiShiftFunction" | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     std::vector<RealD> &mass(shifts.poles); // Make references to array in "shifts" | ||||
|     std::vector<RealD> &mresidual(shifts.tolerances); | ||||
|     std::vector<RealD> alpha(nshift,1.0); | ||||
|  | ||||
|     //Double precision search directions | ||||
|     FieldD p_d(DoublePrecGrid); | ||||
|     std::vector<FieldD> ps_d(nshift, DoublePrecGrid);// Search directions (double precision) | ||||
|  | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     FieldD r_d(DoublePrecGrid); | ||||
|     FieldD mmp_d(DoublePrecGrid); | ||||
|  | ||||
|     assert(psi_d.size()==nshift); | ||||
|     assert(mass.size()==nshift); | ||||
|     assert(mresidual.size()==nshift); | ||||
|    | ||||
|     // dynamic sized arrays on stack; 2d is a pain with vector | ||||
|     RealD  bs[nshift]; | ||||
|     RealD  rsq[nshift]; | ||||
|     RealD  rsqf[nshift]; | ||||
|     RealD  z[nshift][2]; | ||||
|     int     converged[nshift]; | ||||
|    | ||||
|     const int       primary =0; | ||||
|    | ||||
|     //Primary shift fields CG iteration | ||||
|     RealD a,b,c,d; | ||||
|     RealD cp,bp,qq; //prev | ||||
|    | ||||
|     // Matrix mult fields | ||||
|     FieldF p_f(SinglePrecGrid); | ||||
|     FieldF mmp_f(SinglePrecGrid); | ||||
|  | ||||
|     // Check lightest mass | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       assert( mass[s]>= mass[primary] ); | ||||
|       converged[s]=0; | ||||
|     } | ||||
|    | ||||
|     // Wire guess to zero | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src_d); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi_d[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       rsqf[s] =rsq[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: shift "<< s <<" target resid "<<rsq[s]<<std::endl; | ||||
|       ps_d[s] = src_d; | ||||
|     } | ||||
|     // r and p for primary | ||||
|     p_d = src_d; //primary copy --- make this a reference to ps_d to save axpys | ||||
|     r_d = p_d; | ||||
|      | ||||
|     //MdagM+m[0] | ||||
|     precisionChange(p_f, p_d, pc_wk_d_to_s); | ||||
|  | ||||
|     Linop_f.HermOpAndNorm(p_f,mmp_f,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     precisionChange(tmp_d, mmp_f, pc_wk_s_to_d); | ||||
|     Linop_d.HermOpAndNorm(p_d,mmp_d,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     tmp_d = tmp_d - mmp_d; | ||||
|     std::cout << " Testing operators match "<<norm2(mmp_d)<<" f "<<norm2(mmp_f)<<" diff "<< norm2(tmp_d)<<std::endl; | ||||
|     assert(norm2(tmp_d)< 1.0); | ||||
|  | ||||
|     axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|     RealD rn = norm2(p_d); | ||||
|     d += rn*mass[0]; | ||||
|  | ||||
|     b = -cp /d; | ||||
|    | ||||
|     // Set up the various shift variables | ||||
|     int       iz=0; | ||||
|     z[0][1-iz] = 1.0; | ||||
|     z[0][iz]   = 1.0; | ||||
|     bs[0]      = b; | ||||
|     for(int s=1;s<nshift;s++){ | ||||
|       z[s][1-iz] = 1.0; | ||||
|       z[s][iz]   = 1.0/( 1.0 - b*(mass[s]-mass[0])); | ||||
|       bs[s]      = b*z[s][iz];  | ||||
|     } | ||||
|    | ||||
|     // r += b[0] A.p[0] | ||||
|     // c= norm(r) | ||||
|     c=axpy_norm(r_d,b,mmp_d,r_d); | ||||
|    | ||||
|     for(int s=0;s<nshift;s++) { | ||||
|       axpby(psi_d[s],0.,-bs[s]*alpha[s],src_d,src_d); | ||||
|     } | ||||
|    | ||||
|     /////////////////////////////////////// | ||||
|     // Timers | ||||
|     /////////////////////////////////////// | ||||
|     GridStopWatch AXPYTimer, ShiftTimer, QRTimer, MatrixTimer, SolverTimer, PrecChangeTimer, CleanupTimer; | ||||
|  | ||||
|     SolverTimer.Start(); | ||||
|    | ||||
|     // Iteration loop | ||||
|     int k; | ||||
|    | ||||
|     for (k=1;k<=MaxIterationsMshift;k++){     | ||||
|  | ||||
|       a = c /cp; | ||||
|       AXPYTimer.Start(); | ||||
|       axpy(p_d,a,p_d,r_d);  | ||||
|  | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	if ( ! converged[s] ) {  | ||||
| 	  if (s==0){ | ||||
| 	    axpy(ps_d[s],a,ps_d[s],r_d); | ||||
| 	  } else{ | ||||
| 	    RealD as =a *z[s][iz]*bs[s] /(z[s][1-iz]*b); | ||||
| 	    axpby(ps_d[s],z[s][iz],as,r_d,ps_d[s]); | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(p_f, p_d, pc_wk_d_to_s); //get back single prec search direction for linop | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       cp=c; | ||||
|       MatrixTimer.Start();   | ||||
|       Linop_f.HermOp(p_f,mmp_f); | ||||
|       MatrixTimer.Stop();   | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(mmp_d, mmp_f, pc_wk_s_to_d); // From Float to Double | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       AXPYTimer.Start(); | ||||
|       d=real(innerProduct(p_d,mmp_d));     | ||||
|       axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|       AXPYTimer.Stop(); | ||||
|       RealD rn = norm2(p_d); | ||||
|       d += rn*mass[0]; | ||||
|      | ||||
|       bp=b; | ||||
|       b=-cp/d; | ||||
|  | ||||
|       // Toggle the recurrence history | ||||
|       bs[0] = b; | ||||
|       iz = 1-iz; | ||||
|       ShiftTimer.Start(); | ||||
|       for(int s=1;s<nshift;s++){ | ||||
| 	if((!converged[s])){ | ||||
| 	  RealD z0 = z[s][1-iz]; | ||||
| 	  RealD z1 = z[s][iz]; | ||||
| 	  z[s][iz] = z0*z1*bp | ||||
| 	    / (b*a*(z1-z0) + z1*bp*(1- (mass[s]-mass[0])*b));  | ||||
| 	  bs[s] = b*z[s][iz]/z0; // NB sign  rel to Mike | ||||
| 	} | ||||
|       } | ||||
|       ShiftTimer.Stop(); | ||||
|  | ||||
|       //Update double precision solutions | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	int ss = s; | ||||
| 	if( (!converged[s]) ) {  | ||||
| 	  axpy(psi_d[ss],-bs[s]*alpha[s],ps_d[s],psi_d[ss]); | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       //Perform reliable update if necessary; otherwise update residual from single-prec mmp | ||||
|       c = axpy_norm(r_d,b,mmp_d,r_d); | ||||
|  | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       if(k % ReliableUpdateFreq == 0){ | ||||
| 	RealD c_old = c; | ||||
| 	//Replace r with true residual | ||||
| 	MatrixTimer.Start();   | ||||
| 	Linop_d.HermOp(psi_d[0],mmp_d);  | ||||
| 	MatrixTimer.Stop();   | ||||
|  | ||||
| 	AXPYTimer.Start(); | ||||
| 	axpy(mmp_d,mass[0],psi_d[0],mmp_d); | ||||
|  | ||||
| 	c = axpy_norm(r_d, -1.0, mmp_d, src_d); | ||||
| 	AXPYTimer.Stop(); | ||||
|  | ||||
| 	std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec k="<<k<< ", replaced |r|^2 = "<<c_old <<" with |r|^2 = "<<c<<std::endl; | ||||
|       } | ||||
|      | ||||
|       // Convergence checks | ||||
|       int all_converged = 1; | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| 	  if(css<rsqf[s]){ | ||||
| 	    if ( ! converged[s] ) | ||||
| 	      std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec k="<<k<<" Shift "<<s<<" has converged"<<std::endl; | ||||
| 	    converged[s]=1; | ||||
| 	  } else { | ||||
| 	    all_converged=0; | ||||
| 	  } | ||||
|  | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if ( all_converged || k == MaxIterationsMshift-1){ | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	if ( all_converged ){ | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: All shifts have converged iteration "<<k<<std::endl; | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: Checking solutions"<<std::endl; | ||||
| 	} else { | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: Not all shifts have converged iteration "<<k<<std::endl; | ||||
| 	} | ||||
| 	 | ||||
| 	// Check answers  | ||||
| 	for(int s=0; s < nshift; s++) {  | ||||
| 	  Linop_d.HermOpAndNorm(psi_d[s],mmp_d,d,qq); | ||||
| 	  axpy(tmp_d,mass[s],psi_d[s],mmp_d); | ||||
| 	  axpy(r_d,-alpha[s],src_d,tmp_d); | ||||
| 	  RealD rn = norm2(r_d); | ||||
| 	  RealD cn = norm2(src_d); | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: shift["<<s<<"] true residual "<< TrueResidualShift[s] << " target " << mresidual[s] << std::endl; | ||||
|  | ||||
| 	  //If we have not reached the desired tolerance, do a (mixed precision) CG cleanup | ||||
| 	  if(rn >= rsq[s]){ | ||||
| 	    CleanupTimer.Start(); | ||||
| 	    std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: performing cleanup step for shift " << s << std::endl; | ||||
|  | ||||
| 	    //Setup linear operators for final cleanup | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldD> Linop_shift_d(Linop_d, mass[s]); | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldF> Linop_shift_f(Linop_f, mass[s]); | ||||
| 					        | ||||
| 	    MixedPrecisionConjugateGradient<FieldD,FieldF> cg(mresidual[s], MaxIterations, MaxIterations, SinglePrecGrid, Linop_shift_f, Linop_shift_d);  | ||||
| 	    cg(src_d, psi_d[s]); | ||||
| 	     | ||||
| 	    TrueResidualShift[s] = cg.TrueResidual; | ||||
| 	    CleanupTimer.Stop(); | ||||
| 	  } | ||||
| 	} | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientMultiShiftMixedPrec: Time Breakdown for body"<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tAXPY    " << AXPYTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tMatrix    " << MatrixTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tPrecision Change " << PrecChangeTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tFinal Cleanup " << CleanupTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver+Cleanup " << SolverTimer.Elapsed() + CleanupTimer.Elapsed() << std::endl; | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
|  | ||||
| 	return; | ||||
|       } | ||||
|     | ||||
|     } | ||||
|     std::cout<<GridLogMessage<<"CG multi shift did not converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -48,7 +48,7 @@ public: | ||||
|   LinearOperatorBase<FieldF> &Linop_f; | ||||
|   LinearOperatorBase<FieldD> &Linop_d; | ||||
|   GridBase* SinglePrecGrid; | ||||
|   RealD Delta; //reliable update parameter | ||||
|   RealD Delta; //reliable update parameter. A reliable update is performed when the residual drops by a factor of Delta relative to its value at the last update | ||||
|  | ||||
|   //Optional ability to switch to a different linear operator once the tolerance reaches a certain point. Useful for single/half -> single/single | ||||
|   LinearOperatorBase<FieldF> *Linop_fallback; | ||||
| @@ -65,7 +65,9 @@ public: | ||||
|       ErrorOnNoConverge(err_on_no_conv), | ||||
|       DoFinalCleanup(true), | ||||
|       Linop_fallback(NULL) | ||||
|   {}; | ||||
|   { | ||||
|     assert(Delta > 0. && Delta < 1. && "Expect  0 < Delta < 1"); | ||||
|   }; | ||||
|  | ||||
|   void setFallbackLinop(LinearOperatorBase<FieldF> &_Linop_fallback, const RealD _fallback_transition_tol){ | ||||
|     Linop_fallback = &_Linop_fallback; | ||||
| @@ -73,6 +75,7 @@ public: | ||||
|   } | ||||
|      | ||||
|   void operator()(const FieldD &src, FieldD &psi) { | ||||
|     GRID_TRACE("ConjugateGradientReliableUpdate"); | ||||
|     LinearOperatorBase<FieldF> *Linop_f_use = &Linop_f; | ||||
|     bool using_fallback = false; | ||||
|        | ||||
| @@ -115,9 +118,12 @@ public: | ||||
|     } | ||||
|  | ||||
|     //Single prec initialization | ||||
|     precisionChangeWorkspace pc_wk_sp_to_dp(src.Grid(), SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_dp_to_sp(SinglePrecGrid, src.Grid()); | ||||
|      | ||||
|     FieldF r_f(SinglePrecGrid); | ||||
|     r_f.Checkerboard() = r.Checkerboard(); | ||||
|     precisionChange(r_f, r); | ||||
|     precisionChange(r_f, r, pc_wk_dp_to_sp); | ||||
|  | ||||
|     FieldF psi_f(r_f); | ||||
|     psi_f = Zero(); | ||||
| @@ -133,6 +139,7 @@ public: | ||||
|     GridStopWatch LinalgTimer; | ||||
|     GridStopWatch MatrixTimer; | ||||
|     GridStopWatch SolverTimer; | ||||
|     GridStopWatch PrecChangeTimer; | ||||
|      | ||||
|     SolverTimer.Start(); | ||||
|     int k = 0; | ||||
| @@ -172,7 +179,9 @@ public: | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
| 	//Although not written in the paper, I assume that I have to add on the final solution | ||||
| 	precisionChange(mmp, psi_f); | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(mmp, psi_f, pc_wk_sp_to_dp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	psi = psi + mmp; | ||||
| 	 | ||||
| 	 | ||||
| @@ -193,6 +202,9 @@ public: | ||||
| 	std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tPrecChange " << PrecChangeTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tPrecChange avg time " << PrecChangeTimer.Elapsed()/(2*l+1) <<std::endl; | ||||
|  | ||||
| 	 | ||||
| 	IterationsToComplete = k;	 | ||||
| 	ReliableUpdatesPerformed = l; | ||||
| @@ -213,14 +225,21 @@ public: | ||||
|       else if(cp < Delta * MaxResidSinceLastRelUp) { //reliable update | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate " | ||||
| 		  << cp << "(residual) < " << Delta << "(Delta) * " << MaxResidSinceLastRelUp << "(MaxResidSinceLastRelUp) on iteration " << k << " : performing reliable update\n"; | ||||
| 	precisionChange(mmp, psi_f); | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(mmp, psi_f, pc_wk_sp_to_dp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	psi = psi + mmp; | ||||
|  | ||||
| 	MatrixTimer.Start(); | ||||
| 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | ||||
| 	MatrixTimer.Stop(); | ||||
| 	 | ||||
| 	r = src - mmp; | ||||
|  | ||||
| 	psi_f = Zero(); | ||||
| 	precisionChange(r_f, r); | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(r_f, r, pc_wk_dp_to_sp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	cp = norm2(r); | ||||
| 	MaxResidSinceLastRelUp = cp; | ||||
|  | ||||
|   | ||||
| @@ -33,16 +33,19 @@ namespace Grid { | ||||
| template<class Field> | ||||
| class ZeroGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|     virtual void operator()(const Field &src, Field &guess) { guess = Zero(); }; | ||||
| }; | ||||
| template<class Field> | ||||
| class DoNothingGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field &guess) {  }; | ||||
| }; | ||||
| template<class Field> | ||||
| class SourceGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field &guess) { guess = src; }; | ||||
| }; | ||||
|  | ||||
| @@ -54,15 +57,24 @@ class DeflatedGuesser: public LinearFunction<Field> { | ||||
| private: | ||||
|   const std::vector<Field> &evec; | ||||
|   const std::vector<RealD> &eval; | ||||
|   const unsigned int       N; | ||||
|  | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|  | ||||
|   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) : evec(_evec), eval(_eval) {}; | ||||
|   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) | ||||
|   : DeflatedGuesser(_evec, _eval, _evec.size()) | ||||
|   {} | ||||
|  | ||||
|   DeflatedGuesser(const std::vector<Field> & _evec, const std::vector<RealD> & _eval, const unsigned int _N) | ||||
|   : evec(_evec), eval(_eval), N(_N) | ||||
|   { | ||||
|     assert(evec.size()==eval.size()); | ||||
|     assert(N <= evec.size()); | ||||
|   }  | ||||
|  | ||||
|   virtual void operator()(const Field &src,Field &guess) { | ||||
|     guess = Zero(); | ||||
|     assert(evec.size()==eval.size()); | ||||
|     auto N = evec.size(); | ||||
|     for (int i=0;i<N;i++) { | ||||
|       const Field& tmp = evec[i]; | ||||
|       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); | ||||
| @@ -79,6 +91,7 @@ private: | ||||
|   const std::vector<RealD>       &eval_coarse; | ||||
| public: | ||||
|    | ||||
|   using LinearFunction<FineField>::operator(); | ||||
|   LocalCoherenceDeflatedGuesser(const std::vector<FineField>   &_subspace, | ||||
| 				const std::vector<CoarseField> &_evec_coarse, | ||||
| 				const std::vector<RealD>       &_eval_coarse) | ||||
| @@ -100,7 +113,43 @@ public: | ||||
|     blockPromote(guess_coarse,guess,subspace); | ||||
|     guess.Checkerboard() = src.Checkerboard(); | ||||
|   }; | ||||
| }; | ||||
|  | ||||
|   void operator()(const std::vector<FineField> &src,std::vector<FineField> &guess) { | ||||
|     int Nevec = (int)evec_coarse.size(); | ||||
|     int Nsrc = (int)src.size(); | ||||
|     // make temp variables | ||||
|     std::vector<CoarseField> src_coarse(Nsrc,evec_coarse[0].Grid()); | ||||
|     std::vector<CoarseField> guess_coarse(Nsrc,evec_coarse[0].Grid());     | ||||
|     //Preporcessing | ||||
|     std::cout << GridLogMessage << "Start BlockProject for loop" << std::endl; | ||||
|     for (int j=0;j<Nsrc;j++) | ||||
|     { | ||||
|     guess_coarse[j] = Zero(); | ||||
|     std::cout << GridLogMessage << "BlockProject iter: " << j << std::endl; | ||||
|     blockProject(src_coarse[j],src[j],subspace); | ||||
|     } | ||||
|     //deflation set up for eigen vector batchsize 1 and source batch size equal number of sources | ||||
|     std::cout << GridLogMessage << "Start ProjectAccum for loop" << std::endl; | ||||
|     for (int i=0;i<Nevec;i++) | ||||
|     { | ||||
|       std::cout << GridLogMessage << "ProjectAccum Nvec: " << i << std::endl; | ||||
|       const CoarseField & tmp = evec_coarse[i]; | ||||
|       for (int j=0;j<Nsrc;j++) | ||||
|       { | ||||
|         axpy(guess_coarse[j],TensorRemove(innerProduct(tmp,src_coarse[j])) / eval_coarse[i],tmp,guess_coarse[j]); | ||||
|       } | ||||
|     } | ||||
|     //postprocessing | ||||
|     std::cout << GridLogMessage << "Start BlockPromote for loop" << std::endl; | ||||
|     for (int j=0;j<Nsrc;j++) | ||||
|     { | ||||
|     std::cout << GridLogMessage << "BlockProject iter: " << j << std::endl; | ||||
|     blockPromote(guess_coarse[j],guess[j],subspace); | ||||
|     guess[j].Checkerboard() = src[j].Checkerboard(); | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   }; | ||||
|  | ||||
|  | ||||
|  | ||||
|   | ||||
							
								
								
									
										1412
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczos.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										1412
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczos.h
									
									
									
									
									
										Normal file
									
								
							
										
											
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							| @@ -37,211 +37,6 @@ Author: Christoph Lehner <clehner@bnl.gov> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
|  | ||||
|   //////////////////////////////////////////////////////// | ||||
|   // Move following 100 LOC to lattice/Lattice_basis.h | ||||
|   //////////////////////////////////////////////////////// | ||||
| template<class Field> | ||||
| void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  | ||||
| { | ||||
|   // If assume basis[j] are already orthonormal, | ||||
|   // can take all inner products in parallel saving 2x bandwidth | ||||
|   // Save 3x bandwidth on the second line of loop. | ||||
|   // perhaps 2.5x speed up. | ||||
|   // 2x overall in Multigrid Lanczos   | ||||
|   for(int j=0; j<k; ++j){ | ||||
|     auto ip = innerProduct(basis[j],w); | ||||
|     w = w - ip*basis[j]; | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| void basisRotate(std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j0, int j1, int k0,int k1,int Nm)  | ||||
| { | ||||
|   typedef decltype(basis[0].View()) View; | ||||
|   auto tmp_v = basis[0].View(); | ||||
|   Vector<View> basis_v(basis.size(),tmp_v); | ||||
|   typedef typename Field::vector_object vobj; | ||||
|   GridBase* grid = basis[0].Grid(); | ||||
|  | ||||
|   for(int k=0;k<basis.size();k++){ | ||||
|     basis_v[k] = basis[k].View(); | ||||
|   } | ||||
| #if 0 | ||||
|   std::vector < vobj , commAllocator<vobj> > Bt(thread_max() * Nm); // Thread private | ||||
|   thread_region | ||||
|   { | ||||
|     vobj* B = Bt.data() + Nm * thread_num(); | ||||
|  | ||||
|     thread_for_in_region(ss, grid->oSites(),{ | ||||
|       for(int j=j0; j<j1; ++j) B[j]=0.; | ||||
|        | ||||
|       for(int j=j0; j<j1; ++j){ | ||||
| 	for(int k=k0; k<k1; ++k){ | ||||
| 	  B[j] +=Qt(j,k) * basis_v[k][ss]; | ||||
| 	} | ||||
|       } | ||||
|       for(int j=j0; j<j1; ++j){ | ||||
| 	basis_v[j][ss] = B[j]; | ||||
|       } | ||||
|     }); | ||||
|   } | ||||
| #else | ||||
|  | ||||
|   int nrot = j1-j0; | ||||
|  | ||||
|  | ||||
|   uint64_t oSites   =grid->oSites(); | ||||
|   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead | ||||
|  | ||||
|   //  printf("BasisRotate %d %d nrot %d siteBlock %d\n",j0,j1,nrot,siteBlock); | ||||
|  | ||||
|   Vector <vobj> Bt(siteBlock * nrot);  | ||||
|   auto Bp=&Bt[0]; | ||||
|  | ||||
|   // GPU readable copy of Eigen matrix | ||||
|   Vector<double> Qt_jv(Nm*Nm); | ||||
|   double *Qt_p = & Qt_jv[0]; | ||||
|   for(int k=0;k<Nm;++k){ | ||||
|     for(int j=0;j<Nm;++j){ | ||||
|       Qt_p[j*Nm+k]=Qt(j,k); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   // Block the loop to keep storage footprint down | ||||
|   vobj zz=Zero(); | ||||
|   for(uint64_t s=0;s<oSites;s+=siteBlock){ | ||||
|  | ||||
|     // remaining work in this block | ||||
|     int ssites=MIN(siteBlock,oSites-s); | ||||
|  | ||||
|     // zero out the accumulators | ||||
|     accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{ | ||||
| 	auto z=coalescedRead(zz); | ||||
| 	coalescedWrite(Bp[ss],z); | ||||
|     }); | ||||
|  | ||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||
| 	 | ||||
|       int j =sj%nrot; | ||||
|       int jj  =j0+j; | ||||
|       int ss =sj/nrot; | ||||
|       int sss=ss+s; | ||||
|  | ||||
|       for(int k=k0; k<k1; ++k){ | ||||
| 	auto tmp = coalescedRead(Bp[ss*nrot+j]); | ||||
| 	coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss])); | ||||
|       } | ||||
|     }); | ||||
|  | ||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||
|       int j =sj%nrot; | ||||
|       int jj  =j0+j; | ||||
|       int ss =sj/nrot; | ||||
|       int sss=ss+s; | ||||
|       coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j])); | ||||
|     }); | ||||
|   } | ||||
| #endif | ||||
| } | ||||
|  | ||||
| // Extract a single rotated vector | ||||
| template<class Field> | ||||
| void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  | ||||
| { | ||||
|   typedef decltype(basis[0].View()) View; | ||||
|   typedef typename Field::vector_object vobj; | ||||
|   GridBase* grid = basis[0].Grid(); | ||||
|  | ||||
|   result.Checkerboard() = basis[0].Checkerboard(); | ||||
|   auto result_v=result.View(); | ||||
|   Vector<View> basis_v(basis.size(),result_v); | ||||
|   for(int k=0;k<basis.size();k++){ | ||||
|     basis_v[k] = basis[k].View(); | ||||
|   } | ||||
|   vobj zz=Zero(); | ||||
|   Vector<double> Qt_jv(Nm); | ||||
|   double * Qt_j = & Qt_jv[0]; | ||||
|   for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k); | ||||
|   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{ | ||||
|     auto B=coalescedRead(zz); | ||||
|     for(int k=k0; k<k1; ++k){ | ||||
|       B +=Qt_j[k] * coalescedRead(basis_v[k][ss]); | ||||
|     } | ||||
|     coalescedWrite(result_v[ss], B); | ||||
|   }); | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  | ||||
| { | ||||
|   int vlen = idx.size(); | ||||
|  | ||||
|   assert(vlen>=1); | ||||
|   assert(vlen<=sort_vals.size()); | ||||
|   assert(vlen<=_v.size()); | ||||
|  | ||||
|   for (size_t i=0;i<vlen;i++) { | ||||
|  | ||||
|     if (idx[i] != i) { | ||||
|  | ||||
|       ////////////////////////////////////// | ||||
|       // idx[i] is a table of desired sources giving a permutation. | ||||
|       // Swap v[i] with v[idx[i]]. | ||||
|       // Find  j>i for which _vnew[j] = _vold[i], | ||||
|       // track the move idx[j] => idx[i] | ||||
|       // track the move idx[i] => i | ||||
|       ////////////////////////////////////// | ||||
|       size_t j; | ||||
|       for (j=i;j<idx.size();j++) | ||||
| 	if (idx[j]==i) | ||||
| 	  break; | ||||
|  | ||||
|       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); | ||||
|  | ||||
|       swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy | ||||
|       std::swap(sort_vals[i],sort_vals[idx[i]]); | ||||
|  | ||||
|       idx[j] = idx[i]; | ||||
|       idx[i] = i; | ||||
|     } | ||||
|   } | ||||
| } | ||||
|  | ||||
| inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  | ||||
| { | ||||
|   std::vector<int> idx(sort_vals.size()); | ||||
|   std::iota(idx.begin(), idx.end(), 0); | ||||
|  | ||||
|   // sort indexes based on comparing values in v | ||||
|   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { | ||||
|     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); | ||||
|   }); | ||||
|   return idx; | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  | ||||
| { | ||||
|   std::vector<int> idx = basisSortGetIndex(sort_vals); | ||||
|   if (reverse) | ||||
|     std::reverse(idx.begin(), idx.end()); | ||||
|    | ||||
|   basisReorderInPlace(_v,sort_vals,idx); | ||||
| } | ||||
|  | ||||
| // PAB: faster to compute the inner products first then fuse loops. | ||||
| // If performance critical can improve. | ||||
| template<class Field> | ||||
| void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) { | ||||
|   result = Zero(); | ||||
|   assert(_v.size()==eval.size()); | ||||
|   int N = (int)_v.size(); | ||||
|   for (int i=0;i<N;i++) { | ||||
|     Field& tmp = _v[i]; | ||||
|     axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result); | ||||
|   } | ||||
| } | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Implicitly restarted lanczos | ||||
| ///////////////////////////////////////////////////////////// | ||||
|   | ||||
| @@ -44,6 +44,7 @@ public: | ||||
| 				  int, MinRes);    // Must restart | ||||
| }; | ||||
|  | ||||
| //This class is the input parameter class for some testing programs | ||||
| struct LocalCoherenceLanczosParams : Serializable { | ||||
| public: | ||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(LocalCoherenceLanczosParams, | ||||
| @@ -67,6 +68,7 @@ public: | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class ProjectedHermOp : public LinearFunction<Lattice<iVector<CComplex,nbasis > > > { | ||||
| public: | ||||
|   using LinearFunction<Lattice<iVector<CComplex,nbasis > > >::operator(); | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<CComplex>   CoarseScalar; // used for inner products on fine field | ||||
| @@ -97,6 +99,7 @@ public: | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class ProjectedFunctionHermOp : public LinearFunction<Lattice<iVector<CComplex,nbasis > > > { | ||||
| public: | ||||
|   using LinearFunction<Lattice<iVector<CComplex,nbasis > > >::operator(); | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<CComplex>   CoarseScalar; // used for inner products on fine field | ||||
| @@ -144,15 +147,23 @@ public: | ||||
|   RealD                             _coarse_relax_tol; | ||||
|   std::vector<FineField>        &_subspace; | ||||
|  | ||||
|   int _largestEvalIdxForReport; //The convergence of the LCL is based on the evals of the coarse grid operator, not those of the underlying fine grid operator | ||||
|                                 //As a result we do not know what the eval range of the fine operator is until the very end, making tuning the Cheby bounds very difficult | ||||
|                                 //To work around this issue, every restart we separately reconstruct the fine operator eval for the lowest and highest evec and print these | ||||
|                                 //out alongside the evals of the coarse operator. To do so we need to know the index of the largest eval (i.e. Nstop-1) | ||||
|                                 //NOTE: If largestEvalIdxForReport=-1 (default) then this is not performed | ||||
|    | ||||
|   ImplicitlyRestartedLanczosSmoothedTester(LinearFunction<CoarseField>   &Poly, | ||||
| 					   OperatorFunction<FineField>   &smoother, | ||||
| 					   LinearOperatorBase<FineField> &Linop, | ||||
| 					   std::vector<FineField>        &subspace, | ||||
| 					   RealD coarse_relax_tol=5.0e3)  | ||||
| 					   RealD coarse_relax_tol=5.0e3, | ||||
| 					   int largestEvalIdxForReport=-1)  | ||||
|     : _smoother(smoother), _Linop(Linop), _Poly(Poly), _subspace(subspace), | ||||
|       _coarse_relax_tol(coarse_relax_tol)   | ||||
|       _coarse_relax_tol(coarse_relax_tol), _largestEvalIdxForReport(largestEvalIdxForReport) | ||||
|   {    }; | ||||
|  | ||||
|   //evalMaxApprox: approximation of largest eval of the fine Chebyshev operator (suitably wrapped by block projection) | ||||
|   int TestConvergence(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox) | ||||
|   { | ||||
|     CoarseField v(B); | ||||
| @@ -175,12 +186,26 @@ public: | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv | ||||
| 	     <<std::endl; | ||||
|  | ||||
|     if(_largestEvalIdxForReport != -1 && (j==0 || j==_largestEvalIdxForReport)){ | ||||
|       std::cout<<GridLogIRL << "Estimating true eval of fine grid operator for eval idx " << j << std::endl; | ||||
|       RealD tmp_eval; | ||||
|       ReconstructEval(j,eresid,B,tmp_eval,1.0); //don't use evalMaxApprox of coarse operator! (cf below) | ||||
|     } | ||||
|      | ||||
|     int conv=0; | ||||
|     if( (vv<eresid*eresid) ) conv = 1; | ||||
|     return conv; | ||||
|   } | ||||
|  | ||||
|   //This function is called at the end of the coarse grid Lanczos. It promotes the coarse eigenvector 'B' to the fine grid, | ||||
|   //applies a smoother to the result then computes the computes the *fine grid* eigenvalue (output as 'eval'). | ||||
|  | ||||
|   //evalMaxApprox should be the approximation of the largest eval of the fine Hermop. However when this function is called by IRL it actually passes the largest eval of the *Chebyshev* operator (as this is the max approx used for the TestConvergence above) | ||||
|   //As the largest eval of the Chebyshev is typically several orders of magnitude larger this makes the convergence test pass even when it should not. | ||||
|   //We therefore ignore evalMaxApprox here and use a value of 1.0 (note this value is already used by TestCoarse) | ||||
|   int ReconstructEval(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox)   | ||||
|   { | ||||
|     evalMaxApprox = 1.0; //cf above | ||||
|     GridBase *FineGrid = _subspace[0].Grid();     | ||||
|     int checkerboard   = _subspace[0].Checkerboard(); | ||||
|     FineField fB(FineGrid);fB.Checkerboard() =checkerboard; | ||||
| @@ -199,13 +224,13 @@ public: | ||||
|     eval   = vnum/vden; | ||||
|     fv -= eval*fB; | ||||
|     RealD vv = norm2(fv) / ::pow(evalMaxApprox,2.0); | ||||
|     if ( j > nbasis ) eresid = eresid*_coarse_relax_tol; | ||||
|      | ||||
|     std::cout.precision(13); | ||||
|     std::cout<<GridLogIRL  << "[" << std::setw(3)<<j<<"] " | ||||
| 	     <<"eval = "<<std::setw(25)<< eval << " (" << eval_poly << ")" | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv << " target " << eresid*eresid | ||||
| 	     <<std::endl; | ||||
|     if ( j > nbasis ) eresid = eresid*_coarse_relax_tol; | ||||
|     if( (vv<eresid*eresid) ) return 1; | ||||
|     return 0; | ||||
|   } | ||||
| @@ -283,6 +308,10 @@ public: | ||||
|     evals_coarse.resize(0); | ||||
|   }; | ||||
|  | ||||
|   //The block inner product is the inner product on the fine grid locally summed over the blocks | ||||
|   //to give a Lattice<Scalar> on the coarse grid. This function orthnormalizes the fine-grid subspace | ||||
|   //vectors under the block inner product. This step must be performed after computing the fine grid | ||||
|   //eigenvectors and before computing the coarse grid eigenvectors.     | ||||
|   void Orthogonalise(void ) { | ||||
|     CoarseScalar InnerProd(_CoarseGrid); | ||||
|     std::cout << GridLogMessage <<" Gramm-Schmidt pass 1"<<std::endl; | ||||
| @@ -326,6 +355,8 @@ public: | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   //While this method serves to check the coarse eigenvectors, it also recomputes the eigenvalues from the smoothed reconstructed eigenvectors | ||||
|   //hence the smoother can be tuned after running the coarse Lanczos by using a different smoother here | ||||
|   void testCoarse(RealD resid,ChebyParams cheby_smooth,RealD relax)  | ||||
|   { | ||||
|     assert(evals_fine.size() == nbasis); | ||||
| @@ -374,25 +405,31 @@ public: | ||||
|     evals_fine.resize(nbasis); | ||||
|     subspace.resize(nbasis,_FineGrid); | ||||
|   } | ||||
|  | ||||
|  | ||||
|   //cheby_op: Parameters of the fine grid Chebyshev polynomial used for the Lanczos acceleration | ||||
|   //cheby_smooth: Parameters of a separate Chebyshev polynomial used after the Lanczos has completed to smooth out high frequency noise in the reconstructed fine grid eigenvectors prior to computing the eigenvalue | ||||
|   //relax: Reconstructed eigenvectors (post smoothing) are naturally not as precise as true eigenvectors. This factor acts as a multiplier on the stopping condition when determining whether the results satisfy the user provided stopping condition | ||||
|   void calcCoarse(ChebyParams cheby_op,ChebyParams cheby_smooth,RealD relax, | ||||
| 		  int Nstop, int Nk, int Nm,RealD resid,  | ||||
| 		  RealD MaxIt, RealD betastp, int MinRes) | ||||
|   { | ||||
|     Chebyshev<FineField>                          Cheby(cheby_op); | ||||
|     ProjectedHermOp<Fobj,CComplex,nbasis>         Op(_FineOp,subspace); | ||||
|     ProjectedFunctionHermOp<Fobj,CComplex,nbasis> ChebyOp (Cheby,_FineOp,subspace); | ||||
|     Chebyshev<FineField>                          Cheby(cheby_op); //Chebyshev of fine operator on fine grid | ||||
|     ProjectedHermOp<Fobj,CComplex,nbasis>         Op(_FineOp,subspace); //Fine operator on coarse grid with intermediate fine grid conversion | ||||
|     ProjectedFunctionHermOp<Fobj,CComplex,nbasis> ChebyOp (Cheby,_FineOp,subspace); //Chebyshev of fine operator on coarse grid with intermediate fine grid conversion | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // create a smoother and see if we can get a cheap convergence test and smooth inside the IRL | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
|     Chebyshev<FineField>                                           ChebySmooth(cheby_smooth); | ||||
|     ImplicitlyRestartedLanczosSmoothedTester<Fobj,CComplex,nbasis> ChebySmoothTester(ChebyOp,ChebySmooth,_FineOp,subspace,relax); | ||||
|     Chebyshev<FineField>                                           ChebySmooth(cheby_smooth); //lower order Chebyshev of fine operator on fine grid used to smooth regenerated eigenvectors | ||||
|     ImplicitlyRestartedLanczosSmoothedTester<Fobj,CComplex,nbasis> ChebySmoothTester(ChebyOp,ChebySmooth,_FineOp,subspace,relax,Nstop-1);  | ||||
|  | ||||
|     evals_coarse.resize(Nm); | ||||
|     evec_coarse.resize(Nm,_CoarseGrid); | ||||
|  | ||||
|     CoarseField src(_CoarseGrid);     src=1.0;  | ||||
|  | ||||
|     //Note the "tester" here is also responsible for generating the fine grid eigenvalues which are output into the "evals_coarse" array | ||||
|     ImplicitlyRestartedLanczos<CoarseField> IRL(ChebyOp,ChebyOp,ChebySmoothTester,Nstop,Nk,Nm,resid,MaxIt,betastp,MinRes); | ||||
|     int Nconv=0; | ||||
|     IRL.calc(evals_coarse,evec_coarse,src,Nconv,false); | ||||
| @@ -403,6 +440,14 @@ public: | ||||
|       std::cout << i << " Coarse eval = " << evals_coarse[i]  << std::endl; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   //Get the fine eigenvector 'i' by reconstruction | ||||
|   void getFineEvecEval(FineField &evec, RealD &eval, const int i) const{ | ||||
|     blockPromote(evec_coarse[i],evec,subspace);   | ||||
|     eval = evals_coarse[i]; | ||||
|   } | ||||
|      | ||||
|      | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|   | ||||
| @@ -30,6 +30,8 @@ template<class Field> class PowerMethod | ||||
|       RealD vden = norm2(src_n);  | ||||
|       RealD na = vnum/vden;  | ||||
|  | ||||
|       std::cout << GridLogIterative << "PowerMethod: Current approximation of largest eigenvalue " << na << std::endl; | ||||
|        | ||||
|       if ( (fabs(evalMaxApprox/na - 1.0) < 0.001) || (i==_MAX_ITER_EST_-1) ) {  | ||||
|  	evalMaxApprox = na;  | ||||
| 	std::cout << GridLogMessage << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | ||||
|   | ||||
| @@ -43,7 +43,7 @@ NAMESPACE_BEGIN(Grid); | ||||
| template<class Field> | ||||
| class PrecGeneralisedConjugateResidual : public LinearFunction<Field> { | ||||
| public:                                                 | ||||
|  | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|   | ||||
| @@ -0,0 +1,242 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_PREC_GCR_NON_HERM_H | ||||
| #define GRID_PREC_GCR_NON_HERM_H | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| //VPGCR Abe and Zhang, 2005. | ||||
| //INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING | ||||
| //Computing and Information Volume 2, Number 2, Pages 147-161 | ||||
| //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||
| //    but VPGCR was nicely written up in their paper | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||
|  | ||||
| template<class Field> | ||||
| class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> { | ||||
| public:                                                 | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|   int mmax; | ||||
|   int nstep; | ||||
|   int steps; | ||||
|   int level; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch MatTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|  | ||||
|   LinearFunction<Field>     &Preconditioner; | ||||
|   LinearOperatorBase<Field> &Linop; | ||||
|  | ||||
|   void Level(int lv) { level=lv; }; | ||||
|  | ||||
|   PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||
|     Tolerance(tol),  | ||||
|     MaxIterations(maxit), | ||||
|     Linop(_Linop), | ||||
|     Preconditioner(Prec), | ||||
|     mmax(_mmax), | ||||
|     nstep(_nstep) | ||||
|   {  | ||||
|     level=1; | ||||
|     verbose=1; | ||||
|   }; | ||||
|  | ||||
|   void operator() (const Field &src, Field &psi){ | ||||
|  | ||||
|     psi=Zero(); | ||||
|     RealD cp, ssq,rsq; | ||||
|     ssq=norm2(src); | ||||
|     rsq=Tolerance*Tolerance*ssq; | ||||
|        | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     steps=0; | ||||
|     for(int k=0;k<MaxIterations;k++){ | ||||
|  | ||||
|       cp=GCRnStep(src,psi,rsq); | ||||
|  | ||||
|       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||
|  | ||||
|       if(cp<rsq) { | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	Linop.Op(psi,r); | ||||
| 	axpy(r,-1.0,src,r); | ||||
| 	RealD tr = norm2(r); | ||||
| 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||
| 		 << " computed residual "<<sqrt(cp/ssq) | ||||
| 		 << " true residual "    <<sqrt(tr/ssq) | ||||
| 		 << " target "           <<Tolerance <<std::endl; | ||||
|  | ||||
| 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||
|     //    assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||
|  | ||||
|     RealD cp; | ||||
|     ComplexD a, b; | ||||
|     //    ComplexD zAz; | ||||
|     RealD zAAz; | ||||
|     ComplexD rq; | ||||
|  | ||||
|     GridBase *grid = src.Grid(); | ||||
|  | ||||
|     Field r(grid); | ||||
|     Field z(grid); | ||||
|     Field tmp(grid); | ||||
|     Field ttmp(grid); | ||||
|     Field Az(grid); | ||||
|  | ||||
|     //////////////////////////////// | ||||
|     // history for flexible orthog | ||||
|     //////////////////////////////// | ||||
|     std::vector<Field> q(mmax,grid); | ||||
|     std::vector<Field> p(mmax,grid); | ||||
|     std::vector<RealD> qq(mmax); | ||||
|        | ||||
|     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // initial guess x0 is taken as nonzero. | ||||
|     // r0=src-A x0 = src | ||||
|     ////////////////////////////////// | ||||
|     MatTimer.Start(); | ||||
|     Linop.Op(psi,Az); | ||||
|     //    zAz = innerProduct(Az,psi); | ||||
|     zAAz= norm2(Az); | ||||
|     MatTimer.Stop(); | ||||
|      | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r=src-Az; | ||||
|     LinalgTimer.Stop(); | ||||
|     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||
|      | ||||
|     ///////////////////// | ||||
|     // p = Prec(r) | ||||
|     ///////////////////// | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(r,z); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     MatTimer.Start(); | ||||
|     Linop.Op(z,Az); | ||||
|     MatTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|  | ||||
|     //    zAz = innerProduct(Az,psi); | ||||
|     zAAz= norm2(Az); | ||||
|  | ||||
|     //p[0],q[0],qq[0]  | ||||
|     p[0]= z; | ||||
|     q[0]= Az; | ||||
|     qq[0]= zAAz; | ||||
|      | ||||
|     cp =norm2(r); | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for(int k=0;k<nstep;k++){ | ||||
|  | ||||
|       steps++; | ||||
|  | ||||
|       int kp     = k+1; | ||||
|       int peri_k = k %mmax; | ||||
|       int peri_kp= kp%mmax; | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|       rq= innerProduct(q[peri_k],r); // what if rAr not real? | ||||
|       a = rq/qq[peri_k]; | ||||
|  | ||||
|       axpy(psi,a,p[peri_k],psi);          | ||||
|  | ||||
|       cp = axpy_norm(r,-a,q[peri_k],r); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||
|  | ||||
|       if((k==nstep-1)||(cp<rsq)){ | ||||
| 	return cp; | ||||
|       } | ||||
|  | ||||
|  | ||||
|       PrecTimer.Start(); | ||||
|       Preconditioner(r,z);// solve Az = r | ||||
|       PrecTimer.Stop(); | ||||
|  | ||||
|       MatTimer.Start(); | ||||
|       Linop.Op(z,Az); | ||||
|       MatTimer.Stop(); | ||||
|       //      zAz = innerProduct(Az,psi); | ||||
|       zAAz= norm2(Az); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       q[peri_kp]=Az; | ||||
|       p[peri_kp]=z; | ||||
|  | ||||
|       int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history. | ||||
|       for(int back=0;back<northog;back++){ | ||||
|  | ||||
| 	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0); | ||||
|  | ||||
| 	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back]; | ||||
| 	p[peri_kp]=p[peri_kp]+b*p[peri_back]; | ||||
| 	q[peri_kp]=q[peri_kp]+b*q[peri_back]; | ||||
|  | ||||
|       } | ||||
|       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||
|       LinalgTimer.Stop(); | ||||
|     } | ||||
|     assert(0); // never reached | ||||
|     return cp; | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -132,6 +132,31 @@ namespace Grid { | ||||
|       (*this)(_Matrix,in,out,guess); | ||||
|     } | ||||
|  | ||||
|     void RedBlackSource(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &src_o)  | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       Field tmp(grid); | ||||
|       int nblock = in.size(); | ||||
|       for(int b=0;b<nblock;b++){ | ||||
| 	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||
|       } | ||||
|     } | ||||
|     // James can write his own deflated guesser | ||||
|     // with optimised code for the inner products | ||||
|     //    RedBlackSolveSplitGrid(); | ||||
|     //    RedBlackSolve(_Matrix,src_o,sol_o);  | ||||
|  | ||||
|     void RedBlackSolution(Matrix &_Matrix, const std::vector<Field> &in, const std::vector<Field> &sol_o, std::vector<Field> &out) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       Field tmp(grid); | ||||
|       int nblock = in.size(); | ||||
|       for(int b=0;b<nblock;b++) { | ||||
| 	pickCheckerboard(Even,tmp,in[b]); | ||||
| 	RedBlackSolution(_Matrix,sol_o[b],tmp,out[b]); | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     template<class Guesser> | ||||
|     void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out,Guesser &guess)  | ||||
|     { | ||||
| @@ -150,22 +175,27 @@ namespace Grid { | ||||
|       //////////////////////////////////////////////// | ||||
|       // Prepare RedBlack source | ||||
|       //////////////////////////////////////////////// | ||||
|       for(int b=0;b<nblock;b++){ | ||||
| 	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||
|       } | ||||
|       RedBlackSource(_Matrix,in,src_o); | ||||
| 	//      for(int b=0;b<nblock;b++){ | ||||
| 	//	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||
| 	//      } | ||||
|        | ||||
|       //////////////////////////////////////////////// | ||||
|       // Make the guesses | ||||
|       //////////////////////////////////////////////// | ||||
|       if ( subGuess ) guess_save.resize(nblock,grid); | ||||
|  | ||||
|       for(int b=0;b<nblock;b++){ | ||||
|        | ||||
|       if(useSolnAsInitGuess) { | ||||
|         for(int b=0;b<nblock;b++){ | ||||
|           pickCheckerboard(Odd, sol_o[b], out[b]); | ||||
|         } | ||||
|       } else { | ||||
|           guess(src_o[b],sol_o[b]);  | ||||
|         guess(src_o, sol_o);  | ||||
|       } | ||||
|  | ||||
| 	    if ( subGuess ) {  | ||||
|         for(int b=0;b<nblock;b++){ | ||||
|           guess_save[b] = sol_o[b]; | ||||
|         } | ||||
|       } | ||||
| @@ -405,6 +435,70 @@ namespace Grid { | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field>  | ||||
|   { | ||||
|     public: | ||||
|       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|       NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||
|           const bool _solnAsInitGuess = false)   | ||||
|       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||
|  | ||||
|       ////////////////////////////////////////////////////// | ||||
|       // Override RedBlack specialisation | ||||
|       ////////////////////////////////////////////////////// | ||||
|       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field  tmp(grid); | ||||
|         Field Mtmp(grid); | ||||
|  | ||||
|         pickCheckerboard(Even, src_e, src); | ||||
|         pickCheckerboard(Odd , src_o, src); | ||||
|  | ||||
|         ///////////////////////////////////////////////////// | ||||
|         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|         ///////////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||
|         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||
|         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||
|       } | ||||
|        | ||||
|       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field     tmp(grid); | ||||
|         Field   sol_e(grid); | ||||
|         Field src_e_i(grid); | ||||
|          | ||||
|         /////////////////////////////////////////////////// | ||||
|         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|         /////////////////////////////////////////////////// | ||||
|         _Matrix.Meooe(sol_o, tmp);         assert(     tmp.Checkerboard() == Even ); | ||||
|         src_e_i = src_e - tmp;             assert( src_e_i.Checkerboard() == Even ); | ||||
|         _Matrix.MooeeInv(src_e_i, sol_e);  assert(   sol_e.Checkerboard() == Even ); | ||||
|         | ||||
|         setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even ); | ||||
|         setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd  ); | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  assert(sol_o.Checkerboard() == Odd); | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||
|       } | ||||
|   }; | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Site diagonal is identity, right preconditioned by Mee^inv | ||||
|   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta | ||||
| @@ -482,5 +576,76 @@ namespace Grid { | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field>  | ||||
|   { | ||||
|     public: | ||||
|       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // Wrap the usual normal equations Schur trick | ||||
|       ///////////////////////////////////////////////////// | ||||
|       NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||
|           const bool _solnAsInitGuess = false)   | ||||
|       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||
|  | ||||
|       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field  tmp(grid); | ||||
|         Field Mtmp(grid); | ||||
|  | ||||
|         pickCheckerboard(Even, src_e, src); | ||||
|         pickCheckerboard(Odd , src_o, src); | ||||
|        | ||||
|         ///////////////////////////////////////////////////// | ||||
|         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|         ///////////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||
|         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||
|         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field sol_o_i(grid); | ||||
|         Field     tmp(grid); | ||||
|         Field   sol_e(grid); | ||||
|  | ||||
|         //////////////////////////////////////////////// | ||||
|         // MooeeInv due to pecond | ||||
|         //////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(sol_o, tmp); | ||||
|         sol_o_i = tmp; | ||||
|  | ||||
|         /////////////////////////////////////////////////// | ||||
|         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|         /////////////////////////////////////////////////// | ||||
|         _Matrix.Meooe(sol_o_i, tmp);    assert(   tmp.Checkerboard() == Even ); | ||||
|         tmp = src_e - tmp;              assert( src_e.Checkerboard() == Even ); | ||||
|         _Matrix.MooeeInv(tmp, sol_e);   assert( sol_e.Checkerboard() == Even ); | ||||
|         | ||||
|         setCheckerboard(sol, sol_e);    assert(   sol_e.Checkerboard() == Even ); | ||||
|         setCheckerboard(sol, sol_o_i);  assert( sol_o_i.Checkerboard() == Odd  ); | ||||
|       }; | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o); | ||||
|       }; | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o,  std::vector<Field>& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||
|       } | ||||
|   }; | ||||
| } | ||||
|  | ||||
| #endif | ||||
|   | ||||
| @@ -26,118 +26,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_ALIGNED_ALLOCATOR_H | ||||
| #define GRID_ALIGNED_ALLOCATOR_H | ||||
|  | ||||
| #ifdef HAVE_MALLOC_MALLOC_H | ||||
| #include <malloc/malloc.h> | ||||
| #endif | ||||
| #ifdef HAVE_MALLOC_H | ||||
| #include <malloc.h> | ||||
| #endif | ||||
|  | ||||
| #ifdef HAVE_MM_MALLOC_H | ||||
| #include <mm_malloc.h> | ||||
| #endif | ||||
|  | ||||
| #define POINTER_CACHE | ||||
| #define GRID_ALLOC_ALIGN (2*1024*1024) | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Move control to configure.ac and Config.h? | ||||
| #ifdef POINTER_CACHE | ||||
| class PointerCache { | ||||
| private: | ||||
| /*Pinning pages is costly*/ | ||||
| /*Could maintain separate large and small allocation caches*/ | ||||
| #ifdef GRID_NVCC  | ||||
|   static const int Ncache=128; | ||||
| #else | ||||
|   static const int Ncache=8; | ||||
| #endif | ||||
|   static int victim; | ||||
|  | ||||
|   typedef struct {  | ||||
|     void *address; | ||||
|     size_t bytes; | ||||
|     int valid; | ||||
|   } PointerCacheEntry; | ||||
|      | ||||
|   static PointerCacheEntry Entries[Ncache]; | ||||
|  | ||||
| public: | ||||
|  | ||||
|   static void *Insert(void *ptr,size_t bytes) ; | ||||
|   static void *Lookup(size_t bytes) ; | ||||
|  | ||||
| }; | ||||
| #endif   | ||||
|  | ||||
| std::string sizeString(size_t bytes); | ||||
|  | ||||
| struct MemoryStats | ||||
| { | ||||
|   size_t totalAllocated{0}, maxAllocated{0},  | ||||
|     currentlyAllocated{0}, totalFreed{0}; | ||||
| }; | ||||
|      | ||||
| class MemoryProfiler | ||||
| { | ||||
| public: | ||||
|   static MemoryStats *stats; | ||||
|   static bool        debug; | ||||
| }; | ||||
|  | ||||
| #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" | ||||
| #define profilerDebugPrint						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ | ||||
|       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ | ||||
| 		<< std::endl;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerAllocate(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalAllocated     += (bytes);					\ | ||||
|       s->currentlyAllocated += (bytes);					\ | ||||
|       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerFree(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalFreed         += (bytes);					\ | ||||
|       s->currentlyAllocated -= (bytes);					\ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| void check_huge_pages(void *Buf,uint64_t BYTES); | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| // A lattice of something, but assume the something is SIMDized. | ||||
| //////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| template<typename _Tp> | ||||
| class alignedAllocator { | ||||
| public:  | ||||
| @@ -161,89 +53,131 @@ public: | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|  | ||||
|  | ||||
| #ifdef POINTER_CACHE | ||||
|     _Tp *ptr = (_Tp *) PointerCache::Lookup(bytes); | ||||
| #else | ||||
|     pointer ptr = nullptr; | ||||
| #endif | ||||
|  | ||||
| #ifdef GRID_NVCC | ||||
|     //////////////////////////////////// | ||||
|     // Unified (managed) memory | ||||
|     //////////////////////////////////// | ||||
|     if ( ptr == (_Tp *) NULL ) { | ||||
|       //      printf(" alignedAllocater cache miss %ld bytes ",bytes);      BACKTRACEFP(stdout); | ||||
|       auto err = cudaMallocManaged((void **)&ptr,bytes); | ||||
|       if( err != cudaSuccess ) { | ||||
| 	ptr = (_Tp *) NULL; | ||||
| 	std::cerr << " cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl; | ||||
| 	assert(0); | ||||
|       } | ||||
|     }  | ||||
|     assert( ptr != (_Tp *)NULL); | ||||
| #else  | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // 2MB align; could make option probably doesn't need configurability | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   #ifdef HAVE_MM_MALLOC_H | ||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) _mm_malloc(bytes,GRID_ALLOC_ALIGN); | ||||
|   #else | ||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN,bytes); | ||||
|   #endif | ||||
|     assert( ptr != (_Tp *)NULL); | ||||
|  | ||||
|     ////////////////////////////////////////////////// | ||||
|     // First touch optimise in threaded loop  | ||||
|     ////////////////////////////////////////////////// | ||||
|     uint64_t *cp = (uint64_t *)ptr; | ||||
|     thread_for(n,bytes/sizeof(uint64_t), { // need only one touch per page | ||||
|       cp[n]=0; | ||||
|     }); | ||||
| #endif | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes); | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n) {  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|  | ||||
|     profilerFree(bytes); | ||||
|  | ||||
| #ifdef POINTER_CACHE | ||||
|     pointer __freeme = (pointer)PointerCache::Insert((void *)__p,bytes); | ||||
| #else  | ||||
|     pointer __freeme = __p; | ||||
| #endif | ||||
|  | ||||
| #ifdef GRID_NVCC | ||||
|     if ( __freeme ) cudaFree((void *)__freeme); | ||||
| #else  | ||||
|   #ifdef HAVE_MM_MALLOC_H | ||||
|     if ( __freeme ) _mm_free((void *)__freeme);  | ||||
|   #else | ||||
|     if ( __freeme ) free((void *)__freeme); | ||||
|   #endif | ||||
| #endif | ||||
|     MemoryManager::CpuFree((void *)__p,bytes); | ||||
|   } | ||||
|  | ||||
|   // FIXME: hack for the copy constructor, eventually it must be avoided | ||||
|   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; | ||||
|   //void construct(pointer __p, const _Tp& __val) { }; | ||||
|   // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop | ||||
|   void construct(pointer __p, const _Tp& __val) { assert(0);}; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Unified virtual memory | ||||
| ////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<typename _Tp> | ||||
| class uvmAllocator { | ||||
| public:  | ||||
|   typedef std::size_t     size_type; | ||||
|   typedef std::ptrdiff_t  difference_type; | ||||
|   typedef _Tp*       pointer; | ||||
|   typedef const _Tp* const_pointer; | ||||
|   typedef _Tp&       reference; | ||||
|   typedef const _Tp& const_reference; | ||||
|   typedef _Tp        value_type; | ||||
|  | ||||
|   template<typename _Tp1>  struct rebind { typedef uvmAllocator<_Tp1> other; }; | ||||
|   uvmAllocator() throw() { } | ||||
|   uvmAllocator(const uvmAllocator&) throw() { } | ||||
|   template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { } | ||||
|   ~uvmAllocator() throw() { } | ||||
|   pointer       address(reference __x)       const { return &__x; } | ||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||
|  | ||||
|   pointer allocate(size_type __n, const void* _p= 0) | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes); | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|     profilerFree(bytes); | ||||
|     MemoryManager::SharedFree((void *)__p,bytes); | ||||
|   } | ||||
|  | ||||
|   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Device memory | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| template<typename _Tp> | ||||
| class devAllocator { | ||||
| public:  | ||||
|   typedef std::size_t     size_type; | ||||
|   typedef std::ptrdiff_t  difference_type; | ||||
|   typedef _Tp*       pointer; | ||||
|   typedef const _Tp* const_pointer; | ||||
|   typedef _Tp&       reference; | ||||
|   typedef const _Tp& const_reference; | ||||
|   typedef _Tp        value_type; | ||||
|  | ||||
|   template<typename _Tp1>  struct rebind { typedef devAllocator<_Tp1> other; }; | ||||
|   devAllocator() throw() { } | ||||
|   devAllocator(const devAllocator&) throw() { } | ||||
|   template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { } | ||||
|   ~devAllocator() throw() { } | ||||
|   pointer       address(reference __x)       const { return &__x; } | ||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||
|  | ||||
|   pointer allocate(size_type __n, const void* _p= 0) | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes); | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|     profilerFree(bytes); | ||||
|     MemoryManager::AcceleratorFree((void *)__p,bytes); | ||||
|   } | ||||
|   void construct(pointer __p, const _Tp& __val) { }; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Template typedefs | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| template<class T> using commAllocator = alignedAllocator<T>; | ||||
| template<class T> using Vector     = std::vector<T,alignedAllocator<T> >;            | ||||
| template<class T> using commVector = std::vector<T,alignedAllocator<T> >; | ||||
| template<class T> using Matrix     = std::vector<std::vector<T,alignedAllocator<T> > >; | ||||
| #ifdef ACCELERATOR_CSHIFT | ||||
| // Cshift on device | ||||
| template<class T> using cshiftAllocator = devAllocator<T>; | ||||
| #else | ||||
| // Cshift on host | ||||
| template<class T> using cshiftAllocator = std::allocator<T>; | ||||
| #endif | ||||
|  | ||||
| template<class T> using Vector        = std::vector<T,uvmAllocator<T> >;            | ||||
| template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;            | ||||
| template<class T> using commVector = std::vector<T,devAllocator<T> >; | ||||
| template<class T> using cshiftVector = std::vector<T,cshiftAllocator<T> >; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
|  | ||||
|   | ||||
							
								
								
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | ||||
| #pragma once | ||||
| #include <Grid/allocator/MemoryStats.h> | ||||
| #include <Grid/allocator/MemoryManager.h> | ||||
| #include <Grid/allocator/AlignedAllocator.h> | ||||
							
								
								
									
										324
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										324
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,324 @@ | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| /*Allocation types, saying which pointer cache should be used*/ | ||||
| #define Cpu      (0) | ||||
| #define CpuHuge  (1) | ||||
| #define CpuSmall (2) | ||||
| #define Acc      (3) | ||||
| #define AccHuge  (4) | ||||
| #define AccSmall (5) | ||||
| #define Shared   (6) | ||||
| #define SharedHuge  (7) | ||||
| #define SharedSmall (8) | ||||
| #undef GRID_MM_VERBOSE  | ||||
| uint64_t total_shared; | ||||
| uint64_t total_device; | ||||
| uint64_t total_host;; | ||||
| void MemoryManager::PrintBytes(void) | ||||
| { | ||||
|   std::cout << " MemoryManager : ------------------------------------ "<<std::endl; | ||||
|   std::cout << " MemoryManager : PrintBytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : ------------------------------------ "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_shared>>20)<<" shared      Mbytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_device>>20)<<" accelerator Mbytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_host>>20)  <<" cpu         Mbytes "<<std::endl; | ||||
|   uint64_t cacheBytes; | ||||
|   cacheBytes = CacheBytes[Cpu]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" cpu cache Mbytes "<<std::endl; | ||||
|   cacheBytes = CacheBytes[Acc]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" acc cache Mbytes "<<std::endl; | ||||
|   cacheBytes = CacheBytes[Shared]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" shared cache Mbytes "<<std::endl; | ||||
|    | ||||
| #ifdef GRID_CUDA | ||||
|   cuda_mem(); | ||||
| #endif | ||||
|    | ||||
| } | ||||
|  | ||||
| uint64_t MemoryManager::DeviceCacheBytes() { return CacheBytes[Acc] + CacheBytes[AccHuge] + CacheBytes[AccSmall]; } | ||||
| uint64_t MemoryManager::HostCacheBytes()   { return CacheBytes[Cpu] + CacheBytes[CpuHuge] + CacheBytes[CpuSmall]; } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| // Data tables for recently freed pooiniter caches | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax]; | ||||
| int MemoryManager::Victim[MemoryManager::NallocType]; | ||||
| int MemoryManager::Ncache[MemoryManager::NallocType] = { 2, 0, 8, 8, 0, 16, 8, 0, 16 }; | ||||
| uint64_t MemoryManager::CacheBytes[MemoryManager::NallocType]; | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| // Actual allocation and deallocation utils | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| void *MemoryManager::AcceleratorAllocate(size_t bytes) | ||||
| { | ||||
|   total_device+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Acc); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocDevice(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"AcceleratorAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::AcceleratorFree    (void *ptr,size_t bytes) | ||||
| { | ||||
|   total_device-=bytes; | ||||
|   void *__freeme = Insert(ptr,bytes,Acc); | ||||
|   if ( __freeme ) { | ||||
|     acceleratorFreeDevice(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"AcceleratorFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| void *MemoryManager::SharedAllocate(size_t bytes) | ||||
| { | ||||
|   total_shared+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Shared); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocShared(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"SharedAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::SharedFree    (void *ptr,size_t bytes) | ||||
| { | ||||
|   total_shared-=bytes; | ||||
|   void *__freeme = Insert(ptr,bytes,Shared); | ||||
|   if ( __freeme ) { | ||||
|     acceleratorFreeShared(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"SharedFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #ifdef GRID_UVM | ||||
| void *MemoryManager::CpuAllocate(size_t bytes) | ||||
| { | ||||
|   total_host+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Cpu); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocShared(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||
| { | ||||
|   total_host-=bytes; | ||||
|   NotifyDeletion(_ptr); | ||||
|   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||
|   if ( __freeme ) {  | ||||
|     acceleratorFreeShared(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #else | ||||
| void *MemoryManager::CpuAllocate(size_t bytes) | ||||
| { | ||||
|   total_host+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Cpu); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocCpu(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||
| { | ||||
|   total_host-=bytes; | ||||
|   NotifyDeletion(_ptr); | ||||
|   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||
|   if ( __freeme ) {  | ||||
|     acceleratorFreeCpu(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #endif | ||||
|  | ||||
| ////////////////////////////////////////// | ||||
| // call only once | ||||
| ////////////////////////////////////////// | ||||
| void MemoryManager::Init(void) | ||||
| { | ||||
|  | ||||
|   char * str; | ||||
|   int Nc; | ||||
|    | ||||
|   str= getenv("GRID_ALLOC_NCACHE_LARGE"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[Cpu]=Nc; | ||||
|       Ncache[Acc]=Nc; | ||||
|       Ncache[Shared]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   str= getenv("GRID_ALLOC_NCACHE_HUGE"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[CpuHuge]=Nc; | ||||
|       Ncache[AccHuge]=Nc; | ||||
|       Ncache[SharedHuge]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   str= getenv("GRID_ALLOC_NCACHE_SMALL"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[CpuSmall]=Nc; | ||||
|       Ncache[AccSmall]=Nc; | ||||
|       Ncache[SharedSmall]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
| } | ||||
|  | ||||
| void MemoryManager::InitMessage(void) { | ||||
|  | ||||
| #ifndef GRID_UVM | ||||
|   std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl; | ||||
| #endif | ||||
|    | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl; | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent host   allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<" HUGE "<<Ncache[CpuHuge]<<std::endl; | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent device allocations: SMALL "<<Ncache[AccSmall]<<" LARGE "<<Ncache[Acc]<<" Huge "<<Ncache[AccHuge]<<std::endl; | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent shared allocations: SMALL "<<Ncache[SharedSmall]<<" LARGE "<<Ncache[Shared]<<" Huge "<<Ncache[SharedHuge]<<std::endl; | ||||
| #endif | ||||
|    | ||||
| #ifdef GRID_UVM | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl; | ||||
| #ifdef GRID_CUDA | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl; | ||||
| #endif | ||||
| #else | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl; | ||||
| #ifdef GRID_CUDA | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl; | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Insert(void *ptr,size_t bytes,int type)  | ||||
| { | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   int cache; | ||||
|   if      (bytes < GRID_ALLOC_SMALL_LIMIT) cache = type + 2; | ||||
|   else if (bytes >= GRID_ALLOC_HUGE_LIMIT) cache = type + 1; | ||||
|   else                                     cache = type; | ||||
|  | ||||
|   return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache],CacheBytes[cache]);   | ||||
| #else | ||||
|   return ptr; | ||||
| #endif | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim, uint64_t &cacheBytes)  | ||||
| { | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
|  | ||||
|   if (ncache == 0) return ptr; | ||||
|  | ||||
|   void * ret = NULL; | ||||
|   int v = -1; | ||||
|  | ||||
|   for(int e=0;e<ncache;e++) { | ||||
|     if ( entries[e].valid==0 ) { | ||||
|       v=e;  | ||||
|       break; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   if ( v==-1 ) { | ||||
|     v=victim; | ||||
|     victim = (victim+1)%ncache; | ||||
|   } | ||||
|  | ||||
|   if ( entries[v].valid ) { | ||||
|     ret = entries[v].address; | ||||
|     cacheBytes -= entries[v].bytes; | ||||
|     entries[v].valid = 0; | ||||
|     entries[v].address = NULL; | ||||
|     entries[v].bytes = 0; | ||||
|   } | ||||
|  | ||||
|   entries[v].address=ptr; | ||||
|   entries[v].bytes  =bytes; | ||||
|   entries[v].valid  =1; | ||||
|   cacheBytes += bytes; | ||||
|  | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Lookup(size_t bytes,int type) | ||||
| { | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   int cache; | ||||
|   if      (bytes < GRID_ALLOC_SMALL_LIMIT) cache = type + 2; | ||||
|   else if (bytes >= GRID_ALLOC_HUGE_LIMIT) cache = type + 1; | ||||
|   else                                     cache = type; | ||||
|  | ||||
|   return Lookup(bytes,Entries[cache],Ncache[cache],CacheBytes[cache]); | ||||
| #else | ||||
|   return NULL; | ||||
| #endif | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache,uint64_t & cacheBytes)  | ||||
| { | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
|   for(int e=0;e<ncache;e++){ | ||||
|     if ( entries[e].valid && ( entries[e].bytes == bytes ) ) { | ||||
|       entries[e].valid = 0; | ||||
|       cacheBytes -= entries[e].bytes; | ||||
|       return entries[e].address; | ||||
|     } | ||||
|   } | ||||
|   return NULL; | ||||
| } | ||||
|  | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										226
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
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								Grid/allocator/MemoryManager.h
									
									
									
									
									
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							| @@ -0,0 +1,226 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/MemoryManager.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
| #include <list>  | ||||
| #include <unordered_map>   | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Move control to configure.ac and Config.h? | ||||
|  | ||||
| #define GRID_ALLOC_SMALL_LIMIT (4096) | ||||
| #define GRID_ALLOC_HUGE_LIMIT  (2147483648) | ||||
|  | ||||
| #define STRINGIFY(x) #x | ||||
| #define TOSTRING(x) STRINGIFY(x) | ||||
| #define FILE_LINE __FILE__ ":" TOSTRING(__LINE__) | ||||
| #define AUDIT(a) MemoryManager::Audit(FILE_LINE) | ||||
|  | ||||
| /*Pinning pages is costly*/ | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Advise the LatticeAccelerator class | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| enum ViewAdvise { | ||||
|  AdviseDefault       = 0x0,    // Regular data | ||||
|  AdviseInfrequentUse = 0x1     // Advise that the data is used infrequently.  This can | ||||
|                                // significantly influence performance of bulk storage. | ||||
|   | ||||
|  // AdviseTransient      = 0x2,   // Data will mostly be read.  On some architectures | ||||
|                                // enables read-only copies of memory to be kept on | ||||
|                                // host and device. | ||||
|  | ||||
|  // AdviseAcceleratorWriteDiscard = 0x4  // Field will be written in entirety on device | ||||
|  | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // View Access Mode | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| enum ViewMode { | ||||
|   AcceleratorRead  = 0x01, | ||||
|   AcceleratorWrite = 0x02, | ||||
|   AcceleratorWriteDiscard = 0x04, | ||||
|   CpuRead  = 0x08, | ||||
|   CpuWrite = 0x10, | ||||
|   CpuWriteDiscard = 0x10 // same for now | ||||
| }; | ||||
|  | ||||
| struct MemoryStatus { | ||||
|   uint64_t     DeviceBytes; | ||||
|   uint64_t     DeviceLRUBytes; | ||||
|   uint64_t     DeviceMaxBytes; | ||||
|   uint64_t     HostToDeviceBytes; | ||||
|   uint64_t     DeviceToHostBytes; | ||||
|   uint64_t     HostToDeviceXfer; | ||||
|   uint64_t     DeviceToHostXfer; | ||||
|   uint64_t     DeviceEvictions; | ||||
|   uint64_t     DeviceDestroy; | ||||
|   uint64_t     DeviceAllocCacheBytes; | ||||
|   uint64_t     HostAllocCacheBytes; | ||||
| }; | ||||
|  | ||||
|  | ||||
| class MemoryManager { | ||||
| private: | ||||
|  | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   // For caching recently freed allocations | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   typedef struct {  | ||||
|     void *address; | ||||
|     size_t bytes; | ||||
|     int valid; | ||||
|   } AllocationCacheEntry; | ||||
|  | ||||
|   static const int NallocCacheMax=128;  | ||||
|   static const int NallocType=9; | ||||
|   static AllocationCacheEntry Entries[NallocType][NallocCacheMax]; | ||||
|   static int Victim[NallocType]; | ||||
|   static int Ncache[NallocType]; | ||||
|   static uint64_t CacheBytes[NallocType]; | ||||
|  | ||||
|   ///////////////////////////////////////////////// | ||||
|   // Free pool | ||||
|   ///////////////////////////////////////////////// | ||||
|   static void *Insert(void *ptr,size_t bytes,int type) ; | ||||
|   static void *Lookup(size_t bytes,int type) ; | ||||
|   static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim,uint64_t &cbytes) ; | ||||
|   static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache,uint64_t &cbytes) ; | ||||
|  | ||||
|  public: | ||||
|   static void PrintBytes(void); | ||||
|   static void Audit(std::string s); | ||||
|   static void Init(void); | ||||
|   static void InitMessage(void); | ||||
|   static void *AcceleratorAllocate(size_t bytes); | ||||
|   static void  AcceleratorFree    (void *ptr,size_t bytes); | ||||
|   static void *SharedAllocate(size_t bytes); | ||||
|   static void  SharedFree    (void *ptr,size_t bytes); | ||||
|   static void *CpuAllocate(size_t bytes); | ||||
|   static void  CpuFree    (void *ptr,size_t bytes); | ||||
|  | ||||
|   //////////////////////////////////////////////////////// | ||||
|   // Footprint tracking | ||||
|   //////////////////////////////////////////////////////// | ||||
|   static uint64_t     DeviceBytes; | ||||
|   static uint64_t     DeviceLRUBytes; | ||||
|   static uint64_t     DeviceMaxBytes; | ||||
|   static uint64_t     HostToDeviceBytes; | ||||
|   static uint64_t     DeviceToHostBytes; | ||||
|   static uint64_t     HostToDeviceXfer; | ||||
|   static uint64_t     DeviceToHostXfer; | ||||
|   static uint64_t     DeviceEvictions; | ||||
|   static uint64_t     DeviceDestroy; | ||||
|    | ||||
|   static uint64_t     DeviceCacheBytes(); | ||||
|   static uint64_t     HostCacheBytes(); | ||||
|  | ||||
|   static MemoryStatus GetFootprint(void) { | ||||
|     MemoryStatus stat; | ||||
|     stat.DeviceBytes       = DeviceBytes; | ||||
|     stat.DeviceLRUBytes    = DeviceLRUBytes; | ||||
|     stat.DeviceMaxBytes    = DeviceMaxBytes; | ||||
|     stat.HostToDeviceBytes = HostToDeviceBytes; | ||||
|     stat.DeviceToHostBytes = DeviceToHostBytes; | ||||
|     stat.HostToDeviceXfer  = HostToDeviceXfer; | ||||
|     stat.DeviceToHostXfer  = DeviceToHostXfer; | ||||
|     stat.DeviceEvictions   = DeviceEvictions; | ||||
|     stat.DeviceDestroy     = DeviceDestroy; | ||||
|     stat.DeviceAllocCacheBytes = DeviceCacheBytes(); | ||||
|     stat.HostAllocCacheBytes   = HostCacheBytes(); | ||||
|     return stat; | ||||
|   }; | ||||
|    | ||||
|  private: | ||||
| #ifndef GRID_UVM | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   // Data tables for ViewCache | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   typedef std::list<uint64_t> LRU_t; | ||||
|   typedef typename LRU_t::iterator LRUiterator; | ||||
|   typedef struct {  | ||||
|     int        LRU_valid; | ||||
|     LRUiterator LRU_entry; | ||||
|     uint64_t CpuPtr; | ||||
|     uint64_t AccPtr; | ||||
|     size_t   bytes; | ||||
|     uint32_t transient; | ||||
|     uint32_t state; | ||||
|     uint32_t accLock; | ||||
|     uint32_t cpuLock; | ||||
|   } AcceleratorViewEntry; | ||||
|    | ||||
|   typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t; | ||||
|   typedef typename AccViewTable_t::iterator AccViewTableIterator ; | ||||
|  | ||||
|   static AccViewTable_t AccViewTable; | ||||
|   static LRU_t LRU; | ||||
|  | ||||
|   ///////////////////////////////////////////////// | ||||
|   // Device motion | ||||
|   ///////////////////////////////////////////////// | ||||
|   static void  Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void  EvictVictims(uint64_t bytes); // Frees up <bytes> | ||||
|   static void  Evict(AcceleratorViewEntry &AccCache); | ||||
|   static void  Flush(AcceleratorViewEntry &AccCache); | ||||
|   static void  Clone(AcceleratorViewEntry &AccCache); | ||||
|   static void  AccDiscard(AcceleratorViewEntry &AccCache); | ||||
|   static void  CpuDiscard(AcceleratorViewEntry &AccCache); | ||||
|  | ||||
|   //  static void  LRUupdate(AcceleratorViewEntry &AccCache); | ||||
|   static void  LRUinsert(AcceleratorViewEntry &AccCache); | ||||
|   static void  LRUremove(AcceleratorViewEntry &AccCache); | ||||
|    | ||||
|   // manage entries in the table | ||||
|   static int                  EntryPresent(uint64_t CpuPtr); | ||||
|   static void                 EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void                 EntryErase (uint64_t CpuPtr); | ||||
|   static AccViewTableIterator EntryLookup(uint64_t CpuPtr); | ||||
|   static void                 EntrySet   (uint64_t CpuPtr,AcceleratorViewEntry &entry); | ||||
|  | ||||
|   static void     AcceleratorViewClose(uint64_t AccPtr); | ||||
|   static uint64_t AcceleratorViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void     CpuViewClose(uint64_t Ptr); | ||||
|   static uint64_t CpuViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
| #endif | ||||
|   static void NotifyDeletion(void * CpuPtr); | ||||
|  | ||||
|  public: | ||||
|   static void Print(void); | ||||
|   static void PrintAll(void); | ||||
|   static void PrintState( void* CpuPtr); | ||||
|   static int   isOpen   (void* CpuPtr); | ||||
|   static void  ViewClose(void* CpuPtr,ViewMode mode); | ||||
|   static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|  | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
							
								
								
									
										601
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										601
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,601 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #ifndef GRID_UVM | ||||
|  | ||||
| #warning "Using explicit device memory copies" | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define MAXLINE 512 | ||||
| static char print_buffer [ MAXLINE ]; | ||||
|  | ||||
| #define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer; | ||||
| #define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer; | ||||
| //#define dprintf(...)  | ||||
|  | ||||
|  | ||||
| //////////////////////////////////////////////////////////// | ||||
| // For caching copies of data on device | ||||
| //////////////////////////////////////////////////////////// | ||||
| MemoryManager::AccViewTable_t MemoryManager::AccViewTable; | ||||
| MemoryManager::LRU_t MemoryManager::LRU; | ||||
|    | ||||
| //////////////////////////////////////////////////////// | ||||
| // Footprint tracking | ||||
| //////////////////////////////////////////////////////// | ||||
| uint64_t  MemoryManager::DeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceLRUBytes; | ||||
| uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||
| uint64_t  MemoryManager::HostToDeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceToHostBytes; | ||||
| uint64_t  MemoryManager::HostToDeviceXfer; | ||||
| uint64_t  MemoryManager::DeviceToHostXfer; | ||||
| uint64_t  MemoryManager::DeviceEvictions; | ||||
| uint64_t  MemoryManager::DeviceDestroy; | ||||
|  | ||||
| //////////////////////////////////// | ||||
| // Priority ordering for unlocked entries | ||||
| //  Empty | ||||
| //  CpuDirty  | ||||
| //  Consistent | ||||
| //  AccDirty | ||||
| //////////////////////////////////// | ||||
| #define Empty         (0x0)  /*Entry unoccupied  */ | ||||
| #define CpuDirty      (0x1)  /*CPU copy is golden, Acc buffer MAY not be allocated*/ | ||||
| #define Consistent    (0x2)  /*ACC copy AND CPU copy are valid */ | ||||
| #define AccDirty      (0x4)  /*ACC copy is golden */ | ||||
| #define EvictNext     (0x8)  /*Priority for eviction*/ | ||||
|  | ||||
| ///////////////////////////////////////////////// | ||||
| // Mechanics of data table maintenance | ||||
| ///////////////////////////////////////////////// | ||||
| int   MemoryManager::EntryPresent(uint64_t CpuPtr) | ||||
| { | ||||
|   if(AccViewTable.empty()) return 0; | ||||
|  | ||||
|   auto count = AccViewTable.count(CpuPtr);  assert((count==0)||(count==1)); | ||||
|   return count; | ||||
| } | ||||
| void  MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   assert(!EntryPresent(CpuPtr)); | ||||
|   AcceleratorViewEntry AccCache; | ||||
|   AccCache.CpuPtr = CpuPtr; | ||||
|   AccCache.AccPtr = (uint64_t)NULL; | ||||
|   AccCache.bytes  = bytes; | ||||
|   AccCache.state  = CpuDirty; | ||||
|   AccCache.LRU_valid=0; | ||||
|   AccCache.transient=0; | ||||
|   AccCache.accLock=0; | ||||
|   AccCache.cpuLock=0; | ||||
|   AccViewTable[CpuPtr] = AccCache; | ||||
| } | ||||
| MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr) | ||||
| { | ||||
|   assert(EntryPresent(CpuPtr)); | ||||
|   auto AccCacheIterator = AccViewTable.find(CpuPtr); | ||||
|   assert(AccCacheIterator!=AccViewTable.end()); | ||||
|   return AccCacheIterator; | ||||
| } | ||||
| void MemoryManager::EntryErase(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCache = EntryLookup(CpuPtr); | ||||
|   AccViewTable.erase(CpuPtr); | ||||
| } | ||||
| void  MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.LRU_valid==0); | ||||
|   if (AccCache.transient) {  | ||||
|     LRU.push_back(AccCache.CpuPtr); | ||||
|     AccCache.LRU_entry = --LRU.end(); | ||||
|   } else { | ||||
|     LRU.push_front(AccCache.CpuPtr); | ||||
|     AccCache.LRU_entry = LRU.begin(); | ||||
|   } | ||||
|   AccCache.LRU_valid = 1; | ||||
|   DeviceLRUBytes+=AccCache.bytes; | ||||
| } | ||||
| void  MemoryManager::LRUremove(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.LRU_valid==1); | ||||
|   LRU.erase(AccCache.LRU_entry); | ||||
|   AccCache.LRU_valid = 0; | ||||
|   DeviceLRUBytes-=AccCache.bytes; | ||||
| } | ||||
| ///////////////////////////////////////////////// | ||||
| // Accelerator cache motion & consistency logic | ||||
| ///////////////////////////////////////////////// | ||||
| void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   /////////////////////////////////////////////////////////// | ||||
|   // Remove from Accelerator, remove entry, without flush | ||||
|   // Cannot be locked. If allocated Must be in LRU pool. | ||||
|   /////////////////////////////////////////////////////////// | ||||
|   assert(AccCache.state!=Empty); | ||||
|    | ||||
|   mprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr) { | ||||
|     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||
|     DeviceDestroy++; | ||||
|     DeviceBytes   -=AccCache.bytes; | ||||
|     LRUremove(AccCache); | ||||
|     AccCache.AccPtr=(uint64_t) NULL; | ||||
|     dprintf("MemoryManager: Free(%lx) LRU %ld Total %ld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);   | ||||
|   } | ||||
|   uint64_t CpuPtr = AccCache.CpuPtr; | ||||
|   EntryErase(CpuPtr); | ||||
| } | ||||
|  | ||||
| void MemoryManager::Evict(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   // Make CPU consistent, remove from Accelerator, remove from LRU, LEAVE CPU only entry | ||||
|   // Cannot be acclocked. If allocated must be in LRU pool. | ||||
|   // | ||||
|   // Nov 2022... Felix issue: Allocating two CpuPtrs, can have an entry in LRU-q with CPUlock. | ||||
|   //                          and require to evict the AccPtr copy. Eviction was a mistake in CpuViewOpen | ||||
|   //                          but there is a weakness where CpuLock entries are attempted for erase | ||||
|   //                          Take these OUT LRU queue when CPU locked? | ||||
|   //                          Cannot take out the table as cpuLock data is important. | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   assert(AccCache.state!=Empty); | ||||
|    | ||||
|   mprintf("MemoryManager: Evict cpu %lx acc %lx cpuLock %ld accLock %ld\n", | ||||
| 	  (uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr, | ||||
| 	  (uint64_t)AccCache.cpuLock,(uint64_t)AccCache.accLock);  | ||||
|   if (AccCache.accLock!=0) return; | ||||
|   if (AccCache.cpuLock!=0) return; | ||||
|   if(AccCache.state==AccDirty) { | ||||
|     Flush(AccCache); | ||||
|   } | ||||
|   if(AccCache.AccPtr) { | ||||
|     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||
|     LRUremove(AccCache); | ||||
|     AccCache.AccPtr=(uint64_t)NULL; | ||||
|     AccCache.state=CpuDirty; // CPU primary now | ||||
|     DeviceBytes   -=AccCache.bytes; | ||||
|     dprintf("MemoryManager: Free(%lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);   | ||||
|   } | ||||
|   //  uint64_t CpuPtr = AccCache.CpuPtr; | ||||
|   DeviceEvictions++; | ||||
|   //  EntryErase(CpuPtr); | ||||
| } | ||||
| void MemoryManager::Flush(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state==AccDirty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.AccPtr!=(uint64_t)NULL); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes); | ||||
|   mprintf("MemoryManager: Flush  %lx -> %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||
|   DeviceToHostBytes+=AccCache.bytes; | ||||
|   DeviceToHostXfer++; | ||||
|   AccCache.state=Consistent; | ||||
| } | ||||
| void MemoryManager::Clone(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state==CpuDirty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||
|     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||
|     DeviceBytes+=AccCache.bytes; | ||||
|   } | ||||
|   mprintf("MemoryManager: Clone %lx <- %lx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||
|   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes); | ||||
|   HostToDeviceBytes+=AccCache.bytes; | ||||
|   HostToDeviceXfer++; | ||||
|   AccCache.state=Consistent; | ||||
| } | ||||
|  | ||||
| void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state!=Empty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||
|     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||
|     DeviceBytes+=AccCache.bytes; | ||||
|   } | ||||
|   AccCache.state=AccDirty; | ||||
| } | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| // View management | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| void MemoryManager::ViewClose(void* Ptr,ViewMode mode) | ||||
| { | ||||
|   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||
|     dprintf("AcceleratorViewClose %lx\n",(uint64_t)Ptr); | ||||
|     AcceleratorViewClose((uint64_t)Ptr); | ||||
|   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||
|     CpuViewClose((uint64_t)Ptr); | ||||
|   } else {  | ||||
|     assert(0); | ||||
|   } | ||||
| } | ||||
| void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||
|     dprintf("AcceleratorViewOpen %lx\n",(uint64_t)CpuPtr); | ||||
|     return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint); | ||||
|   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||
|     return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint); | ||||
|   } else {  | ||||
|     assert(0); | ||||
|     return NULL; | ||||
|   } | ||||
| } | ||||
| void  MemoryManager::EvictVictims(uint64_t bytes) | ||||
| { | ||||
|   assert(bytes<DeviceMaxBytes); | ||||
|   while(bytes+DeviceLRUBytes > DeviceMaxBytes){ | ||||
|     if ( DeviceLRUBytes > 0){ | ||||
|       assert(LRU.size()>0); | ||||
|       uint64_t victim = LRU.back(); // From the LRU | ||||
|       auto AccCacheIterator = EntryLookup(victim); | ||||
|       auto & AccCache = AccCacheIterator->second; | ||||
|       Evict(AccCache); | ||||
|     } else { | ||||
|       return; | ||||
|     } | ||||
|   } | ||||
| } | ||||
| uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   // Find if present, otherwise get or force an empty | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   if ( EntryPresent(CpuPtr)==0 ){ | ||||
|     EntryCreate(CpuPtr,bytes,mode,hint); | ||||
|   } | ||||
|  | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|   if (!AccCache.AccPtr) { | ||||
|     EvictVictims(bytes);  | ||||
|   }  | ||||
|   assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)); | ||||
|  | ||||
|   assert(AccCache.cpuLock==0);  // Programming error | ||||
|  | ||||
|   if(AccCache.state!=Empty) { | ||||
|     dprintf("ViewOpen found entry %lx %lx : %ld %ld accLock %ld\n", | ||||
| 		    (uint64_t)AccCache.CpuPtr, | ||||
| 		    (uint64_t)CpuPtr, | ||||
| 		    (uint64_t)AccCache.bytes, | ||||
| 	            (uint64_t)bytes, | ||||
| 		    (uint64_t)AccCache.accLock); | ||||
|     assert(AccCache.CpuPtr == CpuPtr); | ||||
|     assert(AccCache.bytes  ==bytes); | ||||
|   } | ||||
| /* | ||||
|  *  State transitions and actions | ||||
|  * | ||||
|  *  Action  State   StateNext         Flush    Clone | ||||
|  * | ||||
|  *  AccRead  Empty   Consistent        -        Y | ||||
|  *  AccWrite Empty   AccDirty          -        Y | ||||
|  *  AccRead  CpuDirty Consistent       -        Y | ||||
|  *  AccWrite CpuDirty AccDirty         -        Y | ||||
|  *  AccRead  Consistent Consistent     -        -  | ||||
|  *  AccWrite Consistent AccDirty       -        -  | ||||
|  *  AccRead  AccDirty   AccDirty       -        -  | ||||
|  *  AccWrite AccDirty   AccDirty       -        -  | ||||
|  */ | ||||
|   if(AccCache.state==Empty) { | ||||
|     assert(AccCache.LRU_valid==0); | ||||
|     AccCache.CpuPtr = CpuPtr; | ||||
|     AccCache.AccPtr = (uint64_t)NULL; | ||||
|     AccCache.bytes  = bytes; | ||||
|     AccCache.state  = CpuDirty;   // Cpu starts primary | ||||
|     if(mode==AcceleratorWriteDiscard){ | ||||
|       CpuDiscard(AccCache); | ||||
|       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||
|     } else if(mode==AcceleratorWrite){ | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||
|     } else { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = Consistent; // Empty + AccRead => Consistent | ||||
|     } | ||||
|     AccCache.accLock= 1; | ||||
|     dprintf("Copied Empty entry into device accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==CpuDirty ){ | ||||
|     if(mode==AcceleratorWriteDiscard) { | ||||
|       CpuDiscard(AccCache); | ||||
|       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||
|     } else if(mode==AcceleratorWrite) { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||
|     } else { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent | ||||
|     } | ||||
|     AccCache.accLock++; | ||||
|     dprintf("CpuDirty entry into device ++accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==Consistent) { | ||||
|     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||
|       AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty | ||||
|     else | ||||
|       AccCache.state  = Consistent; // Consistent + AccRead => Consistent | ||||
|     AccCache.accLock++; | ||||
|     dprintf("Consistent entry into device ++accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==AccDirty) { | ||||
|     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||
|       AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty | ||||
|     else | ||||
|       AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty | ||||
|     AccCache.accLock++; | ||||
|     dprintf("AccDirty entry ++accLock= %d\n",AccCache.accLock); | ||||
|   } else { | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
|   assert(AccCache.accLock>0); | ||||
|   // If view is opened on device must remove from LRU | ||||
|   if(AccCache.LRU_valid==1){ | ||||
|     // must possibly remove from LRU as now locked on GPU | ||||
|     dprintf("AccCache entry removed from LRU \n"); | ||||
|     LRUremove(AccCache); | ||||
|   } | ||||
|  | ||||
|   int transient =hint; | ||||
|   AccCache.transient= transient? EvictNext : 0; | ||||
|  | ||||
|   return AccCache.AccPtr; | ||||
| } | ||||
| //////////////////////////////////// | ||||
| // look up & decrement lock count | ||||
| //////////////////////////////////// | ||||
| void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock>0); | ||||
|  | ||||
|   AccCache.accLock--; | ||||
|   // Move to LRU queue if not locked and close on device | ||||
|   if(AccCache.accLock==0) { | ||||
|     dprintf("AccleratorViewClose %lx AccLock decremented to %ld move to LRU queue\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock); | ||||
|     LRUinsert(AccCache); | ||||
|   } else { | ||||
|     dprintf("AccleratorViewClose %lx AccLock decremented to %ld\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock); | ||||
|   } | ||||
| } | ||||
| void MemoryManager::CpuViewClose(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   assert(AccCache.cpuLock>0); | ||||
|   assert(AccCache.accLock==0); | ||||
|  | ||||
|   AccCache.cpuLock--; | ||||
| } | ||||
| /* | ||||
|  *  Action  State   StateNext         Flush    Clone | ||||
|  * | ||||
|  *  CpuRead  Empty   CpuDirty          -        - | ||||
|  *  CpuWrite Empty   CpuDirty          -        - | ||||
|  *  CpuRead  CpuDirty CpuDirty         -        - | ||||
|  *  CpuWrite CpuDirty CpuDirty         -        -  | ||||
|  *  CpuRead  Consistent Consistent     -        -  | ||||
|  *  CpuWrite Consistent CpuDirty       -        -  | ||||
|  *  CpuRead  AccDirty   Consistent     Y        - | ||||
|  *  CpuWrite AccDirty   CpuDirty       Y        - | ||||
|  */ | ||||
| uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   // Find if present, otherwise get or force an empty | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   if ( EntryPresent(CpuPtr)==0 ){ | ||||
|     EntryCreate(CpuPtr,bytes,mode,transient); | ||||
|   } | ||||
|  | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   // CPU doesn't need to free space | ||||
|   //  if (!AccCache.AccPtr) { | ||||
|   //    EvictVictims(bytes); | ||||
|   //  } | ||||
|  | ||||
|   assert((mode==CpuRead)||(mode==CpuWrite)); | ||||
|   assert(AccCache.accLock==0);  // Programming error | ||||
|  | ||||
|   if(AccCache.state!=Empty) { | ||||
|     assert(AccCache.CpuPtr == CpuPtr); | ||||
|     assert(AccCache.bytes==bytes); | ||||
|   } | ||||
|  | ||||
|   if(AccCache.state==Empty) { | ||||
|     AccCache.CpuPtr = CpuPtr; | ||||
|     AccCache.AccPtr = (uint64_t)NULL; | ||||
|     AccCache.bytes  = bytes; | ||||
|     AccCache.state  = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty | ||||
|     AccCache.accLock= 0; | ||||
|     AccCache.cpuLock= 1; | ||||
|   } else if(AccCache.state==CpuDirty ){ | ||||
|     // AccPtr dont care, deferred allocate | ||||
|     AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty | ||||
|     AccCache.cpuLock++; | ||||
|   } else if(AccCache.state==Consistent) { | ||||
|     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||
|     if(mode==CpuWrite) | ||||
|       AccCache.state = CpuDirty;   // Consistent +CpuWrite => CpuDirty | ||||
|     else  | ||||
|       AccCache.state = Consistent; // Consistent +CpuRead  => Consistent | ||||
|     AccCache.cpuLock++; | ||||
|   } else if(AccCache.state==AccDirty) { | ||||
|     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||
|     Flush(AccCache); | ||||
|     if(mode==CpuWrite) AccCache.state = CpuDirty;   // AccDirty +CpuWrite => CpuDirty, Flush | ||||
|     else            AccCache.state = Consistent; // AccDirty +CpuRead  => Consistent, Flush | ||||
|     AccCache.cpuLock++; | ||||
|   } else { | ||||
|     assert(0); // should be unreachable | ||||
|   } | ||||
|  | ||||
|   AccCache.transient= transient? EvictNext : 0; | ||||
|  | ||||
|   return AccCache.CpuPtr; | ||||
| } | ||||
| void  MemoryManager::NotifyDeletion(void *_ptr) | ||||
| { | ||||
|   // Look up in ViewCache | ||||
|   uint64_t ptr = (uint64_t)_ptr; | ||||
|   if(EntryPresent(ptr)) { | ||||
|     auto e = EntryLookup(ptr); | ||||
|     AccDiscard(e->second); | ||||
|   } | ||||
| } | ||||
| void  MemoryManager::Print(void) | ||||
| { | ||||
|   PrintBytes(); | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << "Memory Manager                             " << std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceBytes   << " bytes allocated on device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceLRUBytes<< " bytes evictable on device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceMaxBytes<< " bytes max on device       " << std::endl; | ||||
|   std::cout << GridLogMessage << HostToDeviceXfer << " transfers        to   device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceToHostXfer << " transfers        from device " << std::endl; | ||||
|   std::cout << GridLogMessage << HostToDeviceBytes<< " bytes transfered to   device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceToHostBytes<< " bytes transfered from device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceEvictions  << " Evictions from device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceDestroy    << " Destroyed vectors on device " << std::endl; | ||||
|   std::cout << GridLogMessage << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
| } | ||||
| void  MemoryManager::PrintAll(void) | ||||
| { | ||||
|   Print(); | ||||
|   std::cout << GridLogMessage << std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||
|     auto &AccCache = it->second; | ||||
|      | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|  | ||||
|     std::cout << GridLogMessage << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
| 	      << "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
| 	      << "\t" << AccCache.cpuLock | ||||
| 	      << "\t" << AccCache.accLock | ||||
| 	      << "\t" << AccCache.LRU_valid<<std::endl; | ||||
|   } | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|  | ||||
| }; | ||||
| int   MemoryManager::isOpen   (void* _CpuPtr)  | ||||
| {  | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|   if ( EntryPresent(CpuPtr) ){ | ||||
|     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     return AccCache.cpuLock+AccCache.accLock; | ||||
|   } else {  | ||||
|     return 0; | ||||
|   } | ||||
| } | ||||
| void MemoryManager::Audit(std::string s) | ||||
| { | ||||
|   uint64_t CpuBytes=0; | ||||
|   uint64_t AccBytes=0; | ||||
|   uint64_t LruBytes1=0; | ||||
|   uint64_t LruBytes2=0; | ||||
|   uint64_t LruCnt=0; | ||||
|    | ||||
|   std::cout << " Memory Manager::Audit() from "<<s<<std::endl; | ||||
|   for(auto it=LRU.begin();it!=LRU.end();it++){ | ||||
|     uint64_t cpuPtr = *it; | ||||
|     assert(EntryPresent(cpuPtr)); | ||||
|     auto AccCacheIterator = EntryLookup(cpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     LruBytes2+=AccCache.bytes; | ||||
|     assert(AccCache.LRU_valid==1); | ||||
|     assert(AccCache.LRU_entry==it); | ||||
|   } | ||||
|   std::cout << " Memory Manager::Audit() LRU queue matches table entries "<<std::endl; | ||||
|  | ||||
|   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||
|     auto &AccCache = it->second; | ||||
|      | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|  | ||||
|     CpuBytes+=AccCache.bytes; | ||||
|     if( AccCache.AccPtr )    AccBytes+=AccCache.bytes; | ||||
|     if( AccCache.LRU_valid ) LruBytes1+=AccCache.bytes; | ||||
|     if( AccCache.LRU_valid ) LruCnt++; | ||||
|      | ||||
|     if ( AccCache.cpuLock || AccCache.accLock ) { | ||||
|       assert(AccCache.LRU_valid==0); | ||||
|  | ||||
|       std::cout << GridLogError << s<< "\n\t 0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
| 		<< "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
| 		<< "\t cpuLock  " << AccCache.cpuLock | ||||
| 		<< "\t accLock  " << AccCache.accLock | ||||
| 		<< "\t LRUvalid " << AccCache.LRU_valid<<std::endl; | ||||
|     } | ||||
|  | ||||
|     assert( AccCache.cpuLock== 0 ) ; | ||||
|     assert( AccCache.accLock== 0 ) ; | ||||
|   } | ||||
|   std::cout << " Memory Manager::Audit() no locked table entries "<<std::endl; | ||||
|   assert(LruBytes1==LruBytes2); | ||||
|   assert(LruBytes1==DeviceLRUBytes); | ||||
|   std::cout << " Memory Manager::Audit() evictable bytes matches sum over table "<<std::endl; | ||||
|   assert(AccBytes==DeviceBytes); | ||||
|   std::cout << " Memory Manager::Audit() device bytes matches sum over table "<<std::endl; | ||||
|   assert(LruCnt == LRU.size()); | ||||
|   std::cout << " Memory Manager::Audit() LRU entry count matches "<<std::endl; | ||||
|  | ||||
| } | ||||
|  | ||||
| void MemoryManager::PrintState(void* _CpuPtr) | ||||
| { | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|  | ||||
|   if ( EntryPresent(CpuPtr) ){ | ||||
|     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|     if ( AccCache.state==EvictNext) str = std::string("EvictNext"); | ||||
|  | ||||
|     std::cout << GridLogMessage << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||
|     std::cout << GridLogMessage << "\tx"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
|     << "\tx"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
|     << "\t" << AccCache.cpuLock | ||||
|     << "\t" << AccCache.accLock | ||||
|     << "\t" << AccCache.LRU_valid<<std::endl; | ||||
|  | ||||
|   } else { | ||||
|     std::cout << GridLogMessage << "No Entry in AccCache table." << std::endl;  | ||||
|   } | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										31
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										31
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,31 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #ifdef GRID_UVM | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| // View management is 1:1 address space mapping | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| uint64_t  MemoryManager::DeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceLRUBytes; | ||||
| uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||
| uint64_t  MemoryManager::HostToDeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceToHostBytes; | ||||
| uint64_t  MemoryManager::HostToDeviceXfer; | ||||
| uint64_t  MemoryManager::DeviceToHostXfer; | ||||
| uint64_t  MemoryManager::DeviceEvictions; | ||||
| uint64_t  MemoryManager::DeviceDestroy; | ||||
|  | ||||
| void  MemoryManager::Audit(std::string s){}; | ||||
| void  MemoryManager::ViewClose(void* AccPtr,ViewMode mode){}; | ||||
| void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; }; | ||||
| int   MemoryManager::isOpen   (void* CpuPtr) { return 0;} | ||||
| void  MemoryManager::PrintState(void* CpuPtr) | ||||
| { | ||||
| std::cout << GridLogMessage << "Host<->Device memory movement not currently managed by Grid." << std::endl; | ||||
| }; | ||||
| void  MemoryManager::Print(void){}; | ||||
| void  MemoryManager::PrintAll(void){}; | ||||
| void  MemoryManager::NotifyDeletion(void *ptr){}; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -6,72 +6,6 @@ NAMESPACE_BEGIN(Grid); | ||||
| MemoryStats *MemoryProfiler::stats = nullptr; | ||||
| bool         MemoryProfiler::debug = false; | ||||
| 
 | ||||
| #ifdef GRID_NVCC | ||||
| #define SMALL_LIMIT (0) | ||||
| #else | ||||
| #define SMALL_LIMIT (4096) | ||||
| #endif | ||||
| 
 | ||||
| #ifdef POINTER_CACHE | ||||
| int PointerCache::victim; | ||||
| 
 | ||||
| PointerCache::PointerCacheEntry PointerCache::Entries[PointerCache::Ncache]; | ||||
| 
 | ||||
| void *PointerCache::Insert(void *ptr,size_t bytes) { | ||||
| 
 | ||||
|   if (bytes < SMALL_LIMIT ) return ptr; | ||||
| 
 | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
| 
 | ||||
|   void * ret = NULL; | ||||
|   int v = -1; | ||||
| 
 | ||||
|   for(int e=0;e<Ncache;e++) { | ||||
|     if ( Entries[e].valid==0 ) { | ||||
|       v=e;  | ||||
|       break; | ||||
|     } | ||||
|   } | ||||
| 
 | ||||
|   if ( v==-1 ) { | ||||
|     v=victim; | ||||
|     victim = (victim+1)%Ncache; | ||||
|   } | ||||
| 
 | ||||
|   if ( Entries[v].valid ) { | ||||
|     ret = Entries[v].address; | ||||
|     Entries[v].valid = 0; | ||||
|     Entries[v].address = NULL; | ||||
|     Entries[v].bytes = 0; | ||||
|   } | ||||
| 
 | ||||
|   Entries[v].address=ptr; | ||||
|   Entries[v].bytes  =bytes; | ||||
|   Entries[v].valid  =1; | ||||
| 
 | ||||
|   return ret; | ||||
| } | ||||
| 
 | ||||
| void *PointerCache::Lookup(size_t bytes) { | ||||
| 
 | ||||
|   if (bytes < SMALL_LIMIT ) return NULL; | ||||
| 
 | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
| 
 | ||||
|   for(int e=0;e<Ncache;e++){ | ||||
|     if ( Entries[e].valid && ( Entries[e].bytes == bytes ) ) { | ||||
|       Entries[e].valid = 0; | ||||
|       return Entries[e].address; | ||||
|     } | ||||
|   } | ||||
|   return NULL; | ||||
| } | ||||
| #endif | ||||
| 
 | ||||
| void check_huge_pages(void *Buf,uint64_t BYTES) | ||||
| { | ||||
| #ifdef __linux__ | ||||
							
								
								
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,95 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/MemoryStats.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| std::string sizeString(size_t bytes); | ||||
|  | ||||
| struct MemoryStats | ||||
| { | ||||
|   size_t totalAllocated{0}, maxAllocated{0},  | ||||
|     currentlyAllocated{0}, totalFreed{0}; | ||||
| }; | ||||
|      | ||||
| class MemoryProfiler | ||||
| { | ||||
| public: | ||||
|   static MemoryStats *stats; | ||||
|   static bool        debug; | ||||
| }; | ||||
|  | ||||
| #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" | ||||
| #define profilerDebugPrint						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ | ||||
|       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ | ||||
| 		<< std::endl;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerAllocate(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalAllocated     += (bytes);					\ | ||||
|       s->currentlyAllocated += (bytes);					\ | ||||
|       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerFree(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalFreed         += (bytes);					\ | ||||
|       s->currentlyAllocated -= (bytes);					\ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| void check_huge_pages(void *Buf,uint64_t BYTES); | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| @@ -81,6 +81,7 @@ public: | ||||
|  | ||||
|   bool _isCheckerBoarded;  | ||||
|   int        LocallyPeriodic; | ||||
|   Coordinate _checker_dim_mask; | ||||
|  | ||||
| public: | ||||
|  | ||||
|   | ||||
| @@ -38,6 +38,7 @@ class GridCartesian: public GridBase { | ||||
|  | ||||
| public: | ||||
|   int dummy; | ||||
|   Coordinate _checker_dim_mask; | ||||
|   virtual int  CheckerBoardFromOindexTable (int Oindex) { | ||||
|     return 0; | ||||
|   } | ||||
| @@ -104,6 +105,7 @@ public: | ||||
|     _ldimensions.resize(_ndimension); | ||||
|     _rdimensions.resize(_ndimension); | ||||
|     _simd_layout.resize(_ndimension); | ||||
|     _checker_dim_mask.resize(_ndimension);; | ||||
|     _lstart.resize(_ndimension); | ||||
|     _lend.resize(_ndimension); | ||||
|  | ||||
| @@ -114,6 +116,8 @@ public: | ||||
|  | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
| 	_checker_dim_mask[d]=0; | ||||
|  | ||||
|         _fdimensions[d] = dimensions[d];   // Global dimensions | ||||
|         _gdimensions[d] = _fdimensions[d]; // Global dimensions | ||||
|         _simd_layout[d] = simd_layout[d]; | ||||
|   | ||||
| @@ -36,11 +36,27 @@ static const int CbBlack=1; | ||||
| static const int Even   =CbRed; | ||||
| static const int Odd    =CbBlack; | ||||
|  | ||||
| accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex,const Coordinate &rdim,const Coordinate &chk_dim_msk) | ||||
| { | ||||
|   int nd=rdim.size(); | ||||
|   Coordinate coor(nd); | ||||
|  | ||||
|   Lexicographic::CoorFromIndex(coor,oindex,rdim); | ||||
|  | ||||
|   int linear=0; | ||||
|   for(int d=0;d<nd;d++){ | ||||
|     if(chk_dim_msk[d]) | ||||
|       linear=linear+coor[d]; | ||||
|   } | ||||
|   return (linear&0x1); | ||||
| } | ||||
|  | ||||
|      | ||||
| // Specialise this for red black grids storing half the data like a chess board. | ||||
| class GridRedBlackCartesian : public GridBase | ||||
| { | ||||
| public: | ||||
|   Coordinate _checker_dim_mask; | ||||
|   //  Coordinate _checker_dim_mask; | ||||
|   int              _checker_dim; | ||||
|   std::vector<int> _checker_board; | ||||
|  | ||||
|   | ||||
| @@ -33,6 +33,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| bool Stencil_force_mpi = true; | ||||
|  | ||||
| /////////////////////////////////////////////////////////////// | ||||
| // Info that is setup once and indept of cartesian layout | ||||
| /////////////////////////////////////////////////////////////// | ||||
|   | ||||
| @@ -1,4 +1,3 @@ | ||||
|  | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| @@ -36,6 +35,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| extern bool Stencil_force_mpi ; | ||||
|  | ||||
| class CartesianCommunicator : public SharedMemory { | ||||
|  | ||||
| public:     | ||||
| @@ -52,10 +53,11 @@ public: | ||||
|   // Communicator should know nothing of the physics grid, only processor grid. | ||||
|   //////////////////////////////////////////// | ||||
|   int              _Nprocessors;     // How many in all | ||||
|   Coordinate _processors;      // Which dimensions get relayed out over processors lanes. | ||||
|   int              _processor;       // linear processor rank | ||||
|   Coordinate _processor_coor;  // linear processor coordinate | ||||
|   unsigned long    _ndimension; | ||||
|   Coordinate _shm_processors;  // Which dimensions get relayed out over processors lanes. | ||||
|   Coordinate _processors;      // Which dimensions get relayed out over processors lanes. | ||||
|   Coordinate _processor_coor;  // linear processor coordinate | ||||
|   static Grid_MPI_Comm      communicator_world; | ||||
|   Grid_MPI_Comm             communicator; | ||||
|   std::vector<Grid_MPI_Comm> communicator_halo; | ||||
| @@ -96,6 +98,7 @@ public: | ||||
|   int                      BossRank(void)          ; | ||||
|   int                      ThisRank(void)          ; | ||||
|   const Coordinate & ThisProcessorCoor(void) ; | ||||
|   const Coordinate & ShmGrid(void)  { return _shm_processors; }  ; | ||||
|   const Coordinate & ProcessorGrid(void)     ; | ||||
|   int                ProcessorCount(void)    ; | ||||
|  | ||||
| @@ -104,16 +107,20 @@ public: | ||||
|   //////////////////////////////////////////////////////////////////////////////// | ||||
|   static int  RankWorld(void) ; | ||||
|   static void BroadcastWorld(int root,void* data, int bytes); | ||||
|   static void BarrierWorld(void); | ||||
|    | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   // Reduction | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   void GlobalMax(RealD &); | ||||
|   void GlobalMax(RealF &); | ||||
|   void GlobalSum(RealF &); | ||||
|   void GlobalSumVector(RealF *,int N); | ||||
|   void GlobalSum(RealD &); | ||||
|   void GlobalSumVector(RealD *,int N); | ||||
|   void GlobalSum(uint32_t &); | ||||
|   void GlobalSum(uint64_t &); | ||||
|   void GlobalSumVector(uint64_t*,int N); | ||||
|   void GlobalSum(ComplexF &c); | ||||
|   void GlobalSumVector(ComplexF *c,int N); | ||||
|   void GlobalSum(ComplexD &c); | ||||
| @@ -124,7 +131,7 @@ public: | ||||
|   template<class obj> void GlobalSum(obj &o){ | ||||
|     typedef typename obj::scalar_type scalar_type; | ||||
|     int words = sizeof(obj)/sizeof(scalar_type); | ||||
|     scalar_type * ptr = (scalar_type *)& o; | ||||
|     scalar_type * ptr = (scalar_type *)& o; // Safe alias  | ||||
|     GlobalSumVector(ptr,words); | ||||
|   } | ||||
|    | ||||
| @@ -137,33 +144,18 @@ public: | ||||
| 		      int recv_from_rank, | ||||
| 		      int bytes); | ||||
|    | ||||
|   void SendRecvPacket(void *xmit, | ||||
| 		      void *recv, | ||||
| 		      int xmit_to_rank, | ||||
| 		      int recv_from_rank, | ||||
| 		      int bytes); | ||||
|    | ||||
|   void SendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 			   void *xmit, | ||||
| 			   int xmit_to_rank, | ||||
| 			   void *recv, | ||||
| 			   int recv_from_rank, | ||||
| 			   int bytes); | ||||
|    | ||||
|   void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall); | ||||
|  | ||||
|   double StencilSendToRecvFrom(void *xmit, | ||||
| 			       int xmit_to_rank, | ||||
| 			       int xmit_to_rank,int do_xmit, | ||||
| 			       void *recv, | ||||
| 			       int recv_from_rank, | ||||
| 			       int recv_from_rank,int do_recv, | ||||
| 			       int bytes,int dir); | ||||
|  | ||||
|   double StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 				    void *xmit, | ||||
| 				    int xmit_to_rank, | ||||
| 				    int xmit_to_rank,int do_xmit, | ||||
| 				    void *recv, | ||||
| 				    int recv_from_rank, | ||||
| 				    int bytes,int dir); | ||||
| 				    int recv_from_rank,int do_recv, | ||||
| 				    int xbytes,int rbytes,int dir); | ||||
|    | ||||
|    | ||||
|   void StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int i); | ||||
|   | ||||
| @@ -43,8 +43,16 @@ void CartesianCommunicator::Init(int *argc, char ***argv) | ||||
|  | ||||
|   MPI_Initialized(&flag); // needed to coexist with other libs apparently | ||||
|   if ( !flag ) { | ||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); | ||||
|  | ||||
| #ifndef GRID_COMMS_THREADS | ||||
|     nCommThreads=1; | ||||
|     // wrong results here too | ||||
|     // For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs | ||||
|     // other comms schemes are ok | ||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided); | ||||
| #else | ||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); | ||||
| #endif | ||||
|     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE | ||||
|     if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) { | ||||
|       assert(0); | ||||
| @@ -98,7 +106,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||
|   // Remap using the shared memory optimising routine | ||||
|   // The remap creates a comm which must be freed | ||||
|   //////////////////////////////////////////////////// | ||||
|   GlobalSharedMemory::OptimalCommunicator    (processors,optimal_comm); | ||||
|   GlobalSharedMemory::OptimalCommunicator    (processors,optimal_comm,_shm_processors); | ||||
|   InitFromMPICommunicator(processors,optimal_comm); | ||||
|   SetCommunicator(optimal_comm); | ||||
|   /////////////////////////////////////////////////// | ||||
| @@ -116,12 +124,13 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const | ||||
|   int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension); | ||||
|   Coordinate parent_processor_coor(_ndimension,0); | ||||
|   Coordinate parent_processors    (_ndimension,1); | ||||
|  | ||||
|   Coordinate shm_processors       (_ndimension,1); | ||||
|   // Can make 5d grid from 4d etc... | ||||
|   int pad = _ndimension-parent_ndimension; | ||||
|   for(int d=0;d<parent_ndimension;d++){ | ||||
|     parent_processor_coor[pad+d]=parent._processor_coor[d]; | ||||
|     parent_processors    [pad+d]=parent._processors[d]; | ||||
|     shm_processors       [pad+d]=parent._shm_processors[d]; | ||||
|   } | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -146,6 +155,7 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const | ||||
|     ccoor[d] = parent_processor_coor[d] % processors[d]; | ||||
|     scoor[d] = parent_processor_coor[d] / processors[d]; | ||||
|     ssize[d] = parent_processors[d]     / processors[d]; | ||||
|     if ( processors[d] < shm_processors[d] ) shm_processors[d] = processors[d]; // subnode splitting. | ||||
|   } | ||||
|  | ||||
|   // rank within subcomm ; srank is rank of subcomm within blocks of subcomms | ||||
| @@ -255,6 +265,10 @@ void CartesianCommunicator::GlobalSum(uint64_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalXOR(uint32_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); | ||||
|   assert(ierr==0); | ||||
| @@ -263,6 +277,16 @@ void CartesianCommunicator::GlobalXOR(uint64_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_BXOR,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalMax(float &f) | ||||
| { | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_MAX,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalMax(double &d) | ||||
| { | ||||
|   int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_MAX,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(float &f){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| @@ -290,78 +314,46 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| 					   int bytes) | ||||
| { | ||||
|   std::vector<CommsRequest_t> reqs(0); | ||||
|   //    unsigned long  xcrc = crc32(0L, Z_NULL, 0); | ||||
|   //    unsigned long  rcrc = crc32(0L, Z_NULL, 0); | ||||
|   //    xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); | ||||
|   SendToRecvFromBegin(reqs,xmit,dest,recv,from,bytes); | ||||
|   SendToRecvFromComplete(reqs); | ||||
|   //    rcrc = crc32(rcrc,(unsigned char *)recv,bytes); | ||||
|   //    printf("proc %d SendToRecvFrom %d bytes %lx %lx\n",_processor,bytes,xcrc,rcrc); | ||||
| } | ||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, | ||||
| 					   void *recv, | ||||
| 					   int sender, | ||||
| 					   int receiver, | ||||
| 					   int bytes) | ||||
| { | ||||
|   MPI_Status stat; | ||||
|   assert(sender != receiver); | ||||
|   int tag = sender; | ||||
|   if ( _processor == sender ) { | ||||
|     MPI_Send(xmit, bytes, MPI_CHAR,receiver,tag,communicator); | ||||
|   } | ||||
|   if ( _processor == receiver ) {  | ||||
|     MPI_Recv(recv, bytes, MPI_CHAR,sender,tag,communicator,&stat); | ||||
|   } | ||||
| } | ||||
| // Basic Halo comms primitive | ||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 						void *xmit, | ||||
| 						int dest, | ||||
| 						void *recv, | ||||
| 						int from, | ||||
| 						int bytes) | ||||
| { | ||||
|   unsigned long  xcrc = crc32(0L, Z_NULL, 0); | ||||
|   unsigned long  rcrc = crc32(0L, Z_NULL, 0); | ||||
|  | ||||
|   int myrank = _processor; | ||||
|   int ierr; | ||||
|  | ||||
|   if ( CommunicatorPolicy == CommunicatorPolicyConcurrent ) {  | ||||
|     MPI_Request xrq; | ||||
|     MPI_Request rrq; | ||||
|   // Enforce no UVM in comms, device or host OK | ||||
|   assert(acceleratorIsCommunicable(xmit)); | ||||
|   assert(acceleratorIsCommunicable(recv)); | ||||
|  | ||||
|     ierr =MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator,&rrq); | ||||
|     ierr|=MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator,&xrq); | ||||
|      | ||||
|     assert(ierr==0); | ||||
|     list.push_back(xrq); | ||||
|     list.push_back(rrq); | ||||
|   } else {  | ||||
|   // Give the CPU to MPI immediately; can use threads to overlap optionally | ||||
|   //  printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes); | ||||
|   ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, | ||||
| 		    recv,bytes,MPI_CHAR,from, from, | ||||
| 		    communicator,MPI_STATUS_IGNORE); | ||||
|   assert(ierr==0); | ||||
|   } | ||||
| } | ||||
|  | ||||
|   //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); | ||||
|   //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes); | ||||
|   //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush | ||||
| } | ||||
| // Basic Halo comms primitive | ||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||
| 						     int dest, | ||||
| 						     int dest, int dox, | ||||
| 						     void *recv, | ||||
| 						     int from, | ||||
| 						     int from, int dor, | ||||
| 						     int bytes,int dir) | ||||
| { | ||||
|   std::vector<CommsRequest_t> list; | ||||
|   double offbytes = StencilSendToRecvFromBegin(list,xmit,dest,recv,from,bytes,dir); | ||||
|   double offbytes = StencilSendToRecvFromBegin(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir); | ||||
|   StencilSendToRecvFromComplete(list,dir); | ||||
|   return offbytes; | ||||
| } | ||||
|  | ||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 							 void *xmit, | ||||
| 							 int dest, | ||||
| 							 int dest,int dox, | ||||
| 							 void *recv, | ||||
| 							 int from, | ||||
| 							 int bytes,int dir) | ||||
| 							 int from,int dor, | ||||
| 							 int xbytes,int rbytes,int dir) | ||||
| { | ||||
|   int ncomm  =communicator_halo.size(); | ||||
|   int commdir=dir%ncomm; | ||||
| @@ -378,36 +370,35 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | ||||
|   assert(from != _processor); | ||||
|   assert(gme  == ShmRank); | ||||
|   double off_node_bytes=0.0; | ||||
|   int tag; | ||||
|  | ||||
|   if ( gfrom ==MPI_UNDEFINED) { | ||||
|     ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator_halo[commdir],&rrq); | ||||
|   if ( dor ) { | ||||
|     if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
|       tag= dir+from*32; | ||||
|       ierr=MPI_Irecv(recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq); | ||||
|       assert(ierr==0); | ||||
|       list.push_back(rrq); | ||||
|     off_node_bytes+=bytes; | ||||
|       off_node_bytes+=rbytes; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   if ( gdest == MPI_UNDEFINED ) { | ||||
|     ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator_halo[commdir],&xrq); | ||||
|   if (dox) { | ||||
|     if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
|       tag= dir+_processor*32; | ||||
|       ierr =MPI_Isend(xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||
|       assert(ierr==0); | ||||
|       list.push_back(xrq); | ||||
|     off_node_bytes+=bytes; | ||||
|       off_node_bytes+=xbytes; | ||||
|     } else { | ||||
|       void *shm = (void *) this->ShmBufferTranslate(dest,recv); | ||||
|       assert(shm!=NULL); | ||||
|       acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes); | ||||
|     } | ||||
|  | ||||
|   if ( CommunicatorPolicy == CommunicatorPolicySequential ) {  | ||||
|     this->StencilSendToRecvFromComplete(list,dir); | ||||
|   } | ||||
|  | ||||
|   return off_node_bytes; | ||||
| } | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | ||||
| { | ||||
|   SendToRecvFromComplete(waitall); | ||||
| } | ||||
| void CartesianCommunicator::StencilBarrier(void) | ||||
| { | ||||
|   MPI_Barrier  (ShmComm); | ||||
| } | ||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir) | ||||
| { | ||||
|   int nreq=list.size(); | ||||
|  | ||||
| @@ -418,6 +409,13 @@ void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> & | ||||
|   assert(ierr==0); | ||||
|   list.resize(0); | ||||
| } | ||||
| void CartesianCommunicator::StencilBarrier(void) | ||||
| { | ||||
|   MPI_Barrier  (ShmComm); | ||||
| } | ||||
| //void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||
| //{ | ||||
| //} | ||||
| void CartesianCommunicator::Barrier(void) | ||||
| { | ||||
|   int ierr = MPI_Barrier(communicator); | ||||
| @@ -437,6 +435,10 @@ int CartesianCommunicator::RankWorld(void){ | ||||
|   MPI_Comm_rank(communicator_world,&r); | ||||
|   return r; | ||||
| } | ||||
| void CartesianCommunicator::BarrierWorld(void){ | ||||
|   int ierr = MPI_Barrier(communicator_world); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) | ||||
| { | ||||
|   int ierr= MPI_Bcast(data, | ||||
| @@ -479,5 +481,3 @@ void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
|   | ||||
| @@ -45,12 +45,14 @@ void CartesianCommunicator::Init(int *argc, char *** arv) | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)  | ||||
|   : CartesianCommunicator(processors)  | ||||
| { | ||||
|   _shm_processors = Coordinate(processors.size(),1); | ||||
|   srank=0; | ||||
|   SetCommunicator(communicator_world); | ||||
| } | ||||
|  | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||
| { | ||||
|   _shm_processors = Coordinate(processors.size(),1); | ||||
|   _processors = processors; | ||||
|   _ndimension = processors.size();  assert(_ndimension>=1); | ||||
|   _processor_coor.resize(_ndimension); | ||||
| @@ -67,24 +69,18 @@ CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||
|  | ||||
| CartesianCommunicator::~CartesianCommunicator(){} | ||||
|  | ||||
| void CartesianCommunicator::GlobalMax(float &){} | ||||
| void CartesianCommunicator::GlobalMax(double &){} | ||||
| void CartesianCommunicator::GlobalSum(float &){} | ||||
| void CartesianCommunicator::GlobalSumVector(float *,int N){} | ||||
| void CartesianCommunicator::GlobalSum(double &){} | ||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||
| void CartesianCommunicator::GlobalSum(uint32_t &){} | ||||
| void CartesianCommunicator::GlobalSum(uint64_t &){} | ||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||
| void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){} | ||||
| void CartesianCommunicator::GlobalXOR(uint32_t &){} | ||||
| void CartesianCommunicator::GlobalXOR(uint64_t &){} | ||||
|  | ||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, | ||||
| 					   void *recv, | ||||
| 					   int xmit_to_rank, | ||||
| 					   int recv_from_rank, | ||||
| 					   int bytes) | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
|  | ||||
|  | ||||
| // Basic Halo comms primitive -- should never call in single node | ||||
| void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| @@ -95,20 +91,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 						void *xmit, | ||||
| 						int dest, | ||||
| 						void *recv, | ||||
| 						int from, | ||||
| 						int bytes) | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||
| { | ||||
|   bcopy(in,out,bytes*words); | ||||
| @@ -122,6 +104,7 @@ int  CartesianCommunicator::RankWorld(void){return 0;} | ||||
| void CartesianCommunicator::Barrier(void){} | ||||
| void CartesianCommunicator::Broadcast(int root,void* data, int bytes) {} | ||||
| void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) { } | ||||
| void CartesianCommunicator::BarrierWorld(void) { } | ||||
| int  CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) {  return 0;} | ||||
| void CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor){  coor = _processor_coor; } | ||||
| void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest) | ||||
| @@ -131,31 +114,24 @@ void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest | ||||
| } | ||||
|  | ||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||
| 						     int xmit_to_rank, | ||||
| 						     int xmit_to_rank,int dox, | ||||
| 						     void *recv, | ||||
| 						     int recv_from_rank, | ||||
| 						     int recv_from_rank,int dor, | ||||
| 						     int bytes, int dir) | ||||
| { | ||||
|   std::vector<CommsRequest_t> list; | ||||
|   // Discard the "dir" | ||||
|   SendToRecvFromBegin   (list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); | ||||
|   SendToRecvFromComplete(list); | ||||
|   return 2.0*bytes; | ||||
| } | ||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 							 void *xmit, | ||||
| 							 int xmit_to_rank, | ||||
| 							 int xmit_to_rank,int dox, | ||||
| 							 void *recv, | ||||
| 							 int recv_from_rank, | ||||
| 							 int bytes, int dir) | ||||
| 							 int recv_from_rank,int dor, | ||||
| 							 int xbytes,int rbytes, int dir) | ||||
| { | ||||
|   // Discard the "dir" | ||||
|   SendToRecvFromBegin(list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); | ||||
|   return 2.0*bytes; | ||||
|   return xbytes+rbytes; | ||||
| } | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | ||||
| { | ||||
|   SendToRecvFromComplete(waitall); | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::StencilBarrier(void){}; | ||||
|   | ||||
| @@ -74,7 +74,9 @@ void *SharedMemory::ShmBufferMalloc(size_t bytes){ | ||||
|   if (heap_bytes >= heap_size) { | ||||
|     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; | ||||
|     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; | ||||
|     std::cout<< " Current value is " << (heap_size/(1024*1024)) <<std::endl; | ||||
|     std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current heap  is " << (heap_size/(1024*1024)) <<"MB"<<std::endl; | ||||
|     assert(heap_bytes<heap_size); | ||||
|   } | ||||
|   //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl; | ||||
| @@ -89,6 +91,59 @@ void *SharedMemory::ShmBufferSelf(void) | ||||
|   //std::cerr << "ShmBufferSelf "<<ShmRank<<" "<<std::hex<< ShmCommBufs[ShmRank] <<std::dec<<std::endl; | ||||
|   return ShmCommBufs[ShmRank]; | ||||
| } | ||||
| static inline int divides(int a,int b) | ||||
| { | ||||
|   return ( b == ( (b/a)*a ) ); | ||||
| } | ||||
| void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Allow user to configure through environment variable | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   char* str = getenv(("GRID_SHM_DIMS_" + std::to_string(ShmDims.size())).c_str()); | ||||
|   if ( str ) { | ||||
|     std::vector<int> IntShmDims; | ||||
|     GridCmdOptionIntVector(std::string(str),IntShmDims); | ||||
|     assert(IntShmDims.size() == WorldDims.size()); | ||||
|     long ShmSize = 1; | ||||
|     for (int dim=0;dim<WorldDims.size();dim++) { | ||||
|       ShmSize *= (ShmDims[dim] = IntShmDims[dim]); | ||||
|       assert(divides(ShmDims[dim],WorldDims[dim])); | ||||
|     } | ||||
|     assert(ShmSize == WorldShmSize); | ||||
|     return; | ||||
|   } | ||||
|    | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Powers of 2,3,5 only in prime decomposition for now | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   int ndimension = WorldDims.size(); | ||||
|   ShmDims=Coordinate(ndimension,1); | ||||
|  | ||||
|   std::vector<int> primes({2,3,5}); | ||||
|  | ||||
|   int dim = 0; | ||||
|   int last_dim = ndimension - 1; | ||||
|   int AutoShmSize = 1; | ||||
|   while(AutoShmSize != WorldShmSize) { | ||||
|     int p; | ||||
|     for(p=0;p<primes.size();p++) { | ||||
|       int prime=primes[p]; | ||||
|       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) | ||||
|         && divides(prime,WorldShmSize/AutoShmSize)  ) { | ||||
|   AutoShmSize*=prime; | ||||
|   ShmDims[dim]*=prime; | ||||
|   last_dim = dim; | ||||
|   break; | ||||
|       } | ||||
|     } | ||||
|     if (p == primes.size() && last_dim == dim) { | ||||
|       std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl; | ||||
|       exit(EXIT_FAILURE); | ||||
|     } | ||||
|     dim=(dim+1) %ndimension; | ||||
|   } | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid);  | ||||
|  | ||||
|   | ||||
| @@ -93,16 +93,17 @@ public: | ||||
|   // Create an optimal reordered communicator that makes MPI_Cart_create get it right | ||||
|   ////////////////////////////////////////////////////////////////////////////////////// | ||||
|   static void Init(Grid_MPI_Comm comm); // Typically MPI_COMM_WORLD | ||||
|   static void OptimalCommunicator            (const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||
|   static void OptimalCommunicatorHypercube   (const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||
|   static void OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||
|   // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||
|   static void OptimalCommunicator            (const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &ShmDims);  | ||||
|   static void OptimalCommunicatorHypercube   (const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &ShmDims);  | ||||
|   static void OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &ShmDims);  | ||||
|   static void GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims); | ||||
|   /////////////////////////////////////////////////// | ||||
|   // Provide shared memory facilities off comm world | ||||
|   /////////////////////////////////////////////////// | ||||
|   static void SharedMemoryAllocate(uint64_t bytes, int flags); | ||||
|   static void SharedMemoryFree(void); | ||||
|   static void SharedMemoryCopy(void *dest,const void *src,size_t bytes); | ||||
|   static void SharedMemoryCopy(void *dest,void *src,size_t bytes); | ||||
|   static void SharedMemoryZero(void *dest,size_t bytes); | ||||
|  | ||||
| }; | ||||
|   | ||||
| @@ -7,6 +7,7 @@ | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -26,15 +27,131 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #define Mheader "SharedMemoryMpi: " | ||||
|  | ||||
| #include <Grid/GridCore.h> | ||||
| #include <pwd.h> | ||||
|  | ||||
| #ifdef GRID_NVCC | ||||
| #ifdef GRID_CUDA | ||||
| #include <cuda_runtime_api.h> | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
| #include <hip/hip_runtime_api.h> | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
| #define GRID_SYCL_LEVEL_ZERO_IPC | ||||
| #include <syscall.h> | ||||
| #define SHM_SOCKETS  | ||||
| #endif | ||||
|  | ||||
| #include <sys/socket.h> | ||||
| #include <sys/un.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
| #define header "SharedMemoryMpi: " | ||||
|  | ||||
| #ifdef SHM_SOCKETS | ||||
|  | ||||
| /* | ||||
|  * Barbaric extra intranode communication route in case we need sockets to pass FDs | ||||
|  * Forced by level_zero not being nicely designed | ||||
|  */ | ||||
| static int sock; | ||||
| static const char *sock_path_fmt = "/tmp/GridUnixSocket.%d"; | ||||
| static char sock_path[256]; | ||||
| class UnixSockets { | ||||
| public: | ||||
|   static void Open(int rank) | ||||
|   { | ||||
|     int errnum; | ||||
|  | ||||
|     sock = socket(AF_UNIX, SOCK_DGRAM, 0);  assert(sock>0); | ||||
|  | ||||
|     struct sockaddr_un sa_un = { 0 }; | ||||
|     sa_un.sun_family = AF_UNIX; | ||||
|     snprintf(sa_un.sun_path, sizeof(sa_un.sun_path),sock_path_fmt,rank); | ||||
|     unlink(sa_un.sun_path); | ||||
|     if (bind(sock, (struct sockaddr *)&sa_un, sizeof(sa_un))) { | ||||
|       perror("bind failure"); | ||||
|       exit(EXIT_FAILURE); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   static int RecvFileDescriptor(void) | ||||
|   { | ||||
|     int n; | ||||
|     int fd; | ||||
|     char buf[1]; | ||||
|     struct iovec iov; | ||||
|     struct msghdr msg; | ||||
|     struct cmsghdr *cmsg; | ||||
|     char cms[CMSG_SPACE(sizeof(int))]; | ||||
|  | ||||
|     iov.iov_base = buf; | ||||
|     iov.iov_len = 1; | ||||
|  | ||||
|     memset(&msg, 0, sizeof msg); | ||||
|     msg.msg_name = 0; | ||||
|     msg.msg_namelen = 0; | ||||
|     msg.msg_iov = &iov; | ||||
|     msg.msg_iovlen = 1; | ||||
|  | ||||
|     msg.msg_control = (caddr_t)cms; | ||||
|     msg.msg_controllen = sizeof cms; | ||||
|  | ||||
|     if((n=recvmsg(sock, &msg, 0)) < 0) { | ||||
|       perror("recvmsg failed"); | ||||
|       return -1; | ||||
|     } | ||||
|     if(n == 0){ | ||||
|       perror("recvmsg returned 0"); | ||||
|       return -1; | ||||
|     } | ||||
|     cmsg = CMSG_FIRSTHDR(&msg); | ||||
|  | ||||
|     memmove(&fd, CMSG_DATA(cmsg), sizeof(int)); | ||||
|  | ||||
|     return fd; | ||||
|   } | ||||
|  | ||||
|   static void SendFileDescriptor(int fildes,int xmit_to_rank) | ||||
|   { | ||||
|     struct msghdr msg; | ||||
|     struct iovec iov; | ||||
|     struct cmsghdr *cmsg = NULL; | ||||
|     char ctrl[CMSG_SPACE(sizeof(int))]; | ||||
|     char data = ' '; | ||||
|  | ||||
|     memset(&msg, 0, sizeof(struct msghdr)); | ||||
|     memset(ctrl, 0, CMSG_SPACE(sizeof(int))); | ||||
|     iov.iov_base = &data; | ||||
|     iov.iov_len = sizeof(data); | ||||
|      | ||||
|     sprintf(sock_path,sock_path_fmt,xmit_to_rank); | ||||
|      | ||||
|     struct sockaddr_un sa_un = { 0 }; | ||||
|     sa_un.sun_family = AF_UNIX; | ||||
|     snprintf(sa_un.sun_path, sizeof(sa_un.sun_path),sock_path_fmt,xmit_to_rank); | ||||
|  | ||||
|     msg.msg_name = (void *)&sa_un; | ||||
|     msg.msg_namelen = sizeof(sa_un); | ||||
|     msg.msg_iov = &iov; | ||||
|     msg.msg_iovlen = 1; | ||||
|     msg.msg_controllen =  CMSG_SPACE(sizeof(int)); | ||||
|     msg.msg_control = ctrl; | ||||
|  | ||||
|     cmsg = CMSG_FIRSTHDR(&msg); | ||||
|     cmsg->cmsg_level = SOL_SOCKET; | ||||
|     cmsg->cmsg_type = SCM_RIGHTS; | ||||
|     cmsg->cmsg_len = CMSG_LEN(sizeof(int)); | ||||
|  | ||||
|     *((int *) CMSG_DATA(cmsg)) = fildes; | ||||
|  | ||||
|     sendmsg(sock, &msg, 0); | ||||
|   }; | ||||
| }; | ||||
| #endif | ||||
|  | ||||
|  | ||||
| /*Construct from an MPI communicator*/ | ||||
| void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||
| { | ||||
| @@ -47,13 +164,18 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
|   // Split into groups that can share memory | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
| #ifndef GRID_MPI3_SHM_NONE | ||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm); | ||||
| #else | ||||
|   MPI_Comm_split(comm, WorldRank, 0, &WorldShmComm); | ||||
| #endif | ||||
|  | ||||
|   MPI_Comm_rank(WorldShmComm     ,&WorldShmRank); | ||||
|   MPI_Comm_size(WorldShmComm     ,&WorldShmSize); | ||||
|  | ||||
|   if ( WorldRank == 0) { | ||||
|     std::cout << header " World communicator of size " <<WorldSize << std::endl;   | ||||
|     std::cout << header " Node  communicator of size " <<WorldShmSize << std::endl; | ||||
|     std::cout << Mheader " World communicator of size " <<WorldSize << std::endl;   | ||||
|     std::cout << Mheader " Node  communicator of size " <<WorldShmSize << std::endl; | ||||
|   } | ||||
|   // WorldShmComm, WorldShmSize, WorldShmRank | ||||
|  | ||||
| @@ -61,6 +183,7 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||
|   WorldNodes = WorldSize/WorldShmSize; | ||||
|   assert( (WorldNodes * WorldShmSize) == WorldSize ); | ||||
|  | ||||
|  | ||||
|   // FIXME: Check all WorldShmSize are the same ? | ||||
|  | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
| @@ -139,7 +262,7 @@ int Log2Size(int TwoToPower,int MAXLOG2) | ||||
|   } | ||||
|   return log2size; | ||||
| } | ||||
| void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||
| void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &SHM) | ||||
| { | ||||
|   ////////////////////////////////////////////////////////////////////////////// | ||||
|   // Look and see if it looks like an HPE 8600 based on hostname conventions | ||||
| @@ -152,39 +275,11 @@ void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_M | ||||
|   gethostname(name,namelen); | ||||
|   int nscan = sscanf(name,"r%di%dn%d",&R,&I,&N) ; | ||||
|  | ||||
|   if(nscan==3 && HPEhypercube ) OptimalCommunicatorHypercube(processors,optimal_comm); | ||||
|   else                          OptimalCommunicatorSharedMemory(processors,optimal_comm); | ||||
|   if(nscan==3 && HPEhypercube ) OptimalCommunicatorHypercube(processors,optimal_comm,SHM); | ||||
|   else                          OptimalCommunicatorSharedMemory(processors,optimal_comm,SHM); | ||||
| } | ||||
| static inline int divides(int a,int b) | ||||
| { | ||||
|   return ( b == ( (b/a)*a ) ); | ||||
| } | ||||
| void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Powers of 2,3,5 only in prime decomposition for now | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   int ndimension = WorldDims.size(); | ||||
|   ShmDims=Coordinate(ndimension,1); | ||||
|  | ||||
|   std::vector<int> primes({2,3,5}); | ||||
|  | ||||
|   int dim = 0; | ||||
|   int AutoShmSize = 1; | ||||
|   while(AutoShmSize != WorldShmSize) { | ||||
|     for(int p=0;p<primes.size();p++) { | ||||
|       int prime=primes[p]; | ||||
|       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) | ||||
|         && divides(prime,WorldShmSize/AutoShmSize)  ) { | ||||
| 	AutoShmSize*=prime; | ||||
| 	ShmDims[dim]*=prime; | ||||
| 	break; | ||||
|       } | ||||
|     } | ||||
|     dim=(dim+1) %ndimension; | ||||
|   } | ||||
| } | ||||
| void GlobalSharedMemory::OptimalCommunicatorHypercube(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||
| void GlobalSharedMemory::OptimalCommunicatorHypercube(const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &SHM) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Assert power of two shm_size. | ||||
| @@ -257,6 +352,7 @@ void GlobalSharedMemory::OptimalCommunicatorHypercube(const Coordinate &processo | ||||
|   Coordinate HyperCoor(ndimension); | ||||
|  | ||||
|   GetShmDims(WorldDims,ShmDims); | ||||
|   SHM = ShmDims; | ||||
|    | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Establish torus of processes and nodes with sub-blockings | ||||
| @@ -304,7 +400,7 @@ void GlobalSharedMemory::OptimalCommunicatorHypercube(const Coordinate &processo | ||||
|   int ierr= MPI_Comm_split(WorldComm,0,rank,&optimal_comm); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void GlobalSharedMemory::OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||
| void GlobalSharedMemory::OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &SHM) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Identify subblock of ranks on node spreading across dims | ||||
| @@ -316,6 +412,8 @@ void GlobalSharedMemory::OptimalCommunicatorSharedMemory(const Coordinate &proce | ||||
|   Coordinate ShmCoor(ndimension);    Coordinate NodeCoor(ndimension);   Coordinate WorldCoor(ndimension); | ||||
|  | ||||
|   GetShmDims(WorldDims,ShmDims); | ||||
|   SHM=ShmDims; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Establish torus of processes and nodes with sub-blockings | ||||
|   //////////////////////////////////////////////////////////////// | ||||
| @@ -354,7 +452,7 @@ void GlobalSharedMemory::OptimalCommunicatorSharedMemory(const Coordinate &proce | ||||
| #ifdef GRID_MPI3_SHMGET | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   std::cout << header "SharedMemoryAllocate "<< bytes<< " shmget implementation "<<std::endl; | ||||
|   std::cout << Mheader "SharedMemoryAllocate "<< bytes<< " shmget implementation "<<std::endl; | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0); | ||||
|  | ||||
| @@ -413,7 +511,47 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Hugetlbfs mapping intended | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| #ifdef GRID_NVCC | ||||
| #if defined(GRID_CUDA) ||defined(GRID_HIP)  || defined(GRID_SYCL) | ||||
|  | ||||
| //if defined(GRID_SYCL) | ||||
| #if 0 | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   void * ShmCommBuf ;  | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0); | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // allocate the pointer array for shared windows for our group | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   MPI_Barrier(WorldShmComm); | ||||
|   WorldShmCommBufs.resize(WorldShmSize); | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Each MPI rank should allocate our own buffer | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||
|  | ||||
|   if (ShmCommBuf == (void *)NULL ) { | ||||
|     std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||
|     exit(EXIT_FAILURE);   | ||||
|   } | ||||
|  | ||||
|   std::cout << WorldRank << Mheader " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes  | ||||
| 	    << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||
|  | ||||
|   SharedMemoryZero(ShmCommBuf,bytes); | ||||
|  | ||||
|   assert(WorldShmSize == 1); | ||||
|   for(int r=0;r<WorldShmSize;r++){ | ||||
|     WorldShmCommBufs[r] = ShmCommBuf; | ||||
|   } | ||||
|   _ShmAllocBytes=bytes; | ||||
|   _ShmAlloc=1; | ||||
| } | ||||
| #endif | ||||
|  | ||||
| #if defined(GRID_CUDA) ||defined(GRID_HIP) ||defined(GRID_SYCL)   | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   void * ShmCommBuf ;  | ||||
| @@ -433,51 +571,91 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   //  cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2); | ||||
|  | ||||
| #ifdef GRID_IBM_SUMMIT | ||||
|   // IBM Jsrun makes cuda Device numbering screwy and not match rank | ||||
|     std::cout << "IBM Summit or similar - NOT setting device to WorldShmRank"<<std::endl; | ||||
| #else | ||||
|     std::cout << "setting device to WorldShmRank"<<std::endl; | ||||
|     cudaSetDevice(WorldShmRank); | ||||
| #endif | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Each MPI rank should allocate our own buffer | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   auto err =  cudaMalloc(&ShmCommBuf, bytes); | ||||
|   if ( err !=  cudaSuccess) { | ||||
|     std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed for " << bytes<<" bytes " <<cudaGetErrorString(err)<< std::endl; | ||||
|     exit(EXIT_FAILURE);   | ||||
|   } | ||||
|   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||
|   if (ShmCommBuf == (void *)NULL ) { | ||||
|     std::cerr << " SharedMemoryMPI.cc cudaMallocManaged failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||
|     std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||
|     exit(EXIT_FAILURE);   | ||||
|   } | ||||
|   if ( WorldRank == 0 ){ | ||||
|     std::cout << header " SharedMemoryMPI.cc cudaMalloc "<< bytes << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||
|     std::cout << WorldRank << Mheader " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes  | ||||
| 	      << "bytes at "<< std::hex<< ShmCommBuf << " - "<<(bytes-1+(uint64_t)ShmCommBuf) <<std::dec<<" for comms buffers " <<std::endl; | ||||
|   } | ||||
|   SharedMemoryZero(ShmCommBuf,bytes); | ||||
|  | ||||
|   std::cout<< "Setting up IPC"<<std::endl; | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Loop over ranks/gpu's on our node | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| #ifdef SHM_SOCKETS | ||||
|   UnixSockets::Open(WorldShmRank); | ||||
| #endif | ||||
|   for(int r=0;r<WorldShmSize;r++){ | ||||
|  | ||||
|     MPI_Barrier(WorldShmComm); | ||||
|  | ||||
| #ifndef GRID_MPI3_SHM_NONE | ||||
|     ////////////////////////////////////////////////// | ||||
|     // If it is me, pass around the IPC access key | ||||
|     ////////////////////////////////////////////////// | ||||
|     cudaIpcMemHandle_t handle; | ||||
|     void * thisBuf = ShmCommBuf; | ||||
|     if(!Stencil_force_mpi) { | ||||
| #ifdef GRID_SYCL_LEVEL_ZERO_IPC | ||||
|     typedef struct { int fd; pid_t pid ; ze_ipc_mem_handle_t ze; } clone_mem_t; | ||||
|  | ||||
|     auto zeDevice    = cl::sycl::get_native<cl::sycl::backend::level_zero>(theGridAccelerator->get_device()); | ||||
|     auto zeContext   = cl::sycl::get_native<cl::sycl::backend::level_zero>(theGridAccelerator->get_context()); | ||||
|        | ||||
|     ze_ipc_mem_handle_t ihandle; | ||||
|     clone_mem_t handle; | ||||
|      | ||||
|     if ( r==WorldShmRank ) {  | ||||
|       err = cudaIpcGetMemHandle(&handle,ShmCommBuf); | ||||
|       auto err = zeMemGetIpcHandle(zeContext,ShmCommBuf,&ihandle); | ||||
|       if ( err != ZE_RESULT_SUCCESS ) { | ||||
| 	std::cerr << "SharedMemoryMPI.cc zeMemGetIpcHandle failed for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl; | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } else { | ||||
| 	std::cout << "SharedMemoryMPI.cc zeMemGetIpcHandle succeeded for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl; | ||||
|       } | ||||
|       memcpy((void *)&handle.fd,(void *)&ihandle,sizeof(int)); | ||||
|       handle.pid = getpid(); | ||||
|       memcpy((void *)&handle.ze,(void *)&ihandle,sizeof(ihandle)); | ||||
| #ifdef SHM_SOCKETS | ||||
|       for(int rr=0;rr<WorldShmSize;rr++){ | ||||
| 	if(rr!=r){ | ||||
| 	  UnixSockets::SendFileDescriptor(handle.fd,rr); | ||||
| 	} | ||||
|       } | ||||
| #endif | ||||
|     } | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     cudaIpcMemHandle_t handle; | ||||
|     if ( r==WorldShmRank ) {  | ||||
|       auto err = cudaIpcGetMemHandle(&handle,ShmCommBuf); | ||||
|       if ( err !=  cudaSuccess) { | ||||
| 	std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } | ||||
|     } | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|     hipIpcMemHandle_t handle;     | ||||
|     if ( r==WorldShmRank ) {  | ||||
|       auto err = hipIpcGetMemHandle(&handle,ShmCommBuf); | ||||
|       if ( err !=  hipSuccess) { | ||||
| 	std::cerr << " SharedMemoryMPI.cc hipIpcGetMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } | ||||
|     } | ||||
| #endif | ||||
|  | ||||
|     ////////////////////////////////////////////////// | ||||
|     // Share this IPC handle across the Shm Comm | ||||
|     ////////////////////////////////////////////////// | ||||
|     {  | ||||
|       MPI_Barrier(WorldShmComm); | ||||
|       int ierr=MPI_Bcast(&handle, | ||||
| 			 sizeof(handle), | ||||
| 			 MPI_BYTE, | ||||
| @@ -489,28 +667,84 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
|     /////////////////////////////////////////////////////////////// | ||||
|     // If I am not the source, overwrite thisBuf with remote buffer | ||||
|     /////////////////////////////////////////////////////////////// | ||||
|     void * thisBuf = ShmCommBuf; | ||||
|  | ||||
| #ifdef GRID_SYCL_LEVEL_ZERO_IPC | ||||
|     if ( r!=WorldShmRank ) { | ||||
|       err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess); | ||||
|       thisBuf = nullptr; | ||||
|       int myfd; | ||||
| #ifdef SHM_SOCKETS | ||||
|       myfd=UnixSockets::RecvFileDescriptor(); | ||||
| #else | ||||
|       std::cout<<"mapping seeking remote pid/fd " | ||||
| 	       <<handle.pid<<"/" | ||||
| 	       <<handle.fd<<std::endl; | ||||
|  | ||||
|       int pidfd = syscall(SYS_pidfd_open,handle.pid,0); | ||||
|       std::cout<<"Using IpcHandle pidfd "<<pidfd<<"\n"; | ||||
|       //      int myfd  = syscall(SYS_pidfd_getfd,pidfd,handle.fd,0); | ||||
|       myfd  = syscall(438,pidfd,handle.fd,0); | ||||
|       int err_t = errno; | ||||
|       if (myfd < 0) { | ||||
|         fprintf(stderr,"pidfd_getfd returned %d errno was %d\n", myfd,err_t); fflush(stderr); | ||||
| 	perror("pidfd_getfd failed "); | ||||
| 	assert(0); | ||||
|       } | ||||
| #endif | ||||
|       std::cout<<"Using IpcHandle mapped remote pid "<<handle.pid <<" FD "<<handle.fd <<" to myfd "<<myfd<<"\n"; | ||||
|       memcpy((void *)&ihandle,(void *)&handle.ze,sizeof(ihandle)); | ||||
|       memcpy((void *)&ihandle,(void *)&myfd,sizeof(int)); | ||||
|  | ||||
|       auto err = zeMemOpenIpcHandle(zeContext,zeDevice,ihandle,0,&thisBuf); | ||||
|       if ( err != ZE_RESULT_SUCCESS ) { | ||||
| 	std::cerr << "SharedMemoryMPI.cc "<<zeContext<<" "<<zeDevice<<std::endl; | ||||
| 	std::cerr << "SharedMemoryMPI.cc zeMemOpenIpcHandle failed for rank "<<r<<" "<<std::hex<<err<<std::dec<<std::endl;  | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } else { | ||||
| 	std::cout << "SharedMemoryMPI.cc zeMemOpenIpcHandle succeeded for rank "<<r<<std::endl; | ||||
| 	std::cout << "SharedMemoryMPI.cc zeMemOpenIpcHandle pointer is "<<std::hex<<thisBuf<<std::dec<<std::endl; | ||||
|       } | ||||
|       assert(thisBuf!=nullptr); | ||||
|     } | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     if ( r!=WorldShmRank ) {  | ||||
|       auto err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess); | ||||
|       if ( err !=  cudaSuccess) { | ||||
| 	std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } | ||||
|     } | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|     if ( r!=WorldShmRank ) {  | ||||
|       auto err = hipIpcOpenMemHandle(&thisBuf,handle,hipIpcMemLazyEnablePeerAccess); | ||||
|       if ( err !=  hipSuccess) { | ||||
| 	std::cerr << " SharedMemoryMPI.cc hipIpcOpenMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||
| 	exit(EXIT_FAILURE); | ||||
|       } | ||||
|     } | ||||
| #endif | ||||
|     /////////////////////////////////////////////////////////////// | ||||
|     // Save a copy of the device buffers | ||||
|     /////////////////////////////////////////////////////////////// | ||||
|     } | ||||
|     WorldShmCommBufs[r] = thisBuf; | ||||
| #else | ||||
|     WorldShmCommBufs[r] = ShmCommBuf; | ||||
| #endif | ||||
|     MPI_Barrier(WorldShmComm); | ||||
|   } | ||||
|  | ||||
|   _ShmAllocBytes=bytes; | ||||
|   _ShmAlloc=1; | ||||
| } | ||||
| #endif | ||||
|  | ||||
| #else  | ||||
| #ifdef GRID_MPI3_SHMMMAP | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   std::cout << header "SharedMemoryAllocate "<< bytes<< " MMAP implementation "<< GRID_SHM_PATH <<std::endl; | ||||
|   std::cout << Mheader "SharedMemoryAllocate "<< bytes<< " MMAP implementation "<< GRID_SHM_PATH <<std::endl; | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0); | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -547,7 +781,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
|     assert(((uint64_t)ptr&0x3F)==0); | ||||
|     close(fd); | ||||
|     WorldShmCommBufs[r] =ptr; | ||||
|     //    std::cout << header "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; | ||||
|     //    std::cout << Mheader "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; | ||||
|   } | ||||
|   _ShmAlloc=1; | ||||
|   _ShmAllocBytes  = bytes; | ||||
| @@ -557,7 +791,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| #ifdef GRID_MPI3_SHM_NONE | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   std::cout << header "SharedMemoryAllocate "<< bytes<< " MMAP anonymous implementation "<<std::endl; | ||||
|   std::cout << Mheader "SharedMemoryAllocate "<< bytes<< " MMAP anonymous implementation "<<std::endl; | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0); | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -604,7 +838,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| {  | ||||
|   std::cout << header "SharedMemoryAllocate "<< bytes<< " SHMOPEN implementation "<<std::endl; | ||||
|   std::cout << Mheader "SharedMemoryAllocate "<< bytes<< " SHMOPEN implementation "<<std::endl; | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0);  | ||||
|   MPI_Barrier(WorldShmComm); | ||||
| @@ -633,7 +867,6 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| #endif | ||||
|       void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0); | ||||
|        | ||||
|       //      std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< size<< "bytes)"<<std::endl; | ||||
|       if ( ptr == (void * )MAP_FAILED ) {        | ||||
| 	perror("failed mmap");      | ||||
| 	assert(0);     | ||||
| @@ -677,16 +910,16 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| ///////////////////////////////////////////////////////////////////////// | ||||
| void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||
| { | ||||
| #ifdef GRID_NVCC | ||||
|   cudaMemset(dest,0,bytes); | ||||
| #if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL) | ||||
|   acceleratorMemSet(dest,0,bytes); | ||||
| #else | ||||
|   bzero(dest,bytes); | ||||
| #endif | ||||
| } | ||||
| void GlobalSharedMemory::SharedMemoryCopy(void *dest,const void *src,size_t bytes) | ||||
| void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||
| { | ||||
| #ifdef GRID_NVCC | ||||
|   cudaMemcpy(dest,src,bytes,cudaMemcpyDefault); | ||||
| #if defined(GRID_CUDA) || defined(GRID_HIP) || defined(GRID_SYCL) | ||||
|   acceleratorCopyToDevice(src,dest,bytes); | ||||
| #else    | ||||
|   bcopy(src,dest,bytes); | ||||
| #endif | ||||
| @@ -705,7 +938,11 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
|   // Split into groups that can share memory | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
| #ifndef GRID_MPI3_SHM_NONE | ||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm); | ||||
| #else | ||||
|   MPI_Comm_split(comm, rank, 0, &ShmComm); | ||||
| #endif | ||||
|   MPI_Comm_rank(ShmComm     ,&ShmRank); | ||||
|   MPI_Comm_size(ShmComm     ,&ShmSize); | ||||
|   ShmCommBufs.resize(ShmSize); | ||||
| @@ -735,25 +972,18 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | ||||
|   std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r; | ||||
|   MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);  | ||||
|  | ||||
| #ifdef GRID_IBM_SUMMIT | ||||
|   // Hide the shared memory path between sockets  | ||||
|   // if even number of nodes | ||||
|   if ( (ShmSize & 0x1)==0 ) { | ||||
|     int SocketSize = ShmSize/2; | ||||
|     int mySocket = ShmRank/SocketSize;  | ||||
| #ifdef GRID_SHM_FORCE_MPI | ||||
|   // Hide the shared memory path between ranks | ||||
|   { | ||||
|     for(int r=0;r<size;r++){ | ||||
|       int hisRank=ShmRanks[r]; | ||||
|       if ( hisRank!= MPI_UNDEFINED ) { | ||||
| 	int hisSocket=hisRank/SocketSize; | ||||
| 	if ( hisSocket != mySocket ) { | ||||
|       if ( r!=rank ) { | ||||
| 	ShmRanks[r] = MPI_UNDEFINED; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   } | ||||
| #endif | ||||
|  | ||||
|   SharedMemoryTest(); | ||||
|   //SharedMemoryTest(); | ||||
| } | ||||
| ////////////////////////////////////////////////////////////////// | ||||
| // On node barrier | ||||
|   | ||||
| @@ -29,6 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
| #define header "SharedMemoryNone: " | ||||
|  | ||||
| /*Construct from an MPI communicator*/ | ||||
| void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||
| @@ -47,14 +48,47 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||
|   _ShmSetup=1; | ||||
| } | ||||
|  | ||||
| void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||
| void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm,Coordinate &SHM) | ||||
| { | ||||
|   optimal_comm = WorldComm; | ||||
|   SHM = Coordinate(processors.size(),1); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Hugetlbfs mapping intended, use anonymous mmap | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| #if 1 | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   std::cout << header "SharedMemoryAllocate "<< bytes<< " GPU implementation "<<std::endl; | ||||
|   void * ShmCommBuf ;  | ||||
|   assert(_ShmSetup==1); | ||||
|   assert(_ShmAlloc==0); | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Each MPI rank should allocate our own buffer | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||
|  | ||||
|   if (ShmCommBuf == (void *)NULL ) { | ||||
|     std::cerr << " SharedMemoryNone.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||
|     exit(EXIT_FAILURE);   | ||||
|   } | ||||
|   if ( WorldRank == 0 ){ | ||||
|     std::cout << WorldRank << header " SharedMemoryNone.cc acceleratorAllocDevice "<< bytes  | ||||
| 	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||
|   } | ||||
|   SharedMemoryZero(ShmCommBuf,bytes); | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Loop over ranks/gpu's on our node | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   WorldShmCommBufs[0] = ShmCommBuf; | ||||
|  | ||||
|   _ShmAllocBytes=bytes; | ||||
|   _ShmAlloc=1; | ||||
| } | ||||
| #else | ||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
| { | ||||
|   void * ShmCommBuf ;  | ||||
| @@ -83,7 +117,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||
|   _ShmAllocBytes=bytes; | ||||
|   _ShmAlloc=1; | ||||
| }; | ||||
|  | ||||
| #endif | ||||
| void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||
| { | ||||
|   acceleratorMemSet(dest,0,bytes); | ||||
| } | ||||
| void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||
| { | ||||
|   acceleratorCopyToDevice(src,dest,bytes); | ||||
| } | ||||
| //////////////////////////////////////////////////////// | ||||
| // Global shared functionality finished | ||||
| // Now move to per communicator functionality | ||||
|   | ||||
| @@ -49,4 +49,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #ifdef GRID_COMMS_SHMEM | ||||
| #include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator | ||||
| #endif  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
| auto Cshift(const Expression &expr,int dim,int shift)  -> decltype(closure(expr))  | ||||
| { | ||||
|   return Cshift(closure(expr),dim,shift); | ||||
| } | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
|   | ||||
| @@ -29,11 +29,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| extern Vector<std::pair<int,int> > Cshift_table;  | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| // Gather for when there is no need to SIMD split  | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| template<class vobj> void  | ||||
| Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | ||||
| Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | ||||
| { | ||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||
|  | ||||
| @@ -46,16 +48,16 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | ||||
|   int e2=rhs.Grid()->_slice_block[dimension]; | ||||
|   int ent = 0; | ||||
|  | ||||
|   static Vector<std::pair<int,int> > table; table.resize(e1*e2); | ||||
|   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||
|  | ||||
|   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||
|  | ||||
|   auto rhs_v = rhs.View(); | ||||
|   if ( cbmask == 0x3 ) {  | ||||
|     for(int n=0;n<e1;n++){ | ||||
|       for(int b=0;b<e2;b++){ | ||||
| 	int o  = n*stride; | ||||
| 	int bo = n*e2; | ||||
| 	table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | ||||
| 	Cshift_table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | ||||
|       } | ||||
|     } | ||||
|   } else {  | ||||
| @@ -65,14 +67,26 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | ||||
| 	 int o  = n*stride; | ||||
| 	 int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | ||||
| 	 if ( ocb &cbmask ) { | ||||
| 	   table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | ||||
| 	   Cshift_table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | ||||
| 	 } | ||||
|        } | ||||
|      } | ||||
|   } | ||||
|   thread_for(i,ent,{ | ||||
|     buffer[table[i].first]=rhs_v[table[i].second]; | ||||
|   { | ||||
|     auto buffer_p = & buffer[0]; | ||||
|     auto table = &Cshift_table[0]; | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView(rhs_v , rhs, AcceleratorRead); | ||||
|     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||
| 	coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||
|     }); | ||||
| #else | ||||
|     autoView(rhs_v , rhs, CpuRead); | ||||
|     thread_for(i,ent,{ | ||||
|       buffer_p[table[i].first]=rhs_v[table[i].second]; | ||||
|     }); | ||||
| #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| @@ -95,43 +109,80 @@ Gather_plane_extract(const Lattice<vobj> &rhs, | ||||
|   int e2=rhs.Grid()->_slice_block[dimension]; | ||||
|   int n1=rhs.Grid()->_slice_stride[dimension]; | ||||
|  | ||||
|   auto rhs_v = rhs.View(); | ||||
|   if ( cbmask ==0x3){ | ||||
|     thread_for_collapse(2,n,e1,{ | ||||
|       for(int b=0;b<e2;b++){ | ||||
|  | ||||
| #ifdef ACCELERATOR_CSHIFT | ||||
|     autoView(rhs_v , rhs, AcceleratorRead); | ||||
|     accelerator_for(nn,e1*e2,1,{ | ||||
| 	int n = nn%e1; | ||||
| 	int b = nn/e1; | ||||
| 	int o      =   n*n1; | ||||
| 	int offset = b+n*e2; | ||||
| 	 | ||||
| 	vobj temp =rhs_v[so+o+b]; | ||||
| 	extract<vobj>(temp,pointers,offset); | ||||
|       } | ||||
|       }); | ||||
|   } else {  | ||||
| #else | ||||
|     autoView(rhs_v , rhs, CpuRead); | ||||
|     thread_for2d(n,e1,b,e2,{ | ||||
| 	int o      =   n*n1; | ||||
| 	int offset = b+n*e2; | ||||
| 	 | ||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  | ||||
|     // Test_cshift_red_black code. | ||||
|     std::cout << " Dense packed buffer WARNING " <<std::endl; | ||||
|     thread_for_collapse(2,n,e1,{ | ||||
|       for(int b=0;b<e2;b++){ | ||||
| 	vobj temp =rhs_v[so+o+b]; | ||||
| 	extract<vobj>(temp,pointers,offset); | ||||
|       }); | ||||
| #endif | ||||
|   } else {  | ||||
|     Coordinate rdim=rhs.Grid()->_rdimensions; | ||||
|     Coordinate cdm =rhs.Grid()->_checker_dim_mask; | ||||
|     std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb? | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView(rhs_v , rhs, AcceleratorRead); | ||||
|     accelerator_for(nn,e1*e2,1,{ | ||||
| 	int n = nn%e1; | ||||
| 	int b = nn/e1; | ||||
|  | ||||
| 	Coordinate coor; | ||||
|  | ||||
| 	int o=n*n1; | ||||
| 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | ||||
| 	int oindex = o+b; | ||||
|  | ||||
|        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||
|  | ||||
| 	int ocb=1<<cb; | ||||
| 	int offset = b+n*e2; | ||||
|  | ||||
| 	if ( ocb & cbmask ) { | ||||
| 	  vobj temp =rhs_v[so+o+b]; | ||||
| 	  extract<vobj>(temp,pointers,offset); | ||||
| 	} | ||||
|       }); | ||||
| #else | ||||
|     autoView(rhs_v , rhs, CpuRead); | ||||
|     thread_for2d(n,e1,b,e2,{ | ||||
|  | ||||
| 	Coordinate coor; | ||||
|  | ||||
| 	int o=n*n1; | ||||
| 	int oindex = o+b; | ||||
|  | ||||
|        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||
|  | ||||
| 	int ocb=1<<cb; | ||||
| 	int offset = b+n*e2; | ||||
|  | ||||
| 	if ( ocb & cbmask ) { | ||||
| 	  vobj temp =rhs_v[so+o+b]; | ||||
| 	  extract<vobj>(temp,pointers,offset); | ||||
| 	} | ||||
|       }); | ||||
| #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| ////////////////////////////////////////////////////// | ||||
| // Scatter for when there is no need to SIMD split | ||||
| ////////////////////////////////////////////////////// | ||||
| template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vobj> &buffer, int dimension,int plane,int cbmask) | ||||
| template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask) | ||||
| { | ||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||
|  | ||||
| @@ -145,7 +196,8 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | ||||
|   int e2=rhs.Grid()->_slice_block[dimension]; | ||||
|   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||
|  | ||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); | ||||
|   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||
|  | ||||
|   int ent    =0; | ||||
|  | ||||
|   if ( cbmask ==0x3 ) { | ||||
| @@ -154,7 +206,7 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | ||||
|       for(int b=0;b<e2;b++){ | ||||
| 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||
| 	int bo  =n*rhs.Grid()->_slice_block[dimension]; | ||||
| 	table[ent++] = std::pair<int,int>(so+o+b,bo+b); | ||||
| 	Cshift_table[ent++] = std::pair<int,int>(so+o+b,bo+b); | ||||
|       } | ||||
|     } | ||||
|  | ||||
| @@ -165,16 +217,27 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | ||||
| 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||
| 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup | ||||
| 	if ( ocb & cbmask ) { | ||||
| 	  table[ent++]=std::pair<int,int> (so+o+b,bo++); | ||||
| 	  Cshift_table[ent++]=std::pair<int,int> (so+o+b,bo++); | ||||
| 	} | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   auto rhs_v = rhs.View(); | ||||
|   thread_for(i,ent,{ | ||||
|     rhs_v[table[i].first]=buffer[table[i].second]; | ||||
|   { | ||||
|     auto buffer_p = & buffer[0]; | ||||
|     auto table = &Cshift_table[0]; | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView( rhs_v, rhs, AcceleratorWrite); | ||||
|     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||
| 	coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second])); | ||||
|     }); | ||||
| #else | ||||
|     autoView( rhs_v, rhs, CpuWrite); | ||||
|     thread_for(i,ent,{ | ||||
|       rhs_v[table[i].first]=buffer_p[table[i].second]; | ||||
|     }); | ||||
| #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| ////////////////////////////////////////////////////// | ||||
| @@ -194,21 +257,33 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA | ||||
|   int e2=rhs.Grid()->_slice_block[dimension]; | ||||
|  | ||||
|   if(cbmask ==0x3 ) { | ||||
|     auto rhs_v = rhs.View(); | ||||
|     thread_for_collapse(2,n,e1,{ | ||||
|       for(int b=0;b<e2;b++){ | ||||
| 	int o      = n*rhs.Grid()->_slice_stride[dimension]; | ||||
| 	int offset = b+n*rhs.Grid()->_slice_block[dimension]; | ||||
|     int _slice_stride = rhs.Grid()->_slice_stride[dimension]; | ||||
|     int _slice_block = rhs.Grid()->_slice_block[dimension]; | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView( rhs_v , rhs, AcceleratorWrite); | ||||
|     accelerator_for(nn,e1*e2,1,{ | ||||
| 	int n = nn%e1; | ||||
| 	int b = nn/e1; | ||||
| 	int o      = n*_slice_stride; | ||||
| 	int offset = b+n*_slice_block; | ||||
| 	merge(rhs_v[so+o+b],pointers,offset); | ||||
|       } | ||||
|       }); | ||||
| #else | ||||
|     autoView( rhs_v , rhs, CpuWrite); | ||||
|     thread_for2d(n,e1,b,e2,{ | ||||
| 	int o      = n*_slice_stride; | ||||
| 	int offset = b+n*_slice_block; | ||||
| 	merge(rhs_v[so+o+b],pointers,offset); | ||||
|     }); | ||||
| #endif | ||||
|   } else {  | ||||
|  | ||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  | ||||
|     // Test_cshift_red_black code. | ||||
|     //    std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME | ||||
|     std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME | ||||
|     std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl; | ||||
|     auto rhs_v = rhs.View(); | ||||
|     assert(0); // This will fail if hit on GPU | ||||
|     autoView( rhs_v, rhs, CpuWrite); | ||||
|     for(int n=0;n<e1;n++){ | ||||
|       for(int b=0;b<e2;b++){ | ||||
| 	int o      = n*rhs.Grid()->_slice_stride[dimension]; | ||||
| @@ -222,9 +297,34 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerA | ||||
|   } | ||||
| } | ||||
|  | ||||
| #if (defined(GRID_CUDA) || defined(GRID_HIP)) && defined(ACCELERATOR_CSHIFT) | ||||
|  | ||||
| template <typename T> | ||||
| T iDivUp(T a, T b) // Round a / b to nearest higher integer value | ||||
| { return (a % b != 0) ? (a / b + 1) : (a / b); } | ||||
|  | ||||
| template <typename T> | ||||
| __global__ void populate_Cshift_table(T* vector, T lo, T ro, T e1, T e2, T stride) | ||||
| { | ||||
|     int idx = blockIdx.x*blockDim.x + threadIdx.x; | ||||
|     if (idx >= e1*e2) return; | ||||
|  | ||||
|     int n, b, o; | ||||
|  | ||||
|     n = idx / e2; | ||||
|     b = idx % e2; | ||||
|     o = n*stride + b; | ||||
|  | ||||
|     vector[2*idx + 0] = lo + o; | ||||
|     vector[2*idx + 1] = ro + o; | ||||
| } | ||||
|  | ||||
| #endif | ||||
|  | ||||
| ////////////////////////////////////////////////////// | ||||
| // local to node block strided copies | ||||
| ////////////////////////////////////////////////////// | ||||
|  | ||||
| template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask) | ||||
| { | ||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||
| @@ -239,39 +339,58 @@ template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs | ||||
|   int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc | ||||
|   int e2=rhs.Grid()->_slice_block[dimension]; | ||||
|   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); | ||||
|  | ||||
|   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||
|  | ||||
|   int ent=0; | ||||
|  | ||||
|   if(cbmask == 0x3 ){ | ||||
| #if (defined(GRID_CUDA) || defined(GRID_HIP)) && defined(ACCELERATOR_CSHIFT) | ||||
|     ent = e1*e2; | ||||
|     dim3 blockSize(acceleratorThreads()); | ||||
|     dim3 gridSize(iDivUp((unsigned int)ent, blockSize.x)); | ||||
|     populate_Cshift_table<<<gridSize, blockSize>>>(&Cshift_table[0].first, lo, ro, e1, e2, stride); | ||||
|     accelerator_barrier(); | ||||
| #else | ||||
|     for(int n=0;n<e1;n++){ | ||||
|       for(int b=0;b<e2;b++){ | ||||
|         int o =n*stride+b; | ||||
| 	table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||
| 	Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||
|       } | ||||
|     } | ||||
| #endif | ||||
|   } else {  | ||||
|     for(int n=0;n<e1;n++){ | ||||
|       for(int b=0;b<e2;b++){ | ||||
|         int o =n*stride+b; | ||||
|         int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o); | ||||
|         if ( ocb&cbmask ) { | ||||
| 	  table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||
| 	  Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||
| 	} | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   { | ||||
|     auto table = &Cshift_table[0]; | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView(rhs_v , rhs, AcceleratorRead); | ||||
|     autoView(lhs_v , lhs, AcceleratorWrite); | ||||
|     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||
|       coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||
|     }); | ||||
| #else | ||||
|     autoView(rhs_v , rhs, CpuRead); | ||||
|     autoView(lhs_v , lhs, CpuWrite); | ||||
|     thread_for(i,ent,{ | ||||
|       lhs_v[table[i].first]=rhs_v[table[i].second]; | ||||
|     }); | ||||
|  | ||||
| #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type) | ||||
| { | ||||
|   | ||||
|   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||
|  | ||||
|   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||
| @@ -285,29 +404,49 @@ template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vo | ||||
|   int e2=rhs.Grid()->_slice_block [dimension]; | ||||
|   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||
|  | ||||
|   static std::vector<std::pair<int,int> > table;  table.resize(e1*e2); | ||||
|   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||
|  | ||||
|   int ent=0; | ||||
|  | ||||
|   if ( cbmask == 0x3 ) { | ||||
| #if (defined(GRID_CUDA) || defined(GRID_HIP)) && defined(ACCELERATOR_CSHIFT) | ||||
|     ent = e1*e2; | ||||
|     dim3 blockSize(acceleratorThreads()); | ||||
|     dim3 gridSize(iDivUp((unsigned int)ent, blockSize.x)); | ||||
|     populate_Cshift_table<<<gridSize, blockSize>>>(&Cshift_table[0].first, lo, ro, e1, e2, stride); | ||||
|     accelerator_barrier(); | ||||
| #else | ||||
|     for(int n=0;n<e1;n++){ | ||||
|     for(int b=0;b<e2;b++){ | ||||
|       int o  =n*stride; | ||||
|       table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||
|       Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||
|     }} | ||||
| #endif | ||||
|   } else { | ||||
|     for(int n=0;n<e1;n++){ | ||||
|     for(int b=0;b<e2;b++){ | ||||
|       int o  =n*stride; | ||||
|       int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b); | ||||
|       if ( ocb&cbmask ) table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||
|       if ( ocb&cbmask ) Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||
|     }} | ||||
|   } | ||||
|  | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   { | ||||
|     auto table = &Cshift_table[0]; | ||||
| #ifdef ACCELERATOR_CSHIFT     | ||||
|     autoView( rhs_v, rhs, AcceleratorRead); | ||||
|     autoView( lhs_v, lhs, AcceleratorWrite); | ||||
|     accelerator_for(i,ent,1,{ | ||||
|       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||
|     }); | ||||
| #else | ||||
|     autoView( rhs_v, rhs, CpuRead); | ||||
|     autoView( lhs_v, lhs, CpuWrite); | ||||
|     thread_for(i,ent,{ | ||||
|       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||
|     }); | ||||
| #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| ////////////////////////////////////////////////////// | ||||
|   | ||||
| @@ -101,7 +101,8 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob | ||||
|     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration | ||||
|   } | ||||
| } | ||||
|  | ||||
| #define ACCELERATOR_CSHIFT_NO_COPY | ||||
| #ifdef ACCELERATOR_CSHIFT_NO_COPY | ||||
| template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||
| { | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
| @@ -121,8 +122,8 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | ||||
|   assert(shift<fd); | ||||
|    | ||||
|   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||
|   commVector<vobj> send_buf(buffer_size); | ||||
|   commVector<vobj> recv_buf(buffer_size); | ||||
|   static cshiftVector<vobj> send_buf; send_buf.resize(buffer_size); | ||||
|   static cshiftVector<vobj> recv_buf; recv_buf.resize(buffer_size); | ||||
|      | ||||
|   int cb= (cbmask==0x2)? Odd : Even; | ||||
|   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||
| @@ -138,7 +139,7 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | ||||
|  | ||||
|     } else { | ||||
|  | ||||
|       int words = send_buf.size(); | ||||
|       int words = buffer_size; | ||||
|       if (cbmask != 0x3) words=words>>1; | ||||
|  | ||||
|       int bytes = words * sizeof(vobj); | ||||
| @@ -150,12 +151,14 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | ||||
|       int xmit_to_rank; | ||||
|       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||
|  | ||||
|       grid->Barrier(); | ||||
|  | ||||
|       grid->SendToRecvFrom((void *)&send_buf[0], | ||||
| 			   xmit_to_rank, | ||||
| 			   (void *)&recv_buf[0], | ||||
| 			   recv_from_rank, | ||||
| 			   bytes); | ||||
|  | ||||
|       grid->Barrier(); | ||||
|  | ||||
|       Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask); | ||||
| @@ -195,8 +198,15 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | ||||
|   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||
|   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||
|  | ||||
|   std::vector<commVector<scalar_object> >   send_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); | ||||
|   std::vector<commVector<scalar_object> >   recv_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); | ||||
|   static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd); | ||||
|   static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd); | ||||
|   scalar_object *  recv_buf_extract_mpi; | ||||
|   scalar_object *  send_buf_extract_mpi; | ||||
|   | ||||
|   for(int s=0;s<Nsimd;s++){ | ||||
|     send_buf_extract[s].resize(buffer_size); | ||||
|     recv_buf_extract[s].resize(buffer_size); | ||||
|   } | ||||
|  | ||||
|   int bytes = buffer_size*sizeof(scalar_object); | ||||
|  | ||||
| @@ -242,11 +252,204 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | ||||
|       if(nbr_proc){ | ||||
| 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||
|  | ||||
| 	grid->SendToRecvFrom((void *)&send_buf_extract[nbr_lane][0], | ||||
| 	grid->Barrier(); | ||||
|  | ||||
| 	send_buf_extract_mpi = &send_buf_extract[nbr_lane][0]; | ||||
| 	recv_buf_extract_mpi = &recv_buf_extract[i][0]; | ||||
| 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||
| 			     xmit_to_rank, | ||||
| 			     (void *)&recv_buf_extract[i][0], | ||||
| 			     (void *)recv_buf_extract_mpi, | ||||
| 			     recv_from_rank, | ||||
| 			     bytes); | ||||
|  | ||||
| 	grid->Barrier(); | ||||
|  | ||||
| 	rpointers[i] = &recv_buf_extract[i][0]; | ||||
|       } else {  | ||||
| 	rpointers[i] = &send_buf_extract[nbr_lane][0]; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|     Scatter_plane_merge(ret,rpointers,dimension,x,cbmask); | ||||
|   } | ||||
|  | ||||
| } | ||||
| #else  | ||||
| template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||
| { | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|  | ||||
|   GridBase *grid=rhs.Grid(); | ||||
|   Lattice<vobj> temp(rhs.Grid()); | ||||
|  | ||||
|   int fd              = rhs.Grid()->_fdimensions[dimension]; | ||||
|   int rd              = rhs.Grid()->_rdimensions[dimension]; | ||||
|   int pd              = rhs.Grid()->_processors[dimension]; | ||||
|   int simd_layout     = rhs.Grid()->_simd_layout[dimension]; | ||||
|   int comm_dim        = rhs.Grid()->_processors[dimension] >1 ; | ||||
|   assert(simd_layout==1); | ||||
|   assert(comm_dim==1); | ||||
|   assert(shift>=0); | ||||
|   assert(shift<fd); | ||||
|    | ||||
|   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||
|   static cshiftVector<vobj> send_buf_v; send_buf_v.resize(buffer_size); | ||||
|   static cshiftVector<vobj> recv_buf_v; recv_buf_v.resize(buffer_size); | ||||
|   vobj *send_buf; | ||||
|   vobj *recv_buf; | ||||
|   { | ||||
|     grid->ShmBufferFreeAll(); | ||||
|     size_t bytes = buffer_size*sizeof(vobj); | ||||
|     send_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||
|     recv_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||
|   } | ||||
|      | ||||
|   int cb= (cbmask==0x2)? Odd : Even; | ||||
|   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||
|  | ||||
|   for(int x=0;x<rd;x++){        | ||||
|  | ||||
|     int sx        =  (x+sshift)%rd; | ||||
|     int comm_proc = ((x+sshift)/rd)%pd; | ||||
|      | ||||
|     if (comm_proc==0) { | ||||
|  | ||||
|       Copy_plane(ret,rhs,dimension,x,sx,cbmask);  | ||||
|  | ||||
|     } else { | ||||
|  | ||||
|       int words = buffer_size; | ||||
|       if (cbmask != 0x3) words=words>>1; | ||||
|  | ||||
|       int bytes = words * sizeof(vobj); | ||||
|  | ||||
|       Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask); | ||||
|  | ||||
|       //      int rank           = grid->_processor; | ||||
|       int recv_from_rank; | ||||
|       int xmit_to_rank; | ||||
|       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||
|  | ||||
|  | ||||
|       grid->Barrier(); | ||||
|  | ||||
|       acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes); | ||||
|       grid->SendToRecvFrom((void *)&send_buf[0], | ||||
| 			   xmit_to_rank, | ||||
| 			   (void *)&recv_buf[0], | ||||
| 			   recv_from_rank, | ||||
| 			   bytes); | ||||
|       acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes); | ||||
|  | ||||
|       grid->Barrier(); | ||||
|  | ||||
|       Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask); | ||||
|     } | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||
| { | ||||
|   GridBase *grid=rhs.Grid(); | ||||
|   const int Nsimd = grid->Nsimd(); | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|   typedef typename vobj::scalar_object scalar_object; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|     | ||||
|   int fd = grid->_fdimensions[dimension]; | ||||
|   int rd = grid->_rdimensions[dimension]; | ||||
|   int ld = grid->_ldimensions[dimension]; | ||||
|   int pd = grid->_processors[dimension]; | ||||
|   int simd_layout     = grid->_simd_layout[dimension]; | ||||
|   int comm_dim        = grid->_processors[dimension] >1 ; | ||||
|  | ||||
|   //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd | ||||
|   //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout  | ||||
|   //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl; | ||||
|  | ||||
|   assert(comm_dim==1); | ||||
|   assert(simd_layout==2); | ||||
|   assert(shift>=0); | ||||
|   assert(shift<fd); | ||||
|  | ||||
|   int permute_type=grid->PermuteType(dimension); | ||||
|  | ||||
|   /////////////////////////////////////////////// | ||||
|   // Simd direction uses an extract/merge pair | ||||
|   /////////////////////////////////////////////// | ||||
|   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||
|   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||
|  | ||||
|   static std::vector<cshiftVector<scalar_object> >  send_buf_extract; send_buf_extract.resize(Nsimd); | ||||
|   static std::vector<cshiftVector<scalar_object> >  recv_buf_extract; recv_buf_extract.resize(Nsimd); | ||||
|   scalar_object *  recv_buf_extract_mpi; | ||||
|   scalar_object *  send_buf_extract_mpi; | ||||
|   { | ||||
|     size_t bytes = sizeof(scalar_object)*buffer_size; | ||||
|     grid->ShmBufferFreeAll(); | ||||
|     send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||
|     recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||
|   } | ||||
|   for(int s=0;s<Nsimd;s++){ | ||||
|     send_buf_extract[s].resize(buffer_size); | ||||
|     recv_buf_extract[s].resize(buffer_size); | ||||
|   } | ||||
|  | ||||
|   int bytes = buffer_size*sizeof(scalar_object); | ||||
|  | ||||
|   ExtractPointerArray<scalar_object>  pointers(Nsimd); //  | ||||
|   ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers | ||||
|  | ||||
|   /////////////////////////////////////////// | ||||
|   // Work out what to send where | ||||
|   /////////////////////////////////////////// | ||||
|   int cb    = (cbmask==0x2)? Odd : Even; | ||||
|   int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||
|  | ||||
|   // loop over outer coord planes orthog to dim | ||||
|   for(int x=0;x<rd;x++){        | ||||
|  | ||||
|     // FIXME call local permute copy if none are offnode. | ||||
|     for(int i=0;i<Nsimd;i++){        | ||||
|       pointers[i] = &send_buf_extract[i][0]; | ||||
|     } | ||||
|     int sx   = (x+sshift)%rd; | ||||
|     Gather_plane_extract(rhs,pointers,dimension,sx,cbmask); | ||||
|  | ||||
|     for(int i=0;i<Nsimd;i++){ | ||||
|        | ||||
|       int inner_bit = (Nsimd>>(permute_type+1)); | ||||
|       int ic= (i&inner_bit)? 1:0; | ||||
|  | ||||
|       int my_coor          = rd*ic + x; | ||||
|       int nbr_coor         = my_coor+sshift; | ||||
|       int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors | ||||
|  | ||||
|       int nbr_ic   = (nbr_coor%ld)/rd;    // inner coord of peer | ||||
|       int nbr_ox   = (nbr_coor%rd);       // outer coord of peer | ||||
|       int nbr_lane = (i&(~inner_bit)); | ||||
|  | ||||
|       int recv_from_rank; | ||||
|       int xmit_to_rank; | ||||
|  | ||||
|       if (nbr_ic) nbr_lane|=inner_bit; | ||||
|  | ||||
|       assert (sx == nbr_ox); | ||||
|  | ||||
|       if(nbr_proc){ | ||||
| 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||
|  | ||||
| 	grid->Barrier(); | ||||
|  | ||||
| 	acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes); | ||||
| 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||
| 			     xmit_to_rank, | ||||
| 			     (void *)recv_buf_extract_mpi, | ||||
| 			     recv_from_rank, | ||||
| 			     bytes); | ||||
| 	acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes); | ||||
|  | ||||
| 	grid->Barrier(); | ||||
| 	rpointers[i] = &recv_buf_extract[i][0]; | ||||
|       } else {  | ||||
| @@ -258,7 +461,7 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | ||||
|   } | ||||
|  | ||||
| } | ||||
|  | ||||
| #endif | ||||
| NAMESPACE_END(Grid);  | ||||
|  | ||||
| #endif | ||||
|   | ||||
							
								
								
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | ||||
| #include <Grid/GridCore.h>        | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| Vector<std::pair<int,int> > Cshift_table;  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										23539
									
								
								Grid/json/json.hpp
									
									
									
									
									
								
							
							
						
						
									
										23539
									
								
								Grid/json/json.hpp
									
									
									
									
									
								
							
										
											
												File diff suppressed because it is too large
												Load Diff
											
										
									
								
							| @@ -26,6 +26,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #pragma once | ||||
| #include <Grid/lattice/Lattice_view.h> | ||||
| #include <Grid/lattice/Lattice_base.h> | ||||
| #include <Grid/lattice/Lattice_conformable.h> | ||||
| #include <Grid/lattice/Lattice_ET.h> | ||||
| @@ -36,6 +37,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/lattice/Lattice_reduction.h> | ||||
| #include <Grid/lattice/Lattice_peekpoke.h> | ||||
| #include <Grid/lattice/Lattice_reality.h> | ||||
| #include <Grid/lattice/Lattice_real_imag.h> | ||||
| #include <Grid/lattice/Lattice_comparison_utils.h> | ||||
| #include <Grid/lattice/Lattice_comparison.h> | ||||
| #include <Grid/lattice/Lattice_coordinate.h> | ||||
| @@ -43,4 +45,5 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/lattice/Lattice_rng.h> | ||||
| #include <Grid/lattice/Lattice_unary.h> | ||||
| #include <Grid/lattice/Lattice_transfer.h> | ||||
|  | ||||
| #include <Grid/lattice/Lattice_basis.h> | ||||
| #include <Grid/lattice/Lattice_crc.h> | ||||
|   | ||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: neo <cossu@post.kek.jp> | ||||
| Author: Christoph Lehner <christoph@lhnr.de | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| @@ -41,13 +42,28 @@ NAMESPACE_BEGIN(Grid); | ||||
| //////////////////////////////////////////////////// | ||||
| // Predicated where support | ||||
| //////////////////////////////////////////////////// | ||||
| #ifdef GRID_SIMT | ||||
| // drop to scalar in SIMT; cleaner in fact | ||||
| template <class iobj, class vobj, class robj> | ||||
| accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, | ||||
|                             const robj &iffalse) { | ||||
| accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||
| 					const vobj &iftrue,  | ||||
| 					const robj &iffalse)  | ||||
| { | ||||
|   Integer mask = TensorRemove(predicate); | ||||
|   typename std::remove_const<vobj>::type ret= iffalse; | ||||
|   if (mask) ret=iftrue; | ||||
|   return ret; | ||||
| } | ||||
| #else | ||||
| template <class iobj, class vobj, class robj> | ||||
| accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||
| 					const vobj &iftrue,  | ||||
| 					const robj &iffalse)  | ||||
| { | ||||
|   typename std::remove_const<vobj>::type ret; | ||||
|  | ||||
|   typedef typename vobj::scalar_object scalar_object; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   //  typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   const int Nsimd = vobj::vector_type::Nsimd(); | ||||
| @@ -67,6 +83,7 @@ accelerator_inline vobj predicatedWhere(const iobj &predicate, const vobj &iftru | ||||
|   merge(ret, falsevals); | ||||
|   return ret; | ||||
| } | ||||
| #endif | ||||
|  | ||||
| ///////////////////////////////////////////////////// | ||||
| //Specialization of getVectorType for lattices | ||||
| @@ -80,26 +97,62 @@ struct getVectorType<Lattice<T> >{ | ||||
| //--  recursive evaluation of expressions; -- | ||||
| // handle leaves of syntax tree | ||||
| /////////////////////////////////////////////////// | ||||
| template<class sobj> accelerator_inline  | ||||
| template<class sobj, | ||||
|   typename std::enable_if<!is_lattice<sobj>::value&&!is_lattice_expr<sobj>::value,sobj>::type * = nullptr>  | ||||
| accelerator_inline  | ||||
| sobj eval(const uint64_t ss, const sobj &arg) | ||||
| { | ||||
|   return arg; | ||||
| } | ||||
|  | ||||
| template <class lobj> accelerator_inline  | ||||
| const lobj & eval(const uint64_t ss, const LatticeView<lobj> &arg)  | ||||
| auto eval(const uint64_t ss, const LatticeView<lobj> &arg) -> decltype(arg(ss)) | ||||
| { | ||||
|   return arg[ss]; | ||||
|   return arg(ss); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////// | ||||
| //--  recursive evaluation of expressions; -- | ||||
| // whole vector return, used only for expression return type inference | ||||
| /////////////////////////////////////////////////// | ||||
| template<class sobj> accelerator_inline  | ||||
| sobj vecEval(const uint64_t ss, const sobj &arg) | ||||
| { | ||||
|   return arg; | ||||
| } | ||||
| template <class lobj> accelerator_inline  | ||||
| const lobj & eval(const uint64_t ss, const Lattice<lobj> &arg)  | ||||
| const lobj & vecEval(const uint64_t ss, const LatticeView<lobj> &arg)  | ||||
| { | ||||
|   auto view = arg.View(); | ||||
|   return view[ss]; | ||||
|   return arg[ss]; | ||||
| } | ||||
|  | ||||
| /////////////////////////////////////////////////// | ||||
| // handle nodes in syntax tree- eval one operand | ||||
| // vecEval needed (but never called as all expressions offloaded) to infer the return type | ||||
| // in SIMT contexts of closure. | ||||
| /////////////////////////////////////////////////// | ||||
| template <typename Op, typename T1> accelerator_inline  | ||||
| auto vecEval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||
|   -> decltype(expr.op.func( vecEval(ss, expr.arg1))) | ||||
| { | ||||
|   return expr.op.func( vecEval(ss, expr.arg1) ); | ||||
| } | ||||
| // vecEval two operands | ||||
| template <typename Op, typename T1, typename T2> accelerator_inline | ||||
| auto vecEval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||
|   -> decltype(expr.op.func( vecEval(ss,expr.arg1),vecEval(ss,expr.arg2))) | ||||
| { | ||||
|   return expr.op.func( vecEval(ss,expr.arg1), vecEval(ss,expr.arg2) ); | ||||
| } | ||||
| // vecEval three operands | ||||
| template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||
| auto vecEval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||
|   -> decltype(expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3))) | ||||
| { | ||||
|   return expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3)); | ||||
| } | ||||
|  | ||||
| /////////////////////////////////////////////////// | ||||
| // handle nodes in syntax tree- eval one operand coalesced | ||||
| /////////////////////////////////////////////////// | ||||
| template <typename Op, typename T1> accelerator_inline  | ||||
| auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||
| @@ -107,23 +160,41 @@ auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr) | ||||
| { | ||||
|   return expr.op.func( eval(ss, expr.arg1) ); | ||||
| } | ||||
| /////////////////////// | ||||
| // eval two operands | ||||
| /////////////////////// | ||||
| template <typename Op, typename T1, typename T2> accelerator_inline | ||||
| auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||
|   -> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2))) | ||||
| { | ||||
|   return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) ); | ||||
| } | ||||
| /////////////////////// | ||||
| // eval three operands | ||||
| /////////////////////// | ||||
| template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||
| auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||
|   -> decltype(expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3))) | ||||
|   -> decltype(expr.op.func(eval(ss, expr.arg1),  | ||||
| 			   eval(ss, expr.arg2),  | ||||
| 			   eval(ss, expr.arg3))) | ||||
| { | ||||
|   return expr.op.func(eval(ss, expr.arg1), eval(ss, expr.arg2), eval(ss, expr.arg3)); | ||||
| #ifdef GRID_SIMT | ||||
|   // Handles Nsimd (vInteger) != Nsimd(ComplexD) | ||||
|   typedef decltype(vecEval(ss, expr.arg2)) rvobj; | ||||
|   typedef typename std::remove_reference<rvobj>::type vobj; | ||||
|  | ||||
|   const int Nsimd = vobj::vector_type::Nsimd(); | ||||
|  | ||||
|   auto vpred = vecEval(ss,expr.arg1); | ||||
|  | ||||
|   ExtractBuffer<Integer> mask(Nsimd); | ||||
|   extract<vInteger, Integer>(TensorRemove(vpred), mask); | ||||
|  | ||||
|   int s = acceleratorSIMTlane(Nsimd); | ||||
|   return expr.op.func(mask[s], | ||||
| 		      eval(ss, expr.arg2),  | ||||
| 		      eval(ss, expr.arg3)); | ||||
| #else | ||||
|   return expr.op.func(eval(ss, expr.arg1), | ||||
| 		      eval(ss, expr.arg2),  | ||||
| 		      eval(ss, expr.arg3)); | ||||
| #endif | ||||
| } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| @@ -179,16 +250,12 @@ inline void CBFromExpression(int &cb, const T1 &lat)  // Lattice leaf | ||||
|   cb = lat.Checkerboard(); | ||||
| } | ||||
| template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||
| inline void CBFromExpression(int &cb, const T1 ¬lat)  // non-lattice leaf | ||||
| { | ||||
| } | ||||
|  | ||||
| inline void CBFromExpression(int &cb, const T1 ¬lat) {} // non-lattice leaf | ||||
| template <typename Op, typename T1> inline  | ||||
| void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr)  | ||||
| { | ||||
|   CBFromExpression(cb, expr.arg1);  // recurse AST | ||||
| } | ||||
|  | ||||
| template <typename Op, typename T1, typename T2> inline  | ||||
| void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||
| { | ||||
| @@ -203,32 +270,86 @@ inline void CBFromExpression(int &cb, const LatticeTrinaryExpression<Op, T1, T2, | ||||
|   CBFromExpression(cb, expr.arg3);  // recurse AST | ||||
| } | ||||
|  | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| // ViewOpen | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||
| inline void ExpressionViewOpen(T1 &lat)  // Lattice leaf | ||||
| { | ||||
|   lat.ViewOpen(AcceleratorRead); | ||||
| } | ||||
| template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||
|   inline void ExpressionViewOpen(T1 ¬lat) {} | ||||
|  | ||||
| template <typename Op, typename T1> inline  | ||||
| void ExpressionViewOpen(LatticeUnaryExpression<Op, T1> &expr)  | ||||
| {   | ||||
|   ExpressionViewOpen(expr.arg1); // recurse AST | ||||
| } | ||||
|  | ||||
| template <typename Op, typename T1, typename T2> inline  | ||||
| void ExpressionViewOpen(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||
| { | ||||
|   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||
|   ExpressionViewOpen(expr.arg2);  // rrecurse AST | ||||
| } | ||||
| template <typename Op, typename T1, typename T2, typename T3> | ||||
| inline void ExpressionViewOpen(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||
| { | ||||
|   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||
|   ExpressionViewOpen(expr.arg2);  // recurse AST | ||||
|   ExpressionViewOpen(expr.arg3);  // recurse AST | ||||
| } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| // ViewClose | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||
| inline void ExpressionViewClose( T1 &lat)  // Lattice leaf | ||||
| { | ||||
|   lat.ViewClose(); | ||||
| } | ||||
| template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||
| inline void ExpressionViewClose(T1 ¬lat) {} | ||||
|  | ||||
| template <typename Op, typename T1> inline  | ||||
| void ExpressionViewClose(LatticeUnaryExpression<Op, T1> &expr)  | ||||
| {   | ||||
|   ExpressionViewClose(expr.arg1); // recurse AST | ||||
| } | ||||
| template <typename Op, typename T1, typename T2> inline  | ||||
| void ExpressionViewClose(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||
| { | ||||
|   ExpressionViewClose(expr.arg1);  // recurse AST | ||||
|   ExpressionViewClose(expr.arg2);  // recurse AST | ||||
| } | ||||
| template <typename Op, typename T1, typename T2, typename T3> | ||||
| inline void ExpressionViewClose(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||
| { | ||||
|   ExpressionViewClose(expr.arg1);  // recurse AST | ||||
|   ExpressionViewClose(expr.arg2);  // recurse AST | ||||
|   ExpressionViewClose(expr.arg3);  // recurse AST | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////// | ||||
| // Unary operators and funcs | ||||
| //////////////////////////////////////////// | ||||
| #define GridUnopClass(name, ret)					\ | ||||
|   template <class arg>							\ | ||||
|   struct name {								\ | ||||
|     static auto accelerator_inline func(const arg a) -> decltype(ret) { return ret; } \ | ||||
|     template<class _arg> static auto accelerator_inline func(const _arg a) -> decltype(ret) { return ret; } \ | ||||
|   }; | ||||
|  | ||||
| GridUnopClass(UnarySub, -a); | ||||
| GridUnopClass(UnaryNot, Not(a)); | ||||
| GridUnopClass(UnaryAdj, adj(a)); | ||||
| GridUnopClass(UnaryConj, conjugate(a)); | ||||
| GridUnopClass(UnaryTrace, trace(a)); | ||||
| GridUnopClass(UnaryTranspose, transpose(a)); | ||||
| GridUnopClass(UnaryTa, Ta(a)); | ||||
| GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a)); | ||||
| GridUnopClass(UnaryReal, real(a)); | ||||
| GridUnopClass(UnaryImag, imag(a)); | ||||
| GridUnopClass(UnaryToReal, toReal(a)); | ||||
| GridUnopClass(UnaryToComplex, toComplex(a)); | ||||
| GridUnopClass(UnaryTimesI, timesI(a)); | ||||
| GridUnopClass(UnaryTimesMinusI, timesMinusI(a)); | ||||
| GridUnopClass(UnaryAbs, abs(a)); | ||||
| GridUnopClass(UnarySqrt, sqrt(a)); | ||||
| GridUnopClass(UnaryRsqrt, rsqrt(a)); | ||||
| GridUnopClass(UnarySin, sin(a)); | ||||
| GridUnopClass(UnaryCos, cos(a)); | ||||
| GridUnopClass(UnaryAsin, asin(a)); | ||||
| @@ -240,10 +361,10 @@ GridUnopClass(UnaryExp, exp(a)); | ||||
| // Binary operators | ||||
| //////////////////////////////////////////// | ||||
| #define GridBinOpClass(name, combination)			\ | ||||
|   template <class left, class right>				\ | ||||
|   struct name {							\ | ||||
|     template <class _left, class _right>			\ | ||||
|     static auto accelerator_inline				\ | ||||
|     func(const left &lhs, const right &rhs)			\ | ||||
|     func(const _left &lhs, const _right &rhs)			\ | ||||
|       -> decltype(combination) const				\ | ||||
|     {								\ | ||||
|       return combination;					\ | ||||
| @@ -263,10 +384,10 @@ GridBinOpClass(BinaryOrOr, lhs || rhs); | ||||
| // Trinary conditional op | ||||
| //////////////////////////////////////////////////// | ||||
| #define GridTrinOpClass(name, combination)				\ | ||||
|   template <class predicate, class left, class right>			\ | ||||
|   struct name {								\ | ||||
|     template <class _predicate,class _left, class _right>		\ | ||||
|     static auto accelerator_inline					\ | ||||
|     func(const predicate &pred, const left &lhs, const right &rhs)	\ | ||||
|     func(const _predicate &pred, const _left &lhs, const _right &rhs)	\ | ||||
|       -> decltype(combination) const					\ | ||||
|     {									\ | ||||
|       return combination;						\ | ||||
| @@ -274,17 +395,17 @@ GridBinOpClass(BinaryOrOr, lhs || rhs); | ||||
|   }; | ||||
|  | ||||
| GridTrinOpClass(TrinaryWhere, | ||||
| 		(predicatedWhere<predicate,  | ||||
| 		 typename std::remove_reference<left>::type, | ||||
| 		 typename std::remove_reference<right>::type>(pred, lhs,rhs))); | ||||
| 		(predicatedWhere< | ||||
| 		 typename std::remove_reference<_predicate>::type,  | ||||
| 		 typename std::remove_reference<_left>::type, | ||||
| 		 typename std::remove_reference<_right>::type>(pred, lhs,rhs))); | ||||
|  | ||||
| //////////////////////////////////////////// | ||||
| // Operator syntactical glue | ||||
| //////////////////////////////////////////// | ||||
|  | ||||
| #define GRID_UNOP(name)   name<decltype(eval(0, arg))> | ||||
| #define GRID_BINOP(name)  name<decltype(eval(0, lhs)), decltype(eval(0, rhs))> | ||||
| #define GRID_TRINOP(name) name<decltype(eval(0, pred)), decltype(eval(0, lhs)), decltype(eval(0, rhs))> | ||||
| #define GRID_UNOP(name)   name | ||||
| #define GRID_BINOP(name)  name | ||||
| #define GRID_TRINOP(name) name | ||||
|  | ||||
| #define GRID_DEF_UNOP(op, name)						\ | ||||
|   template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \ | ||||
| @@ -330,22 +451,17 @@ GridTrinOpClass(TrinaryWhere, | ||||
| GRID_DEF_UNOP(operator-, UnarySub); | ||||
| GRID_DEF_UNOP(Not, UnaryNot); | ||||
| GRID_DEF_UNOP(operator!, UnaryNot); | ||||
| GRID_DEF_UNOP(adj, UnaryAdj); | ||||
| GRID_DEF_UNOP(conjugate, UnaryConj); | ||||
| //GRID_DEF_UNOP(adj, UnaryAdj); | ||||
| //GRID_DEF_UNOP(conjugate, UnaryConj); | ||||
| GRID_DEF_UNOP(trace, UnaryTrace); | ||||
| GRID_DEF_UNOP(transpose, UnaryTranspose); | ||||
| GRID_DEF_UNOP(Ta, UnaryTa); | ||||
| GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup); | ||||
| GRID_DEF_UNOP(real, UnaryReal); | ||||
| GRID_DEF_UNOP(imag, UnaryImag); | ||||
| GRID_DEF_UNOP(toReal, UnaryToReal); | ||||
| GRID_DEF_UNOP(toComplex, UnaryToComplex); | ||||
| GRID_DEF_UNOP(timesI, UnaryTimesI); | ||||
| GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI); | ||||
| GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the | ||||
|                                // abs-fabs-dabs-labs thing | ||||
| GRID_DEF_UNOP(sqrt, UnarySqrt); | ||||
| GRID_DEF_UNOP(rsqrt, UnaryRsqrt); | ||||
| GRID_DEF_UNOP(sin, UnarySin); | ||||
| GRID_DEF_UNOP(cos, UnaryCos); | ||||
| GRID_DEF_UNOP(asin, UnaryAsin); | ||||
| @@ -370,29 +486,36 @@ GRID_DEF_TRINOP(where, TrinaryWhere); | ||||
| ///////////////////////////////////////////////////////////// | ||||
| template <class Op, class T1> | ||||
| auto closure(const LatticeUnaryExpression<Op, T1> &expr) | ||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1)))>  | ||||
|   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type >  | ||||
| { | ||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1)))> ret(expr); | ||||
|   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > ret(expr); | ||||
|   return ret; | ||||
| } | ||||
| template <class Op, class T1, class T2> | ||||
| auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr) | ||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))>  | ||||
|   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > | ||||
| { | ||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1),eval(0, expr.arg2)))> ret(expr); | ||||
|   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > ret(expr); | ||||
|   return ret; | ||||
| } | ||||
| template <class Op, class T1, class T2, class T3> | ||||
| auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | ||||
|   -> Lattice<decltype(expr.op.func(eval(0, expr.arg1), | ||||
| 				   eval(0, expr.arg2), | ||||
| 				   eval(0, expr.arg3)))>  | ||||
|   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||
| 				   vecEval(0, expr.arg2), | ||||
| 				   vecEval(0, expr.arg3)))>::type > | ||||
| { | ||||
|   Lattice<decltype(expr.op.func(eval(0, expr.arg1), | ||||
| 				eval(0, expr.arg2), | ||||
| 				eval(0, expr.arg3)))>  ret(expr); | ||||
|   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||
| 				vecEval(0, expr.arg2), | ||||
| 			        vecEval(0, expr.arg3)))>::type >  ret(expr); | ||||
|   return ret; | ||||
| } | ||||
| #define EXPRESSION_CLOSURE(function)					\ | ||||
|   template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> \ | ||||
|     auto function(Expression &expr) -> decltype(function(closure(expr))) \ | ||||
|   {									\ | ||||
|     return function(closure(expr));					\ | ||||
|   } | ||||
|  | ||||
|  | ||||
| #undef GRID_UNOP | ||||
| #undef GRID_BINOP | ||||
|   | ||||
| @@ -7,6 +7,7 @@ | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -35,10 +36,11 @@ NAMESPACE_BEGIN(Grid); | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("mult"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   conformable(ret,rhs); | ||||
|   conformable(lhs,rhs); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
| @@ -52,16 +54,17 @@ void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("mac"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   conformable(lhs,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto lhs_t=lhs_v(ss); | ||||
|     auto rhs_t=rhs_v(ss); | ||||
|     auto tmp  =ret_v(ss); | ||||
|     mac(&tmp,&lhs_t,&rhs_t); | ||||
|     coalescedWrite(ret_v[ss],tmp); | ||||
|   }); | ||||
| @@ -69,12 +72,13 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("sub"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   conformable(lhs,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto lhs_t=lhs_v(ss); | ||||
| @@ -85,12 +89,13 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
| } | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("add"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   conformable(lhs,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto lhs_t=lhs_v(ss); | ||||
| @@ -105,10 +110,11 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|   GRID_TRACE("mult"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(lhs,ret); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     mult(&tmp,&lhs_v(ss),&rhs); | ||||
| @@ -118,12 +124,13 @@ void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|   GRID_TRACE("mac"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(ret,lhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto tmp  =ret_v(ss); | ||||
|     auto lhs_t=lhs_v(ss); | ||||
|     mac(&tmp,&lhs_t,&rhs); | ||||
|     coalescedWrite(ret_v[ss],tmp); | ||||
| @@ -132,10 +139,11 @@ void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|   GRID_TRACE("sub"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(ret,lhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto lhs_t=lhs_v(ss); | ||||
| @@ -145,10 +153,11 @@ void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
| } | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
|   GRID_TRACE("add"); | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   conformable(lhs,ret); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto lhs_t=lhs_v(ss); | ||||
| @@ -162,10 +171,11 @@ void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("mult"); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto rhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( rhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto rhs_t=rhs_v(ss); | ||||
| @@ -176,12 +186,13 @@ void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("mac"); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto rhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( rhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto tmp  =ret_v(ss); | ||||
|     auto rhs_t=rhs_v(ss); | ||||
|     mac(&tmp,&lhs,&rhs_t); | ||||
|     coalescedWrite(ret_v[ss],tmp); | ||||
| @@ -190,10 +201,11 @@ void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|    | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("sub"); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto rhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( rhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto rhs_t=rhs_v(ss); | ||||
| @@ -203,10 +215,11 @@ void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
| } | ||||
| template<class obj1,class obj2,class obj3> inline | ||||
| void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|   GRID_TRACE("add"); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   conformable(ret,rhs); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto rhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( rhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||
|     decltype(coalescedRead(obj1())) tmp; | ||||
|     auto rhs_t=rhs_v(ss); | ||||
| @@ -217,25 +230,27 @@ void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||
|    | ||||
| template<class sobj,class vobj> inline | ||||
| void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y){ | ||||
|   GRID_TRACE("axpy"); | ||||
|   ret.Checkerboard() = x.Checkerboard(); | ||||
|   conformable(ret,x); | ||||
|   conformable(x,y); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto x_v = x.View(); | ||||
|   auto y_v = y.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( x_v , x, AcceleratorRead); | ||||
|   autoView( y_v , y, AcceleratorRead); | ||||
|   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||
|     auto tmp = a*x_v(ss)+y_v(ss); | ||||
|     auto tmp = a*coalescedRead(x_v[ss])+coalescedRead(y_v[ss]); | ||||
|     coalescedWrite(ret_v[ss],tmp); | ||||
|   }); | ||||
| } | ||||
| template<class sobj,class vobj> inline | ||||
| void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y){ | ||||
|   GRID_TRACE("axpby"); | ||||
|   ret.Checkerboard() = x.Checkerboard(); | ||||
|   conformable(ret,x); | ||||
|   conformable(x,y); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto x_v = x.View(); | ||||
|   auto y_v = y.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( x_v , x, AcceleratorRead); | ||||
|   autoView( y_v , y, AcceleratorRead); | ||||
|   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||
|     auto tmp = a*x_v(ss)+b*y_v(ss); | ||||
|     coalescedWrite(ret_v[ss],tmp); | ||||
| @@ -245,11 +260,13 @@ void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice | ||||
| template<class sobj,class vobj> inline | ||||
| RealD axpy_norm(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y) | ||||
| { | ||||
|   GRID_TRACE("axpy_norm"); | ||||
|     return axpy_norm_fast(ret,a,x,y); | ||||
| } | ||||
| template<class sobj,class vobj> inline | ||||
| RealD axpby_norm(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y) | ||||
| { | ||||
|   GRID_TRACE("axpby_norm"); | ||||
|     return axpby_norm_fast(ret,a,b,x,y); | ||||
| } | ||||
|  | ||||
|   | ||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| @@ -28,6 +29,7 @@ See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| 			   /*  END LEGAL */ | ||||
|  | ||||
| #pragma once  | ||||
|  | ||||
| #define STREAMING_STORES | ||||
| @@ -36,129 +38,6 @@ NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| extern int GridCshiftPermuteMap[4][16]; | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| // Base class which can be used by traits to pick up behaviour | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| class LatticeBase {}; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Conformable checks; same instance of Grid required | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| void accelerator_inline conformable(GridBase *lhs,GridBase *rhs) | ||||
| { | ||||
|   assert(lhs == rhs); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Minimal base class containing only data valid to access from accelerator | ||||
| // _odata will be a managed pointer in CUDA | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Force access to lattice through a view object. | ||||
| // prevents writing of code that will not offload to GPU, but perhaps annoyingly | ||||
| // strict since host could could in principle direct access through the lattice object | ||||
| // Need to decide programming model. | ||||
| #define LATTICE_VIEW_STRICT | ||||
| template<class vobj> class LatticeAccelerator : public LatticeBase | ||||
| { | ||||
| protected: | ||||
|   GridBase *_grid; | ||||
|   int checkerboard; | ||||
|   vobj     *_odata;    // A managed pointer | ||||
|   uint64_t _odata_size;     | ||||
| public: | ||||
|   accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr) { };  | ||||
|   accelerator_inline uint64_t oSites(void) const { return _odata_size; }; | ||||
|   accelerator_inline int  Checkerboard(void) const { return checkerboard; }; | ||||
|   accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view | ||||
|   accelerator_inline void Conformable(GridBase * &grid) const | ||||
|   {  | ||||
|     if (grid) conformable(grid, _grid); | ||||
|     else      grid = _grid; | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // A View class which provides accessor to the data. | ||||
| // This will be safe to call from accelerator_for and is trivially copy constructible | ||||
| // The copy constructor for this will need to be used by device lambda functions | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class vobj>  | ||||
| class LatticeView : public LatticeAccelerator<vobj> | ||||
| { | ||||
| public: | ||||
|  | ||||
|  | ||||
|   // Rvalue | ||||
| #ifdef __CUDA_ARCH__ | ||||
|   accelerator_inline const typename vobj::scalar_object operator()(size_t i) const { return coalescedRead(this->_odata[i]); } | ||||
| #else  | ||||
|   accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; } | ||||
| #endif | ||||
|  | ||||
|   accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; | ||||
|   accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; }; | ||||
|  | ||||
|   accelerator_inline uint64_t begin(void) const { return 0;}; | ||||
|   accelerator_inline uint64_t end(void)   const { return this->_odata_size; }; | ||||
|   accelerator_inline uint64_t size(void)  const { return this->_odata_size; }; | ||||
|  | ||||
|   LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me) | ||||
|   { | ||||
|   } | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Lattice expression types used by ET to assemble the AST | ||||
| //  | ||||
| // Need to be able to detect code paths according to the whether a lattice object or not | ||||
| // so introduce some trait type things | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| class LatticeExpressionBase {}; | ||||
|  | ||||
| template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>; | ||||
| template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >; | ||||
|  | ||||
| template<class T, bool isLattice> struct ViewMapBase { typedef T Type; }; | ||||
| template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; }; | ||||
| template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >; | ||||
|  | ||||
| template <typename Op, typename _T1>                            | ||||
| class LatticeUnaryExpression : public  LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {}; | ||||
| }; | ||||
|  | ||||
| template <typename Op, typename _T1, typename _T2>               | ||||
| class LatticeBinaryExpression : public LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   typedef typename ViewMap<_T2>::Type T2; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   T2 arg2; | ||||
|   LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {}; | ||||
| }; | ||||
|  | ||||
| template <typename Op, typename _T1, typename _T2, typename _T3>  | ||||
| class LatticeTrinaryExpression : public LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   typedef typename ViewMap<_T2>::Type T2; | ||||
|   typedef typename ViewMap<_T3>::Type T3; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   T2 arg2; | ||||
|   T3 arg3; | ||||
|   LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {}; | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // The real lattice class, with normal copy and assignment semantics. | ||||
| // This contains extra (host resident) grid pointer data that may be accessed by host code | ||||
| @@ -201,14 +80,30 @@ private: | ||||
|     } | ||||
|   } | ||||
| public: | ||||
|  | ||||
|   ///////////////////////////////////////////////////////////////////////////////// | ||||
|   // Can use to make accelerator dirty without copy from host ; useful for temporaries "dont care" prev contents | ||||
|   ///////////////////////////////////////////////////////////////////////////////// | ||||
|   void SetViewMode(ViewMode mode) { | ||||
|     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||
|     accessor.ViewClose(); | ||||
|   } | ||||
|  | ||||
|   // Helper function to print the state of this object in the AccCache | ||||
|   void PrintCacheState(void) | ||||
|   { | ||||
|     MemoryManager::PrintState(this->_odata); | ||||
|   } | ||||
|  | ||||
|   ///////////////////////////////////////////////////////////////////////////////// | ||||
|   // Return a view object that may be dereferenced in site loops. | ||||
|   // The view is trivially copy constructible and may be copied to an accelerator device | ||||
|   // in device lambdas | ||||
|   ///////////////////////////////////////////////////////////////////////////////// | ||||
|   LatticeView<vobj> View (void) const  | ||||
|  | ||||
|   LatticeView<vobj> View (ViewMode mode) const  | ||||
|   { | ||||
|     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this)); | ||||
|     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||
|     return accessor; | ||||
|   } | ||||
|  | ||||
| @@ -222,6 +117,7 @@ public: | ||||
|   //////////////////////////////////////////////////////////////////////////////// | ||||
|   template <typename Op, typename T1> inline Lattice<vobj> & operator=(const LatticeUnaryExpression<Op,T1> &expr) | ||||
|   { | ||||
|     GRID_TRACE("ExpressionTemplateEval"); | ||||
|     GridBase *egrid(nullptr); | ||||
|     GridFromExpression(egrid,expr); | ||||
|     assert(egrid!=nullptr); | ||||
| @@ -232,15 +128,20 @@ public: | ||||
|     assert( (cb==Odd) || (cb==Even)); | ||||
|     this->checkerboard=cb; | ||||
|      | ||||
|     auto me  = View(); | ||||
|     accelerator_for(ss,me.size(),1,{ | ||||
|       auto tmp = eval(ss,expr); | ||||
|       vstream(me[ss],tmp); | ||||
|     auto exprCopy = expr; | ||||
|     ExpressionViewOpen(exprCopy); | ||||
|     auto me  = View(AcceleratorWriteDiscard); | ||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||
|       auto tmp = eval(ss,exprCopy); | ||||
|       coalescedWrite(me[ss],tmp); | ||||
|     }); | ||||
|     me.ViewClose(); | ||||
|     ExpressionViewClose(exprCopy); | ||||
|     return *this; | ||||
|   } | ||||
|   template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr) | ||||
|   { | ||||
|     GRID_TRACE("ExpressionTemplateEval"); | ||||
|     GridBase *egrid(nullptr); | ||||
|     GridFromExpression(egrid,expr); | ||||
|     assert(egrid!=nullptr); | ||||
| @@ -251,15 +152,20 @@ public: | ||||
|     assert( (cb==Odd) || (cb==Even)); | ||||
|     this->checkerboard=cb; | ||||
|  | ||||
|     auto me  = View(); | ||||
|     accelerator_for(ss,me.size(),1,{ | ||||
|       auto tmp = eval(ss,expr); | ||||
|       vstream(me[ss],tmp); | ||||
|     auto exprCopy = expr; | ||||
|     ExpressionViewOpen(exprCopy); | ||||
|     auto me  = View(AcceleratorWriteDiscard); | ||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||
|       auto tmp = eval(ss,exprCopy); | ||||
|       coalescedWrite(me[ss],tmp); | ||||
|     }); | ||||
|     me.ViewClose(); | ||||
|     ExpressionViewClose(exprCopy); | ||||
|     return *this; | ||||
|   } | ||||
|   template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr) | ||||
|   { | ||||
|     GRID_TRACE("ExpressionTemplateEval"); | ||||
|     GridBase *egrid(nullptr); | ||||
|     GridFromExpression(egrid,expr); | ||||
|     assert(egrid!=nullptr); | ||||
| @@ -269,11 +175,15 @@ public: | ||||
|     CBFromExpression(cb,expr); | ||||
|     assert( (cb==Odd) || (cb==Even)); | ||||
|     this->checkerboard=cb; | ||||
|     auto me  = View(); | ||||
|     accelerator_for(ss,me.size(),1,{ | ||||
|       auto tmp = eval(ss,expr); | ||||
|       vstream(me[ss],tmp); | ||||
|     auto exprCopy = expr; | ||||
|     ExpressionViewOpen(exprCopy); | ||||
|     auto me  = View(AcceleratorWriteDiscard); | ||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||
|       auto tmp = eval(ss,exprCopy); | ||||
|       coalescedWrite(me[ss],tmp); | ||||
|     }); | ||||
|     me.ViewClose(); | ||||
|     ExpressionViewClose(exprCopy); | ||||
|     return *this; | ||||
|   } | ||||
|   //GridFromExpression is tricky to do | ||||
| @@ -324,10 +234,11 @@ public: | ||||
|   } | ||||
|  | ||||
|   template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){ | ||||
|     auto me  = View(); | ||||
|     auto me  = View(CpuWrite); | ||||
|     thread_for(ss,me.size(),{ | ||||
|       me[ss] = r; | ||||
| 	me[ss]= r; | ||||
|     }); | ||||
|     me.ViewClose(); | ||||
|     return *this; | ||||
|   } | ||||
|  | ||||
| @@ -337,11 +248,12 @@ public: | ||||
|   /////////////////////////////////////////// | ||||
|   // user defined constructor | ||||
|   /////////////////////////////////////////// | ||||
|   Lattice(GridBase *grid) {  | ||||
|   Lattice(GridBase *grid,ViewMode mode=AcceleratorWriteDiscard) {  | ||||
|     this->_grid = grid; | ||||
|     resize(this->_grid->oSites()); | ||||
|     assert((((uint64_t)&this->_odata[0])&0xF) ==0); | ||||
|     this->checkerboard=0; | ||||
|     SetViewMode(mode); | ||||
|   } | ||||
|    | ||||
|   //  virtual ~Lattice(void) = default; | ||||
| @@ -357,7 +269,6 @@ public: | ||||
|   // copy constructor | ||||
|   /////////////////////////////////////////// | ||||
|   Lattice(const Lattice& r){  | ||||
|     //    std::cout << "Lattice constructor(const Lattice &) "<<this<<std::endl;  | ||||
|     this->_grid = r.Grid(); | ||||
|     resize(this->_grid->oSites()); | ||||
|     *this = r; | ||||
| @@ -380,11 +291,12 @@ public: | ||||
|     typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0; | ||||
|     conformable(*this,r); | ||||
|     this->checkerboard = r.Checkerboard(); | ||||
|     auto me =   View(); | ||||
|     auto him= r.View(); | ||||
|     auto him= r.View(AcceleratorRead); | ||||
|     auto me =   View(AcceleratorWriteDiscard); | ||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||
|       coalescedWrite(me[ss],him(ss)); | ||||
|     }); | ||||
|     me.ViewClose();    him.ViewClose(); | ||||
|     return *this; | ||||
|   } | ||||
|  | ||||
| @@ -394,11 +306,12 @@ public: | ||||
|   inline Lattice<vobj> & operator = (const Lattice<vobj> & r){ | ||||
|     this->checkerboard = r.Checkerboard(); | ||||
|     conformable(*this,r); | ||||
|     auto me =   View(); | ||||
|     auto him= r.View(); | ||||
|     auto him= r.View(AcceleratorRead); | ||||
|     auto me =   View(AcceleratorWriteDiscard); | ||||
|     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||
|       coalescedWrite(me[ss],him(ss)); | ||||
|     }); | ||||
|     me.ViewClose();    him.ViewClose(); | ||||
|     return *this; | ||||
|   } | ||||
|   /////////////////////////////////////////// | ||||
|   | ||||
							
								
								
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,248 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/lattice/Lattice_basis.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| 			   /*  END LEGAL */ | ||||
|  | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Field> | ||||
| void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  | ||||
| { | ||||
|   // If assume basis[j] are already orthonormal, | ||||
|   // can take all inner products in parallel saving 2x bandwidth | ||||
|   // Save 3x bandwidth on the second line of loop. | ||||
|   // perhaps 2.5x speed up. | ||||
|   // 2x overall in Multigrid Lanczos   | ||||
|   for(int j=0; j<k; ++j){ | ||||
|     auto ip = innerProduct(basis[j],w); | ||||
|     w = w - ip*basis[j]; | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class VField, class Matrix> | ||||
| void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)  | ||||
| { | ||||
|   typedef decltype(basis[0]) Field; | ||||
|   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||
|  | ||||
|   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||
|   typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj; | ||||
|   typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t; | ||||
|   GridBase* grid = basis[0].Grid(); | ||||
|        | ||||
|   for(int k=0;k<basis.size();k++){ | ||||
|     basis_v.push_back(basis[k].View(AcceleratorWrite)); | ||||
|   } | ||||
|  | ||||
| #if ( (!defined(GRID_CUDA)) ) | ||||
|   int max_threads = thread_max(); | ||||
|   Vector < vobj > Bt(Nm * max_threads); | ||||
|   thread_region | ||||
|     { | ||||
|       vobj* B = &Bt[Nm * thread_num()]; | ||||
|       thread_for_in_region(ss, grid->oSites(),{ | ||||
| 	  for(int j=j0; j<j1; ++j) B[j]=0.; | ||||
|        | ||||
| 	  for(int j=j0; j<j1; ++j){ | ||||
| 	    for(int k=k0; k<k1; ++k){ | ||||
| 	      B[j] +=Qt(j,k) * basis_v[k][ss]; | ||||
| 	    } | ||||
| 	  } | ||||
| 	  for(int j=j0; j<j1; ++j){ | ||||
| 	    basis_v[j][ss] = B[j]; | ||||
| 	  } | ||||
| 	}); | ||||
|     } | ||||
| #else | ||||
|   View *basis_vp = &basis_v[0]; | ||||
|  | ||||
|   int nrot = j1-j0; | ||||
|   if (!nrot) // edge case not handled gracefully by Cuda | ||||
|     return; | ||||
|  | ||||
|   uint64_t oSites   =grid->oSites(); | ||||
|   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead | ||||
|  | ||||
|   Vector <vobj> Bt(siteBlock * nrot);  | ||||
|   auto Bp=&Bt[0]; | ||||
|  | ||||
|   // GPU readable copy of matrix | ||||
|   Vector<Coeff_t> Qt_jv(Nm*Nm); | ||||
|   Coeff_t *Qt_p = & Qt_jv[0]; | ||||
|   thread_for(i,Nm*Nm,{ | ||||
|       int j = i/Nm; | ||||
|       int k = i%Nm; | ||||
|       Qt_p[i]=Qt(j,k); | ||||
|   }); | ||||
|  | ||||
|   // Block the loop to keep storage footprint down | ||||
|   for(uint64_t s=0;s<oSites;s+=siteBlock){ | ||||
|  | ||||
|     // remaining work in this block | ||||
|     int ssites=MIN(siteBlock,oSites-s); | ||||
|  | ||||
|     // zero out the accumulators | ||||
|     accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{ | ||||
| 	decltype(coalescedRead(Bp[ss])) z; | ||||
| 	z=Zero(); | ||||
| 	coalescedWrite(Bp[ss],z); | ||||
|       }); | ||||
|  | ||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||
| 	 | ||||
| 	int j =sj%nrot; | ||||
| 	int jj  =j0+j; | ||||
| 	int ss =sj/nrot; | ||||
| 	int sss=ss+s; | ||||
|  | ||||
| 	for(int k=k0; k<k1; ++k){ | ||||
| 	  auto tmp = coalescedRead(Bp[ss*nrot+j]); | ||||
| 	  coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_vp[k][sss])); | ||||
| 	} | ||||
|       }); | ||||
|  | ||||
|     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||
| 	int j =sj%nrot; | ||||
| 	int jj  =j0+j; | ||||
| 	int ss =sj/nrot; | ||||
| 	int sss=ss+s; | ||||
| 	coalescedWrite(basis_vp[jj][sss],coalescedRead(Bp[ss*nrot+j])); | ||||
|       }); | ||||
|   } | ||||
| #endif | ||||
|  | ||||
|   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||
| } | ||||
|  | ||||
| // Extract a single rotated vector | ||||
| template<class Field> | ||||
| void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  | ||||
| { | ||||
|   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||
|   typedef typename Field::vector_object vobj; | ||||
|   GridBase* grid = basis[0].Grid(); | ||||
|  | ||||
|   result.Checkerboard() = basis[0].Checkerboard(); | ||||
|  | ||||
|   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||
|   for(int k=0;k<basis.size();k++){ | ||||
|     basis_v.push_back(basis[k].View(AcceleratorRead)); | ||||
|   } | ||||
|   vobj zz=Zero(); | ||||
|   Vector<double> Qt_jv(Nm); | ||||
|   double * Qt_j = & Qt_jv[0]; | ||||
|   for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k); | ||||
|  | ||||
|   auto basis_vp=& basis_v[0]; | ||||
|   autoView(result_v,result,AcceleratorWrite); | ||||
|   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{ | ||||
|     vobj zzz=Zero(); | ||||
|     auto B=coalescedRead(zzz); | ||||
|     for(int k=k0; k<k1; ++k){ | ||||
|       B +=Qt_j[k] * coalescedRead(basis_vp[k][ss]); | ||||
|     } | ||||
|     coalescedWrite(result_v[ss], B); | ||||
|   }); | ||||
|   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  | ||||
| { | ||||
|   int vlen = idx.size(); | ||||
|  | ||||
|   assert(vlen>=1); | ||||
|   assert(vlen<=sort_vals.size()); | ||||
|   assert(vlen<=_v.size()); | ||||
|  | ||||
|   for (size_t i=0;i<vlen;i++) { | ||||
|  | ||||
|     if (idx[i] != i) { | ||||
|  | ||||
|       ////////////////////////////////////// | ||||
|       // idx[i] is a table of desired sources giving a permutation. | ||||
|       // Swap v[i] with v[idx[i]]. | ||||
|       // Find  j>i for which _vnew[j] = _vold[i], | ||||
|       // track the move idx[j] => idx[i] | ||||
|       // track the move idx[i] => i | ||||
|       ////////////////////////////////////// | ||||
|       size_t j; | ||||
|       for (j=i;j<idx.size();j++) | ||||
| 	if (idx[j]==i) | ||||
| 	  break; | ||||
|  | ||||
|       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); | ||||
|  | ||||
|       swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy | ||||
|       std::swap(sort_vals[i],sort_vals[idx[i]]); | ||||
|  | ||||
|       idx[j] = idx[i]; | ||||
|       idx[i] = i; | ||||
|     } | ||||
|   } | ||||
| } | ||||
|  | ||||
| inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  | ||||
| { | ||||
|   std::vector<int> idx(sort_vals.size()); | ||||
|   std::iota(idx.begin(), idx.end(), 0); | ||||
|  | ||||
|   // sort indexes based on comparing values in v | ||||
|   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { | ||||
|     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); | ||||
|   }); | ||||
|   return idx; | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  | ||||
| { | ||||
|   std::vector<int> idx = basisSortGetIndex(sort_vals); | ||||
|   if (reverse) | ||||
|     std::reverse(idx.begin(), idx.end()); | ||||
|    | ||||
|   basisReorderInPlace(_v,sort_vals,idx); | ||||
| } | ||||
|  | ||||
| // PAB: faster to compute the inner products first then fuse loops. | ||||
| // If performance critical can improve. | ||||
| template<class Field> | ||||
| void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) { | ||||
|   result = Zero(); | ||||
|   assert(_v.size()==eval.size()); | ||||
|   int N = (int)_v.size(); | ||||
|   for (int i=0;i<N;i++) { | ||||
|     Field& tmp = _v[i]; | ||||
|     axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result); | ||||
|   } | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -42,34 +42,6 @@ NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| typedef iScalar<vInteger> vPredicate ; | ||||
|  | ||||
| /* | ||||
| template <class iobj, class vobj, class robj> accelerator_inline  | ||||
| vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, const robj &iffalse)  | ||||
| { | ||||
|   typename std::remove_const<vobj>::type ret; | ||||
|  | ||||
|   typedef typename vobj::scalar_object scalar_object; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   const int Nsimd = vobj::vector_type::Nsimd(); | ||||
|  | ||||
|   ExtractBuffer<Integer> mask(Nsimd); | ||||
|   ExtractBuffer<scalar_object> truevals(Nsimd); | ||||
|   ExtractBuffer<scalar_object> falsevals(Nsimd); | ||||
|  | ||||
|   extract(iftrue, truevals); | ||||
|   extract(iffalse, falsevals); | ||||
|   extract<vInteger, Integer>(TensorRemove(predicate), mask); | ||||
|  | ||||
|   for (int s = 0; s < Nsimd; s++) { | ||||
|     if (mask[s]) falsevals[s] = truevals[s]; | ||||
|   } | ||||
|  | ||||
|   merge(ret, falsevals); | ||||
|   return ret; | ||||
| } | ||||
| */ | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| // compare lattice to lattice | ||||
| ////////////////////////////////////////////////////////////////////////// | ||||
| @@ -78,9 +50,9 @@ template<class vfunctor,class lobj,class robj> | ||||
| inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs) | ||||
| { | ||||
|   Lattice<vPredicate> ret(rhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( lhs_v, lhs, CpuRead); | ||||
|   autoView( rhs_v, rhs, CpuRead); | ||||
|   autoView( ret_v, ret, CpuWrite); | ||||
|   thread_for( ss, rhs_v.size(), { | ||||
|       ret_v[ss]=op(lhs_v[ss],rhs_v[ss]); | ||||
|   }); | ||||
| @@ -93,8 +65,8 @@ template<class vfunctor,class lobj,class robj> | ||||
| inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs) | ||||
| { | ||||
|   Lattice<vPredicate> ret(lhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( lhs_v, lhs, CpuRead); | ||||
|   autoView( ret_v, ret, CpuWrite); | ||||
|   thread_for( ss, lhs_v.size(), { | ||||
|     ret_v[ss]=op(lhs_v[ss],rhs); | ||||
|   }); | ||||
| @@ -107,8 +79,8 @@ template<class vfunctor,class lobj,class robj> | ||||
| inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs) | ||||
| { | ||||
|   Lattice<vPredicate> ret(rhs.Grid()); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( rhs_v, rhs, CpuRead); | ||||
|   autoView( ret_v, ret, CpuWrite); | ||||
|   thread_for( ss, rhs_v.size(), { | ||||
|     ret_v[ss]=op(lhs,rhs_v[ss]); | ||||
|   }); | ||||
|   | ||||
| @@ -37,7 +37,7 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | ||||
|   GridBase *grid = l.Grid(); | ||||
|   int Nsimd = grid->iSites(); | ||||
|  | ||||
|   auto l_v = l.View(); | ||||
|   autoView(l_v, l, CpuWrite); | ||||
|   thread_for( o, grid->oSites(), { | ||||
|     vector_type vI; | ||||
|     Coordinate gcoor; | ||||
| @@ -51,23 +51,5 @@ template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | ||||
|   }); | ||||
| }; | ||||
|  | ||||
| // LatticeCoordinate(); | ||||
| // FIXME for debug; deprecate this; made obscelete by  | ||||
| template<class vobj> void lex_sites(Lattice<vobj> &l){ | ||||
|   auto l_v = l.View(); | ||||
|   Real *v_ptr = (Real *)&l_v[0]; | ||||
|   size_t o_len = l.Grid()->oSites(); | ||||
|   size_t v_len = sizeof(vobj)/sizeof(vRealF); | ||||
|   size_t vec_len = vRealF::Nsimd(); | ||||
|  | ||||
|   for(int i=0;i<o_len;i++){ | ||||
|     for(int j=0;j<v_len;j++){ | ||||
|       for(int vv=0;vv<vec_len;vv+=2){ | ||||
| 	v_ptr[i*v_len*vec_len+j*vec_len+vv  ]= i+vv*500; | ||||
| 	v_ptr[i*v_len*vec_len+j*vec_len+vv+1]= i+vv*500; | ||||
|       } | ||||
|     }} | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|   | ||||
| @@ -2,11 +2,10 @@ | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| 
 | ||||
|     Source file: ./lib/qcd/action/fermion/PartialFractionFermion5D.cc | ||||
|     Source file: ./lib/lattice/Lattice_crc.h | ||||
| 
 | ||||
|     Copyright (C) 2015 | ||||
|     Copyright (C) 2021 | ||||
| 
 | ||||
| Author: Peter Boyle <pabobyle@ph.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| 
 | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
| @@ -26,14 +25,31 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #include <Grid/qcd/action/fermion/FermionCore.h> | ||||
| #include <Grid/qcd/action/fermion/PartialFractionFermion5D.h> | ||||
| #include <Grid/qcd/action/fermion/implementation/PartialFractionFermion5DImplementation.h> | ||||
| #pragma once | ||||
| 
 | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| #include "impl.h" | ||||
| template class PartialFractionFermion5D<IMPLEMENTATION>;  | ||||
| template<class vobj> void DumpSliceNorm(std::string s,Lattice<vobj> &f,int mu=-1) | ||||
| { | ||||
|   auto ff = localNorm2(f); | ||||
|   if ( mu==-1 ) mu = f.Grid()->Nd()-1; | ||||
|   typedef typename vobj::tensor_reduced normtype; | ||||
|   typedef typename normtype::scalar_object scalar; | ||||
|   std::vector<scalar> sff; | ||||
|   sliceSum(ff,sff,mu); | ||||
|   for(int t=0;t<sff.size();t++){ | ||||
|     std::cout << s<<" "<<t<<" "<<sff[t]<<std::endl; | ||||
|   } | ||||
| } | ||||
| 
 | ||||
| template<class vobj> uint32_t crc(Lattice<vobj> & buf) | ||||
| { | ||||
|   autoView( buf_v , buf, CpuRead); | ||||
|   return ::crc32(0L,(unsigned char *)&buf_v[0],(size_t)sizeof(vobj)*buf.oSites()); | ||||
| } | ||||
| 
 | ||||
| #define CRC(U) std::cout << "FingerPrint "<<__FILE__ <<" "<< __LINE__ <<" "<< #U <<" "<<crc(U)<<std::endl; | ||||
| 
 | ||||
| NAMESPACE_END(Grid); | ||||
| 
 | ||||
| 
 | ||||
| @@ -43,8 +43,8 @@ template<class vobj> | ||||
| inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced> | ||||
| { | ||||
|   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||
|     coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss))); | ||||
|   }); | ||||
| @@ -56,9 +56,9 @@ template<class vobj> | ||||
| inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced> | ||||
| { | ||||
|   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||
|     coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss))); | ||||
|   }); | ||||
| @@ -73,9 +73,9 @@ inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Latt | ||||
|   typedef decltype(coalescedRead(ll())) sll; | ||||
|   typedef decltype(coalescedRead(rr())) srr; | ||||
|   Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   accelerator_for(ss,rhs_v.size(),1,{ | ||||
|     // FIXME had issues with scalar version of outer  | ||||
|     // Use vector [] operator and don't read coalesce this loop | ||||
|   | ||||
| @@ -32,7 +32,6 @@ template<class vobj> | ||||
| static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,const Lattice<vobj> &Y,int Orthog,RealD scale=1.0)  | ||||
| {     | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||
| @@ -51,9 +50,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | ||||
|   int block =FullGrid->_slice_block [Orthog]; | ||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||
|   int ostride=FullGrid->_ostride[Orthog]; | ||||
|   auto X_v = X.View(); | ||||
|   auto Y_v = Y.View(); | ||||
|   auto R_v = R.View(); | ||||
|   autoView( X_v , X, CpuRead); | ||||
|   autoView( Y_v , Y, CpuRead); | ||||
|   autoView( R_v , R, CpuWrite); | ||||
|   thread_region | ||||
|   { | ||||
|     std::vector<vobj> s_x(Nblock); | ||||
| @@ -82,7 +81,6 @@ template<class vobj> | ||||
| static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,int Orthog,RealD scale=1.0)  | ||||
| {     | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||
| @@ -97,8 +95,8 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | ||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||
|   int ostride=FullGrid->_ostride[Orthog]; | ||||
|  | ||||
|   auto X_v = X.View(); | ||||
|   auto R_v = R.View(); | ||||
|   autoView( X_v , X, CpuRead); | ||||
|   autoView( R_v , R, CpuWrite); | ||||
|  | ||||
|   thread_region | ||||
|   { | ||||
| @@ -130,7 +128,6 @@ template<class vobj> | ||||
| static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int Orthog)  | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|    | ||||
|   GridBase *FullGrid  = lhs.Grid(); | ||||
| @@ -156,8 +153,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | ||||
|   int ostride=FullGrid->_ostride[Orthog]; | ||||
|  | ||||
|   typedef typename vobj::vector_typeD vector_typeD; | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto rhs_v = rhs.View(); | ||||
|   autoView( lhs_v , lhs, CpuRead); | ||||
|   autoView( rhs_v , rhs, CpuRead); | ||||
|   thread_region { | ||||
|     std::vector<vobj> Left(Nblock); | ||||
|     std::vector<vobj> Right(Nblock); | ||||
|   | ||||
| @@ -46,9 +46,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Ind | ||||
| { | ||||
|   Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid()); | ||||
|   ret.Checkerboard()=lhs.Checkerboard(); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   thread_for( ss, lhs_v.size(), { | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i); | ||||
|   }); | ||||
|   return ret; | ||||
| @@ -58,9 +58,9 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd | ||||
| { | ||||
|   Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid()); | ||||
|   ret.Checkerboard()=lhs.Checkerboard(); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   thread_for( ss, lhs_v.size(), { | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j); | ||||
|   }); | ||||
|   return ret; | ||||
| @@ -72,18 +72,18 @@ auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekInd | ||||
| template<int Index,class vobj>   | ||||
| void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i) | ||||
| { | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   thread_for( ss, lhs_v.size(), { | ||||
|   autoView( rhs_v, rhs, AcceleratorRead); | ||||
|   autoView( lhs_v, lhs, AcceleratorWrite); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i); | ||||
|   }); | ||||
| } | ||||
| template<int Index,class vobj>  | ||||
| void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j) | ||||
| { | ||||
|   auto rhs_v = rhs.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   thread_for( ss, lhs_v.size(), { | ||||
|   autoView( rhs_v, rhs, AcceleratorRead); | ||||
|   autoView( lhs_v, lhs, AcceleratorWrite); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j); | ||||
|   }); | ||||
| } | ||||
| @@ -96,9 +96,6 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){ | ||||
|  | ||||
|   GridBase *grid=l.Grid(); | ||||
|  | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nsimd = grid->Nsimd(); | ||||
|  | ||||
|   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); | ||||
| @@ -111,7 +108,7 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){ | ||||
|  | ||||
|   // extract-modify-merge cycle is easiest way and this is not perf critical | ||||
|   ExtractBuffer<sobj> buf(Nsimd); | ||||
|   auto l_v = l.View(); | ||||
|   autoView( l_v , l, CpuWrite); | ||||
|   if ( rank == grid->ThisRank() ) { | ||||
|     extract(l_v[odx],buf); | ||||
|     buf[idx] = s; | ||||
| @@ -125,14 +122,17 @@ void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){ | ||||
| ////////////////////////////////////////////////////////// | ||||
| // Peek a scalar object from the SIMD array | ||||
| ////////////////////////////////////////////////////////// | ||||
| template<class vobj> | ||||
| typename vobj::scalar_object peekSite(const Lattice<vobj> &l,const Coordinate &site){ | ||||
|   typename vobj::scalar_object s; | ||||
|   peekSite(s,l,site); | ||||
|   return s; | ||||
| }         | ||||
| template<class vobj,class sobj> | ||||
| void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | ||||
|          | ||||
|   GridBase *grid=l.Grid(); | ||||
|  | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nsimd = grid->Nsimd(); | ||||
|  | ||||
|   assert( l.Checkerboard() == l.Grid()->CheckerBoard(site)); | ||||
| @@ -141,7 +141,7 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | ||||
|   grid->GlobalCoorToRankIndex(rank,odx,idx,site); | ||||
|  | ||||
|   ExtractBuffer<sobj> buf(Nsimd); | ||||
|   auto l_v = l.View(); | ||||
|   autoView( l_v , l, CpuWrite); | ||||
|   extract(l_v[odx],buf); | ||||
|  | ||||
|   s = buf[idx]; | ||||
| @@ -151,21 +151,21 @@ void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | ||||
|   return; | ||||
| }; | ||||
|  | ||||
|  | ||||
| ////////////////////////////////////////////////////////// | ||||
| // Peek a scalar object from the SIMD array | ||||
| ////////////////////////////////////////////////////////// | ||||
| // Must be CPU read view | ||||
| template<class vobj,class sobj> | ||||
| accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site){ | ||||
|          | ||||
|   GridBase *grid = l.Grid(); | ||||
|  | ||||
| inline void peekLocalSite(sobj &s,const LatticeView<vobj> &l,Coordinate &site) | ||||
| { | ||||
|   GridBase *grid = l.getGrid(); | ||||
|   assert(l.mode==CpuRead); | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nsimd = grid->Nsimd(); | ||||
|  | ||||
|   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); | ||||
|   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||
|  | ||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||
| @@ -173,28 +173,36 @@ accelerator_inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate | ||||
|   idx= grid->iIndex(site); | ||||
|   odx= grid->oIndex(site); | ||||
|    | ||||
|   auto l_v = l.View(); | ||||
|   scalar_type * vp = (scalar_type *)&l_v[odx]; | ||||
|   const vector_type *vp = (const vector_type *) &l[odx]; | ||||
|   scalar_type * pt = (scalar_type *)&s; | ||||
|        | ||||
|   for(int w=0;w<words;w++){ | ||||
|     pt[w] = vp[idx+w*Nsimd]; | ||||
|     pt[w] = getlane(vp[w],idx); | ||||
|   } | ||||
|        | ||||
|   return; | ||||
| }; | ||||
|  | ||||
| template<class vobj,class sobj> | ||||
| accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate &site){ | ||||
| inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site) | ||||
| { | ||||
|   autoView(lv,l,CpuRead); | ||||
|   peekLocalSite(s,lv,site); | ||||
|   return; | ||||
| }; | ||||
|  | ||||
|   GridBase *grid=l.Grid(); | ||||
| // Must be CPU write view | ||||
| template<class vobj,class sobj> | ||||
| inline void pokeLocalSite(const sobj &s,LatticeView<vobj> &l,Coordinate &site) | ||||
| { | ||||
|   GridBase *grid=l.getGrid(); | ||||
|   assert(l.mode==CpuWrite); | ||||
|  | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nsimd = grid->Nsimd(); | ||||
|  | ||||
|   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); | ||||
|   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||
|  | ||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||
| @@ -202,13 +210,19 @@ accelerator_inline void pokeLocalSite(const sobj &s,Lattice<vobj> &l,Coordinate | ||||
|   idx= grid->iIndex(site); | ||||
|   odx= grid->oIndex(site); | ||||
|  | ||||
|   auto l_v = l.View(); | ||||
|   scalar_type * vp = (scalar_type *)&l_v[odx]; | ||||
|   vector_type * vp = (vector_type *)&l[odx]; | ||||
|   scalar_type * pt = (scalar_type *)&s; | ||||
|   for(int w=0;w<words;w++){ | ||||
|     vp[idx+w*Nsimd] = pt[w]; | ||||
|     putlane(vp[w],pt[w],idx); | ||||
|   } | ||||
|   return; | ||||
| }; | ||||
|  | ||||
| template<class vobj,class sobj> | ||||
| inline void pokeLocalSite(const sobj &s, Lattice<vobj> &l,Coordinate &site) | ||||
| { | ||||
|   autoView(lv,l,CpuWrite); | ||||
|   pokeLocalSite(s,lv,site); | ||||
|   return; | ||||
| }; | ||||
|  | ||||
|   | ||||
							
								
								
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,79 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/lattice/Lattice_reality.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: neo <cossu@post.kek.jp> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_LATTICE_REAL_IMAG_H | ||||
| #define GRID_LATTICE_REAL_IMAG_H | ||||
|  | ||||
|  | ||||
| // FIXME .. this is the sector of the code  | ||||
| // I am most worried about the directions | ||||
| // The choice of burying complex in the SIMD | ||||
| // is making the use of "real" and "imag" very cumbersome | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class vobj> inline Lattice<vobj> real(const Lattice<vobj> &lhs){ | ||||
|   Lattice<vobj> ret(lhs.Grid()); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard()=lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] =real(lhs_v[ss]); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
| template<class vobj> inline Lattice<vobj> imag(const Lattice<vobj> &lhs){ | ||||
|   Lattice<vobj> ret(lhs.Grid()); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard()=lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] =imag(lhs_v[ss]); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
|  | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
|   auto real(const Expression &expr) -> decltype(real(closure(expr)))		 | ||||
| {									 | ||||
|   return real(closure(expr));					 | ||||
| } | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
|   auto imag(const Expression &expr) -> decltype(imag(closure(expr)))		 | ||||
| {									 | ||||
|   return imag(closure(expr));					 | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -40,24 +40,77 @@ NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){ | ||||
|   Lattice<vobj> ret(lhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||
|     coalescedWrite(ret_v[ss], adj(lhs_v(ss))); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard()=lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|      ret_v[ss] = adj(lhs_v[ss]); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
|  | ||||
| template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){ | ||||
|   Lattice<vobj> ret(lhs.Grid()); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   auto ret_v = ret.View(); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||
|     coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss))); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
|  | ||||
| template<class vobj> inline Lattice<typename vobj::Complexified> toComplex(const Lattice<vobj> &lhs){ | ||||
|   Lattice<typename vobj::Complexified> ret(lhs.Grid()); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] = toComplex(lhs_v[ss]); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
| template<class vobj> inline Lattice<typename vobj::Realified> toReal(const Lattice<vobj> &lhs){ | ||||
|   Lattice<typename vobj::Realified> ret(lhs.Grid()); | ||||
|  | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|  | ||||
|   ret.Checkerboard() = lhs.Checkerboard(); | ||||
|   accelerator_for( ss, lhs_v.size(), 1, { | ||||
|     ret_v[ss] = toReal(lhs_v[ss]); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
|  | ||||
|  | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
| auto toComplex(const Expression &expr)  -> decltype(closure(expr))  | ||||
| { | ||||
|   return toComplex(closure(expr)); | ||||
| } | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
| auto toReal(const Expression &expr)  -> decltype(closure(expr))  | ||||
| { | ||||
|   return toReal(closure(expr)); | ||||
| } | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
| auto adj(const Expression &expr)  -> decltype(closure(expr))  | ||||
| { | ||||
|   return adj(closure(expr)); | ||||
| } | ||||
| template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||
| auto conjugate(const Expression &expr)  -> decltype(closure(expr))  | ||||
| { | ||||
|   return conjugate(closure(expr)); | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
|   | ||||
| @@ -5,6 +5,7 @@ | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
| @@ -24,9 +25,12 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/Grid_Eigen_Dense.h> | ||||
|  | ||||
|  | ||||
| #ifdef GRID_NVCC | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||
| #include <Grid/lattice/Lattice_reduction_gpu.h> | ||||
| #endif | ||||
| #if defined(GRID_SYCL) | ||||
| #include <Grid/lattice/Lattice_reduction_sycl.h> | ||||
| #endif | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| @@ -38,7 +42,7 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::scalar_object  sobj; | ||||
|  | ||||
|   const int Nsimd = vobj::Nsimd(); | ||||
|   //  const int Nsimd = vobj::Nsimd(); | ||||
|   const int nthread = GridThread::GetThreads(); | ||||
|  | ||||
|   Vector<sobj> sumarray(nthread); | ||||
| @@ -61,24 +65,132 @@ inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites) | ||||
|   for(int i=0;i<nthread;i++){ | ||||
|     ssum = ssum+sumarray[i]; | ||||
|   }  | ||||
|    | ||||
|   return ssum; | ||||
| } | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::scalar_objectD  sobj; | ||||
|  | ||||
|   const int nthread = GridThread::GetThreads(); | ||||
|  | ||||
|   Vector<sobj> sumarray(nthread); | ||||
|   for(int i=0;i<nthread;i++){ | ||||
|     sumarray[i]=Zero(); | ||||
|   } | ||||
|    | ||||
|   thread_for(thr,nthread, { | ||||
|     int nwork, mywork, myoff; | ||||
|     nwork = osites; | ||||
|     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||
|     vobj vvsum=Zero(); | ||||
|     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||
|       vvsum = vvsum + arg[ss]; | ||||
|     } | ||||
|     sumarray[thr]=Reduce(vvsum); | ||||
|   }); | ||||
|    | ||||
|   sobj ssum=Zero();  // sum across threads | ||||
|   for(int i=0;i<nthread;i++){ | ||||
|     ssum = ssum+sumarray[i]; | ||||
|   }  | ||||
|   return ssum; | ||||
| } | ||||
| /* | ||||
| Threaded max, don't use for now | ||||
| template<class Double> | ||||
| inline Double max(const Double *arg, Integer osites) | ||||
| { | ||||
|   //  const int Nsimd = vobj::Nsimd(); | ||||
|   const int nthread = GridThread::GetThreads(); | ||||
|  | ||||
|   std::vector<Double> maxarray(nthread); | ||||
|    | ||||
|   thread_for(thr,nthread, { | ||||
|     int nwork, mywork, myoff; | ||||
|     nwork = osites; | ||||
|     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||
|     Double max=arg[0]; | ||||
|     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||
|       if( arg[ss] > max ) max = arg[ss]; | ||||
|     } | ||||
|     maxarray[thr]=max; | ||||
|   }); | ||||
|    | ||||
|   Double tmax=maxarray[0]; | ||||
|   for(int i=0;i<nthread;i++){ | ||||
|     if (maxarray[i]>tmax) tmax = maxarray[i]; | ||||
|   }  | ||||
|   return tmax; | ||||
| } | ||||
| */ | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_object sum(const vobj *arg, Integer osites) | ||||
| { | ||||
| #ifdef GRID_NVCC | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP)||defined(GRID_SYCL) | ||||
|   return sum_gpu(arg,osites); | ||||
| #else | ||||
|   return sum_cpu(arg,osites); | ||||
| #endif   | ||||
| } | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_objectD sumD(const vobj *arg, Integer osites) | ||||
| { | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP)||defined(GRID_SYCL) | ||||
|   return sumD_gpu(arg,osites); | ||||
| #else | ||||
|   return sumD_cpu(arg,osites); | ||||
| #endif   | ||||
| } | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_large(const vobj *arg, Integer osites) | ||||
| { | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP)||defined(GRID_SYCL) | ||||
|   return sumD_gpu_large(arg,osites); | ||||
| #else | ||||
|   return sumD_cpu(arg,osites); | ||||
| #endif   | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_object rankSum(const Lattice<vobj> &arg) | ||||
| { | ||||
|   Integer osites = arg.Grid()->oSites(); | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP)||defined(GRID_SYCL) | ||||
|   autoView( arg_v, arg, AcceleratorRead); | ||||
|   return sum_gpu(&arg_v[0],osites); | ||||
| #else | ||||
|   autoView(arg_v, arg, CpuRead); | ||||
|   return sum_cpu(&arg_v[0],osites); | ||||
| #endif   | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_object sum(const Lattice<vobj> &arg) | ||||
| { | ||||
|   auto arg_v = arg.View(); | ||||
|   auto ssum = rankSum(arg); | ||||
|   arg.Grid()->GlobalSum(ssum); | ||||
|   return ssum; | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_object rankSumLarge(const Lattice<vobj> &arg) | ||||
| { | ||||
| #if defined(GRID_CUDA)||defined(GRID_HIP)||defined(GRID_SYCL) | ||||
|   autoView( arg_v, arg, AcceleratorRead); | ||||
|   Integer osites = arg.Grid()->oSites(); | ||||
|   auto ssum= sum(&arg_v[0],osites); | ||||
|   return sum_gpu_large(&arg_v[0],osites); | ||||
| #else | ||||
|   autoView(arg_v, arg, CpuRead); | ||||
|   Integer osites = arg.Grid()->oSites(); | ||||
|   return sum_cpu(&arg_v[0],osites); | ||||
| #endif | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| inline typename vobj::scalar_object sum_large(const Lattice<vobj> &arg) | ||||
| { | ||||
|   auto ssum = rankSumLarge(arg); | ||||
|   arg.Grid()->GlobalSum(ssum); | ||||
|   return ssum; | ||||
| } | ||||
| @@ -91,57 +203,92 @@ template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){ | ||||
|   return real(nrm);  | ||||
| } | ||||
|  | ||||
| //The global maximum of the site norm2 | ||||
| template<class vobj> inline RealD maxLocalNorm2(const Lattice<vobj> &arg) | ||||
| { | ||||
|   typedef typename vobj::tensor_reduced vscalar;  //iScalar<iScalar<.... <vPODtype> > > | ||||
|   typedef typename vscalar::scalar_object  scalar;   //iScalar<iScalar<.... <PODtype> > > | ||||
|  | ||||
|   Lattice<vscalar> inner = localNorm2(arg); | ||||
|  | ||||
|   auto grid = arg.Grid(); | ||||
|  | ||||
|   RealD max; | ||||
|   for(int l=0;l<grid->lSites();l++){ | ||||
|     Coordinate coor; | ||||
|     scalar val; | ||||
|     RealD r; | ||||
|     grid->LocalIndexToLocalCoor(l,coor); | ||||
|     peekLocalSite(val,inner,coor); | ||||
|     r=real(TensorRemove(val)); | ||||
|     if( (l==0) || (r>max)){ | ||||
|       max=r; | ||||
|     } | ||||
|   } | ||||
|   grid->GlobalMax(max); | ||||
|   return max; | ||||
| } | ||||
|  | ||||
| // Double inner product | ||||
| template<class vobj> | ||||
| inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||
| inline ComplexD rankInnerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||
| { | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_typeD vector_type; | ||||
|   ComplexD  nrm; | ||||
|    | ||||
|   GridBase *grid = left.Grid(); | ||||
|  | ||||
|   // Might make all code paths go this way. | ||||
|   auto left_v = left.View(); | ||||
|   auto right_v=right.View(); | ||||
|  | ||||
|   const uint64_t nsimd = grid->Nsimd(); | ||||
|   const uint64_t sites = grid->oSites(); | ||||
|    | ||||
| #ifdef GRID_NVCC | ||||
|   // Might make all code paths go this way. | ||||
| #if 0 | ||||
|   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|   { | ||||
|     autoView( left_v , left, AcceleratorRead); | ||||
|     autoView( right_v,right, AcceleratorRead); | ||||
|     // This code could read coalesce | ||||
|     // GPU - SIMT lane compliance... | ||||
|   typedef decltype(innerProduct(left_v[0],right_v[0])) inner_t; | ||||
|     accelerator_for( ss, sites, nsimd,{ | ||||
| 	auto x_l = left_v(ss); | ||||
| 	auto y_l = right_v(ss); | ||||
| 	coalescedWrite(inner_tmp_v[ss],innerProductD(x_l,y_l)); | ||||
|     }); | ||||
|   } | ||||
| #else | ||||
|   typedef decltype(innerProduct(vobj(),vobj())) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|      | ||||
|   { | ||||
|     autoView( left_v , left, AcceleratorRead); | ||||
|     autoView( right_v,right, AcceleratorRead); | ||||
|  | ||||
|     // GPU - SIMT lane compliance... | ||||
|     accelerator_for( ss, sites, nsimd,{ | ||||
| 	auto x_l = left_v(ss); | ||||
| 	auto y_l = right_v(ss); | ||||
| 	coalescedWrite(inner_tmp_v[ss],innerProduct(x_l,y_l)); | ||||
|   }) | ||||
|  | ||||
|   // This is in single precision and fails some tests | ||||
|   // Need a sumD that sums in double | ||||
|   nrm = TensorRemove(sumD_gpu(inner_tmp_v,sites));   | ||||
| #else | ||||
|   // CPU  | ||||
|   typedef decltype(innerProductD(left_v[0],right_v[0])) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|    | ||||
|   accelerator_for( ss, sites, nsimd,{ | ||||
|       auto x_l = left_v[ss]; | ||||
|       auto y_l = right_v[ss]; | ||||
|       inner_tmp_v[ss]=innerProductD(x_l,y_l); | ||||
|   }) | ||||
|   nrm = TensorRemove(sum(inner_tmp_v,sites)); | ||||
|     }); | ||||
|   } | ||||
| #endif | ||||
|   grid->GlobalSum(nrm); | ||||
|  | ||||
|   // This is in single precision and fails some tests | ||||
|   auto anrm = sumD(inner_tmp_v,sites);   | ||||
|   nrm = anrm; | ||||
|   return nrm; | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) { | ||||
|   GridBase *grid = left.Grid(); | ||||
|   ComplexD nrm = rankInnerProduct(left,right); | ||||
|   grid->GlobalSum(nrm); | ||||
|   return nrm; | ||||
| } | ||||
|  | ||||
|  | ||||
| ///////////////////////// | ||||
| // Fast axpby_norm | ||||
| // z = a x + b y | ||||
| @@ -161,21 +308,30 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt | ||||
|   conformable(z,x); | ||||
|   conformable(x,y); | ||||
|  | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_typeD vector_type; | ||||
|   //  typedef typename vobj::vector_typeD vector_type; | ||||
|   RealD  nrm; | ||||
|    | ||||
|   GridBase *grid = x.Grid(); | ||||
|  | ||||
|   auto x_v=x.View(); | ||||
|   auto y_v=y.View(); | ||||
|   auto z_v=z.View(); | ||||
|  | ||||
|   const uint64_t nsimd = grid->Nsimd(); | ||||
|   const uint64_t sites = grid->oSites(); | ||||
|    | ||||
| #ifdef GRID_NVCC | ||||
|   // GPU | ||||
|   autoView( x_v, x, AcceleratorRead); | ||||
|   autoView( y_v, y, AcceleratorRead); | ||||
|   autoView( z_v, z, AcceleratorWrite); | ||||
| #if 0 | ||||
|   typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|  | ||||
|   accelerator_for( ss, sites, nsimd,{ | ||||
|       auto tmp = a*x_v(ss)+b*y_v(ss); | ||||
|       coalescedWrite(inner_tmp_v[ss],innerProductD(tmp,tmp)); | ||||
|       coalescedWrite(z_v[ss],tmp); | ||||
|   }); | ||||
|   nrm = real(TensorRemove(sum(inner_tmp_v,sites))); | ||||
| #else | ||||
|   typedef decltype(innerProduct(x_v[0],y_v[0])) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
| @@ -185,26 +341,49 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt | ||||
|       coalescedWrite(inner_tmp_v[ss],innerProduct(tmp,tmp)); | ||||
|       coalescedWrite(z_v[ss],tmp); | ||||
|   }); | ||||
|  | ||||
|   nrm = real(TensorRemove(sumD_gpu(inner_tmp_v,sites))); | ||||
| #else | ||||
|   // CPU  | ||||
|   typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|    | ||||
|   accelerator_for( ss, sites, nsimd,{ | ||||
|       auto tmp = a*x_v(ss)+b*y_v(ss); | ||||
|       inner_tmp_v[ss]=innerProductD(tmp,tmp); | ||||
|       z_v[ss]=tmp; | ||||
|   }); | ||||
|   // Already promoted to double | ||||
|   nrm = real(TensorRemove(sum(inner_tmp_v,sites))); | ||||
|   nrm = real(TensorRemove(sumD(inner_tmp_v,sites))); | ||||
| #endif | ||||
|   grid->GlobalSum(nrm); | ||||
|   return nrm;  | ||||
| } | ||||
|   | ||||
| template<class vobj> strong_inline void | ||||
| innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||
| { | ||||
|   conformable(left,right); | ||||
|  | ||||
|   typedef typename vobj::vector_typeD vector_type; | ||||
|   Vector<ComplexD> tmp(2); | ||||
|  | ||||
|   GridBase *grid = left.Grid(); | ||||
|  | ||||
|   const uint64_t nsimd = grid->Nsimd(); | ||||
|   const uint64_t sites = grid->oSites(); | ||||
|  | ||||
|   // GPU | ||||
|   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||
|   typedef decltype(innerProductD(vobj(),vobj())) norm_t; | ||||
|   Vector<inner_t> inner_tmp(sites); | ||||
|   Vector<norm_t>  norm_tmp(sites); | ||||
|   auto inner_tmp_v = &inner_tmp[0]; | ||||
|   auto norm_tmp_v = &norm_tmp[0]; | ||||
|   { | ||||
|     autoView(left_v,left, AcceleratorRead); | ||||
|     autoView(right_v,right,AcceleratorRead); | ||||
|     accelerator_for( ss, sites, 1,{ | ||||
| 	auto left_tmp = left_v[ss]; | ||||
| 	inner_tmp_v[ss]=innerProductD(left_tmp,right_v[ss]); | ||||
|         norm_tmp_v [ss]=innerProductD(left_tmp,left_tmp); | ||||
|       }); | ||||
|   } | ||||
|  | ||||
|   tmp[0] = TensorRemove(sum(inner_tmp_v,sites)); | ||||
|   tmp[1] = TensorRemove(sum(norm_tmp_v,sites)); | ||||
|  | ||||
|   grid->GlobalSumVector(&tmp[0],2); // keep norm Complex -> can use GlobalSumVector | ||||
|   ip = tmp[0]; | ||||
|   nrm = real(tmp[1]); | ||||
| } | ||||
|  | ||||
| template<class Op,class T1> | ||||
| inline auto sum(const LatticeUnaryExpression<Op,T1> & expr) | ||||
| @@ -243,6 +422,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | ||||
|   // But easily avoided by using double precision fields | ||||
|   /////////////////////////////////////////////////////// | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_object::scalar_type scalar_type; | ||||
|   GridBase  *grid = Data.Grid(); | ||||
|   assert(grid!=NULL); | ||||
|  | ||||
| @@ -271,7 +451,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | ||||
|  | ||||
|   // sum over reduced dimension planes, breaking out orthog dir | ||||
|   // Parallel over orthog direction | ||||
|   auto Data_v=Data.View(); | ||||
|   autoView( Data_v, Data, CpuRead); | ||||
|   thread_for( r,rd, { | ||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||
|     for(int n=0;n<e1;n++){ | ||||
| @@ -301,20 +481,27 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | ||||
|   } | ||||
|    | ||||
|   // sum over nodes. | ||||
|   sobj gsum; | ||||
|   for(int t=0;t<fd;t++){ | ||||
|     int pt = t/ld; // processor plane | ||||
|     int lt = t%ld; | ||||
|     if ( pt == grid->_processor_coor[orthogdim] ) { | ||||
|       gsum=lsSum[lt]; | ||||
|       result[t]=lsSum[lt]; | ||||
|     } else { | ||||
|       gsum=Zero(); | ||||
|       result[t]=Zero(); | ||||
|     } | ||||
|  | ||||
|     grid->GlobalSum(gsum); | ||||
|  | ||||
|     result[t]=gsum; | ||||
|   } | ||||
|   scalar_type * ptr = (scalar_type *) &result[0]; | ||||
|   int words = fd*sizeof(sobj)/sizeof(scalar_type); | ||||
|   grid->GlobalSumVector(ptr, words); | ||||
| } | ||||
| template<class vobj> inline | ||||
| std::vector<typename vobj::scalar_object>  | ||||
| sliceSum(const Lattice<vobj> &Data,int orthogdim) | ||||
| { | ||||
|   std::vector<typename vobj::scalar_object> result; | ||||
|   sliceSum(Data,result,orthogdim); | ||||
|   return result; | ||||
| } | ||||
|  | ||||
| template<class vobj> | ||||
| @@ -349,8 +536,8 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti | ||||
|   int e2=    grid->_slice_block [orthogdim]; | ||||
|   int stride=grid->_slice_stride[orthogdim]; | ||||
|  | ||||
|   auto lhv=lhs.View(); | ||||
|   auto rhv=rhs.View(); | ||||
|   autoView( lhv, lhs, CpuRead); | ||||
|   autoView( rhv, rhs, CpuRead); | ||||
|   thread_for( r,rd,{ | ||||
|  | ||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||
| @@ -421,6 +608,7 @@ template<class vobj> | ||||
| static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice<vobj> &X,const Lattice<vobj> &Y, | ||||
| 			    int orthogdim,RealD scale=1.0)  | ||||
| { | ||||
|   // perhaps easier to just promote A to a field and use regular madd | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
| @@ -451,20 +639,17 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice | ||||
|     for(int l=0;l<Nsimd;l++){ | ||||
|       grid->iCoorFromIindex(icoor,l); | ||||
|       int ldx =r+icoor[orthogdim]*rd; | ||||
|       scalar_type *as =(scalar_type *)&av; | ||||
|       as[l] = scalar_type(a[ldx])*zscale; | ||||
|       av.putlane(scalar_type(a[ldx])*zscale,l); | ||||
|     } | ||||
|  | ||||
|     tensor_reduced at; at=av; | ||||
|  | ||||
|     auto Rv=R.View(); | ||||
|     auto Xv=X.View(); | ||||
|     auto Yv=Y.View(); | ||||
|     thread_for_collapse(2, n, e1, { | ||||
|       for(int b=0;b<e2;b++){ | ||||
|     autoView( Rv, R, CpuWrite); | ||||
|     autoView( Xv, X, CpuRead); | ||||
|     autoView( Yv, Y, CpuRead); | ||||
|     thread_for2d( n, e1, b,e2, { | ||||
| 	int ss= so+n*stride+b; | ||||
| 	Rv[ss] = at*Xv[ss]+Yv[ss]; | ||||
|       } | ||||
|     }); | ||||
|   } | ||||
| }; | ||||
| @@ -494,7 +679,6 @@ template<class vobj> | ||||
| static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,const Lattice<vobj> &Y,int Orthog,RealD scale=1.0)  | ||||
| {     | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||
| @@ -517,9 +701,9 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | ||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||
|   int ostride=FullGrid->_ostride[Orthog]; | ||||
|  | ||||
|   auto X_v=X.View(); | ||||
|   auto Y_v=Y.View(); | ||||
|   auto R_v=R.View(); | ||||
|   autoView( X_v, X, CpuRead); | ||||
|   autoView( Y_v, Y, CpuRead); | ||||
|   autoView( R_v, R, CpuWrite); | ||||
|   thread_region | ||||
|   { | ||||
|     Vector<vobj> s_x(Nblock); | ||||
| @@ -548,7 +732,6 @@ template<class vobj> | ||||
| static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,int Orthog,RealD scale=1.0)  | ||||
| {     | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||
| @@ -564,13 +747,14 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | ||||
|   //  int nl=1; | ||||
|  | ||||
|   //FIXME package in a convenient iterator | ||||
|   // thread_for2d_in_region | ||||
|   //Should loop over a plane orthogonal to direction "Orthog" | ||||
|   int stride=FullGrid->_slice_stride[Orthog]; | ||||
|   int block =FullGrid->_slice_block [Orthog]; | ||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||
|   int ostride=FullGrid->_ostride[Orthog]; | ||||
|   auto R_v = R.View(); | ||||
|   auto X_v = X.View(); | ||||
|   autoView( R_v, R, CpuWrite); | ||||
|   autoView( X_v, X, CpuRead); | ||||
|   thread_region | ||||
|   { | ||||
|     std::vector<vobj> s_x(Nblock); | ||||
| @@ -601,7 +785,6 @@ template<class vobj> | ||||
| static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int Orthog)  | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|    | ||||
|   GridBase *FullGrid  = lhs.Grid(); | ||||
| @@ -628,8 +811,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | ||||
|  | ||||
|   typedef typename vobj::vector_typeD vector_typeD; | ||||
|  | ||||
|   auto lhs_v=lhs.View(); | ||||
|   auto rhs_v=rhs.View(); | ||||
|   autoView( lhs_v, lhs, CpuRead); | ||||
|   autoView( rhs_v, rhs, CpuRead); | ||||
|   thread_region | ||||
|   { | ||||
|     std::vector<vobj> Left(Nblock); | ||||
|   | ||||
| @@ -1,7 +1,14 @@ | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define WARP_SIZE 32 | ||||
| #ifdef GRID_HIP | ||||
| extern hipDeviceProp_t *gpu_props; | ||||
| #define WARP_SIZE 64 | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
| extern cudaDeviceProp *gpu_props; | ||||
| #define WARP_SIZE 32 | ||||
| #endif | ||||
|  | ||||
| __device__ unsigned int retirementCount = 0; | ||||
|  | ||||
| template <class Iterator> | ||||
| @@ -16,23 +23,27 @@ unsigned int nextPow2(Iterator x) { | ||||
| } | ||||
|  | ||||
| template <class Iterator> | ||||
| void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) { | ||||
| int getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) { | ||||
|    | ||||
|   int device; | ||||
| #ifdef GRID_CUDA | ||||
|   cudaGetDevice(&device); | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|   hipGetDevice(&device); | ||||
| #endif | ||||
|    | ||||
|   Iterator warpSize            = gpu_props[device].warpSize; | ||||
|   Iterator sharedMemPerBlock   = gpu_props[device].sharedMemPerBlock; | ||||
|   Iterator maxThreadsPerBlock  = gpu_props[device].maxThreadsPerBlock; | ||||
|   Iterator multiProcessorCount = gpu_props[device].multiProcessorCount; | ||||
|    | ||||
|   /*   | ||||
|   std::cout << GridLogDebug << "GPU has:" << std::endl; | ||||
|   std::cout << GridLogDebug << "\twarpSize            = " << warpSize << std::endl; | ||||
|   std::cout << GridLogDebug << "\tsharedMemPerBlock   = " << sharedMemPerBlock << std::endl; | ||||
|   std::cout << GridLogDebug << "\tmaxThreadsPerBlock  = " << maxThreadsPerBlock << std::endl; | ||||
|   std::cout << GridLogDebug << "\tmaxThreadsPerBlock  = " << warpSize << std::endl; | ||||
|   std::cout << GridLogDebug << "\tmultiProcessorCount = " << multiProcessorCount << std::endl; | ||||
|    | ||||
|   */   | ||||
|   if (warpSize != WARP_SIZE) { | ||||
|     std::cout << GridLogError << "The warp size of the GPU in use does not match the warp size set when compiling Grid." << std::endl; | ||||
|     exit(EXIT_FAILURE); | ||||
| @@ -40,10 +51,14 @@ void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator | ||||
|    | ||||
|   // let the number of threads in a block be a multiple of 2, starting from warpSize | ||||
|   threads = warpSize; | ||||
|   if ( threads*sizeofsobj > sharedMemPerBlock ) { | ||||
|     std::cout << GridLogError << "The object is too large for the shared memory." << std::endl; | ||||
|     return 0; | ||||
|   } | ||||
|   while( 2*threads*sizeofsobj < sharedMemPerBlock && 2*threads <= maxThreadsPerBlock ) threads *= 2; | ||||
|   // keep all the streaming multiprocessors busy | ||||
|   blocks = nextPow2(multiProcessorCount); | ||||
|    | ||||
|   return 1; | ||||
| } | ||||
|  | ||||
| template <class sobj, class Iterator> | ||||
| @@ -53,7 +68,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | ||||
|    | ||||
|   // cannot use overloaded operators for sobj as they are not volatile-qualified | ||||
|   memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj)); | ||||
|   __syncwarp(); | ||||
|   acceleratorSynchronise(); | ||||
|    | ||||
|   const Iterator VEC = WARP_SIZE; | ||||
|   const Iterator vid = tid & (VEC-1); | ||||
| @@ -67,9 +82,9 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | ||||
|       beta += temp; | ||||
|       memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj)); | ||||
|     } | ||||
|     __syncwarp(); | ||||
|     acceleratorSynchronise(); | ||||
|   } | ||||
|   __syncthreads(); | ||||
|   acceleratorSynchroniseAll(); | ||||
|    | ||||
|   if (threadIdx.x == 0) { | ||||
|     beta  = Zero(); | ||||
| @@ -79,7 +94,7 @@ __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid | ||||
|     } | ||||
|     memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj)); | ||||
|   } | ||||
|   __syncthreads(); | ||||
|   acceleratorSynchroniseAll(); | ||||
| } | ||||
|  | ||||
|  | ||||
| @@ -147,7 +162,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | ||||
|     sobj *smem = (sobj *)shmem_pointer; | ||||
|      | ||||
|     // wait until all outstanding memory instructions in this thread are finished | ||||
|     __threadfence(); | ||||
|     acceleratorFence(); | ||||
|      | ||||
|     if (tid==0) { | ||||
|       unsigned int ticket = atomicInc(&retirementCount, gridDim.x); | ||||
| @@ -156,7 +171,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | ||||
|     } | ||||
|      | ||||
|     // each thread must read the correct value of amLast | ||||
|     __syncthreads(); | ||||
|     acceleratorSynchroniseAll(); | ||||
|  | ||||
|     if (amLast) { | ||||
|       // reduce buffer[0], ..., buffer[gridDim.x-1] | ||||
| @@ -183,7 +198,7 @@ __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | ||||
| // Possibly promote to double and sum | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites)  | ||||
| inline typename vobj::scalar_objectD sumD_gpu_small(const vobj *lat, Integer osites)  | ||||
| { | ||||
|   typedef typename vobj::scalar_objectD sobj; | ||||
|   typedef decltype(lat) Iterator; | ||||
| @@ -192,23 +207,77 @@ inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites) | ||||
|   Integer size = osites*nsimd; | ||||
|  | ||||
|   Integer numThreads, numBlocks; | ||||
|   getNumBlocksAndThreads(size, sizeof(sobj), numThreads, numBlocks); | ||||
|   Integer smemSize = numThreads * sizeof(sobj); | ||||
|   int ok = getNumBlocksAndThreads(size, sizeof(sobj), numThreads, numBlocks); | ||||
|   assert(ok); | ||||
|  | ||||
|   Integer smemSize = numThreads * sizeof(sobj); | ||||
|   // Move out of UVM | ||||
|   // Turns out I had messed up the synchronise after move to compute stream | ||||
|   // as running this on the default stream fools the synchronise | ||||
| #undef UVM_BLOCK_BUFFER   | ||||
| #ifndef UVM_BLOCK_BUFFER   | ||||
|   commVector<sobj> buffer(numBlocks); | ||||
|   sobj *buffer_v = &buffer[0]; | ||||
|   sobj result; | ||||
|   reduceKernel<<< numBlocks, numThreads, smemSize, computeStream >>>(lat, buffer_v, size); | ||||
|   accelerator_barrier(); | ||||
|   acceleratorCopyFromDevice(buffer_v,&result,sizeof(result)); | ||||
| #else | ||||
|   Vector<sobj> buffer(numBlocks); | ||||
|   sobj *buffer_v = &buffer[0]; | ||||
|    | ||||
|   reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size); | ||||
|   cudaDeviceSynchronize(); | ||||
|    | ||||
|   cudaError err = cudaGetLastError(); | ||||
|   if ( cudaSuccess != err ) { | ||||
|     printf("Cuda error %s\n",cudaGetErrorString( err )); | ||||
|     exit(0); | ||||
|   } | ||||
|   auto result = buffer_v[0]; | ||||
|   sobj result; | ||||
|   reduceKernel<<< numBlocks, numThreads, smemSize, computeStream >>>(lat, buffer_v, size); | ||||
|   accelerator_barrier(); | ||||
|   result = *buffer_v; | ||||
| #endif | ||||
|   return result; | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu_large(const vobj *lat, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::vector_type  vector; | ||||
|   typedef typename vobj::scalar_typeD scalarD; | ||||
|   typedef typename vobj::scalar_objectD sobj; | ||||
|   sobj ret; | ||||
|   scalarD *ret_p = (scalarD *)&ret; | ||||
|    | ||||
|   const int words = sizeof(vobj)/sizeof(vector); | ||||
|  | ||||
|   Vector<vector> buffer(osites); | ||||
|   vector *dat = (vector *)lat; | ||||
|   vector *buf = &buffer[0]; | ||||
|   iScalar<vector> *tbuf =(iScalar<vector> *)  &buffer[0]; | ||||
|   for(int w=0;w<words;w++) { | ||||
|  | ||||
|     accelerator_for(ss,osites,1,{ | ||||
| 	buf[ss] = dat[ss*words+w]; | ||||
|       }); | ||||
|        | ||||
|     ret_p[w] = sumD_gpu_small(tbuf,osites); | ||||
|   } | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::scalar_objectD sobj; | ||||
|   sobj ret; | ||||
|    | ||||
|   Integer nsimd= vobj::Nsimd(); | ||||
|   Integer size = osites*nsimd; | ||||
|   Integer numThreads, numBlocks; | ||||
|   int ok = getNumBlocksAndThreads(size, sizeof(sobj), numThreads, numBlocks); | ||||
|    | ||||
|   if ( ok ) { | ||||
|     ret = sumD_gpu_small(lat,osites); | ||||
|   } else { | ||||
|     ret = sumD_gpu_large(lat,osites); | ||||
|   } | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Return as same precision as input performing reduction in double precision though | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -221,6 +290,13 @@ inline typename vobj::scalar_object sum_gpu(const vobj *lat, Integer osites) | ||||
|   return result; | ||||
| } | ||||
|  | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_object sum_gpu_large(const vobj *lat, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   sobj result; | ||||
|   result = sumD_gpu_large(lat,osites); | ||||
|   return result; | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|   | ||||
							
								
								
									
										125
									
								
								Grid/lattice/Lattice_reduction_sycl.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										125
									
								
								Grid/lattice/Lattice_reduction_sycl.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,125 @@ | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Possibly promote to double and sum | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu_tensor(const vobj *lat, Integer osites)  | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_objectD sobjD; | ||||
|   sobj *mysum =(sobj *) malloc_shared(sizeof(sobj),*theGridAccelerator); | ||||
|   sobj identity; zeroit(identity); | ||||
|   sobj ret ;  | ||||
|  | ||||
|   Integer nsimd= vobj::Nsimd(); | ||||
|    | ||||
|   theGridAccelerator->submit([&](cl::sycl::handler &cgh) { | ||||
|      auto Reduction = cl::sycl::reduction(mysum,identity,std::plus<>()); | ||||
|      cgh.parallel_for(cl::sycl::range<1>{osites}, | ||||
| 		      Reduction, | ||||
| 		      [=] (cl::sycl::id<1> item, auto &sum) { | ||||
|       auto osite   = item[0]; | ||||
|       sum +=Reduce(lat[osite]); | ||||
|      }); | ||||
|    }); | ||||
|   theGridAccelerator->wait(); | ||||
|   ret = mysum[0]; | ||||
|   free(mysum,*theGridAccelerator); | ||||
|   sobjD dret; convertType(dret,ret); | ||||
|   return dret; | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu_large(const vobj *lat, Integer osites) | ||||
| { | ||||
|   return sumD_gpu_tensor(lat,osites); | ||||
| } | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu_small(const vobj *lat, Integer osites) | ||||
| { | ||||
|   return sumD_gpu_large(lat,osites); | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites) | ||||
| { | ||||
|   return sumD_gpu_large(lat,osites); | ||||
| } | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Return as same precision as input performing reduction in double precision though | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_object sum_gpu(const vobj *lat, Integer osites)  | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   sobj result; | ||||
|   result = sumD_gpu(lat,osites); | ||||
|   return result; | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_object sum_gpu_large(const vobj *lat, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   sobj result; | ||||
|   result = sumD_gpu_large(lat,osites); | ||||
|   return result; | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| /* | ||||
| template<class Double> Double svm_reduce(Double *vec,uint64_t L) | ||||
| { | ||||
|   Double sumResult; zeroit(sumResult); | ||||
|   Double *d_sum =(Double *)cl::sycl::malloc_shared(sizeof(Double),*theGridAccelerator); | ||||
|   Double identity;  zeroit(identity); | ||||
|   theGridAccelerator->submit([&](cl::sycl::handler &cgh) { | ||||
|      auto Reduction = cl::sycl::reduction(d_sum,identity,std::plus<>()); | ||||
|      cgh.parallel_for(cl::sycl::range<1>{L}, | ||||
| 		      Reduction, | ||||
| 		      [=] (cl::sycl::id<1> index, auto &sum) { | ||||
| 	 sum +=vec[index]; | ||||
|      }); | ||||
|    }); | ||||
|   theGridAccelerator->wait(); | ||||
|   Double ret = d_sum[0]; | ||||
|   free(d_sum,*theGridAccelerator); | ||||
|   std::cout << " svm_reduce finished "<<L<<" sites sum = " << ret <<std::endl; | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| template <class vobj> | ||||
| inline typename vobj::scalar_objectD sumD_gpu_repack(const vobj *lat, Integer osites) | ||||
| { | ||||
|   typedef typename vobj::vector_type  vector; | ||||
|   typedef typename vobj::scalar_type  scalar; | ||||
|  | ||||
|   typedef typename vobj::scalar_typeD scalarD; | ||||
|   typedef typename vobj::scalar_objectD sobjD; | ||||
|  | ||||
|   sobjD ret; | ||||
|   scalarD *ret_p = (scalarD *)&ret; | ||||
|    | ||||
|   const int nsimd = vobj::Nsimd(); | ||||
|   const int words = sizeof(vobj)/sizeof(vector); | ||||
|  | ||||
|   Vector<scalar> buffer(osites*nsimd); | ||||
|   scalar *buf = &buffer[0]; | ||||
|   vector *dat = (vector *)lat; | ||||
|  | ||||
|   for(int w=0;w<words;w++) { | ||||
|  | ||||
|     accelerator_for(ss,osites,nsimd,{ | ||||
| 	int lane = acceleratorSIMTlane(nsimd); | ||||
| 	buf[ss*nsimd+lane] = dat[ss*words+w].getlane(lane); | ||||
|     }); | ||||
|     //Precision change at this point is to late to gain precision | ||||
|     ret_p[w] = svm_reduce(buf,nsimd*osites); | ||||
|   } | ||||
|   return ret; | ||||
| } | ||||
| */ | ||||
| @@ -375,7 +375,7 @@ public: | ||||
|     int osites = _grid->oSites();  // guaranteed to be <= l.Grid()->oSites() by a factor multiplicity | ||||
|     int words  = sizeof(scalar_object) / sizeof(scalar_type); | ||||
|  | ||||
|     auto l_v = l.View(); | ||||
|     autoView(l_v, l, CpuWrite); | ||||
|     thread_for( ss, osites, { | ||||
|       ExtractBuffer<scalar_object> buf(Nsimd); | ||||
|       for (int m = 0; m < multiplicity; m++) {  // Draw from same generator multiplicity times | ||||
| @@ -424,9 +424,33 @@ public: | ||||
|     // MT implementation does not implement fast discard even though | ||||
|     // in principle this is possible | ||||
|     //////////////////////////////////////////////// | ||||
| #if 1 | ||||
|     thread_for( lidx, _grid->lSites(), { | ||||
|  | ||||
| 	int gidx; | ||||
| 	int o_idx; | ||||
| 	int i_idx; | ||||
| 	int rank; | ||||
| 	Coordinate pcoor; | ||||
| 	Coordinate lcoor; | ||||
| 	Coordinate gcoor; | ||||
| 	_grid->LocalIndexToLocalCoor(lidx,lcoor); | ||||
| 	pcoor=_grid->ThisProcessorCoor(); | ||||
| 	_grid->ProcessorCoorLocalCoorToGlobalCoor(pcoor,lcoor,gcoor); | ||||
| 	_grid->GlobalCoorToGlobalIndex(gcoor,gidx); | ||||
|  | ||||
| 	_grid->GlobalCoorToRankIndex(rank,o_idx,i_idx,gcoor); | ||||
|  | ||||
| 	assert(rank == _grid->ThisRank() ); | ||||
| 	 | ||||
| 	int l_idx=generator_idx(o_idx,i_idx); | ||||
| 	_generators[l_idx] = master_engine; | ||||
| 	Skip(_generators[l_idx],gidx); // Skip to next RNG sequence | ||||
|     }); | ||||
| #else | ||||
|     // Everybody loops over global volume. | ||||
|     thread_for( gidx, _grid->_gsites, { | ||||
|  | ||||
| 	// Where is it? | ||||
| 	int rank; | ||||
| 	int o_idx; | ||||
| @@ -443,6 +467,7 @@ public: | ||||
| 	  Skip(_generators[l_idx],gidx); // Skip to next RNG sequence | ||||
| 	} | ||||
|     }); | ||||
| #endif | ||||
| #else  | ||||
|     //////////////////////////////////////////////////////////////// | ||||
|     // Machine and thread decomposition dependent seeding is efficient | ||||
| @@ -462,7 +487,7 @@ public: | ||||
|  | ||||
|     { | ||||
|       // Obtain one reseeded generator per thread       | ||||
|       int Nthread = GridThread::GetThreads(); | ||||
|       int Nthread = 32; // Hardwire a good level or parallelism | ||||
|       std::vector<RngEngine> seeders(Nthread); | ||||
|       for(int t=0;t<Nthread;t++){ | ||||
| 	seeders[t] = Reseed(master_engine); | ||||
|   | ||||
| @@ -37,17 +37,19 @@ NAMESPACE_BEGIN(Grid); | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Trace | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| /* | ||||
| template<class vobj> | ||||
| inline auto trace(const Lattice<vobj> &lhs)  -> Lattice<decltype(trace(vobj()))> | ||||
| { | ||||
|   Lattice<decltype(trace(vobj()))> ret(lhs.Grid()); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView(ret_v , ret, AcceleratorWrite); | ||||
|   autoView(lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||
|     coalescedWrite(ret_v[ss], trace(lhs_v(ss))); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
| */ | ||||
|      | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Trace Index level dependent operation | ||||
| @@ -56,8 +58,8 @@ template<int Index,class vobj> | ||||
| inline auto TraceIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(traceIndex<Index>(vobj()))> | ||||
| { | ||||
|   Lattice<decltype(traceIndex<Index>(vobj()))> ret(lhs.Grid()); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v , ret, AcceleratorWrite); | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||
|     coalescedWrite(ret_v[ss], traceIndex<Index>(lhs_v(ss))); | ||||
|   }); | ||||
|   | ||||
| @@ -6,6 +6,7 @@ | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <christoph@lhnr.de> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -46,11 +47,12 @@ inline void subdivides(GridBase *coarse,GridBase *fine) | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // remove and insert a half checkerboard | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full){ | ||||
| template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full) | ||||
| { | ||||
|   half.Checkerboard() = cb; | ||||
|  | ||||
|   auto half_v = half.View(); | ||||
|   auto full_v = full.View(); | ||||
|   autoView( half_v, half, CpuWrite); | ||||
|   autoView( full_v, full, CpuRead); | ||||
|   thread_for(ss, full.Grid()->oSites(),{ | ||||
|     int cbos; | ||||
|     Coordinate coor; | ||||
| @@ -63,10 +65,11 @@ template<class vobj> inline void pickCheckerboard(int cb,Lattice<vobj> &half,con | ||||
|     } | ||||
|   }); | ||||
| } | ||||
| template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half){ | ||||
| template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half) | ||||
| { | ||||
|   int cb = half.Checkerboard(); | ||||
|   auto half_v = half.View(); | ||||
|   auto full_v = full.View(); | ||||
|   autoView( half_v , half, CpuRead); | ||||
|   autoView( full_v , full, CpuWrite); | ||||
|   thread_for(ss,full.Grid()->oSites(),{ | ||||
|  | ||||
|     Coordinate coor; | ||||
| @@ -82,94 +85,244 @@ template<class vobj> inline void setCheckerboard(Lattice<vobj> &full,const Latti | ||||
|   }); | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex,int nbasis> | ||||
| template<class vobj> inline void acceleratorPickCheckerboard(int cb,Lattice<vobj> &half,const Lattice<vobj> &full, int checker_dim_half=0) | ||||
| { | ||||
|   half.Checkerboard() = cb; | ||||
|   autoView(half_v, half, AcceleratorWrite); | ||||
|   autoView(full_v, full, AcceleratorRead); | ||||
|   Coordinate rdim_full             = full.Grid()->_rdimensions; | ||||
|   Coordinate rdim_half             = half.Grid()->_rdimensions; | ||||
|   unsigned long ndim_half          = half.Grid()->_ndimension; | ||||
|   Coordinate checker_dim_mask_half = half.Grid()->_checker_dim_mask; | ||||
|   Coordinate ostride_half          = half.Grid()->_ostride; | ||||
|   accelerator_for(ss, full.Grid()->oSites(),full.Grid()->Nsimd(),{ | ||||
|      | ||||
|     Coordinate coor; | ||||
|     int cbos; | ||||
|     int linear=0; | ||||
|  | ||||
|     Lexicographic::CoorFromIndex(coor,ss,rdim_full); | ||||
|     assert(coor.size()==ndim_half); | ||||
|  | ||||
|     for(int d=0;d<ndim_half;d++){  | ||||
|       if(checker_dim_mask_half[d]) linear += coor[d]; | ||||
|     } | ||||
|     cbos = (linear&0x1); | ||||
|  | ||||
|     if (cbos==cb) { | ||||
|       int ssh=0; | ||||
|       for(int d=0;d<ndim_half;d++) { | ||||
|         if (d == checker_dim_half) ssh += ostride_half[d] * ((coor[d] / 2) % rdim_half[d]); | ||||
|         else ssh += ostride_half[d] * (coor[d] % rdim_half[d]); | ||||
|       } | ||||
|       coalescedWrite(half_v[ssh],full_v(ss)); | ||||
|     } | ||||
|   }); | ||||
| } | ||||
| template<class vobj> inline void acceleratorSetCheckerboard(Lattice<vobj> &full,const Lattice<vobj> &half, int checker_dim_half=0) | ||||
| { | ||||
|   int cb = half.Checkerboard(); | ||||
|   autoView(half_v , half, AcceleratorRead); | ||||
|   autoView(full_v , full, AcceleratorWrite); | ||||
|   Coordinate rdim_full             = full.Grid()->_rdimensions; | ||||
|   Coordinate rdim_half             = half.Grid()->_rdimensions; | ||||
|   unsigned long ndim_half          = half.Grid()->_ndimension; | ||||
|   Coordinate checker_dim_mask_half = half.Grid()->_checker_dim_mask; | ||||
|   Coordinate ostride_half          = half.Grid()->_ostride; | ||||
|   accelerator_for(ss,full.Grid()->oSites(),full.Grid()->Nsimd(),{ | ||||
|  | ||||
|     Coordinate coor; | ||||
|     int cbos; | ||||
|     int linear=0; | ||||
|    | ||||
|     Lexicographic::CoorFromIndex(coor,ss,rdim_full); | ||||
|     assert(coor.size()==ndim_half); | ||||
|  | ||||
|     for(int d=0;d<ndim_half;d++){  | ||||
|       if(checker_dim_mask_half[d]) linear += coor[d]; | ||||
|     } | ||||
|     cbos = (linear&0x1); | ||||
|  | ||||
|     if (cbos==cb) { | ||||
|       int ssh=0; | ||||
|       for(int d=0;d<ndim_half;d++){ | ||||
|         if (d == checker_dim_half) ssh += ostride_half[d] * ((coor[d] / 2) % rdim_half[d]); | ||||
|         else ssh += ostride_half[d] * (coor[d] % rdim_half[d]); | ||||
|       } | ||||
|       coalescedWrite(full_v[ss],half_v(ssh)); | ||||
|     } | ||||
|  | ||||
|   }); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Flexible Type Conversion for internal promotion to double as well as graceful | ||||
| // treatment of scalar-compatible types | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| accelerator_inline void convertType(ComplexD & out, const std::complex<double> & in) { | ||||
|   out = in; | ||||
| } | ||||
|  | ||||
| accelerator_inline void convertType(ComplexF & out, const std::complex<float> & in) { | ||||
|   out = in; | ||||
| } | ||||
|  | ||||
| template<typename T> | ||||
| accelerator_inline EnableIf<isGridFundamental<T>> convertType(T & out, const T & in) { | ||||
|   out = in; | ||||
| } | ||||
|  | ||||
| // This would allow for conversions between GridFundamental types, but is not strictly needed as yet | ||||
| /*template<typename T1, typename T2> | ||||
| accelerator_inline typename std::enable_if<isGridFundamental<T1>::value && isGridFundamental<T2>::value>::type | ||||
| // Or to make this very broad, conversions between anything that's not a GridTensor could be allowed | ||||
| //accelerator_inline typename std::enable_if<!isGridTensor<T1>::value && !isGridTensor<T2>::value>::type | ||||
| convertType(T1 & out, const T2 & in) { | ||||
|   out = in; | ||||
| }*/ | ||||
|  | ||||
| #ifdef GRID_SIMT | ||||
| accelerator_inline void convertType(vComplexF & out, const ComplexF & in) { | ||||
|   ((ComplexF*)&out)[acceleratorSIMTlane(vComplexF::Nsimd())] = in; | ||||
| } | ||||
| accelerator_inline void convertType(vComplexD & out, const ComplexD & in) { | ||||
|   ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd())] = in; | ||||
| } | ||||
| accelerator_inline void convertType(vComplexD2 & out, const ComplexD & in) { | ||||
|   ((ComplexD*)&out)[acceleratorSIMTlane(vComplexD::Nsimd()*2)] = in; | ||||
| } | ||||
| #endif | ||||
|  | ||||
| accelerator_inline void convertType(vComplexF & out, const vComplexD2 & in) { | ||||
|   precisionChange(out,in); | ||||
| } | ||||
|  | ||||
| accelerator_inline void convertType(vComplexD2 & out, const vComplexF & in) { | ||||
|   precisionChange(out,in); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2> | ||||
| accelerator_inline void convertType(iScalar<T1> & out, const iScalar<T2> & in) { | ||||
|   convertType(out._internal,in._internal); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2> | ||||
| accelerator_inline NotEnableIf<isGridScalar<T1>> convertType(T1 & out, const iScalar<T2> & in) { | ||||
|   convertType(out,in._internal); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2> | ||||
| accelerator_inline NotEnableIf<isGridScalar<T2>> convertType(iScalar<T1> & out, const T2 & in) { | ||||
|   convertType(out._internal,in); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2,int N> | ||||
| accelerator_inline void convertType(iMatrix<T1,N> & out, const iMatrix<T2,N> & in) { | ||||
|   for (int i=0;i<N;i++) | ||||
|     for (int j=0;j<N;j++) | ||||
|       convertType(out._internal[i][j],in._internal[i][j]); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2,int N> | ||||
| accelerator_inline void convertType(iVector<T1,N> & out, const iVector<T2,N> & in) { | ||||
|   for (int i=0;i<N;i++) | ||||
|     convertType(out._internal[i],in._internal[i]); | ||||
| } | ||||
|  | ||||
| template<typename T1,typename T2> | ||||
| accelerator_inline void convertType(Lattice<T1> & out, const Lattice<T2> & in) { | ||||
|   autoView( out_v , out,AcceleratorWrite); | ||||
|   autoView( in_v  , in ,AcceleratorRead); | ||||
|   accelerator_for(ss,out_v.size(),T1::Nsimd(),{ | ||||
|       convertType(out_v[ss],in_v(ss)); | ||||
|   }); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // precision-promoted local inner product | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class vobj> | ||||
| inline auto localInnerProductD(const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) | ||||
| -> Lattice<iScalar<decltype(TensorRemove(innerProductD2(lhs.View(CpuRead)[0],rhs.View(CpuRead)[0])))>> | ||||
| { | ||||
|   autoView( lhs_v , lhs, AcceleratorRead); | ||||
|   autoView( rhs_v , rhs, AcceleratorRead); | ||||
|  | ||||
|   typedef decltype(TensorRemove(innerProductD2(lhs_v[0],rhs_v[0]))) t_inner; | ||||
|   Lattice<iScalar<t_inner>> ret(lhs.Grid()); | ||||
|  | ||||
|   { | ||||
|     autoView(ret_v, ret,AcceleratorWrite); | ||||
|     accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||
|       convertType(ret_v[ss],innerProductD2(lhs_v(ss),rhs_v(ss))); | ||||
|     }); | ||||
|   } | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // block routines | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class vobj,class CComplex,int nbasis,class VLattice> | ||||
| inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
| 			   const             Lattice<vobj>   &fineData, | ||||
| 			  const std::vector<Lattice<vobj> > &Basis) | ||||
| 			   const VLattice &Basis) | ||||
| { | ||||
|   GridBase * fine  = fineData.Grid(); | ||||
|   GridBase * coarse= coarseData.Grid(); | ||||
|  | ||||
|   Lattice<CComplex> ip(coarse);  | ||||
|   Lattice<iScalar<CComplex>> ip(coarse); | ||||
|   Lattice<vobj>     fineDataRed = fineData; | ||||
|  | ||||
|   //  auto fineData_   = fineData.View(); | ||||
|   auto coarseData_ = coarseData.View(); | ||||
|   auto ip_         = ip.View(); | ||||
|   autoView( coarseData_ , coarseData, AcceleratorWrite); | ||||
|   autoView( ip_         , ip,         AcceleratorWrite); | ||||
|   for(int v=0;v<nbasis;v++) { | ||||
|     blockInnerProduct(ip,Basis[v],fineData); | ||||
|     blockInnerProductD(ip,Basis[v],fineDataRed); // ip = <basis|fine> | ||||
|     accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), { | ||||
| 	coalescedWrite(coarseData_[sc](v),ip_(sc)); | ||||
| 	convertType(coarseData_[sc](v),ip_[sc]); | ||||
|     }); | ||||
|  | ||||
|     // improve numerical stability of projection | ||||
|     // |fine> = |fine> - <basis|fine> |basis> | ||||
|     ip=-ip; | ||||
|     blockZAXPY(fineDataRed,ip,Basis[v],fineDataRed);  | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex,int nbasis> | ||||
| inline void blockProject1(Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
| 			 const             Lattice<vobj>   &fineData, | ||||
| 			 const std::vector<Lattice<vobj> > &Basis) | ||||
| template<class vobj,class CComplex,int nbasis,class VLattice> | ||||
| inline void batchBlockProject(std::vector<Lattice<iVector<CComplex,nbasis>>> &coarseData, | ||||
|                                const std::vector<Lattice<vobj>> &fineData, | ||||
|                                const VLattice &Basis) | ||||
| { | ||||
|   typedef iVector<CComplex,nbasis > coarseSiteData; | ||||
|   coarseSiteData elide; | ||||
|   typedef decltype(coalescedRead(elide)) ScalarComplex; | ||||
|   GridBase * fine  = fineData.Grid(); | ||||
|   GridBase * coarse= coarseData.Grid(); | ||||
|   int  _ndimension = coarse->_ndimension; | ||||
|   int NBatch = fineData.size(); | ||||
|   assert(coarseData.size() == NBatch); | ||||
|  | ||||
|   // checks | ||||
|   assert( nbasis == Basis.size() ); | ||||
|   subdivides(coarse,fine);  | ||||
|   for(int i=0;i<nbasis;i++){ | ||||
|     conformable(Basis[i],fineData); | ||||
|   } | ||||
|   GridBase * fine  = fineData[0].Grid(); | ||||
|   GridBase * coarse= coarseData[0].Grid(); | ||||
|  | ||||
|   Coordinate block_r      (_ndimension); | ||||
|   Lattice<iScalar<CComplex>> ip(coarse); | ||||
|   std::vector<Lattice<vobj>> fineDataCopy = fineData; | ||||
|  | ||||
|   for(int d=0 ; d<_ndimension;d++){ | ||||
|     block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d]; | ||||
|     assert(block_r[d]*coarse->_rdimensions[d] == fine->_rdimensions[d]); | ||||
|   } | ||||
|   int blockVol = fine->oSites()/coarse->oSites(); | ||||
|  | ||||
|   coarseData=Zero(); | ||||
|  | ||||
|   auto fineData_   = fineData.View(); | ||||
|   auto coarseData_ = coarseData.View(); | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // To make this lock free, loop over coars parallel, and then loop over fine associated with coarse. | ||||
|   // Otherwise do fine inner product per site, and make the update atomic | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   accelerator_for( sci, nbasis*coarse->oSites(), vobj::Nsimd(), { | ||||
|  | ||||
|     auto sc=sci/nbasis; | ||||
|     auto i=sci%nbasis; | ||||
|     auto Basis_      = Basis[i].View(); | ||||
|  | ||||
|     Coordinate coor_c(_ndimension); | ||||
|     Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate | ||||
|  | ||||
|     int sf; | ||||
|     decltype(innerProduct(Basis_(sf),fineData_(sf))) reduce=Zero(); | ||||
|  | ||||
|     for(int sb=0;sb<blockVol;sb++){ | ||||
|  | ||||
|       Coordinate coor_b(_ndimension); | ||||
|       Coordinate coor_f(_ndimension); | ||||
|  | ||||
|       Lexicographic::CoorFromIndex(coor_b,sb,block_r); | ||||
|       for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d]+coor_b[d]; | ||||
|       Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions); | ||||
|        | ||||
|       reduce=reduce+innerProduct(Basis_(sf),fineData_(sf)); | ||||
|     } | ||||
|     coalescedWrite(coarseData_[sc](i),reduce); | ||||
|   autoView(ip_, ip, AcceleratorWrite); | ||||
|   for(int v=0;v<nbasis;v++) { | ||||
|     for (int k=0; k<NBatch; k++) { | ||||
|       autoView( coarseData_ , coarseData[k], AcceleratorWrite); | ||||
|       blockInnerProductD(ip,Basis[v],fineDataCopy[k]); // ip = <basis|fine> | ||||
|       accelerator_for( sc, coarse->oSites(), vobj::Nsimd(), { | ||||
|         convertType(coarseData_[sc](v),ip_[sc]); | ||||
|       }); | ||||
|   return; | ||||
|  | ||||
|       // improve numerical stability of projection | ||||
|       // |fine> = |fine> - <basis|fine> |basis> | ||||
|       ip=-ip; | ||||
|       blockZAXPY(fineDataCopy[k],ip,Basis[v],fineDataCopy[k]);  | ||||
|     } | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
| inline void blockZAXPY(Lattice<vobj> &fineZ, | ||||
| template<class vobj,class vobj2,class CComplex> | ||||
|   inline void blockZAXPY(Lattice<vobj> &fineZ, | ||||
| 			 const Lattice<CComplex> &coarseA, | ||||
| 		       const Lattice<vobj> &fineX, | ||||
| 			 const Lattice<vobj2> &fineX, | ||||
| 			 const Lattice<vobj> &fineY) | ||||
| { | ||||
|   GridBase * fine  = fineZ.Grid(); | ||||
| @@ -191,10 +344,12 @@ inline void blockZAXPY(Lattice<vobj> &fineZ, | ||||
|     assert(block_r[d]*coarse->_rdimensions[d]==fine->_rdimensions[d]); | ||||
|   } | ||||
|  | ||||
|   auto fineZ_  = fineZ.View(); | ||||
|   auto fineX_  = fineX.View(); | ||||
|   auto fineY_  = fineY.View(); | ||||
|   auto coarseA_= coarseA.View(); | ||||
|   autoView( fineZ_  , fineZ, AcceleratorWrite); | ||||
|   autoView( fineX_  , fineX, AcceleratorRead); | ||||
|   autoView( fineY_  , fineY, AcceleratorRead); | ||||
|   autoView( coarseA_, coarseA, AcceleratorRead); | ||||
|   Coordinate fine_rdimensions = fine->_rdimensions; | ||||
|   Coordinate coarse_rdimensions = coarse->_rdimensions; | ||||
|  | ||||
|   accelerator_for(sf, fine->oSites(), CComplex::Nsimd(), { | ||||
|  | ||||
| @@ -202,18 +357,55 @@ inline void blockZAXPY(Lattice<vobj> &fineZ, | ||||
|       Coordinate coor_c(_ndimension); | ||||
|       Coordinate coor_f(_ndimension); | ||||
|  | ||||
|     Lexicographic::CoorFromIndex(coor_f,sf,fine->_rdimensions); | ||||
|       Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions); | ||||
|       for(int d=0;d<_ndimension;d++) coor_c[d]=coor_f[d]/block_r[d]; | ||||
|     Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions); | ||||
|       Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions); | ||||
|  | ||||
|       // z = A x + y | ||||
|     coalescedWrite(fineZ_[sf],coarseA_(sc)*fineX_(sf)+fineY_(sf)); | ||||
| #ifdef GRID_SIMT | ||||
|       typename vobj2::tensor_reduced::scalar_object cA; | ||||
|       typename vobj::scalar_object cAx; | ||||
| #else | ||||
|       typename vobj2::tensor_reduced cA; | ||||
|       vobj cAx; | ||||
| #endif | ||||
|       convertType(cA,TensorRemove(coarseA_(sc))); | ||||
|       auto prod = cA*fineX_(sf); | ||||
|       convertType(cAx,prod); | ||||
|       coalescedWrite(fineZ_[sf],cAx+fineY_(sf)); | ||||
|  | ||||
|     }); | ||||
|  | ||||
|   return; | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
|   inline void blockInnerProductD(Lattice<CComplex> &CoarseInner, | ||||
| 				 const Lattice<vobj> &fineX, | ||||
| 				 const Lattice<vobj> &fineY) | ||||
| { | ||||
|   typedef iScalar<decltype(TensorRemove(innerProductD2(vobj(),vobj())))> dotp; | ||||
|  | ||||
|   GridBase *coarse(CoarseInner.Grid()); | ||||
|   GridBase *fine  (fineX.Grid()); | ||||
|  | ||||
|   Lattice<dotp> fine_inner(fine); fine_inner.Checkerboard() = fineX.Checkerboard(); | ||||
|   Lattice<dotp> coarse_inner(coarse); | ||||
|  | ||||
|   // Precision promotion | ||||
|   fine_inner = localInnerProductD<vobj>(fineX,fineY); | ||||
|   blockSum(coarse_inner,fine_inner); | ||||
|   { | ||||
|     autoView( CoarseInner_  , CoarseInner,AcceleratorWrite); | ||||
|     autoView( coarse_inner_ , coarse_inner,AcceleratorRead); | ||||
|     accelerator_for(ss, coarse->oSites(), 1, { | ||||
|       convertType(CoarseInner_[ss], TensorRemove(coarse_inner_[ss])); | ||||
|     }); | ||||
|   } | ||||
|   | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> // deprecate | ||||
| inline void blockInnerProduct(Lattice<CComplex> &CoarseInner, | ||||
| 			      const Lattice<vobj> &fineX, | ||||
| 			      const Lattice<vobj> &fineY) | ||||
| @@ -227,15 +419,17 @@ inline void blockInnerProduct(Lattice<CComplex> &CoarseInner, | ||||
|   Lattice<dotp> coarse_inner(coarse); | ||||
|  | ||||
|   // Precision promotion? | ||||
|   auto CoarseInner_  = CoarseInner.View(); | ||||
|   auto coarse_inner_ = coarse_inner.View(); | ||||
|  | ||||
|   fine_inner = localInnerProduct(fineX,fineY); | ||||
|   blockSum(coarse_inner,fine_inner); | ||||
|   { | ||||
|     autoView( CoarseInner_  , CoarseInner, AcceleratorWrite); | ||||
|     autoView( coarse_inner_ , coarse_inner, AcceleratorRead); | ||||
|     accelerator_for(ss, coarse->oSites(), 1, { | ||||
| 	CoarseInner_[ss] = coarse_inner_[ss]; | ||||
|     }); | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
| inline void blockNormalise(Lattice<CComplex> &ip,Lattice<vobj> &fineX) | ||||
| { | ||||
| @@ -266,15 +460,24 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData) | ||||
|  | ||||
|   // Turn this around to loop threaded over sc and interior loop  | ||||
|   // over sf would thread better | ||||
|   auto coarseData_ = coarseData.View(); | ||||
|   auto fineData_   = fineData.View(); | ||||
|   autoView( coarseData_ , coarseData, AcceleratorWrite); | ||||
|   autoView( fineData_   , fineData, AcceleratorRead); | ||||
|  | ||||
|   auto coarseData_p = &coarseData_[0]; | ||||
|   auto fineData_p = &fineData_[0]; | ||||
|    | ||||
|   Coordinate fine_rdimensions = fine->_rdimensions; | ||||
|   Coordinate coarse_rdimensions = coarse->_rdimensions; | ||||
|  | ||||
|   vobj zz = Zero(); | ||||
|    | ||||
|   accelerator_for(sc,coarse->oSites(),1,{ | ||||
|  | ||||
|       // One thread per sub block | ||||
|       Coordinate coor_c(_ndimension); | ||||
|     Lexicographic::CoorFromIndex(coor_c,sc,coarse->_rdimensions);  // Block coordinate | ||||
|     coarseData_[sc]=Zero(); | ||||
|       Lexicographic::CoorFromIndex(coor_c,sc,coarse_rdimensions);  // Block coordinate | ||||
|  | ||||
|       vobj cd = zz; | ||||
|        | ||||
|       for(int sb=0;sb<blockVol;sb++){ | ||||
|  | ||||
| @@ -283,15 +486,18 @@ inline void blockSum(Lattice<vobj> &coarseData,const Lattice<vobj> &fineData) | ||||
| 	Coordinate coor_f(_ndimension); | ||||
| 	Lexicographic::CoorFromIndex(coor_b,sb,block_r);               // Block sub coordinate | ||||
| 	for(int d=0;d<_ndimension;d++) coor_f[d]=coor_c[d]*block_r[d] + coor_b[d]; | ||||
|       Lexicographic::IndexFromCoor(coor_f,sf,fine->_rdimensions); | ||||
| 	Lexicographic::IndexFromCoor(coor_f,sf,fine_rdimensions); | ||||
|  | ||||
|       coarseData_[sc]=coarseData_[sc]+fineData_[sf]; | ||||
| 	cd=cd+fineData_p[sf]; | ||||
|       } | ||||
|  | ||||
|       coarseData_p[sc] = cd; | ||||
|  | ||||
|     }); | ||||
|   return; | ||||
| } | ||||
|  | ||||
|  | ||||
| template<class vobj> | ||||
| inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vobj> &picked,Coordinate coor) | ||||
| { | ||||
| @@ -313,8 +519,8 @@ inline void blockPick(GridBase *coarse,const Lattice<vobj> &unpicked,Lattice<vob | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
| inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) | ||||
| template<class CComplex,class VLattice> | ||||
| inline void blockOrthonormalize(Lattice<CComplex> &ip,VLattice &Basis) | ||||
| { | ||||
|   GridBase *coarse = ip.Grid(); | ||||
|   GridBase *fine   = Basis[0].Grid(); | ||||
| @@ -330,15 +536,22 @@ inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > | ||||
|   for(int v=0;v<nbasis;v++) { | ||||
|     for(int u=0;u<v;u++) { | ||||
|       //Inner product & remove component | ||||
|       blockInnerProduct(ip,Basis[u],Basis[v]); | ||||
|       blockInnerProductD(ip,Basis[u],Basis[v]); | ||||
|       ip = -ip; | ||||
|       blockZAXPY<vobj,CComplex> (Basis[v],ip,Basis[u],Basis[v]); | ||||
|       blockZAXPY(Basis[v],ip,Basis[u],Basis[v]); | ||||
|     } | ||||
|     blockNormalise(ip,Basis[v]); | ||||
|   } | ||||
| } | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
| inline void blockOrthogonalise(Lattice<CComplex> &ip,std::vector<Lattice<vobj> > &Basis) // deprecated inaccurate naming | ||||
| { | ||||
|   blockOrthonormalize(ip,Basis); | ||||
| } | ||||
|  | ||||
| #if 0 | ||||
| // TODO: CPU optimized version here | ||||
| template<class vobj,class CComplex,int nbasis> | ||||
| inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
| 			 Lattice<vobj>   &fineData, | ||||
| @@ -360,8 +573,8 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
|   for(int d=0 ; d<_ndimension;d++){ | ||||
|     block_r[d] = fine->_rdimensions[d] / coarse->_rdimensions[d]; | ||||
|   } | ||||
|   auto fineData_   = fineData.View(); | ||||
|   auto coarseData_ = coarseData.View(); | ||||
|   autoView( fineData_   , fineData, AcceleratorWrite); | ||||
|   autoView( coarseData_ , coarseData, AcceleratorRead); | ||||
|  | ||||
|   // Loop with a cache friendly loop ordering | ||||
|   accelerator_for(sf,fine->oSites(),1,{ | ||||
| @@ -374,7 +587,7 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
|     Lexicographic::IndexFromCoor(coor_c,sc,coarse->_rdimensions); | ||||
|  | ||||
|     for(int i=0;i<nbasis;i++) { | ||||
|       auto basis_ = Basis[i].View(); | ||||
|       /*      auto basis_ = Basis[i],  );*/ | ||||
|       if(i==0) fineData_[sf]=coarseData_[sc](i) *basis_[sf]); | ||||
|       else     fineData_[sf]=fineData_[sf]+coarseData_[sc](i)*basis_[sf]); | ||||
|     } | ||||
| @@ -383,28 +596,49 @@ inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
|    | ||||
| } | ||||
| #else | ||||
| template<class vobj,class CComplex,int nbasis> | ||||
| template<class vobj,class CComplex,int nbasis,class VLattice> | ||||
| inline void blockPromote(const Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
| 			 Lattice<vobj>   &fineData, | ||||
| 			 const std::vector<Lattice<vobj> > &Basis) | ||||
| 			 const VLattice &Basis) | ||||
| { | ||||
|   GridBase * fine  = fineData.Grid(); | ||||
|   GridBase * coarse= coarseData.Grid(); | ||||
|  | ||||
|   fineData=Zero(); | ||||
|   for(int i=0;i<nbasis;i++) { | ||||
|     Lattice<iScalar<CComplex> > ip = PeekIndex<0>(coarseData,i); | ||||
|     Lattice<CComplex> cip(coarse); | ||||
|     auto cip_ = cip.View(); | ||||
|     auto  ip_ =  ip.View(); | ||||
|     accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{ | ||||
| 	coalescedWrite(cip_[sc], ip_(sc)()); | ||||
|     }); | ||||
|     blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData); | ||||
|  | ||||
|     //Lattice<CComplex> cip(coarse); | ||||
|     //autoView( cip_ , cip, AcceleratorWrite); | ||||
|     //autoView(  ip_ ,  ip, AcceleratorRead); | ||||
|     //accelerator_forNB(sc,coarse->oSites(),CComplex::Nsimd(),{ | ||||
|     //	coalescedWrite(cip_[sc], ip_(sc)()); | ||||
|     //  }); | ||||
|     //blockZAXPY<vobj,CComplex >(fineData,cip,Basis[i],fineData); | ||||
|     blockZAXPY(fineData,ip,Basis[i],fineData); | ||||
|   } | ||||
| } | ||||
| #endif | ||||
|  | ||||
| template<class vobj,class CComplex,int nbasis,class VLattice> | ||||
| inline void batchBlockPromote(const std::vector<Lattice<iVector<CComplex,nbasis>>> &coarseData, | ||||
|                                std::vector<Lattice<vobj>> &fineData, | ||||
|                                const VLattice &Basis) | ||||
| { | ||||
|   int NBatch = coarseData.size(); | ||||
|   assert(fineData.size() == NBatch); | ||||
|  | ||||
|   GridBase * fine   = fineData[0].Grid(); | ||||
|   GridBase * coarse = coarseData[0].Grid(); | ||||
|   for (int k=0; k<NBatch; k++) | ||||
|     fineData[k]=Zero(); | ||||
|   for (int i=0;i<nbasis;i++) { | ||||
|     for (int k=0; k<NBatch; k++) { | ||||
|       Lattice<iScalar<CComplex>> ip = PeekIndex<0>(coarseData[k],i); | ||||
|       blockZAXPY(fineData[k],ip,Basis[i],fineData[k]); | ||||
|     } | ||||
|   } | ||||
| } | ||||
|  | ||||
| // Useful for precision conversion, or indeed anything where an operator= does a conversion on scalars. | ||||
| // Simd layouts need not match since we use peek/poke Local | ||||
| template<class vobj,class vvobj> | ||||
| @@ -427,15 +661,17 @@ void localConvert(const Lattice<vobj> &in,Lattice<vvobj> &out) | ||||
|     assert(ig->lSites() == og->lSites()); | ||||
|   } | ||||
|  | ||||
|   autoView(in_v,in,CpuRead); | ||||
|   autoView(out_v,out,CpuWrite); | ||||
|   thread_for(idx, ig->lSites(),{ | ||||
|     sobj s; | ||||
|     ssobj ss; | ||||
|  | ||||
|     Coordinate lcoor(ni); | ||||
|     ig->LocalIndexToLocalCoor(idx,lcoor); | ||||
|     peekLocalSite(s,in,lcoor); | ||||
|     peekLocalSite(s,in_v,lcoor); | ||||
|     ss=s; | ||||
|     pokeLocalSite(ss,out,lcoor); | ||||
|     pokeLocalSite(ss,out_v,lcoor); | ||||
|   }); | ||||
| } | ||||
|  | ||||
| @@ -470,9 +706,10 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro | ||||
|   Coordinate rdt = Tg->_rdimensions; | ||||
|   Coordinate ist = Tg->_istride; | ||||
|   Coordinate ost = Tg->_ostride; | ||||
|   auto t_v = To.View(); | ||||
|   auto f_v = From.View(); | ||||
|   accelerator_for(idx,Fg->lSites(),1,{ | ||||
|  | ||||
|   autoView( t_v , To, CpuWrite); | ||||
|   autoView( f_v , From, CpuRead); | ||||
|   thread_for(idx,Fg->lSites(),{ | ||||
|     sobj s; | ||||
|     Coordinate Fcoor(nd); | ||||
|     Coordinate Tcoor(nd); | ||||
| @@ -485,17 +722,20 @@ void localCopyRegion(const Lattice<vobj> &From,Lattice<vobj> & To,Coordinate Fro | ||||
|       Tcoor[d] = ToLowerLeft[d]+ Fcoor[d]-FromLowerLeft[d]; | ||||
|     } | ||||
|     if (in_region) { | ||||
|       Integer idx_f = 0; for(int d=0;d<nd;d++) idx_f+=isf[d]*(Fcoor[d]/rdf[d]); | ||||
|       Integer idx_t = 0; for(int d=0;d<nd;d++) idx_t+=ist[d]*(Tcoor[d]/rdt[d]); | ||||
|       Integer odx_f = 0; for(int d=0;d<nd;d++) odx_f+=osf[d]*(Fcoor[d]%rdf[d]); | ||||
|       Integer odx_t = 0; for(int d=0;d<nd;d++) odx_t+=ost[d]*(Tcoor[d]%rdt[d]); | ||||
| #if 0       | ||||
|       Integer idx_f = 0; for(int d=0;d<nd;d++) idx_f+=isf[d]*(Fcoor[d]/rdf[d]); // inner index from | ||||
|       Integer idx_t = 0; for(int d=0;d<nd;d++) idx_t+=ist[d]*(Tcoor[d]/rdt[d]); // inner index to | ||||
|       Integer odx_f = 0; for(int d=0;d<nd;d++) odx_f+=osf[d]*(Fcoor[d]%rdf[d]); // outer index from | ||||
|       Integer odx_t = 0; for(int d=0;d<nd;d++) odx_t+=ost[d]*(Tcoor[d]%rdt[d]); // outer index to | ||||
|       scalar_type * fp = (scalar_type *)&f_v[odx_f]; | ||||
|       scalar_type * tp = (scalar_type *)&t_v[odx_t]; | ||||
|       for(int w=0;w<words;w++){ | ||||
| 	tp[idx_t+w*Nsimd] = fp[idx_f+w*Nsimd];  // FIXME IF RRII layout, type pun no worke | ||||
| 	tp[w].putlane(fp[w].getlane(idx_f),idx_t); | ||||
|       } | ||||
|       //      peekLocalSite(s,From,Fcoor); | ||||
|       //      pokeLocalSite(s,To  ,Tcoor); | ||||
| #else | ||||
|     peekLocalSite(s,f_v,Fcoor); | ||||
|     pokeLocalSite(s,t_v,Tcoor); | ||||
| #endif | ||||
|     } | ||||
|   }); | ||||
| } | ||||
| @@ -526,6 +766,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice | ||||
|   } | ||||
|  | ||||
|   // the above should guarantee that the operations are local | ||||
|   autoView(lowDimv,lowDim,CpuRead); | ||||
|   autoView(higherDimv,higherDim,CpuWrite); | ||||
|   thread_for(idx,lg->lSites(),{ | ||||
|     sobj s; | ||||
|     Coordinate lcoor(nl); | ||||
| @@ -538,8 +780,8 @@ void InsertSlice(const Lattice<vobj> &lowDim,Lattice<vobj> & higherDim,int slice | ||||
| 	hcoor[d]=lcoor[ddl++]; | ||||
|       } | ||||
|     } | ||||
|     peekLocalSite(s,lowDim,lcoor); | ||||
|     pokeLocalSite(s,higherDim,hcoor); | ||||
|     peekLocalSite(s,lowDimv,lcoor); | ||||
|     pokeLocalSite(s,higherDimv,hcoor); | ||||
|   }); | ||||
| } | ||||
|  | ||||
| @@ -567,6 +809,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic | ||||
|     } | ||||
|   } | ||||
|   // the above should guarantee that the operations are local | ||||
|   autoView(lowDimv,lowDim,CpuWrite); | ||||
|   autoView(higherDimv,higherDim,CpuRead); | ||||
|   thread_for(idx,lg->lSites(),{ | ||||
|     sobj s; | ||||
|     Coordinate lcoor(nl); | ||||
| @@ -579,8 +823,8 @@ void ExtractSlice(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int slic | ||||
| 	hcoor[d]=lcoor[ddl++]; | ||||
|       } | ||||
|     } | ||||
|     peekLocalSite(s,higherDim,hcoor); | ||||
|     pokeLocalSite(s,lowDim,lcoor); | ||||
|     peekLocalSite(s,higherDimv,hcoor); | ||||
|     pokeLocalSite(s,lowDimv,lcoor); | ||||
|   }); | ||||
|  | ||||
| } | ||||
| @@ -608,6 +852,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int | ||||
|   } | ||||
|  | ||||
|   // the above should guarantee that the operations are local | ||||
|   autoView(lowDimv,lowDim,CpuRead); | ||||
|   autoView(higherDimv,higherDim,CpuWrite); | ||||
|   thread_for(idx,lg->lSites(),{ | ||||
|     sobj s; | ||||
|     Coordinate lcoor(nl); | ||||
| @@ -616,8 +862,8 @@ void InsertSliceLocal(const Lattice<vobj> &lowDim, Lattice<vobj> & higherDim,int | ||||
|     if( lcoor[orthog] == slice_lo ) {  | ||||
|       hcoor=lcoor; | ||||
|       hcoor[orthog] = slice_hi; | ||||
|       peekLocalSite(s,lowDim,lcoor); | ||||
|       pokeLocalSite(s,higherDim,hcoor); | ||||
|       peekLocalSite(s,lowDimv,lcoor); | ||||
|       pokeLocalSite(s,higherDimv,hcoor); | ||||
|     } | ||||
|   }); | ||||
| } | ||||
| @@ -645,6 +891,8 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int | ||||
|   } | ||||
|  | ||||
|   // the above should guarantee that the operations are local | ||||
|   autoView(lowDimv,lowDim,CpuWrite); | ||||
|   autoView(higherDimv,higherDim,CpuRead); | ||||
|   thread_for(idx,lg->lSites(),{ | ||||
|     sobj s; | ||||
|     Coordinate lcoor(nl); | ||||
| @@ -653,15 +901,15 @@ void ExtractSliceLocal(Lattice<vobj> &lowDim,const Lattice<vobj> & higherDim,int | ||||
|     if( lcoor[orthog] == slice_lo ) {  | ||||
|       hcoor=lcoor; | ||||
|       hcoor[orthog] = slice_hi; | ||||
|       peekLocalSite(s,higherDim,hcoor); | ||||
|       pokeLocalSite(s,lowDim,lcoor); | ||||
|       peekLocalSite(s,higherDimv,hcoor); | ||||
|       pokeLocalSite(s,lowDimv,lcoor); | ||||
|     } | ||||
|   }); | ||||
| } | ||||
|  | ||||
|  | ||||
| template<class vobj> | ||||
| void Replicate(Lattice<vobj> &coarse,Lattice<vobj> & fine) | ||||
| void Replicate(const Lattice<vobj> &coarse,Lattice<vobj> & fine) | ||||
| { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|  | ||||
| @@ -718,7 +966,7 @@ unvectorizeToLexOrdArray(std::vector<sobj> &out, const Lattice<vobj> &in) | ||||
|   } | ||||
|  | ||||
|   //loop over outer index | ||||
|   auto in_v  = in.View(); | ||||
|   autoView( in_v  , in, CpuRead); | ||||
|   thread_for(in_oidx,in_grid->oSites(),{ | ||||
|     //Assemble vector of pointers to output elements | ||||
|     ExtractPointerArray<sobj> out_ptrs(in_nsimd); | ||||
| @@ -811,7 +1059,7 @@ vectorizeFromLexOrdArray( std::vector<sobj> &in, Lattice<vobj> &out) | ||||
|     icoor[lane].resize(ndim); | ||||
|     grid->iCoorFromIindex(icoor[lane],lane); | ||||
|   } | ||||
|   auto out_v = out.View(); | ||||
|   autoView( out_v , out, CpuWrite); | ||||
|   thread_for(oidx, grid->oSites(),{ | ||||
|     //Assemble vector of pointers to output elements | ||||
|     ExtractPointerArray<sobj> ptrs(nsimd); | ||||
| @@ -886,9 +1134,27 @@ vectorizeFromRevLexOrdArray( std::vector<sobj> &in, Lattice<vobj> &out) | ||||
|   }); | ||||
| } | ||||
|  | ||||
| //Convert a Lattice from one precision to another | ||||
| //Very fast precision change. Requires in/out objects to reside on same Grid (e.g. by using double2 for the double-precision field) | ||||
| template<class VobjOut, class VobjIn> | ||||
| void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
| void precisionChangeFast(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
| { | ||||
|   typedef typename VobjOut::vector_type Vout; | ||||
|   typedef typename VobjIn::vector_type Vin; | ||||
|   const int N = sizeof(VobjOut)/sizeof(Vout); | ||||
|   conformable(out.Grid(),in.Grid()); | ||||
|   out.Checkerboard() = in.Checkerboard(); | ||||
|   int nsimd = out.Grid()->Nsimd(); | ||||
|   autoView( out_v  , out, AcceleratorWrite); | ||||
|   autoView(  in_v ,   in, AcceleratorRead); | ||||
|   accelerator_for(idx,out.Grid()->oSites(),1,{ | ||||
|       Vout *vout = (Vout *)&out_v[idx]; | ||||
|       Vin  *vin  = (Vin  *)&in_v[idx]; | ||||
|       precisionChange(vout,vin,N); | ||||
|   }); | ||||
| } | ||||
| //Convert a Lattice from one precision to another (original, slow implementation) | ||||
| template<class VobjOut, class VobjIn> | ||||
| void precisionChangeOrig(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
| { | ||||
|   assert(out.Grid()->Nd() == in.Grid()->Nd()); | ||||
|   for(int d=0;d<out.Grid()->Nd();d++){ | ||||
| @@ -903,7 +1169,7 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
|  | ||||
|   int ndim = out.Grid()->Nd(); | ||||
|   int out_nsimd = out_grid->Nsimd(); | ||||
|      | ||||
|   int in_nsimd = in_grid->Nsimd(); | ||||
|   std::vector<Coordinate > out_icoor(out_nsimd); | ||||
|        | ||||
|   for(int lane=0; lane < out_nsimd; lane++){ | ||||
| @@ -914,7 +1180,7 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
|   std::vector<SobjOut> in_slex_conv(in_grid->lSites()); | ||||
|   unvectorizeToLexOrdArray(in_slex_conv, in); | ||||
|      | ||||
|   auto out_v = out.View(); | ||||
|   autoView( out_v , out, CpuWrite); | ||||
|   thread_for(out_oidx,out_grid->oSites(),{ | ||||
|     Coordinate out_ocoor(ndim); | ||||
|     out_grid->oCoorFromOindex(out_ocoor, out_oidx); | ||||
| @@ -934,6 +1200,128 @@ void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in) | ||||
|   }); | ||||
| } | ||||
|  | ||||
| //The workspace for a precision change operation allowing for the reuse of the mapping to save time on subsequent calls | ||||
| class precisionChangeWorkspace{ | ||||
|   std::pair<Integer,Integer>* fmap_device; //device pointer | ||||
|   //maintain grids for checking | ||||
|   GridBase* _out_grid; | ||||
|   GridBase* _in_grid; | ||||
| public: | ||||
|   precisionChangeWorkspace(GridBase *out_grid, GridBase *in_grid): _out_grid(out_grid), _in_grid(in_grid){ | ||||
|     //Build a map between the sites and lanes of the output field and the input field as we cannot use the Grids on the device | ||||
|     assert(out_grid->Nd() == in_grid->Nd()); | ||||
|     for(int d=0;d<out_grid->Nd();d++){ | ||||
|       assert(out_grid->FullDimensions()[d] == in_grid->FullDimensions()[d]); | ||||
|     } | ||||
|     int Nsimd_out = out_grid->Nsimd(); | ||||
|  | ||||
|     std::vector<Coordinate> out_icorrs(out_grid->Nsimd()); //reuse these | ||||
|     for(int lane=0; lane < out_grid->Nsimd(); lane++) | ||||
|       out_grid->iCoorFromIindex(out_icorrs[lane], lane); | ||||
|    | ||||
|     std::vector<std::pair<Integer,Integer> > fmap_host(out_grid->lSites()); //lsites = osites*Nsimd | ||||
|     thread_for(out_oidx,out_grid->oSites(),{ | ||||
| 	Coordinate out_ocorr;  | ||||
| 	out_grid->oCoorFromOindex(out_ocorr, out_oidx); | ||||
|        | ||||
| 	Coordinate lcorr; //the local coordinate (common to both in and out as full coordinate) | ||||
| 	for(int out_lane=0; out_lane < Nsimd_out; out_lane++){ | ||||
| 	  out_grid->InOutCoorToLocalCoor(out_ocorr, out_icorrs[out_lane], lcorr); | ||||
| 	 | ||||
| 	  //int in_oidx = in_grid->oIndex(lcorr), in_lane = in_grid->iIndex(lcorr); | ||||
| 	  //Note oIndex and OcorrFromOindex (and same for iIndex) are not inverse for checkerboarded lattice, the former coordinates being defined on the full lattice and the latter on the reduced lattice | ||||
| 	  //Until this is fixed we need to circumvent the problem locally. Here I will use the coordinates defined on the reduced lattice for simplicity | ||||
| 	  int in_oidx = 0, in_lane = 0; | ||||
| 	  for(int d=0;d<in_grid->_ndimension;d++){ | ||||
| 	    in_oidx += in_grid->_ostride[d] * ( lcorr[d] % in_grid->_rdimensions[d] ); | ||||
| 	    in_lane += in_grid->_istride[d] * ( lcorr[d] / in_grid->_rdimensions[d] ); | ||||
| 	  } | ||||
| 	  fmap_host[out_lane + Nsimd_out*out_oidx] = std::pair<Integer,Integer>( in_oidx, in_lane ); | ||||
| 	} | ||||
|       }); | ||||
|  | ||||
|     //Copy the map to the device (if we had a way to tell if an accelerator is in use we could avoid this copy for CPU-only machines) | ||||
|     size_t fmap_bytes = out_grid->lSites() * sizeof(std::pair<Integer,Integer>); | ||||
|     fmap_device = (std::pair<Integer,Integer>*)acceleratorAllocDevice(fmap_bytes); | ||||
|     acceleratorCopyToDevice(fmap_host.data(), fmap_device, fmap_bytes);  | ||||
|   } | ||||
|  | ||||
|   //Prevent moving or copying | ||||
|   precisionChangeWorkspace(const precisionChangeWorkspace &r) = delete; | ||||
|   precisionChangeWorkspace(precisionChangeWorkspace &&r) = delete; | ||||
|   precisionChangeWorkspace &operator=(const precisionChangeWorkspace &r) = delete; | ||||
|   precisionChangeWorkspace &operator=(precisionChangeWorkspace &&r) = delete; | ||||
|    | ||||
|   std::pair<Integer,Integer> const* getMap() const{ return fmap_device; } | ||||
|  | ||||
|   void checkGrids(GridBase* out, GridBase* in) const{ | ||||
|     conformable(out, _out_grid); | ||||
|     conformable(in, _in_grid); | ||||
|   } | ||||
|    | ||||
|   ~precisionChangeWorkspace(){ | ||||
|     acceleratorFreeDevice(fmap_device); | ||||
|   } | ||||
| }; | ||||
|  | ||||
|  | ||||
| //We would like to use precisionChangeFast when possible. However usage of this requires the Grids to be the same (runtime check) | ||||
| //*and* the precisionChange(VobjOut::vector_type, VobjIn, int) function to be defined for the types; this requires an extra compile-time check which we do using some SFINAE trickery | ||||
| template<class VobjOut, class VobjIn> | ||||
| auto _precisionChangeFastWrap(Lattice<VobjOut> &out, const Lattice<VobjIn> &in, int dummy)->decltype( precisionChange( ((typename VobjOut::vector_type*)0), ((typename VobjIn::vector_type*)0), 1), int()){ | ||||
|   if(out.Grid() == in.Grid()){ | ||||
|     precisionChangeFast(out,in); | ||||
|     return 1; | ||||
|   }else{ | ||||
|     return 0; | ||||
|   } | ||||
| } | ||||
| template<class VobjOut, class VobjIn> | ||||
| int _precisionChangeFastWrap(Lattice<VobjOut> &out, const Lattice<VobjIn> &in, long dummy){ //note long here is intentional; it means the above is preferred if available | ||||
|   return 0; | ||||
| } | ||||
|  | ||||
|  | ||||
| //Convert a lattice of one precision to another. Much faster than original implementation but requires a pregenerated workspace | ||||
| //which contains the mapping data. | ||||
| template<class VobjOut, class VobjIn> | ||||
| void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in, const precisionChangeWorkspace &workspace){ | ||||
|   if(_precisionChangeFastWrap(out,in,0)) return; | ||||
|    | ||||
|   static_assert( std::is_same<typename VobjOut::scalar_typeD, typename VobjIn::scalar_typeD>::value == 1, "precisionChange: tensor types must be the same" ); //if tensor types are same the DoublePrecision type must be the same | ||||
|  | ||||
|   out.Checkerboard() = in.Checkerboard(); | ||||
|   constexpr int Nsimd_out = VobjOut::Nsimd(); | ||||
|  | ||||
|   workspace.checkGrids(out.Grid(),in.Grid()); | ||||
|   std::pair<Integer,Integer> const* fmap_device = workspace.getMap(); | ||||
|  | ||||
|   //Do the copy/precision change | ||||
|   autoView( out_v , out, AcceleratorWrite); | ||||
|   autoView( in_v , in, AcceleratorRead); | ||||
|  | ||||
|   accelerator_for(out_oidx, out.Grid()->oSites(), 1,{ | ||||
|       std::pair<Integer,Integer> const* fmap_osite = fmap_device + out_oidx*Nsimd_out; | ||||
|       for(int out_lane=0; out_lane < Nsimd_out; out_lane++){       | ||||
| 	int in_oidx = fmap_osite[out_lane].first; | ||||
| 	int in_lane = fmap_osite[out_lane].second; | ||||
| 	copyLane(out_v[out_oidx], out_lane, in_v[in_oidx], in_lane); | ||||
|       } | ||||
|     }); | ||||
| } | ||||
|  | ||||
| //Convert a Lattice from one precision to another. Much faster than original implementation but slower than precisionChangeFast | ||||
| //or precisionChange called with pregenerated workspace, as it needs to internally generate the workspace on the host and copy to device | ||||
| template<class VobjOut, class VobjIn> | ||||
| void precisionChange(Lattice<VobjOut> &out, const Lattice<VobjIn> &in){ | ||||
|   if(_precisionChangeFastWrap(out,in,0)) return;    | ||||
|   precisionChangeWorkspace workspace(out.Grid(), in.Grid()); | ||||
|   precisionChange(out, in, workspace); | ||||
| } | ||||
|  | ||||
|  | ||||
|  | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Communicate between grids | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
|   | ||||
| @@ -38,16 +38,18 @@ NAMESPACE_BEGIN(Grid); | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Transpose | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| /* | ||||
| template<class vobj> | ||||
| inline Lattice<vobj> transpose(const Lattice<vobj> &lhs){ | ||||
|   Lattice<vobj> ret(lhs.Grid()); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ | ||||
|     coalescedWrite(ret_v[ss], transpose(lhs_v(ss))); | ||||
|   }); | ||||
|   return ret; | ||||
| }; | ||||
| */     | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Index level dependent transpose | ||||
| @@ -56,8 +58,8 @@ template<int Index,class vobj> | ||||
| inline auto TransposeIndex(const Lattice<vobj> &lhs) -> Lattice<decltype(transposeIndex<Index>(vobj()))> | ||||
| { | ||||
|   Lattice<decltype(transposeIndex<Index>(vobj()))> ret(lhs.Grid()); | ||||
|   auto ret_v = ret.View(); | ||||
|   auto lhs_v = lhs.View(); | ||||
|   autoView( ret_v, ret, AcceleratorWrite); | ||||
|   autoView( lhs_v, lhs, AcceleratorRead); | ||||
|   accelerator_for(ss,lhs_v.size(),vobj::Nsimd(),{ | ||||
|     coalescedWrite(ret_v[ss] , transposeIndex<Index>(lhs_v(ss))); | ||||
|   }); | ||||
|   | ||||
| @@ -35,8 +35,8 @@ NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){ | ||||
|   Lattice<obj> ret_i(rhs_i.Grid()); | ||||
|   auto rhs = rhs_i.View(); | ||||
|   auto ret = ret_i.View(); | ||||
|   autoView( rhs, rhs_i, AcceleratorRead); | ||||
|   autoView( ret, ret_i, AcceleratorWrite); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   accelerator_for(ss,rhs.size(),1,{ | ||||
|       ret[ss]=pow(rhs[ss],y); | ||||
| @@ -45,8 +45,8 @@ template<class obj> Lattice<obj> pow(const Lattice<obj> &rhs_i,RealD y){ | ||||
| } | ||||
| template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){ | ||||
|   Lattice<obj> ret_i(rhs_i.Grid()); | ||||
|   auto rhs = rhs_i.View(); | ||||
|   auto ret = ret_i.View(); | ||||
|   autoView( rhs , rhs_i, AcceleratorRead); | ||||
|   autoView( ret , ret_i, AcceleratorWrite); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||
|     coalescedWrite(ret[ss],mod(rhs(ss),y)); | ||||
| @@ -56,8 +56,8 @@ template<class obj> Lattice<obj> mod(const Lattice<obj> &rhs_i,Integer y){ | ||||
|  | ||||
| template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){ | ||||
|   Lattice<obj> ret_i(rhs_i.Grid()); | ||||
|   auto ret = ret_i.View(); | ||||
|   auto rhs = rhs_i.View(); | ||||
|   autoView( ret , ret_i, AcceleratorWrite); | ||||
|   autoView( rhs , rhs_i, AcceleratorRead); | ||||
|   ret.Checkerboard() = rhs_i.Checkerboard(); | ||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||
|     coalescedWrite(ret[ss],div(rhs(ss),y)); | ||||
| @@ -67,8 +67,8 @@ template<class obj> Lattice<obj> div(const Lattice<obj> &rhs_i,Integer y){ | ||||
|  | ||||
| template<class obj> Lattice<obj> expMat(const Lattice<obj> &rhs_i, RealD alpha, Integer Nexp = DEFAULT_MAT_EXP){ | ||||
|   Lattice<obj> ret_i(rhs_i.Grid()); | ||||
|   auto rhs = rhs_i.View(); | ||||
|   auto ret = ret_i.View(); | ||||
|   autoView( rhs , rhs_i, AcceleratorRead); | ||||
|   autoView( ret , ret_i, AcceleratorWrite); | ||||
|   ret.Checkerboard() = rhs.Checkerboard(); | ||||
|   accelerator_for(ss,rhs.size(),obj::Nsimd(),{ | ||||
|     coalescedWrite(ret[ss],Exponentiate(rhs(ss),alpha, Nexp)); | ||||
|   | ||||
							
								
								
									
										173
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										173
									
								
								Grid/lattice/Lattice_view.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,173 @@ | ||||
| #pragma once | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| // Base class which can be used by traits to pick up behaviour | ||||
| /////////////////////////////////////////////////////////////////// | ||||
| class LatticeBase {}; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Conformable checks; same instance of Grid required | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| void accelerator_inline conformable(GridBase *lhs,GridBase *rhs) | ||||
| { | ||||
|   assert(lhs == rhs); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Minimal base class containing only data valid to access from accelerator | ||||
| // _odata will be a managed pointer in CUDA | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Force access to lattice through a view object. | ||||
| // prevents writing of code that will not offload to GPU, but perhaps annoyingly | ||||
| // strict since host could could in principle direct access through the lattice object | ||||
| // Need to decide programming model. | ||||
| #define LATTICE_VIEW_STRICT | ||||
| template<class vobj> class LatticeAccelerator : public LatticeBase | ||||
| { | ||||
| protected: | ||||
|   //public: | ||||
|   GridBase *_grid; | ||||
|   int checkerboard; | ||||
|   vobj     *_odata;    // A managed pointer | ||||
|   uint64_t _odata_size;     | ||||
|   ViewAdvise advise; | ||||
| public: | ||||
|   accelerator_inline LatticeAccelerator() : checkerboard(0), _odata(nullptr), _odata_size(0), _grid(nullptr), advise(AdviseDefault) { };  | ||||
|   accelerator_inline uint64_t oSites(void) const { return _odata_size; }; | ||||
|   accelerator_inline int  Checkerboard(void) const { return checkerboard; }; | ||||
|   accelerator_inline int &Checkerboard(void) { return this->checkerboard; }; // can assign checkerboard on a container, not a view | ||||
|   accelerator_inline ViewAdvise Advise(void) const { return advise; }; | ||||
|   accelerator_inline ViewAdvise &Advise(void) { return this->advise; }; // can assign advise on a container, not a view | ||||
|   accelerator_inline void Conformable(GridBase * &grid) const | ||||
|   {  | ||||
|     if (grid) conformable(grid, _grid); | ||||
|     else      grid = _grid; | ||||
|   }; | ||||
|   // Host only | ||||
|   GridBase * getGrid(void) const { return _grid; }; | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // A View class which provides accessor to the data. | ||||
| // This will be safe to call from accelerator_for and is trivially copy constructible | ||||
| // The copy constructor for this will need to be used by device lambda functions | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class vobj>  | ||||
| class LatticeView : public LatticeAccelerator<vobj> | ||||
| { | ||||
| public: | ||||
|   // Rvalue | ||||
|   ViewMode mode; | ||||
|   void * cpu_ptr; | ||||
| #ifdef GRID_SIMT | ||||
|   accelerator_inline const typename vobj::scalar_object operator()(size_t i) const {  | ||||
|     return coalescedRead(this->_odata[i]);  | ||||
|   } | ||||
| #else  | ||||
|   accelerator_inline const vobj & operator()(size_t i) const { return this->_odata[i]; } | ||||
| #endif | ||||
|  | ||||
| #if 1 | ||||
|   //  accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; | ||||
|   accelerator_inline vobj       & operator[](size_t i) const { return this->_odata[i]; }; | ||||
| #else | ||||
|   accelerator_inline const vobj & operator[](size_t i) const { return this->_odata[i]; }; | ||||
|   accelerator_inline vobj       & operator[](size_t i)       { return this->_odata[i]; }; | ||||
| #endif | ||||
|    | ||||
|   accelerator_inline uint64_t begin(void) const { return 0;}; | ||||
|   accelerator_inline uint64_t end(void)   const { return this->_odata_size; }; | ||||
|   accelerator_inline uint64_t size(void)  const { return this->_odata_size; }; | ||||
|  | ||||
|   LatticeView(const LatticeAccelerator<vobj> &refer_to_me) : LatticeAccelerator<vobj> (refer_to_me){} | ||||
|   LatticeView(const LatticeView<vobj> &refer_to_me) = default; // Trivially copyable | ||||
|   LatticeView(const LatticeAccelerator<vobj> &refer_to_me,ViewMode mode) : LatticeAccelerator<vobj> (refer_to_me) | ||||
|   { | ||||
|     this->ViewOpen(mode); | ||||
|   } | ||||
|  | ||||
|   // Host functions | ||||
|   void ViewOpen(ViewMode mode) | ||||
|   { // Translate the pointer, could save a copy. Could use a "Handle" and not save _odata originally in base | ||||
|     //    std::cout << "View Open"<<std::hex<<this->_odata<<std::dec <<std::endl; | ||||
|     this->cpu_ptr = (void *)this->_odata; | ||||
|     this->mode    = mode; | ||||
|     this->_odata  =(vobj *) | ||||
|       MemoryManager::ViewOpen(this->cpu_ptr, | ||||
| 				this->_odata_size*sizeof(vobj), | ||||
| 				mode, | ||||
| 				this->advise);     | ||||
|   } | ||||
|   void ViewClose(void) | ||||
|   { // Inform the manager | ||||
|     //    std::cout << "View Close"<<std::hex<<this->cpu_ptr<<std::dec <<std::endl; | ||||
|     MemoryManager::ViewClose(this->cpu_ptr,this->mode);     | ||||
|   } | ||||
|  | ||||
| }; | ||||
| // Little autoscope assister | ||||
| template<class View>  | ||||
| class ViewCloser | ||||
| { | ||||
|   View v;  // Take a copy of view and call view close when I go out of scope automatically | ||||
|  public: | ||||
|   ViewCloser(View &_v) : v(_v) {}; | ||||
|   ~ViewCloser() { v.ViewClose(); } | ||||
| }; | ||||
|  | ||||
| #define autoView(l_v,l,mode)				\ | ||||
| 	  auto l_v = l.View(mode);			\ | ||||
| 	  ViewCloser<decltype(l_v)> _autoView##l_v(l_v); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Lattice expression types used by ET to assemble the AST | ||||
| //  | ||||
| // Need to be able to detect code paths according to the whether a lattice object or not | ||||
| // so introduce some trait type things | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| class LatticeExpressionBase {}; | ||||
|  | ||||
| template <typename T> using is_lattice = std::is_base_of<LatticeBase, T>; | ||||
| template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >; | ||||
|  | ||||
| template<class T, bool isLattice> struct ViewMapBase { typedef T Type; }; | ||||
| template<class T>                 struct ViewMapBase<T,true> { typedef LatticeView<typename T::vector_object> Type; }; | ||||
| template<class T> using ViewMap = ViewMapBase<T,std::is_base_of<LatticeBase, T>::value >; | ||||
|  | ||||
| template <typename Op, typename _T1>                            | ||||
| class LatticeUnaryExpression : public  LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   LatticeUnaryExpression(Op _op,const _T1 &_arg1) : op(_op), arg1(_arg1) {}; | ||||
| }; | ||||
|  | ||||
| template <typename Op, typename _T1, typename _T2>               | ||||
| class LatticeBinaryExpression : public LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   typedef typename ViewMap<_T2>::Type T2; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   T2 arg2; | ||||
|   LatticeBinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2) : op(_op), arg1(_arg1), arg2(_arg2) {}; | ||||
| }; | ||||
|  | ||||
| template <typename Op, typename _T1, typename _T2, typename _T3>  | ||||
| class LatticeTrinaryExpression : public LatticeExpressionBase  | ||||
| { | ||||
| public: | ||||
|   typedef typename ViewMap<_T1>::Type T1; | ||||
|   typedef typename ViewMap<_T2>::Type T2; | ||||
|   typedef typename ViewMap<_T3>::Type T3; | ||||
|   Op op; | ||||
|   T1 arg1; | ||||
|   T2 arg2; | ||||
|   T3 arg3; | ||||
|   LatticeTrinaryExpression(Op _op,const _T1 &_arg1,const _T2 &_arg2,const _T3 &_arg3) : op(_op), arg1(_arg1), arg2(_arg2), arg3(_arg3) {}; | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -43,7 +43,7 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice< | ||||
|   conformable(iftrue,predicate); | ||||
|   conformable(iftrue,ret); | ||||
|  | ||||
|   GridBase *grid=iftrue._grid; | ||||
|   GridBase *grid=iftrue.Grid(); | ||||
|  | ||||
|   typedef typename vobj::scalar_object scalar_object; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
| @@ -52,22 +52,23 @@ inline void whereWolf(Lattice<vobj> &ret,const Lattice<iobj> &predicate,Lattice< | ||||
|  | ||||
|   const int Nsimd = grid->Nsimd(); | ||||
|  | ||||
|   std::vector<Integer> mask(Nsimd); | ||||
|   std::vector<scalar_object> truevals (Nsimd); | ||||
|   std::vector<scalar_object> falsevals(Nsimd); | ||||
|  | ||||
|   parallel_for(int ss=0;ss<iftrue._grid->oSites(); ss++){ | ||||
|  | ||||
|     extract(iftrue._odata[ss]   ,truevals); | ||||
|     extract(iffalse._odata[ss]  ,falsevals); | ||||
|     extract<vInteger,Integer>(TensorRemove(predicate._odata[ss]),mask); | ||||
|  | ||||
|     for(int s=0;s<Nsimd;s++){ | ||||
|       if (mask[s]) falsevals[s]=truevals[s]; | ||||
|     } | ||||
|  | ||||
|     merge(ret._odata[ss],falsevals); | ||||
|   autoView(iftrue_v,iftrue,CpuRead); | ||||
|   autoView(iffalse_v,iffalse,CpuRead); | ||||
|   autoView(predicate_v,predicate,CpuRead); | ||||
|   autoView(ret_v,ret,CpuWrite); | ||||
|   Integer NN= grid->oSites(); | ||||
|   thread_for(ss,NN,{ | ||||
|     Integer mask; | ||||
|     scalar_object trueval; | ||||
|     scalar_object falseval; | ||||
|     for(int l=0;l<Nsimd;l++){ | ||||
|       trueval =extractLane(l,iftrue_v[ss]); | ||||
|       falseval=extractLane(l,iffalse_v[ss]); | ||||
|       mask    =extractLane(l,predicate_v[ss]); | ||||
|       if (mask) falseval=trueval; | ||||
|       insertLane(l,ret_v[ss],falseval); | ||||
|     } | ||||
|   }); | ||||
| } | ||||
|  | ||||
| template<class vobj,class iobj> | ||||
| @@ -76,9 +77,9 @@ inline Lattice<vobj> whereWolf(const Lattice<iobj> &predicate,Lattice<vobj> &ift | ||||
|   conformable(iftrue,iffalse); | ||||
|   conformable(iftrue,predicate); | ||||
|  | ||||
|   Lattice<vobj> ret(iftrue._grid); | ||||
|   Lattice<vobj> ret(iftrue.Grid()); | ||||
|  | ||||
|   where(ret,predicate,iftrue,iffalse); | ||||
|   whereWolf(ret,predicate,iftrue,iffalse); | ||||
|  | ||||
|   return ret; | ||||
| } | ||||
|   | ||||
							
								
								
									
										136
									
								
								Grid/lattice/PaddedCell.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										136
									
								
								Grid/lattice/PaddedCell.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,136 @@ | ||||
| /************************************************************************************* | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/lattice/PaddedCell.h | ||||
|  | ||||
|     Copyright (C) 2019 | ||||
|  | ||||
| Author: Peter Boyle pboyle@bnl.gov | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| class PaddedCell { | ||||
| public: | ||||
|   GridCartesian * unpadded_grid; | ||||
|   int dims; | ||||
|   int depth; | ||||
|   std::vector<GridCartesian *> grids; | ||||
|   ~PaddedCell() | ||||
|   { | ||||
|     DeleteGrids(); | ||||
|   } | ||||
|   PaddedCell(int _depth,GridCartesian *_grid) | ||||
|   { | ||||
|     unpadded_grid = _grid; | ||||
|     depth=_depth; | ||||
|     dims=_grid->Nd(); | ||||
|     AllocateGrids(); | ||||
|     Coordinate local     =unpadded_grid->LocalDimensions(); | ||||
|     for(int d=0;d<dims;d++){ | ||||
|       assert(local[d]>=depth); | ||||
|     } | ||||
|   } | ||||
|   void DeleteGrids(void) | ||||
|   { | ||||
|     for(int d=0;d<grids.size();d++){ | ||||
|       delete grids[d]; | ||||
|     } | ||||
|     grids.resize(0); | ||||
|   }; | ||||
|   void AllocateGrids(void) | ||||
|   { | ||||
|     Coordinate local     =unpadded_grid->LocalDimensions(); | ||||
|     Coordinate simd      =unpadded_grid->_simd_layout; | ||||
|     Coordinate processors=unpadded_grid->_processors; | ||||
|     Coordinate plocal    =unpadded_grid->LocalDimensions(); | ||||
|     Coordinate global(dims); | ||||
|  | ||||
|     // expand up one dim at a time | ||||
|     for(int d=0;d<dims;d++){ | ||||
|  | ||||
|       plocal[d] += 2*depth;  | ||||
|  | ||||
|       for(int d=0;d<dims;d++){ | ||||
| 	global[d] = plocal[d]*processors[d]; | ||||
|       } | ||||
|  | ||||
|       grids.push_back(new GridCartesian(global,simd,processors)); | ||||
|     } | ||||
|   }; | ||||
|   template<class vobj> | ||||
|   inline Lattice<vobj> Extract(Lattice<vobj> &in) | ||||
|   { | ||||
|     Lattice<vobj> out(unpadded_grid); | ||||
|  | ||||
|     Coordinate local     =unpadded_grid->LocalDimensions(); | ||||
|     Coordinate fll(dims,depth); // depends on the MPI spread | ||||
|     Coordinate tll(dims,0); // depends on the MPI spread | ||||
|     localCopyRegion(in,out,fll,tll,local); | ||||
|     return out; | ||||
|   } | ||||
|   template<class vobj> | ||||
|   inline Lattice<vobj> Exchange(Lattice<vobj> &in) | ||||
|   { | ||||
|     GridBase *old_grid = in.Grid(); | ||||
|     int dims = old_grid->Nd(); | ||||
|     Lattice<vobj> tmp = in; | ||||
|     for(int d=0;d<dims;d++){ | ||||
|       tmp = Expand(d,tmp); // rvalue && assignment | ||||
|     } | ||||
|     return tmp; | ||||
|   } | ||||
|   // expand up one dim at a time | ||||
|   template<class vobj> | ||||
|   inline Lattice<vobj> Expand(int dim,Lattice<vobj> &in) | ||||
|   { | ||||
|     GridBase *old_grid = in.Grid(); | ||||
|     GridCartesian *new_grid = grids[dim];//These are new grids | ||||
|     Lattice<vobj>  padded(new_grid); | ||||
|     Lattice<vobj> shifted(old_grid);     | ||||
|     Coordinate local     =old_grid->LocalDimensions(); | ||||
|     Coordinate plocal    =new_grid->LocalDimensions(); | ||||
|     if(dim==0) conformable(old_grid,unpadded_grid); | ||||
|     else       conformable(old_grid,grids[dim-1]); | ||||
|  | ||||
|     std::cout << " dim "<<dim<<" local "<<local << " padding to "<<plocal<<std::endl; | ||||
|     // Middle bit | ||||
|     for(int x=0;x<local[dim];x++){ | ||||
|       InsertSliceLocal(in,padded,x,depth+x,dim); | ||||
|     } | ||||
|     // High bit | ||||
|     shifted = Cshift(in,dim,depth); | ||||
|     for(int x=0;x<depth;x++){ | ||||
|       InsertSliceLocal(shifted,padded,local[dim]-depth+x,depth+local[dim]+x,dim); | ||||
|     } | ||||
|     // Low bit | ||||
|     shifted = Cshift(in,dim,-depth); | ||||
|     for(int x=0;x<depth;x++){ | ||||
|       InsertSliceLocal(shifted,padded,x,x,dim); | ||||
|     } | ||||
|     return padded; | ||||
|   } | ||||
|  | ||||
| }; | ||||
|   | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| @@ -65,29 +65,40 @@ GridLogger GridLogSolver (1, "Solver", GridLogColours, "NORMAL"); | ||||
| GridLogger GridLogError  (1, "Error" , GridLogColours, "RED"); | ||||
| GridLogger GridLogWarning(1, "Warning", GridLogColours, "YELLOW"); | ||||
| GridLogger GridLogMessage(1, "Message", GridLogColours, "NORMAL"); | ||||
| GridLogger GridLogMemory (1, "Memory", GridLogColours, "NORMAL"); | ||||
| GridLogger GridLogTracing(1, "Tracing", GridLogColours, "NORMAL"); | ||||
| GridLogger GridLogDebug  (1, "Debug", GridLogColours, "PURPLE"); | ||||
| GridLogger GridLogPerformance(1, "Performance", GridLogColours, "GREEN"); | ||||
| GridLogger GridLogDslash     (1, "Dslash", GridLogColours, "BLUE"); | ||||
| GridLogger GridLogIterative  (1, "Iterative", GridLogColours, "BLUE"); | ||||
| GridLogger GridLogIntegrator (1, "Integrator", GridLogColours, "BLUE"); | ||||
| GridLogger GridLogHMC (1, "HMC", GridLogColours, "BLUE"); | ||||
|  | ||||
| void GridLogConfigure(std::vector<std::string> &logstreams) { | ||||
|   GridLogError.Active(0); | ||||
|   GridLogError.Active(1); | ||||
|   GridLogWarning.Active(0); | ||||
|   GridLogMessage.Active(1); // at least the messages should be always on | ||||
|   GridLogMemory.Active(0);  | ||||
|   GridLogTracing.Active(0);  | ||||
|   GridLogIterative.Active(0); | ||||
|   GridLogDebug.Active(0); | ||||
|   GridLogPerformance.Active(0); | ||||
|   GridLogDslash.Active(0); | ||||
|   GridLogIntegrator.Active(1); | ||||
|   GridLogColours.Active(0); | ||||
|   GridLogHMC.Active(1); | ||||
|  | ||||
|   for (int i = 0; i < logstreams.size(); i++) { | ||||
|     if (logstreams[i] == std::string("Error"))       GridLogError.Active(1); | ||||
|     if (logstreams[i] == std::string("Tracing"))     GridLogTracing.Active(1); | ||||
|     if (logstreams[i] == std::string("Memory"))      GridLogMemory.Active(1); | ||||
|     if (logstreams[i] == std::string("Warning"))     GridLogWarning.Active(1); | ||||
|     if (logstreams[i] == std::string("NoMessage"))   GridLogMessage.Active(0); | ||||
|     if (logstreams[i] == std::string("Iterative"))   GridLogIterative.Active(1); | ||||
|     if (logstreams[i] == std::string("Debug"))       GridLogDebug.Active(1); | ||||
|     if (logstreams[i] == std::string("Performance")) GridLogPerformance.Active(1); | ||||
|     if (logstreams[i] == std::string("Integrator"))  GridLogIntegrator.Active(1); | ||||
|     if (logstreams[i] == std::string("Dslash"))      GridLogDslash.Active(1); | ||||
|     if (logstreams[i] == std::string("NoIntegrator"))GridLogIntegrator.Active(0); | ||||
|     if (logstreams[i] == std::string("NoHMC"))       GridLogHMC.Active(0); | ||||
|     if (logstreams[i] == std::string("Colours"))     GridLogColours.Active(1); | ||||
|   } | ||||
| } | ||||
|   | ||||
| @@ -130,13 +130,16 @@ public: | ||||
|   friend std::ostream& operator<< (std::ostream& stream, Logger& log){ | ||||
|  | ||||
|     if ( log.active ) { | ||||
|       std::ios_base::fmtflags f(stream.flags()); | ||||
|  | ||||
|       stream << log.background()<<  std::left; | ||||
|       if (log.topWidth > 0) | ||||
|       { | ||||
|         stream << std::setw(log.topWidth); | ||||
|       } | ||||
|       stream << log.topName << log.background()<< " : "; | ||||
|       stream << log.colour() <<  std::left; | ||||
|       //      stream << log.colour() <<  std::left; | ||||
|       stream <<  std::left; | ||||
|       if (log.chanWidth > 0) | ||||
|       { | ||||
|         stream << std::setw(log.chanWidth); | ||||
| @@ -151,7 +154,9 @@ public: | ||||
| 	stream << log.evidence() | ||||
| 	       << now	       << log.background() << " : " ; | ||||
|       } | ||||
|       stream << log.colour(); | ||||
|       //      stream << log.colour(); | ||||
|       stream <<  std::right; | ||||
|       stream.flags(f); | ||||
|       return stream; | ||||
|     } else {  | ||||
|       return devnull; | ||||
| @@ -176,8 +181,12 @@ extern GridLogger GridLogWarning; | ||||
| extern GridLogger GridLogMessage; | ||||
| extern GridLogger GridLogDebug  ; | ||||
| extern GridLogger GridLogPerformance; | ||||
| extern GridLogger GridLogDslash; | ||||
| extern GridLogger GridLogIterative  ; | ||||
| extern GridLogger GridLogIntegrator  ; | ||||
| extern GridLogger GridLogHMC; | ||||
| extern GridLogger GridLogMemory; | ||||
| extern GridLogger GridLogTracing; | ||||
| extern Colours    GridLogColours; | ||||
|  | ||||
| std::string demangle(const char* name) ; | ||||
|   | ||||
| @@ -1,3 +1,4 @@ | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| int                    Grid::BinaryIO::latticeWriteMaxRetry = -1; | ||||
| Grid::BinaryIO::IoPerf Grid::BinaryIO::lastPerf; | ||||
|   | ||||
| @@ -79,6 +79,13 @@ inline void removeWhitespace(std::string &key) | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| class BinaryIO { | ||||
|  public: | ||||
|   struct IoPerf | ||||
|   { | ||||
|     uint64_t size{0},time{0}; | ||||
|     double   mbytesPerSecond{0.}; | ||||
|   }; | ||||
|  | ||||
|   static IoPerf lastPerf; | ||||
|   static int latticeWriteMaxRetry; | ||||
|  | ||||
|   ///////////////////////////////////////////////////////////////////////////// | ||||
| @@ -341,7 +348,7 @@ class BinaryIO { | ||||
|     int ieee32big = (format == std::string("IEEE32BIG")); | ||||
|     int ieee32    = (format == std::string("IEEE32")); | ||||
|     int ieee64big = (format == std::string("IEEE64BIG")); | ||||
|     int ieee64    = (format == std::string("IEEE64")); | ||||
|     int ieee64    = (format == std::string("IEEE64") || format == std::string("IEEE64LITTLE")); | ||||
|     assert(ieee64||ieee32|ieee64big||ieee32big); | ||||
|     assert((ieee64+ieee32+ieee64big+ieee32big)==1); | ||||
|     ////////////////////////////////////////////////////////////////////////////// | ||||
| @@ -502,12 +509,15 @@ class BinaryIO { | ||||
|       timer.Stop(); | ||||
|     } | ||||
|      | ||||
|     lastPerf.size            = sizeof(fobj)*iodata.size()*nrank; | ||||
|     lastPerf.time            = timer.useconds(); | ||||
|     lastPerf.mbytesPerSecond = lastPerf.size/1024./1024./(lastPerf.time/1.0e6); | ||||
|     std::cout<<GridLogMessage<<"IOobject: "; | ||||
|     if ( control & BINARYIO_READ) std::cout << " read  "; | ||||
|     else                          std::cout << " write "; | ||||
|     uint64_t bytes = sizeof(fobj)*iodata.size()*nrank; | ||||
|     std::cout<< bytes <<" bytes in "<<timer.Elapsed() <<" " | ||||
| 	     << (double)bytes/ (double)timer.useconds() <<" MB/s "<<std::endl; | ||||
|     std::cout<< lastPerf.size <<" bytes in "<< timer.Elapsed() <<" " | ||||
| 	     << lastPerf.mbytesPerSecond <<" MB/s "<<std::endl; | ||||
|  | ||||
|     std::cout<<GridLogMessage<<"IOobject: endian and checksum overhead "<<bstimer.Elapsed()  <<std::endl; | ||||
|  | ||||
| @@ -663,10 +673,15 @@ class BinaryIO { | ||||
| 	     nersc_csum,scidac_csuma,scidac_csumb); | ||||
|  | ||||
|     timer.Start(); | ||||
|     thread_for(lidx,lsites,{ | ||||
|     thread_for(lidx,lsites,{  // FIX ME, suboptimal implementation | ||||
|       std::vector<RngStateType> tmp(RngStateCount); | ||||
|       std::copy(iodata[lidx].begin(),iodata[lidx].end(),tmp.begin()); | ||||
|       parallel_rng.SetState(tmp,lidx); | ||||
|       Coordinate lcoor; | ||||
|       grid->LocalIndexToLocalCoor(lidx, lcoor); | ||||
|       int o_idx=grid->oIndex(lcoor); | ||||
|       int i_idx=grid->iIndex(lcoor); | ||||
|       int gidx=parallel_rng.generator_idx(o_idx,i_idx); | ||||
|       parallel_rng.SetState(tmp,gidx); | ||||
|       }); | ||||
|     timer.Stop(); | ||||
|  | ||||
| @@ -723,7 +738,12 @@ class BinaryIO { | ||||
|     std::vector<RNGstate> iodata(lsites); | ||||
|     thread_for(lidx,lsites,{ | ||||
|       std::vector<RngStateType> tmp(RngStateCount); | ||||
|       parallel_rng.GetState(tmp,lidx); | ||||
|       Coordinate lcoor; | ||||
|       grid->LocalIndexToLocalCoor(lidx, lcoor); | ||||
|       int o_idx=grid->oIndex(lcoor); | ||||
|       int i_idx=grid->iIndex(lcoor); | ||||
|       int gidx=parallel_rng.generator_idx(o_idx,i_idx); | ||||
|       parallel_rng.GetState(tmp,gidx); | ||||
|       std::copy(tmp.begin(),tmp.end(),iodata[lidx].begin()); | ||||
|     }); | ||||
|     timer.Stop(); | ||||
|   | ||||
| @@ -31,6 +31,7 @@ directory | ||||
| #include <fstream> | ||||
| #include <iomanip> | ||||
| #include <iostream> | ||||
| #include <string> | ||||
| #include <map> | ||||
|  | ||||
| #include <pwd.h> | ||||
| @@ -123,7 +124,7 @@ assert(GRID_FIELD_NORM_CALC(FieldNormMetaData_, n2ck) < 1.0e-5); | ||||
|  //////////////////////////////////////////////////////////// | ||||
|  // Helper to fill out metadata | ||||
|  //////////////////////////////////////////////////////////// | ||||
|  template<class vobj> void ScidacMetaData(Lattice<vobj> & field, | ||||
| template<class vobj> void ScidacMetaData(Lattice<vobj> & field, | ||||
| 					  FieldMetaData &header, | ||||
| 					  scidacRecord & _scidacRecord, | ||||
| 					  scidacFile   & _scidacFile)  | ||||
| @@ -576,6 +577,8 @@ class ScidacReader : public GridLimeReader { | ||||
|     std::string rec_name(ILDG_BINARY_DATA); | ||||
|     while ( limeReaderNextRecord(LimeR) == LIME_SUCCESS ) {  | ||||
|       if ( !strncmp(limeReaderType(LimeR), rec_name.c_str(),strlen(rec_name.c_str()) )  ) { | ||||
|   // in principle should do the line below, but that breaks backard compatibility with old data | ||||
|   // skipPastObjectRecord(std::string(GRID_FIELD_NORM)); | ||||
| 	skipPastObjectRecord(std::string(SCIDAC_CHECKSUM)); | ||||
| 	return; | ||||
|       } | ||||
| @@ -619,12 +622,12 @@ class IldgWriter : public ScidacWriter { | ||||
|   // Don't require scidac records EXCEPT checksum | ||||
|   // Use Grid MetaData object if present. | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   template <class vsimd> | ||||
|   void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu,int sequence,std::string LFN,std::string description)  | ||||
|   template <class stats = PeriodicGaugeStatistics> | ||||
|   void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu,int sequence,std::string LFN,std::string description)  | ||||
|   { | ||||
|     GridBase * grid = Umu.Grid(); | ||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; | ||||
|     typedef iLorentzColourMatrix<vsimd> vobj; | ||||
|     typedef Lattice<vLorentzColourMatrixD> GaugeField; | ||||
|     typedef vLorentzColourMatrixD vobj; | ||||
|     typedef typename vobj::scalar_object sobj; | ||||
|  | ||||
|     //////////////////////////////////////// | ||||
| @@ -636,6 +639,9 @@ class IldgWriter : public ScidacWriter { | ||||
|  | ||||
|     ScidacMetaData(Umu,header,_scidacRecord,_scidacFile); | ||||
|  | ||||
|     stats Stats; | ||||
|     Stats(Umu,header); | ||||
|      | ||||
|     std::string format = header.floating_point; | ||||
|     header.ensemble_id    = description; | ||||
|     header.ensemble_label = description; | ||||
| @@ -649,7 +655,8 @@ class IldgWriter : public ScidacWriter { | ||||
|     // Fill ILDG header data struct | ||||
|     ////////////////////////////////////////////////////// | ||||
|     ildgFormat ildgfmt ; | ||||
|     ildgfmt.field     = std::string("su3gauge"); | ||||
|     const std::string stNC = std::to_string( Nc ) ; | ||||
|     ildgfmt.field          = std::string("su"+stNC+"gauge"); | ||||
|  | ||||
|     if ( format == std::string("IEEE32BIG") ) {  | ||||
|       ildgfmt.precision = 32; | ||||
| @@ -705,10 +712,10 @@ class IldgReader : public GridLimeReader { | ||||
|   // Else use ILDG MetaData object if present. | ||||
|   // Else use SciDAC MetaData object if present. | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   template <class vsimd> | ||||
|   void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, FieldMetaData &FieldMetaData_) { | ||||
|   template <class stats = PeriodicGaugeStatistics> | ||||
|   void readConfiguration(Lattice<vLorentzColourMatrixD> &Umu, FieldMetaData &FieldMetaData_) { | ||||
|  | ||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; | ||||
|     typedef Lattice<vLorentzColourMatrixD > GaugeField; | ||||
|     typedef typename GaugeField::vector_object  vobj; | ||||
|     typedef typename vobj::scalar_object sobj; | ||||
|  | ||||
| @@ -866,7 +873,8 @@ class IldgReader : public GridLimeReader { | ||||
|     } else {  | ||||
|  | ||||
|       assert(found_ildgFormat); | ||||
|       assert ( ildgFormat_.field == std::string("su3gauge") ); | ||||
|       const std::string stNC = std::to_string( Nc ) ; | ||||
|       assert ( ildgFormat_.field == std::string("su"+stNC+"gauge") ); | ||||
|  | ||||
|       /////////////////////////////////////////////////////////////////////////////////////// | ||||
|       // Populate our Grid metadata as best we can | ||||
| @@ -874,7 +882,7 @@ class IldgReader : public GridLimeReader { | ||||
|  | ||||
|       std::ostringstream vers; vers << ildgFormat_.version; | ||||
|       FieldMetaData_.hdr_version = vers.str(); | ||||
|       FieldMetaData_.data_type = std::string("4D_SU3_GAUGE_3X3"); | ||||
|       FieldMetaData_.data_type = std::string("4D_SU"+stNC+"_GAUGE_"+stNC+"x"+stNC); | ||||
|  | ||||
|       FieldMetaData_.nd=4; | ||||
|       FieldMetaData_.dimension.resize(4); | ||||
| @@ -921,7 +929,8 @@ class IldgReader : public GridLimeReader { | ||||
|  | ||||
|     if ( found_FieldMetaData || found_usqcdInfo ) { | ||||
|       FieldMetaData checker; | ||||
|       GaugeStatistics(Umu,checker); | ||||
|       stats Stats; | ||||
|       Stats(Umu,checker); | ||||
|       assert(fabs(checker.plaquette  - FieldMetaData_.plaquette )<1.0e-5); | ||||
|       assert(fabs(checker.link_trace - FieldMetaData_.link_trace)<1.0e-5); | ||||
|       std::cout << GridLogMessage<<"Plaquette and link trace match " << std::endl; | ||||
|   | ||||
| @@ -6,8 +6,8 @@ | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
|  | ||||
|     Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     Author: Jamie Hudspith <renwick.james.hudspth@gmail.com> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -128,7 +128,7 @@ inline void MachineCharacteristics(FieldMetaData &header) | ||||
|   std::time_t t = std::time(nullptr); | ||||
|   std::tm tm_ = *std::localtime(&t); | ||||
|   std::ostringstream oss;  | ||||
|   //      oss << std::put_time(&tm_, "%c %Z"); | ||||
|   oss << std::put_time(&tm_, "%c %Z"); | ||||
|   header.creation_date = oss.str(); | ||||
|   header.archive_date  = header.creation_date; | ||||
|  | ||||
| @@ -176,29 +176,18 @@ template<class vobj> inline void PrepareMetaData(Lattice<vobj> & field, FieldMet | ||||
|   GridMetaData(grid,header);  | ||||
|   MachineCharacteristics(header); | ||||
| } | ||||
| inline void GaugeStatistics(Lattice<vLorentzColourMatrixF> & data,FieldMetaData &header) | ||||
| template<class Impl> | ||||
| class GaugeStatistics | ||||
| { | ||||
|   // How to convert data precision etc... | ||||
|   header.link_trace=WilsonLoops<PeriodicGimplF>::linkTrace(data); | ||||
|   header.plaquette =WilsonLoops<PeriodicGimplF>::avgPlaquette(data); | ||||
| } | ||||
| inline void GaugeStatistics(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header) | ||||
| { | ||||
|   // How to convert data precision etc... | ||||
|   header.link_trace=WilsonLoops<PeriodicGimplD>::linkTrace(data); | ||||
|   header.plaquette =WilsonLoops<PeriodicGimplD>::avgPlaquette(data); | ||||
| } | ||||
| template<> inline void PrepareMetaData<vLorentzColourMatrixF>(Lattice<vLorentzColourMatrixF> & field, FieldMetaData &header) | ||||
| { | ||||
|     | ||||
|   GridBase *grid = field.Grid(); | ||||
|   std::string format = getFormatString<vLorentzColourMatrixF>(); | ||||
|   header.floating_point = format; | ||||
|   header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac | ||||
|   GridMetaData(grid,header);  | ||||
|   GaugeStatistics(field,header); | ||||
|   MachineCharacteristics(header); | ||||
| } | ||||
| public: | ||||
|   void operator()(Lattice<vLorentzColourMatrixD> & data,FieldMetaData &header) | ||||
|   { | ||||
|     header.link_trace = WilsonLoops<Impl>::linkTrace(data); | ||||
|     header.plaquette  = WilsonLoops<Impl>::avgPlaquette(data); | ||||
|   } | ||||
| }; | ||||
| typedef GaugeStatistics<PeriodicGimplD> PeriodicGaugeStatistics; | ||||
| typedef GaugeStatistics<ConjugateGimplD> ConjugateGaugeStatistics; | ||||
| template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzColourMatrixD> & field, FieldMetaData &header) | ||||
| { | ||||
|   GridBase *grid = field.Grid(); | ||||
| @@ -206,7 +195,6 @@ template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzCo | ||||
|   header.floating_point = format; | ||||
|   header.checksum = 0x0; // Nersc checksum unused in ILDG, Scidac | ||||
|   GridMetaData(grid,header);  | ||||
|   GaugeStatistics(field,header); | ||||
|   MachineCharacteristics(header); | ||||
| } | ||||
|  | ||||
| @@ -215,20 +203,24 @@ template<> inline void PrepareMetaData<vLorentzColourMatrixD>(Lattice<vLorentzCo | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| inline void reconstruct3(LorentzColourMatrix & cm) | ||||
| { | ||||
|   const int x=0; | ||||
|   const int y=1; | ||||
|   const int z=2; | ||||
|   assert( Nc < 4 && Nc > 1 ) ; | ||||
|   for(int mu=0;mu<Nd;mu++){ | ||||
|     #if Nc == 2 | ||||
|       cm(mu)()(1,0) = -adj(cm(mu)()(0,y)) ; | ||||
|       cm(mu)()(1,1) =  adj(cm(mu)()(0,x)) ; | ||||
|     #else | ||||
|       const int x=0 , y=1 , z=2 ; // a little disinenuous labelling | ||||
|       cm(mu)()(2,x) = adj(cm(mu)()(0,y)*cm(mu)()(1,z)-cm(mu)()(0,z)*cm(mu)()(1,y)); //x= yz-zy | ||||
|       cm(mu)()(2,y) = adj(cm(mu)()(0,z)*cm(mu)()(1,x)-cm(mu)()(0,x)*cm(mu)()(1,z)); //y= zx-xz | ||||
|       cm(mu)()(2,z) = adj(cm(mu)()(0,x)*cm(mu)()(1,y)-cm(mu)()(0,y)*cm(mu)()(1,x)); //z= xy-yx | ||||
|     #endif | ||||
|   } | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Some data types for intermediate storage | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| template<typename vtype> using iLorentzColour2x3 = iVector<iVector<iVector<vtype, Nc>, 2>, Nd >; | ||||
| template<typename vtype> using iLorentzColour2x3 = iVector<iVector<iVector<vtype, Nc>, Nc-1>, Nd >; | ||||
|  | ||||
| typedef iLorentzColour2x3<Complex>  LorentzColour2x3; | ||||
| typedef iLorentzColour2x3<ComplexF> LorentzColour2x3F; | ||||
| @@ -290,7 +282,6 @@ struct GaugeSimpleMunger{ | ||||
|  | ||||
| template <class fobj, class sobj> | ||||
| struct GaugeSimpleUnmunger { | ||||
|  | ||||
|   void operator()(sobj &in, fobj &out) { | ||||
|     for (int mu = 0; mu < Nd; mu++) { | ||||
|       for (int i = 0; i < Nc; i++) { | ||||
| @@ -301,12 +292,36 @@ struct GaugeSimpleUnmunger { | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| template<class fobj,class sobj> | ||||
| struct GaugeDoubleStoredMunger{ | ||||
|   void operator()(fobj &in, sobj &out) { | ||||
|     for (int mu = 0; mu < Nds; mu++) { | ||||
|       for (int i = 0; i < Nc; i++) { | ||||
|         for (int j = 0; j < Nc; j++) { | ||||
|           out(mu)()(i, j) = in(mu)()(i, j); | ||||
|         }} | ||||
|     } | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| template <class fobj, class sobj> | ||||
| struct GaugeDoubleStoredUnmunger { | ||||
|   void operator()(sobj &in, fobj &out) { | ||||
|     for (int mu = 0; mu < Nds; mu++) { | ||||
|       for (int i = 0; i < Nc; i++) { | ||||
|         for (int j = 0; j < Nc; j++) { | ||||
|           out(mu)()(i, j) = in(mu)()(i, j); | ||||
|         }} | ||||
|     } | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| template<class fobj,class sobj> | ||||
| struct Gauge3x2munger{ | ||||
|   void operator() (fobj &in,sobj &out){ | ||||
|     for(int mu=0;mu<Nd;mu++){ | ||||
|       for(int i=0;i<2;i++){ | ||||
| 	for(int j=0;j<3;j++){ | ||||
|       for(int i=0;i<Nc-1;i++){ | ||||
| 	for(int j=0;j<Nc;j++){ | ||||
| 	  out(mu)()(i,j) = in(mu)(i)(j); | ||||
| 	}} | ||||
|     } | ||||
| @@ -318,8 +333,8 @@ template<class fobj,class sobj> | ||||
| struct Gauge3x2unmunger{ | ||||
|   void operator() (sobj &in,fobj &out){ | ||||
|     for(int mu=0;mu<Nd;mu++){ | ||||
|       for(int i=0;i<2;i++){ | ||||
| 	for(int j=0;j<3;j++){ | ||||
|       for(int i=0;i<Nc-1;i++){ | ||||
| 	for(int j=0;j<Nc;j++){ | ||||
| 	  out(mu)(i)(j) = in(mu)()(i,j); | ||||
| 	}} | ||||
|     } | ||||
|   | ||||
| @@ -9,6 +9,7 @@ | ||||
|     Author: Matt Spraggs <matthew.spraggs@gmail.com> | ||||
|     Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|     Author: Jamie Hudspith <renwick.james.hudspth@gmail.com> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -30,6 +31,8 @@ | ||||
| #ifndef GRID_NERSC_IO_H | ||||
| #define GRID_NERSC_IO_H | ||||
|  | ||||
| #include <string> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| using namespace Grid; | ||||
| @@ -39,6 +42,10 @@ using namespace Grid; | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| class NerscIO : public BinaryIO {  | ||||
| public: | ||||
|   typedef Lattice<vLorentzColourMatrixD> GaugeField; | ||||
|  | ||||
|   // Enable/disable exiting if the plaquette in the header does not match the value computed (default true) | ||||
|   static bool & exitOnReadPlaquetteMismatch(){ static bool v=true; return v; } | ||||
|  | ||||
|   static inline void truncate(std::string file){ | ||||
|     std::ofstream fout(file,std::ios::out); | ||||
| @@ -129,12 +136,12 @@ public: | ||||
|   // Now the meat: the object readers | ||||
|   ///////////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
|   template<class vsimd> | ||||
|   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, | ||||
|   template<class GaugeStats=PeriodicGaugeStatistics> | ||||
|   static inline void readConfiguration(GaugeField &Umu, | ||||
| 				       FieldMetaData& header, | ||||
| 				       std::string file) | ||||
| 				       std::string file, | ||||
| 				       GaugeStats GaugeStatisticsCalculator=GaugeStats()) | ||||
|   { | ||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; | ||||
|  | ||||
|     GridBase *grid = Umu.Grid(); | ||||
|     uint64_t offset = readHeader(file,Umu.Grid(),header); | ||||
| @@ -143,33 +150,35 @@ public: | ||||
|  | ||||
|     std::string format(header.floating_point); | ||||
|  | ||||
|     int ieee32big = (format == std::string("IEEE32BIG")); | ||||
|     int ieee32    = (format == std::string("IEEE32")); | ||||
|     int ieee64big = (format == std::string("IEEE64BIG")); | ||||
|     int ieee64    = (format == std::string("IEEE64")); | ||||
|     const int ieee32big = (format == std::string("IEEE32BIG")); | ||||
|     const int ieee32    = (format == std::string("IEEE32")); | ||||
|     const int ieee64big = (format == std::string("IEEE64BIG")); | ||||
|     const int ieee64    = (format == std::string("IEEE64") || \ | ||||
| 			   format == std::string("IEEE64LITTLE")); | ||||
|  | ||||
|     uint32_t nersc_csum,scidac_csuma,scidac_csumb; | ||||
|     // depending on datatype, set up munger; | ||||
|     // munger is a function of <floating point, Real, data_type> | ||||
|     if ( header.data_type == std::string("4D_SU3_GAUGE") ) { | ||||
|     const std::string stNC = std::to_string( Nc ) ; | ||||
|     if ( header.data_type == std::string("4D_SU"+stNC+"_GAUGE") ) { | ||||
|       if ( ieee32 || ieee32big ) { | ||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3F>  | ||||
| 	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3F>  | ||||
| 	  (Umu,file,Gauge3x2munger<LorentzColour2x3F,LorentzColourMatrix>(), offset,format, | ||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||
|       } | ||||
|       if ( ieee64 || ieee64big ) { | ||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>, LorentzColour2x3D>  | ||||
| 	BinaryIO::readLatticeObject<vLorentzColourMatrixD, LorentzColour2x3D>  | ||||
| 	  (Umu,file,Gauge3x2munger<LorentzColour2x3D,LorentzColourMatrix>(),offset,format, | ||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||
|       } | ||||
|     } else if ( header.data_type == std::string("4D_SU3_GAUGE_3x3") ) { | ||||
|     } else if ( header.data_type == std::string("4D_SU"+stNC+"_GAUGE_"+stNC+"x"+stNC) ) { | ||||
|       if ( ieee32 || ieee32big ) { | ||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixF> | ||||
| 	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixF> | ||||
| 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixF,LorentzColourMatrix>(),offset,format, | ||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||
|       } | ||||
|       if ( ieee64 || ieee64big ) { | ||||
| 	BinaryIO::readLatticeObject<iLorentzColourMatrix<vsimd>,LorentzColourMatrixD> | ||||
| 	BinaryIO::readLatticeObject<vLorentzColourMatrixD,LorentzColourMatrixD> | ||||
| 	  (Umu,file,GaugeSimpleMunger<LorentzColourMatrixD,LorentzColourMatrix>(),offset,format, | ||||
| 	   nersc_csum,scidac_csuma,scidac_csumb); | ||||
|       } | ||||
| @@ -177,7 +186,7 @@ public: | ||||
|       assert(0); | ||||
|     } | ||||
|  | ||||
|     GaugeStatistics(Umu,clone); | ||||
|     GaugeStats Stats; Stats(Umu,clone); | ||||
|  | ||||
|     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<<" checksum "<<std::hex<<nersc_csum<< std::dec | ||||
| 	     <<" header   "<<std::hex<<header.checksum<<std::dec <<std::endl; | ||||
| @@ -196,31 +205,40 @@ public: | ||||
|       std::cerr << " nersc_csum  " <<std::hex<< nersc_csum << " " << header.checksum<< std::dec<< std::endl; | ||||
|       exit(0); | ||||
|     } | ||||
|     assert(fabs(clone.plaquette -header.plaquette ) < 1.0e-5 ); | ||||
|     if(exitOnReadPlaquetteMismatch()) assert(fabs(clone.plaquette -header.plaquette ) < 1.0e-5 ); | ||||
|     assert(fabs(clone.link_trace-header.link_trace) < 1.0e-6 ); | ||||
|     assert(nersc_csum == header.checksum ); | ||||
|        | ||||
|     std::cout<<GridLogMessage <<"NERSC Configuration "<<file<< " and plaquette, link trace, and checksum agree"<<std::endl; | ||||
|   } | ||||
|  | ||||
|   template<class vsimd> | ||||
|   static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd> > &Umu, | ||||
|   // Preferred interface | ||||
|   template<class GaugeStats=PeriodicGaugeStatistics> | ||||
|   static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu, | ||||
| 					std::string file,  | ||||
| 					std::string ens_label = std::string("DWF"), | ||||
| 					std::string ens_id = std::string("UKQCD"), | ||||
| 					unsigned int sequence_number = 1) | ||||
|   { | ||||
|     writeConfiguration(Umu,file,0,1,ens_label,ens_id,sequence_number); | ||||
|   } | ||||
|   template<class GaugeStats=PeriodicGaugeStatistics> | ||||
|   static inline void writeConfiguration(Lattice<vLorentzColourMatrixD > &Umu, | ||||
| 					std::string file,  | ||||
| 					int two_row, | ||||
| 					int bits32) | ||||
| 					int bits32, | ||||
| 					std::string ens_label = std::string("DWF"), | ||||
| 					std::string ens_id = std::string("UKQCD"), | ||||
| 					unsigned int sequence_number = 1) | ||||
|   { | ||||
|     typedef Lattice<iLorentzColourMatrix<vsimd> > GaugeField; | ||||
|  | ||||
|     typedef iLorentzColourMatrix<vsimd> vobj; | ||||
|     typedef vLorentzColourMatrixD vobj; | ||||
|     typedef typename vobj::scalar_object sobj; | ||||
|  | ||||
|     FieldMetaData header; | ||||
|     /////////////////////////////////////////// | ||||
|     // Following should become arguments | ||||
|     /////////////////////////////////////////// | ||||
|     header.sequence_number = 1; | ||||
|     header.ensemble_id     = "UKQCD"; | ||||
|     header.ensemble_label  = "DWF"; | ||||
|     header.sequence_number = sequence_number; | ||||
|     header.ensemble_id     = ens_id; | ||||
|     header.ensemble_label  = ens_label; | ||||
|     header.hdr_version     = "1.0" ; | ||||
|  | ||||
|     typedef LorentzColourMatrixD fobj3D; | ||||
|     typedef LorentzColour2x3D    fobj2D; | ||||
| @@ -229,15 +247,19 @@ public: | ||||
|  | ||||
|     GridMetaData(grid,header); | ||||
|     assert(header.nd==4); | ||||
|     GaugeStatistics(Umu,header); | ||||
|     GaugeStats Stats; Stats(Umu,header); | ||||
|     MachineCharacteristics(header); | ||||
|  | ||||
|     uint64_t offset; | ||||
|  | ||||
|     // Sod it -- always write 3x3 double | ||||
|     // Sod it -- always write NcxNc double | ||||
|     header.floating_point  = std::string("IEEE64BIG"); | ||||
|     header.data_type      = std::string("4D_SU3_GAUGE_3x3"); | ||||
|     GaugeSimpleUnmunger<fobj3D,sobj> munge; | ||||
|     const std::string stNC = std::to_string( Nc ) ; | ||||
|     if( two_row ) { | ||||
|       header.data_type = std::string("4D_SU" + stNC + "_GAUGE" ); | ||||
|     } else { | ||||
|       header.data_type = std::string("4D_SU" + stNC + "_GAUGE_" + stNC + "x" + stNC ); | ||||
|     } | ||||
|     if ( grid->IsBoss() ) {  | ||||
|       truncate(file); | ||||
|       offset = writeHeader(header,file); | ||||
| @@ -245,8 +267,15 @@ public: | ||||
|     grid->Broadcast(0,(void *)&offset,sizeof(offset)); | ||||
|  | ||||
|     uint32_t nersc_csum,scidac_csuma,scidac_csumb; | ||||
|     if( two_row ) { | ||||
|       Gauge3x2unmunger<fobj2D,sobj> munge; | ||||
|       BinaryIO::writeLatticeObject<vobj,fobj2D>(Umu,file,munge,offset,header.floating_point, | ||||
| 						nersc_csum,scidac_csuma,scidac_csumb); | ||||
|     } else { | ||||
|       GaugeSimpleUnmunger<fobj3D,sobj> munge; | ||||
|       BinaryIO::writeLatticeObject<vobj,fobj3D>(Umu,file,munge,offset,header.floating_point, | ||||
| 						nersc_csum,scidac_csuma,scidac_csumb); | ||||
|     } | ||||
|     header.checksum = nersc_csum; | ||||
|     if ( grid->IsBoss() ) {  | ||||
|       writeHeader(header,file); | ||||
| @@ -279,7 +308,6 @@ public: | ||||
|     MachineCharacteristics(header); | ||||
|  | ||||
|     uint64_t offset; | ||||
|    | ||||
| #ifdef RNG_RANLUX | ||||
|     header.floating_point = std::string("UINT64"); | ||||
|     header.data_type      = std::string("RANLUX48"); | ||||
|   | ||||
							
								
								
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										224
									
								
								Grid/parallelIO/OpenQcdIO.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,224 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/parallelIO/OpenQcdIO.h | ||||
|  | ||||
| Copyright (C) 2015 - 2020 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| struct OpenQcdHeader : Serializable { | ||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(OpenQcdHeader, | ||||
|                                   int,    Nt, | ||||
|                                   int,    Nx, | ||||
|                                   int,    Ny, | ||||
|                                   int,    Nz, | ||||
|                                   double, plaq); | ||||
| }; | ||||
|  | ||||
| class OpenQcdIO : public BinaryIO { | ||||
| public: | ||||
|   static constexpr double normalisationFactor = Nc; // normalisation difference: grid 18, openqcd 6 | ||||
|  | ||||
|   static inline int readHeader(std::string file, GridBase* grid, FieldMetaData& field) { | ||||
|     OpenQcdHeader header; | ||||
|  | ||||
|     { | ||||
|       std::ifstream fin(file, std::ios::in | std::ios::binary); | ||||
|       fin.read(reinterpret_cast<char*>(&header), sizeof(OpenQcdHeader)); | ||||
|       assert(!fin.fail()); | ||||
|       field.data_start = fin.tellg(); | ||||
|       fin.close(); | ||||
|     } | ||||
|  | ||||
|     header.plaq /= normalisationFactor; | ||||
|  | ||||
|     // sanity check (should trigger on endian issues) | ||||
|     assert(0 < header.Nt && header.Nt <= 1024); | ||||
|     assert(0 < header.Nx && header.Nx <= 1024); | ||||
|     assert(0 < header.Ny && header.Ny <= 1024); | ||||
|     assert(0 < header.Nz && header.Nz <= 1024); | ||||
|  | ||||
|     field.dimension[0] = header.Nx; | ||||
|     field.dimension[1] = header.Ny; | ||||
|     field.dimension[2] = header.Nz; | ||||
|     field.dimension[3] = header.Nt; | ||||
|  | ||||
|     std::cout << GridLogDebug << "header: " << header << std::endl; | ||||
|     std::cout << GridLogDebug << "grid dimensions: " << grid->_fdimensions << std::endl; | ||||
|     std::cout << GridLogDebug << "file dimensions: " << field.dimension << std::endl; | ||||
|  | ||||
|     assert(grid->_ndimension == Nd); | ||||
|     for(int d = 0; d < Nd; d++) | ||||
|       assert(grid->_fdimensions[d] == field.dimension[d]); | ||||
|  | ||||
|     field.plaquette = header.plaq; | ||||
|  | ||||
|     return field.data_start; | ||||
|   } | ||||
|  | ||||
|   template<class vsimd> | ||||
|   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||
|                                        FieldMetaData&                        header, | ||||
|                                        std::string                           file) { | ||||
|     typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubleStoredGaugeField; | ||||
|  | ||||
|     assert(Ns == 4 and Nd == 4 and Nc == 3); | ||||
|  | ||||
|     auto grid = dynamic_cast<GridCartesian*>(Umu.Grid()); | ||||
|     assert(grid != nullptr); assert(grid->_ndimension == Nd); | ||||
|  | ||||
|     uint64_t offset = readHeader(file, Umu.Grid(), header); | ||||
|  | ||||
|     FieldMetaData clone(header); | ||||
|  | ||||
|     std::string format("IEEE64"); // they always store little endian double precsision | ||||
|     uint32_t    nersc_csum, scidac_csuma, scidac_csumb; | ||||
|  | ||||
|     GridCartesian*         grid_openqcd = createOpenQcdGrid(grid); | ||||
|     GridRedBlackCartesian* grid_rb      = SpaceTimeGrid::makeFourDimRedBlackGrid(grid); | ||||
|  | ||||
|     typedef DoubleStoredColourMatrixD                                              fobj; | ||||
|     typedef typename DoubleStoredGaugeField::vector_object::scalar_object          sobj; | ||||
|     typedef typename DoubleStoredGaugeField::vector_object::Realified::scalar_type word; | ||||
|  | ||||
|     word w = 0; | ||||
|  | ||||
|     std::vector<fobj> iodata(grid_openqcd->lSites()); // Munge, checksum, byte order in here | ||||
|     std::vector<sobj> scalardata(grid->lSites()); | ||||
|  | ||||
|     IOobject(w, grid_openqcd, iodata, file, offset, format, BINARYIO_READ | BINARYIO_LEXICOGRAPHIC, | ||||
|              nersc_csum, scidac_csuma, scidac_csumb); | ||||
|  | ||||
|     GridStopWatch timer; | ||||
|     timer.Start(); | ||||
|  | ||||
|     DoubleStoredGaugeField Umu_ds(grid); | ||||
|  | ||||
|     auto munge = GaugeDoubleStoredMunger<DoubleStoredColourMatrixD, DoubleStoredColourMatrix>(); | ||||
|  | ||||
|     Coordinate ldim = grid->LocalDimensions(); | ||||
|     thread_for(idx_g, grid->lSites(), { | ||||
|         Coordinate coor; | ||||
|         grid->LocalIndexToLocalCoor(idx_g, coor); | ||||
|  | ||||
|         bool isOdd = grid_rb->CheckerBoard(coor) == Odd; | ||||
|  | ||||
|         if(!isOdd) continue; | ||||
|  | ||||
|         int idx_o = (coor[Tdir] * ldim[Xdir] * ldim[Ydir] * ldim[Zdir] | ||||
|                   +  coor[Xdir] * ldim[Ydir] * ldim[Zdir] | ||||
|                   +  coor[Ydir] * ldim[Zdir] | ||||
|                   +  coor[Zdir])/2; | ||||
|  | ||||
|         munge(iodata[idx_o], scalardata[idx_g]); | ||||
|     }); | ||||
|  | ||||
|     grid->Barrier(); timer.Stop(); | ||||
|     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: munge overhead " << timer.Elapsed() << std::endl; | ||||
|  | ||||
|     timer.Reset(); timer.Start(); | ||||
|  | ||||
|     vectorizeFromLexOrdArray(scalardata, Umu_ds); | ||||
|  | ||||
|     grid->Barrier(); timer.Stop(); | ||||
|     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: vectorize overhead " << timer.Elapsed() << std::endl; | ||||
|  | ||||
|     timer.Reset(); timer.Start(); | ||||
|  | ||||
|     undoDoubleStore(Umu, Umu_ds); | ||||
|  | ||||
|     grid->Barrier(); timer.Stop(); | ||||
|     std::cout << Grid::GridLogMessage << "OpenQcdIO::readConfiguration: redistribute overhead " << timer.Elapsed() << std::endl; | ||||
|  | ||||
|     PeriodicGaugeStatistics Stats; Stats(Umu, clone); | ||||
|  | ||||
|     RealD plaq_diff = fabs(clone.plaquette - header.plaquette); | ||||
|  | ||||
|     // clang-format off | ||||
|     std::cout << GridLogMessage << "OpenQcd Configuration " << file | ||||
|               << " plaquette " << clone.plaquette | ||||
|               << " header " << header.plaquette | ||||
|               << " difference " << plaq_diff | ||||
|               << std::endl; | ||||
|     // clang-format on | ||||
|  | ||||
|     RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15; | ||||
|     RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code | ||||
|  | ||||
|     if(plaq_diff >= tol) | ||||
|       std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl; | ||||
|     assert(plaq_diff < tol); | ||||
|  | ||||
|     std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl; | ||||
|   } | ||||
|  | ||||
|   template<class vsimd> | ||||
|   static inline void writeConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||
|                                         std::string                           file) { | ||||
|     std::cout << GridLogError << "Writing to openQCD file format is not implemented" << std::endl; | ||||
|     exit(EXIT_FAILURE); | ||||
|   } | ||||
|  | ||||
| private: | ||||
|   static inline GridCartesian* createOpenQcdGrid(GridCartesian* grid) { | ||||
|     // exploit GridCartesian to be able to still use IOobject | ||||
|     Coordinate gdim  = grid->GlobalDimensions(); | ||||
|     Coordinate ldim  = grid->LocalDimensions(); | ||||
|     Coordinate pcoor = grid->ThisProcessorCoor(); | ||||
|  | ||||
|     // openqcd does rb on the z direction | ||||
|     gdim[Zdir] /= 2; | ||||
|     ldim[Zdir] /= 2; | ||||
|  | ||||
|     // and has the order T X Y Z (from slowest to fastest) | ||||
|     std::swap(gdim[Xdir], gdim[Zdir]); | ||||
|     std::swap(ldim[Xdir], ldim[Zdir]); | ||||
|     std::swap(pcoor[Xdir], pcoor[Zdir]); | ||||
|  | ||||
|     GridCartesian* ret   = SpaceTimeGrid::makeFourDimGrid(gdim, grid->_simd_layout, grid->ProcessorGrid()); | ||||
|     ret->_ldimensions    = ldim; | ||||
|     ret->_processor_coor = pcoor; | ||||
|     return ret; | ||||
|   } | ||||
|  | ||||
|   template<class vsimd> | ||||
|   static inline void undoDoubleStore(Lattice<iLorentzColourMatrix<vsimd>>&            Umu, | ||||
|                                      Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) { | ||||
|     conformable(Umu.Grid(), Umu_ds.Grid()); | ||||
|     Lattice<iColourMatrix<vsimd>> U(Umu.Grid()); | ||||
|  | ||||
|     // they store T+, T-, X+, X-, Y+, Y-, Z+, Z- | ||||
|     for(int mu_g = 0; mu_g < Nd; ++mu_g) { | ||||
|       int mu_o = (mu_g + 1) % Nd; | ||||
|       U        = PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o) | ||||
|                + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 2 * mu_o + 1), mu_g, +1); | ||||
|       PokeIndex<LorentzIndex>(Umu, U, mu_g); | ||||
|     } | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										281
									
								
								Grid/parallelIO/OpenQcdIOChromaReference.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,281 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/parallelIO/OpenQcdIOChromaReference.h | ||||
|  | ||||
| Copyright (C) 2015 - 2020 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| #include <ios> | ||||
| #include <iostream> | ||||
| #include <limits> | ||||
| #include <iomanip> | ||||
| #include <mpi.h> | ||||
| #include <ostream> | ||||
| #include <string> | ||||
|  | ||||
| #define CHECK {std::cerr << __FILE__ << " @l " << __LINE__ << ": CHECK" << grid->ThisRank() << std::endl;} | ||||
| #define CHECK_VAR(a)   { std::cerr << __FILE__ << "@l" << __LINE__ << " on "<< grid->ThisRank() << ": " << __func__ << " " << #a << "=" << (a) << std::endl; } | ||||
| // #undef CHECK | ||||
| // #define CHECK | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| class ParRdr { | ||||
| private: | ||||
|   bool const swap; | ||||
|  | ||||
|   MPI_Status status; | ||||
|   MPI_File   fp; | ||||
|  | ||||
|   int err; | ||||
|  | ||||
|   MPI_Datatype oddSiteType; | ||||
|   MPI_Datatype fileViewType; | ||||
|  | ||||
|   GridBase* grid; | ||||
|  | ||||
| public: | ||||
|   ParRdr(MPI_Comm comm, std::string const& filename, GridBase* gridPtr) | ||||
|     : swap(false) | ||||
|     , grid(gridPtr) { | ||||
|     err = MPI_File_open(comm, const_cast<char*>(filename.c_str()), MPI_MODE_RDONLY, MPI_INFO_NULL, &fp); | ||||
|     assert(err == MPI_SUCCESS); | ||||
|   } | ||||
|  | ||||
|   virtual ~ParRdr() { MPI_File_close(&fp); } | ||||
|  | ||||
|   inline void errInfo(int const err, std::string const& func) { | ||||
|     static char estring[MPI_MAX_ERROR_STRING]; | ||||
|     int         eclass = -1, len = 0; | ||||
|     MPI_Error_class(err, &eclass); | ||||
|     MPI_Error_string(err, estring, &len); | ||||
|     std::cerr << func << " - Error " << eclass << ": " << estring << std::endl; | ||||
|   } | ||||
|  | ||||
|   int readHeader(FieldMetaData& field) { | ||||
|     assert((grid->_ndimension == Nd) && (Nd == 4)); | ||||
|     assert(Nc == 3); | ||||
|  | ||||
|     OpenQcdHeader header; | ||||
|  | ||||
|     readBlock(reinterpret_cast<char*>(&header), 0, sizeof(OpenQcdHeader), MPI_CHAR); | ||||
|  | ||||
|     header.plaq /= 3.; // TODO change this into normalizationfactor | ||||
|  | ||||
|     // sanity check (should trigger on endian issues) TODO remove? | ||||
|     assert(0 < header.Nt && header.Nt <= 1024); | ||||
|     assert(0 < header.Nx && header.Nx <= 1024); | ||||
|     assert(0 < header.Ny && header.Ny <= 1024); | ||||
|     assert(0 < header.Nz && header.Nz <= 1024); | ||||
|  | ||||
|     field.dimension[0] = header.Nx; | ||||
|     field.dimension[1] = header.Ny; | ||||
|     field.dimension[2] = header.Nz; | ||||
|     field.dimension[3] = header.Nt; | ||||
|  | ||||
|     for(int d = 0; d < Nd; d++) | ||||
|       assert(grid->FullDimensions()[d] == field.dimension[d]); | ||||
|  | ||||
|     field.plaquette = header.plaq; | ||||
|  | ||||
|     field.data_start = sizeof(OpenQcdHeader); | ||||
|  | ||||
|     return field.data_start; | ||||
|   } | ||||
|  | ||||
|   void readBlock(void* const dest, uint64_t const pos, uint64_t const nbytes, MPI_Datatype const datatype) { | ||||
|     err = MPI_File_read_at_all(fp, pos, dest, nbytes, datatype, &status); | ||||
|     errInfo(err, "MPI_File_read_at_all"); | ||||
|     // CHECK_VAR(err) | ||||
|  | ||||
|     int read = -1; | ||||
|     MPI_Get_count(&status, datatype, &read); | ||||
|     // CHECK_VAR(read) | ||||
|     assert(nbytes == (uint64_t)read); | ||||
|     assert(err == MPI_SUCCESS); | ||||
|   } | ||||
|  | ||||
|   void createTypes() { | ||||
|     constexpr int elem_size = Nd * 2 * 2 * Nc * Nc * sizeof(double); // 2_complex 2_fwdbwd | ||||
|  | ||||
|     err = MPI_Type_contiguous(elem_size, MPI_BYTE, &oddSiteType); assert(err == MPI_SUCCESS); | ||||
|     err = MPI_Type_commit(&oddSiteType); assert(err == MPI_SUCCESS); | ||||
|  | ||||
|     Coordinate const L = grid->GlobalDimensions(); | ||||
|     Coordinate const l = grid->LocalDimensions(); | ||||
|     Coordinate const i = grid->ThisProcessorCoor(); | ||||
|  | ||||
|     Coordinate sizes({L[2] / 2, L[1], L[0], L[3]}); | ||||
|     Coordinate subsizes({l[2] / 2, l[1], l[0], l[3]}); | ||||
|     Coordinate starts({i[2] * l[2] / 2, i[1] * l[1], i[0] * l[0], i[3] * l[3]}); | ||||
|  | ||||
|     err = MPI_Type_create_subarray(grid->_ndimension, &sizes[0], &subsizes[0], &starts[0], MPI_ORDER_FORTRAN, oddSiteType, &fileViewType); assert(err == MPI_SUCCESS); | ||||
|     err = MPI_Type_commit(&fileViewType); assert(err == MPI_SUCCESS); | ||||
|   } | ||||
|  | ||||
|   void freeTypes() { | ||||
|     err = MPI_Type_free(&fileViewType); assert(err == MPI_SUCCESS); | ||||
|     err = MPI_Type_free(&oddSiteType); assert(err == MPI_SUCCESS); | ||||
|   } | ||||
|  | ||||
|   bool readGauge(std::vector<ColourMatrixD>& domain_buff, FieldMetaData& meta) { | ||||
|     auto hdr_offset = readHeader(meta); | ||||
|     CHECK | ||||
|     createTypes(); | ||||
|     err = MPI_File_set_view(fp, hdr_offset, oddSiteType, fileViewType, "native", MPI_INFO_NULL); errInfo(err, "MPI_File_set_view0"); assert(err == MPI_SUCCESS); | ||||
|     CHECK | ||||
|     int const domainSites = grid->lSites(); | ||||
|     domain_buff.resize(Nd * domainSites); // 2_fwdbwd * 4_Nd * domainSites / 2_onlyodd | ||||
|  | ||||
|     // the actual READ | ||||
|     constexpr uint64_t cm_size   = 2 * Nc * Nc * sizeof(double);    // 2_complex | ||||
|     constexpr uint64_t os_size   = Nd * 2 * cm_size;                // 2_fwdbwd | ||||
|     constexpr uint64_t max_elems = std::numeric_limits<int>::max(); // int adressable elems: floor is fine | ||||
|     uint64_t const     n_os      = domainSites / 2; | ||||
|  | ||||
|     for(uint64_t os_idx = 0; os_idx < n_os;) { | ||||
|       uint64_t const read_os = os_idx + max_elems <= n_os ? max_elems : n_os - os_idx; | ||||
|       uint64_t const cm      = os_idx * Nd * 2; | ||||
|       readBlock(&(domain_buff[cm]), os_idx, read_os, oddSiteType); | ||||
|       os_idx += read_os; | ||||
|     } | ||||
|  | ||||
|     CHECK | ||||
|     err = MPI_File_set_view(fp, 0, MPI_BYTE, MPI_BYTE, "native", MPI_INFO_NULL); | ||||
|   errInfo(err, "MPI_File_set_view1"); | ||||
|     assert(err == MPI_SUCCESS); | ||||
|     freeTypes(); | ||||
|  | ||||
|     std::cout << GridLogMessage << "read sum: " << n_os * os_size << " bytes" << std::endl; | ||||
|     return true; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| class OpenQcdIOChromaReference : public BinaryIO { | ||||
| public: | ||||
|   template<class vsimd> | ||||
|   static inline void readConfiguration(Lattice<iLorentzColourMatrix<vsimd>>& Umu, | ||||
|                                        Grid::FieldMetaData&                  header, | ||||
|                                        std::string                           file) { | ||||
|     typedef Lattice<iDoubleStoredColourMatrix<vsimd>> DoubledGaugeField; | ||||
|  | ||||
|     assert(Ns == 4 and Nd == 4 and Nc == 3); | ||||
|  | ||||
|     auto grid = Umu.Grid(); | ||||
|  | ||||
|     typedef ColourMatrixD fobj; | ||||
|  | ||||
|     std::vector<fobj> iodata( | ||||
|       Nd * grid->lSites()); // actual size = 2*Nd*lsites but have only lsites/2 sites in file | ||||
|  | ||||
|     { | ||||
|       ParRdr rdr(MPI_COMM_WORLD, file, grid); | ||||
|       rdr.readGauge(iodata, header); | ||||
|     } // equivalent to using binaryio | ||||
|  | ||||
|     std::vector<iDoubleStoredColourMatrix<typename vsimd::scalar_type>> Umu_ds_scalar(grid->lSites()); | ||||
|  | ||||
|     copyToLatticeObject(Umu_ds_scalar, iodata, grid); // equivalent to munging | ||||
|  | ||||
|     DoubledGaugeField Umu_ds(grid); | ||||
|  | ||||
|     vectorizeFromLexOrdArray(Umu_ds_scalar, Umu_ds); | ||||
|  | ||||
|     redistribute(Umu, Umu_ds); // equivalent to undoDoublestore | ||||
|  | ||||
|     FieldMetaData clone(header); | ||||
|  | ||||
|     PeriodicGaugeStatistics Stats; Stats(Umu, clone); | ||||
|  | ||||
|     RealD plaq_diff = fabs(clone.plaquette - header.plaquette); | ||||
|  | ||||
|     // clang-format off | ||||
|     std::cout << GridLogMessage << "OpenQcd Configuration " << file | ||||
|               << " plaquette " << clone.plaquette | ||||
|               << " header " << header.plaquette | ||||
|               << " difference " << plaq_diff | ||||
|               << std::endl; | ||||
|     // clang-format on | ||||
|  | ||||
|     RealD precTol = (getPrecision<vsimd>::value == 1) ? 2e-7 : 2e-15; | ||||
|     RealD tol     = precTol * std::sqrt(grid->_Nprocessors); // taken from RQCD chroma code | ||||
|  | ||||
|     if(plaq_diff >= tol) | ||||
|       std::cout << " Plaquette mismatch (diff = " << plaq_diff << ", tol = " << tol << ")" << std::endl; | ||||
|     assert(plaq_diff < tol); | ||||
|  | ||||
|     std::cout << GridLogMessage << "OpenQcd Configuration " << file << " and plaquette agree" << std::endl; | ||||
|   } | ||||
|  | ||||
| private: | ||||
|   template<class vsimd> | ||||
|   static inline void redistribute(Lattice<iLorentzColourMatrix<vsimd>>&            Umu, | ||||
|                                   Lattice<iDoubleStoredColourMatrix<vsimd>> const& Umu_ds) { | ||||
|     Grid::conformable(Umu.Grid(), Umu_ds.Grid()); | ||||
|     Lattice<iColourMatrix<vsimd>> U(Umu.Grid()); | ||||
|  | ||||
|     U = PeekIndex<LorentzIndex>(Umu_ds, 2) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 3), 0, +1); PokeIndex<LorentzIndex>(Umu, U, 0); | ||||
|     U = PeekIndex<LorentzIndex>(Umu_ds, 4) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 5), 1, +1); PokeIndex<LorentzIndex>(Umu, U, 1); | ||||
|     U = PeekIndex<LorentzIndex>(Umu_ds, 6) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 7), 2, +1); PokeIndex<LorentzIndex>(Umu, U, 2); | ||||
|     U = PeekIndex<LorentzIndex>(Umu_ds, 0) + Cshift(PeekIndex<LorentzIndex>(Umu_ds, 1), 3, +1); PokeIndex<LorentzIndex>(Umu, U, 3); | ||||
|   } | ||||
|  | ||||
|   static inline void copyToLatticeObject(std::vector<DoubleStoredColourMatrix>& u_fb, | ||||
|                                          std::vector<ColourMatrixD> const&      node_buff, | ||||
|                                          GridBase*                              grid) { | ||||
|     assert(node_buff.size() == Nd * grid->lSites()); | ||||
|  | ||||
|     Coordinate const& l = grid->LocalDimensions(); | ||||
|  | ||||
|     Coordinate coord(Nd); | ||||
|     int&       x = coord[0]; | ||||
|     int&       y = coord[1]; | ||||
|     int&       z = coord[2]; | ||||
|     int&       t = coord[3]; | ||||
|  | ||||
|     int buff_idx = 0; | ||||
|     for(t = 0; t < l[3]; ++t) // IMPORTANT: openQCD file ordering | ||||
|       for(x = 0; x < l[0]; ++x) | ||||
|         for(y = 0; y < l[1]; ++y) | ||||
|           for(z = 0; z < l[2]; ++z) { | ||||
|             if((t + z + y + x) % 2 == 0) continue; | ||||
|  | ||||
|             int local_idx; | ||||
|             Lexicographic::IndexFromCoor(coord, local_idx, grid->LocalDimensions()); | ||||
|             for(int mu = 0; mu < 2 * Nd; ++mu) | ||||
|               for(int c1 = 0; c1 < Nc; ++c1) { | ||||
|                 for(int c2 = 0; c2 < Nc; ++c2) { | ||||
|                   u_fb[local_idx](mu)()(c1,c2) = node_buff[mu+buff_idx]()()(c1,c2); | ||||
|                 } | ||||
|               } | ||||
|             buff_idx += 2 * Nd; | ||||
|           } | ||||
|  | ||||
|     assert(node_buff.size() == buff_idx); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -27,10 +27,13 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #include <Grid/GridCore.h> | ||||
| #include <Grid/perfmon/PerfCount.h> | ||||
|  | ||||
| #include <Grid/perfmon/Timer.h> | ||||
| #include <Grid/perfmon/PerfCount.h> | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| GridTimePoint theProgramStart = GridClock::now(); | ||||
|  | ||||
| #define CacheControl(L,O,R) ((PERF_COUNT_HW_CACHE_##L)|(PERF_COUNT_HW_CACHE_OP_##O<<8)| (PERF_COUNT_HW_CACHE_RESULT_##R<<16)) | ||||
| #define RawConfig(A,B) (A<<8|B) | ||||
| const PerformanceCounter::PerformanceCounterConfig PerformanceCounter::PerformanceCounterConfigs [] = { | ||||
|   | ||||
| @@ -30,6 +30,12 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #ifndef GRID_PERFCOUNT_H | ||||
| #define GRID_PERFCOUNT_H | ||||
|  | ||||
|  | ||||
| #ifndef __SSC_START | ||||
| #define __SSC_START | ||||
| #define __SSC_STOP | ||||
| #endif | ||||
|  | ||||
| #include <sys/time.h> | ||||
| #include <ctime> | ||||
| #include <chrono> | ||||
| @@ -44,7 +50,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <sys/syscall.h> | ||||
| #endif | ||||
| #ifdef __x86_64__ | ||||
| #ifdef GRID_NVCC | ||||
| #ifdef GRID_CUDA | ||||
| accelerator_inline uint64_t __rdtsc(void) {  return 0; } | ||||
| accelerator_inline uint64_t __rdpmc(int ) {  return 0; } | ||||
| #else | ||||
| @@ -72,17 +78,9 @@ static long perf_event_open(struct perf_event_attr *hw_event, pid_t pid, | ||||
| inline uint64_t cyclecount(void){  | ||||
|   return 0; | ||||
| } | ||||
| #define __SSC_MARK(mark) __asm__ __volatile__ ("movl %0, %%ebx; .byte 0x64, 0x67, 0x90 " ::"i"(mark):"%ebx") | ||||
| #define __SSC_STOP  __SSC_MARK(0x110) | ||||
| #define __SSC_START __SSC_MARK(0x111) | ||||
|  | ||||
|  | ||||
| #else | ||||
|  | ||||
| #define __SSC_MARK(mark)  | ||||
| #define __SSC_STOP   | ||||
| #define __SSC_START  | ||||
|  | ||||
| /* | ||||
|  * cycle counters arch dependent | ||||
|  */ | ||||
| @@ -95,7 +93,8 @@ inline uint64_t cyclecount(void){ | ||||
| } | ||||
| #elif defined __x86_64__ | ||||
| inline uint64_t cyclecount(void){  | ||||
|   return __rdtsc(); | ||||
|   uint64_t ret = __rdtsc(); | ||||
|   return (uint64_t)ret; | ||||
| } | ||||
| #else | ||||
|  | ||||
| @@ -111,7 +110,6 @@ class PerformanceCounter { | ||||
| private: | ||||
|  | ||||
|   typedef struct {  | ||||
|   public: | ||||
|     uint32_t type; | ||||
|     uint64_t config; | ||||
|     const char *name; | ||||
|   | ||||
| @@ -35,17 +35,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid) | ||||
|  | ||||
| // Dress the output; use std::chrono | ||||
| // C++11 time facilities better? | ||||
| inline double usecond(void) { | ||||
|   struct timeval tv; | ||||
| #ifdef TIMERS_ON | ||||
|   gettimeofday(&tv,NULL); | ||||
| #endif | ||||
|   return 1.0*tv.tv_usec + 1.0e6*tv.tv_sec; | ||||
| } | ||||
|  | ||||
| typedef  std::chrono::system_clock          GridClock; | ||||
| //typedef  std::chrono::system_clock          GridClock; | ||||
| typedef  std::chrono::high_resolution_clock   GridClock; | ||||
| typedef  std::chrono::time_point<GridClock> GridTimePoint; | ||||
|  | ||||
| typedef  std::chrono::seconds               GridSecs; | ||||
| @@ -53,6 +44,15 @@ typedef  std::chrono::milliseconds          GridMillisecs; | ||||
| typedef  std::chrono::microseconds          GridUsecs; | ||||
| typedef  std::chrono::microseconds          GridTime; | ||||
|  | ||||
| extern GridTimePoint theProgramStart; | ||||
| // Dress the output; use std::chrono | ||||
| // C++11 time facilities better? | ||||
| inline double usecond(void) { | ||||
|   auto usecs = std::chrono::duration_cast<GridUsecs>(GridClock::now()-theProgramStart);  | ||||
|   return 1.0*usecs.count(); | ||||
| } | ||||
|  | ||||
|  | ||||
| inline std::ostream& operator<< (std::ostream & stream, const GridSecs & time) | ||||
| { | ||||
|   stream << time.count()<<" s"; | ||||
| @@ -110,15 +110,15 @@ public: | ||||
| #endif | ||||
|     accumulator = std::chrono::duration_cast<GridUsecs>(start-start);  | ||||
|   } | ||||
|   GridTime Elapsed(void) { | ||||
|   GridTime Elapsed(void) const { | ||||
|     assert(running == false); | ||||
|     return std::chrono::duration_cast<GridTime>( accumulator ); | ||||
|   } | ||||
|   uint64_t useconds(void){ | ||||
|   uint64_t useconds(void) const { | ||||
|     assert(running == false); | ||||
|     return (uint64_t) accumulator.count(); | ||||
|   } | ||||
|   bool isRunning(void){ | ||||
|   bool isRunning(void) const { | ||||
|     return running; | ||||
|   } | ||||
| }; | ||||
|   | ||||
							
								
								
									
										70
									
								
								Grid/perfmon/Tracing.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										70
									
								
								Grid/perfmon/Tracing.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,70 @@ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #ifdef GRID_TRACING_NVTX | ||||
| #include <nvToolsExt.h> | ||||
| class GridTracer { | ||||
| public: | ||||
|   GridTracer(const char* name) { | ||||
|     nvtxRangePushA(name); | ||||
|   } | ||||
|   ~GridTracer() { | ||||
|     nvtxRangePop(); | ||||
|   } | ||||
| }; | ||||
| inline void tracePush(const char *name) { nvtxRangePushA(name); } | ||||
| inline void tracePop(const char *name) { nvtxRangePop(); } | ||||
| inline int  traceStart(const char *name) {  } | ||||
| inline void traceStop(int ID) {  } | ||||
| #endif | ||||
|  | ||||
| #ifdef GRID_TRACING_ROCTX | ||||
| #include <roctracer/roctx.h> | ||||
| class GridTracer { | ||||
|  public: | ||||
|   GridTracer(const char* name) { | ||||
|     roctxRangePushA(name); | ||||
|     std::cout << "roctxRangePush "<<name<<std::endl; | ||||
|   } | ||||
|   ~GridTracer() { | ||||
|     roctxRangePop(); | ||||
|     std::cout << "roctxRangePop "<<std::endl; | ||||
|   } | ||||
| }; | ||||
| inline void tracePush(const char *name) { roctxRangePushA(name); } | ||||
| inline void tracePop(const char *name) { roctxRangePop(); } | ||||
| inline int  traceStart(const char *name) { roctxRangeStart(name); } | ||||
| inline void traceStop(int ID) { roctxRangeStop(ID); } | ||||
| #endif | ||||
|  | ||||
| #ifdef GRID_TRACING_TIMER | ||||
| class GridTracer { | ||||
|  public: | ||||
|   const char *name; | ||||
|   double elapsed; | ||||
|   GridTracer(const char* _name) { | ||||
|     name = _name; | ||||
|     elapsed=-usecond(); | ||||
|   } | ||||
|   ~GridTracer() { | ||||
|     elapsed+=usecond(); | ||||
|     std::cout << GridLogTracing << name << " took " <<elapsed<< " us" <<std::endl; | ||||
|   } | ||||
| }; | ||||
| inline void tracePush(const char *name) {  } | ||||
| inline void tracePop(const char *name) {  } | ||||
| inline int  traceStart(const char *name) { return 0; } | ||||
| inline void traceStop(int ID) {  } | ||||
| #endif | ||||
|  | ||||
| #ifdef GRID_TRACING_NONE | ||||
| #define GRID_TRACE(name)  | ||||
| inline void tracePush(const char *name) {  } | ||||
| inline void tracePop(const char *name) {  } | ||||
| inline int  traceStart(const char *name) { return 0;  } | ||||
| inline void traceStop(int ID) {  } | ||||
| #else | ||||
| #define GRID_TRACE(name) GridTracer uniq_name_using_macros##__COUNTER__(name); | ||||
| #endif | ||||
| NAMESPACE_END(Grid); | ||||
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