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			2343 Commits
		
	
	
		
			feature/bl
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			feature/co
		
	
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|  | 53cfa44d7a | 
							
								
								
									
										1
									
								
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							| @@ -114,3 +114,4 @@ gh-pages/ | |||||||
| ##################### | ##################### | ||||||
| Grid/qcd/spin/gamma-gen/*.h | Grid/qcd/spin/gamma-gen/*.h | ||||||
| Grid/qcd/spin/gamma-gen/*.cc | Grid/qcd/spin/gamma-gen/*.cc | ||||||
|  | Grid/util/Version.h | ||||||
|   | |||||||
| @@ -9,11 +9,6 @@ matrix: | |||||||
|     - os:        osx |     - os:        osx | ||||||
|       osx_image: xcode8.3 |       osx_image: xcode8.3 | ||||||
|       compiler: clang |       compiler: clang | ||||||
|       env: PREC=single |  | ||||||
|     - os:        osx |  | ||||||
|       osx_image: xcode8.3 |  | ||||||
|       compiler: clang |  | ||||||
|       env: PREC=double |  | ||||||
|        |        | ||||||
| before_install: | before_install: | ||||||
|     - export GRIDDIR=`pwd` |     - export GRIDDIR=`pwd` | ||||||
| @@ -55,7 +50,7 @@ script: | |||||||
|     - make -j4 |     - make -j4 | ||||||
|     - make install |     - make install | ||||||
|     - cd $CWD/build |     - cd $CWD/build | ||||||
|     - ../configure --enable-precision=$PREC --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF} |     - ../configure --enable-simd=SSE4 --enable-comms=none --with-lime=$CWD/build/lime/install ${EXTRACONF} | ||||||
|     - make -j4  |     - make -j4  | ||||||
|     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals |     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals | ||||||
|     - make check |     - make check | ||||||
|   | |||||||
| @@ -0,0 +1,5 @@ | |||||||
|  | Version : 0.8.0 | ||||||
|  |  | ||||||
|  | - Clang 3.5 and above, ICPC v16 and above, GCC 6.3 and above recommended | ||||||
|  | - MPI and MPI3 comms optimisations for KNL and OPA finished | ||||||
|  | - Half precision comms | ||||||
|   | |||||||
| @@ -30,8 +30,36 @@ directory | |||||||
| #ifndef DISABLE_WARNINGS_H | #ifndef DISABLE_WARNINGS_H | ||||||
| #define DISABLE_WARNINGS_H | #define DISABLE_WARNINGS_H | ||||||
|  |  | ||||||
|  //disables and intel compiler specific warning (in json.hpp) |  | ||||||
| #pragma warning disable 488   |  | ||||||
|  |  | ||||||
|  |  | ||||||
|  | #if defined __GNUC__ && __GNUC__>=6 | ||||||
|  | #pragma GCC diagnostic ignored "-Wignored-attributes" | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |  //disables and intel compiler specific warning (in json.hpp) | ||||||
|  | #ifdef __ICC | ||||||
|  | #pragma warning disable 488   | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | #ifdef __NVCC__ | ||||||
|  |  //disables nvcc specific warning in json.hpp | ||||||
|  | #pragma clang diagnostic ignored "-Wdeprecated-register" | ||||||
|  | #pragma diag_suppress unsigned_compare_with_zero | ||||||
|  | #pragma diag_suppress cast_to_qualified_type | ||||||
|  |  | ||||||
|  |  //disables nvcc specific warning in many files | ||||||
|  | #pragma diag_suppress esa_on_defaulted_function_ignored | ||||||
|  | #pragma diag_suppress extra_semicolon | ||||||
|  |  | ||||||
|  | //Eigen only | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | // Disable vectorisation in Eigen on the Power8/9 and PowerPC | ||||||
|  | #ifdef  __ALTIVEC__ | ||||||
|  | #define  EIGEN_DONT_VECTORIZE | ||||||
|  | #endif | ||||||
|  | #ifdef  __VSX__ | ||||||
|  | #define  EIGEN_DONT_VECTORIZE | ||||||
|  | #endif | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -42,6 +42,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/GridQCDcore.h> | #include <Grid/GridQCDcore.h> | ||||||
| #include <Grid/qcd/action/Action.h> | #include <Grid/qcd/action/Action.h> | ||||||
| #include <Grid/qcd/utils/GaugeFix.h> | #include <Grid/qcd/utils/GaugeFix.h> | ||||||
|  | #include <Grid/qcd/utils/CovariantSmearing.h> | ||||||
| #include <Grid/qcd/smearing/Smearing.h> | #include <Grid/qcd/smearing/Smearing.h> | ||||||
| #include <Grid/parallelIO/MetaData.h> | #include <Grid/parallelIO/MetaData.h> | ||||||
| #include <Grid/qcd/hmc/HMC_aggregate.h> | #include <Grid/qcd/hmc/HMC_aggregate.h> | ||||||
|   | |||||||
| @@ -38,16 +38,19 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_BASE_H | #ifndef GRID_BASE_H | ||||||
| #define GRID_BASE_H | #define GRID_BASE_H | ||||||
|  |  | ||||||
| #include <Grid/GridStd.h> |  | ||||||
|  |  | ||||||
|  | #include <Grid/DisableWarnings.h> | ||||||
|  | #include <Grid/Namespace.h> | ||||||
|  | #include <Grid/GridStd.h> | ||||||
|  | #include <Grid/threads/Pragmas.h> | ||||||
| #include <Grid/perfmon/Timer.h> | #include <Grid/perfmon/Timer.h> | ||||||
| #include <Grid/perfmon/PerfCount.h> | #include <Grid/perfmon/PerfCount.h> | ||||||
| #include <Grid/log/Log.h> |  | ||||||
| #include <Grid/allocator/AlignedAllocator.h> |  | ||||||
| #include <Grid/simd/Simd.h> |  | ||||||
| #include <Grid/serialisation/Serialisation.h> |  | ||||||
| #include <Grid/threads/Threads.h> |  | ||||||
| #include <Grid/util/Util.h> | #include <Grid/util/Util.h> | ||||||
|  | #include <Grid/log/Log.h> | ||||||
|  | #include <Grid/allocator/Allocator.h> | ||||||
|  | #include <Grid/simd/Simd.h> | ||||||
|  | #include <Grid/threads/ThreadReduction.h> | ||||||
|  | #include <Grid/serialisation/Serialisation.h> | ||||||
| #include <Grid/util/Sha.h> | #include <Grid/util/Sha.h> | ||||||
| #include <Grid/communicator/Communicator.h>  | #include <Grid/communicator/Communicator.h>  | ||||||
| #include <Grid/cartesian/Cartesian.h>     | #include <Grid/cartesian/Cartesian.h>     | ||||||
| @@ -57,5 +60,6 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/stencil/Stencil.h>       | #include <Grid/stencil/Stencil.h>       | ||||||
| #include <Grid/parallelIO/BinaryIO.h> | #include <Grid/parallelIO/BinaryIO.h> | ||||||
| #include <Grid/algorithms/Algorithms.h>    | #include <Grid/algorithms/Algorithms.h>    | ||||||
|  | NAMESPACE_CHECK(GridCore) | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -38,5 +38,6 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/qcd/spin/Spin.h> | #include <Grid/qcd/spin/Spin.h> | ||||||
| #include <Grid/qcd/utils/Utils.h> | #include <Grid/qcd/utils/Utils.h> | ||||||
| #include <Grid/qcd/representations/Representations.h> | #include <Grid/qcd/representations/Representations.h> | ||||||
|  | NAMESPACE_CHECK(GridQCDCore); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -6,7 +6,9 @@ | |||||||
| /////////////////// | /////////////////// | ||||||
| #include <cassert> | #include <cassert> | ||||||
| #include <complex> | #include <complex> | ||||||
|  | #include <memory> | ||||||
| #include <vector> | #include <vector> | ||||||
|  | #include <array> | ||||||
| #include <string> | #include <string> | ||||||
| #include <iostream> | #include <iostream> | ||||||
| #include <iomanip> | #include <iomanip> | ||||||
| @@ -26,4 +28,7 @@ | |||||||
| /////////////////// | /////////////////// | ||||||
| #include "Config.h" | #include "Config.h" | ||||||
|  |  | ||||||
|  | #ifdef TOFU | ||||||
|  | #undef GRID_COMMS_THREADS | ||||||
|  | #endif | ||||||
| #endif /* GRID_STD_H */ | #endif /* GRID_STD_H */ | ||||||
|   | |||||||
| @@ -1,14 +1,71 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
| #pragma once | #pragma once | ||||||
| // Force Eigen to use MKL if Grid has been configured with --enable-mkl | // Force Eigen to use MKL if Grid has been configured with --enable-mkl | ||||||
| #ifdef USE_MKL | #ifdef USE_MKL | ||||||
| #define EIGEN_USE_MKL_ALL | #define EIGEN_USE_MKL_ALL | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
| #if defined __GNUC__ | #if defined __GNUC__ | ||||||
| #pragma GCC diagnostic push | #pragma GCC diagnostic push | ||||||
| #pragma GCC diagnostic ignored "-Wdeprecated-declarations" | #pragma GCC diagnostic ignored "-Wdeprecated-declarations" | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  | /* NVCC save and restore compile environment*/ | ||||||
|  | #ifdef __NVCC__ | ||||||
|  | #pragma push | ||||||
|  | #pragma diag_suppress code_is_unreachable | ||||||
|  | #pragma push_macro("__CUDA_ARCH__") | ||||||
|  | #pragma push_macro("__NVCC__") | ||||||
|  | #pragma push_macro("__CUDACC__") | ||||||
|  | #undef __CUDA_ARCH__ | ||||||
|  | #undef __NVCC__ | ||||||
|  | #undef __CUDACC__ | ||||||
|  | #define __NVCC__REDEFINE__ | ||||||
|  | #endif  | ||||||
|  |  | ||||||
|  | /* SYCL save and restore compile environment*/ | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  | #pragma push | ||||||
|  | #pragma push_macro("__SYCL_DEVICE_ONLY__") | ||||||
|  | #undef __SYCL_DEVICE_ONLY__ | ||||||
|  | #define EIGEN_DONT_VECTORIZE | ||||||
|  | //#undef EIGEN_USE_SYCL | ||||||
|  | #define __SYCL__REDEFINE__ | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | /* HIP save and restore compile environment*/ | ||||||
|  | #ifdef GRID_HIP | ||||||
|  | #pragma push | ||||||
|  | #pragma push_macro("__HIP_DEVICE_COMPILE__") | ||||||
|  | #endif | ||||||
|  | #define EIGEN_NO_HIP | ||||||
|  |  | ||||||
| #include <Grid/Eigen/Dense> | #include <Grid/Eigen/Dense> | ||||||
|  | #include <Grid/Eigen/unsupported/CXX11/Tensor> | ||||||
|  |  | ||||||
|  | /* NVCC restore */ | ||||||
|  | #ifdef __NVCC__REDEFINE__ | ||||||
|  | #pragma pop_macro("__CUDACC__") | ||||||
|  | #pragma pop_macro("__NVCC__") | ||||||
|  | #pragma pop_macro("__CUDA_ARCH__") | ||||||
|  | #pragma pop | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | /*SYCL restore*/ | ||||||
|  | #ifdef __SYCL__REDEFINE__ | ||||||
|  | #pragma pop_macro("__SYCL_DEVICE_ONLY__") | ||||||
|  | #pragma pop | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | /*HIP restore*/ | ||||||
|  | #ifdef __HIP__REDEFINE__ | ||||||
|  | #pragma pop_macro("__HIP_DEVICE_COMPILE__") | ||||||
|  | #pragma pop | ||||||
|  | #endif | ||||||
|  |  | ||||||
| #if defined __GNUC__ | #if defined __GNUC__ | ||||||
| #pragma GCC diagnostic pop | #pragma GCC diagnostic pop | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										1
									
								
								Grid/Grid_Eigen_Tensor.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										1
									
								
								Grid/Grid_Eigen_Tensor.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1 @@ | |||||||
|  | #include <Grid/Grid_Eigen_Dense.h> | ||||||
| @@ -21,7 +21,8 @@ if BUILD_HDF5 | |||||||
|   extra_headers+=serialisation/Hdf5Type.h |   extra_headers+=serialisation/Hdf5Type.h | ||||||
| endif | endif | ||||||
|  |  | ||||||
| all: version-cache |  | ||||||
|  | all: version-cache Version.h | ||||||
|  |  | ||||||
| version-cache: | version-cache: | ||||||
| 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | ||||||
| @@ -42,7 +43,7 @@ version-cache: | |||||||
| 	fi;\ | 	fi;\ | ||||||
| 	rm -f vertmp | 	rm -f vertmp | ||||||
|  |  | ||||||
| Version.h: | Version.h: version-cache | ||||||
| 	cp version-cache Version.h | 	cp version-cache Version.h | ||||||
|  |  | ||||||
| .PHONY: version-cache | .PHONY: version-cache | ||||||
| @@ -53,6 +54,17 @@ Version.h: | |||||||
| include Make.inc | include Make.inc | ||||||
| include Eigen.inc | include Eigen.inc | ||||||
|  |  | ||||||
|  | extra_sources+=$(ZWILS_FERMION_FILES) | ||||||
|  | extra_sources+=$(WILS_FERMION_FILES) | ||||||
|  | extra_sources+=$(STAG_FERMION_FILES) | ||||||
|  | if BUILD_GPARITY | ||||||
|  |   extra_sources+=$(GP_FERMION_FILES) | ||||||
|  | endif | ||||||
|  | if BUILD_FERMION_REPS | ||||||
|  |   extra_sources+=$(ADJ_FERMION_FILES) | ||||||
|  |   extra_sources+=$(TWOIND_FERMION_FILES) | ||||||
|  | endif | ||||||
|  |  | ||||||
| lib_LIBRARIES = libGrid.a | lib_LIBRARIES = libGrid.a | ||||||
|  |  | ||||||
| CCFILES += $(extra_sources) | CCFILES += $(extra_sources) | ||||||
|   | |||||||
							
								
								
									
										38
									
								
								Grid/Namespace.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										38
									
								
								Grid/Namespace.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,38 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/Namespace.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2016 | ||||||
|  |  | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | #include <type_traits> | ||||||
|  | #include <cassert> | ||||||
|  |  | ||||||
|  | #define NAMESPACE_BEGIN(A) namespace A { | ||||||
|  | #define NAMESPACE_END(A)   } | ||||||
|  | #define GRID_NAMESPACE_BEGIN NAMESPACE_BEGIN(Grid) | ||||||
|  | #define GRID_NAMESPACE_END   NAMESPACE_END(Grid) | ||||||
|  | #define NAMESPACE_CHECK(x) struct namespaceTEST##x {};  static_assert(std::is_same<namespaceTEST##x, ::namespaceTEST##x>::value,"Not in :: at"  );  | ||||||
| @@ -29,33 +29,46 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_ALGORITHMS_H | #ifndef GRID_ALGORITHMS_H | ||||||
| #define GRID_ALGORITHMS_H | #define GRID_ALGORITHMS_H | ||||||
|  |  | ||||||
|  | NAMESPACE_CHECK(algorithms); | ||||||
| #include <Grid/algorithms/SparseMatrix.h> | #include <Grid/algorithms/SparseMatrix.h> | ||||||
| #include <Grid/algorithms/LinearOperator.h> | #include <Grid/algorithms/LinearOperator.h> | ||||||
| #include <Grid/algorithms/Preconditioner.h> | #include <Grid/algorithms/Preconditioner.h> | ||||||
|  | NAMESPACE_CHECK(SparseMatrix); | ||||||
|  |  | ||||||
| #include <Grid/algorithms/approx/Zolotarev.h> | #include <Grid/algorithms/approx/Zolotarev.h> | ||||||
| #include <Grid/algorithms/approx/Chebyshev.h> | #include <Grid/algorithms/approx/Chebyshev.h> | ||||||
|  | #include <Grid/algorithms/approx/JacobiPolynomial.h> | ||||||
| #include <Grid/algorithms/approx/Remez.h> | #include <Grid/algorithms/approx/Remez.h> | ||||||
| #include <Grid/algorithms/approx/MultiShiftFunction.h> | #include <Grid/algorithms/approx/MultiShiftFunction.h> | ||||||
| #include <Grid/algorithms/approx/Forecast.h> | #include <Grid/algorithms/approx/Forecast.h> | ||||||
|  | #include <Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  | #include <Grid/algorithms/approx/ZMobius.h> | ||||||
|  | NAMESPACE_CHECK(approx); | ||||||
| #include <Grid/algorithms/iterative/Deflation.h> | #include <Grid/algorithms/iterative/Deflation.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradient.h> | #include <Grid/algorithms/iterative/ConjugateGradient.h> | ||||||
|  | NAMESPACE_CHECK(ConjGrad); | ||||||
|  | #include <Grid/algorithms/iterative/BiCGSTAB.h> | ||||||
|  | NAMESPACE_CHECK(BiCGSTAB); | ||||||
| #include <Grid/algorithms/iterative/ConjugateResidual.h> | #include <Grid/algorithms/iterative/ConjugateResidual.h> | ||||||
| #include <Grid/algorithms/iterative/NormalEquations.h> | #include <Grid/algorithms/iterative/NormalEquations.h> | ||||||
| #include <Grid/algorithms/iterative/SchurRedBlack.h> | #include <Grid/algorithms/iterative/SchurRedBlack.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | ||||||
|  | #include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h> | ||||||
| #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | ||||||
| #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | ||||||
|  | #include <Grid/algorithms/iterative/MinimalResidual.h> | ||||||
|  | #include <Grid/algorithms/iterative/GeneralisedMinimalResidual.h> | ||||||
|  | #include <Grid/algorithms/iterative/CommunicationAvoidingGeneralisedMinimalResidual.h> | ||||||
|  | #include <Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h> | ||||||
|  | #include <Grid/algorithms/iterative/FlexibleCommunicationAvoidingGeneralisedMinimalResidual.h> | ||||||
|  | #include <Grid/algorithms/iterative/MixedPrecisionFlexibleGeneralisedMinimalResidual.h> | ||||||
| #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | ||||||
|  | #include <Grid/algorithms/iterative/PowerMethod.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_CHECK(PowerMethod); | ||||||
| #include <Grid/algorithms/CoarsenedMatrix.h> | #include <Grid/algorithms/CoarsenedMatrix.h> | ||||||
|  | NAMESPACE_CHECK(CoarsendMatrix); | ||||||
| #include <Grid/algorithms/FFT.h> | #include <Grid/algorithms/FFT.h> | ||||||
|  |  | ||||||
| // EigCg |  | ||||||
| // Pcg |  | ||||||
| // Hdcg |  | ||||||
| // GCR |  | ||||||
| // etc.. |  | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
										
											
												File diff suppressed because it is too large
												Load Diff
											
										
									
								
							| @@ -1,4 +1,3 @@ | |||||||
|  |  | ||||||
| /************************************************************************************* | /************************************************************************************* | ||||||
|  |  | ||||||
|     Grid physics library, www.github.com/paboyle/Grid  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
| @@ -37,8 +36,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #endif | #endif | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
| namespace Grid { |  | ||||||
|  |  | ||||||
| template<class scalar> struct FFTW { }; | template<class scalar> struct FFTW { }; | ||||||
|  |  | ||||||
| @@ -115,9 +113,9 @@ namespace Grid { | |||||||
|   double flops_call; |   double flops_call; | ||||||
|   uint64_t usec; |   uint64_t usec; | ||||||
|      |      | ||||||
|     std::vector<int> dimensions; |   Coordinate dimensions; | ||||||
|     std::vector<int> processors; |   Coordinate processors; | ||||||
|     std::vector<int> processor_coor; |   Coordinate processor_coor; | ||||||
|      |      | ||||||
| public: | public: | ||||||
|      |      | ||||||
| @@ -137,7 +135,7 @@ namespace Grid { | |||||||
|   { |   { | ||||||
|     flops=0; |     flops=0; | ||||||
|     usec =0; |     usec =0; | ||||||
|       std::vector<int> layout(Nd,1); |     Coordinate layout(Nd,1); | ||||||
|     sgrid = new GridCartesian(dimensions,layout,processors); |     sgrid = new GridCartesian(dimensions,layout,processors); | ||||||
|   }; |   }; | ||||||
|      |      | ||||||
| @@ -146,10 +144,10 @@ namespace Grid { | |||||||
|   } |   } | ||||||
|      |      | ||||||
|   template<class vobj> |   template<class vobj> | ||||||
|     void FFT_dim_mask(Lattice<vobj> &result,const Lattice<vobj> &source,std::vector<int> mask,int sign){ |   void FFT_dim_mask(Lattice<vobj> &result,const Lattice<vobj> &source,Coordinate mask,int sign){ | ||||||
|  |  | ||||||
|       conformable(result._grid,vgrid); |     conformable(result.Grid(),vgrid); | ||||||
|       conformable(source._grid,vgrid); |     conformable(source.Grid(),vgrid); | ||||||
|     Lattice<vobj> tmp(vgrid); |     Lattice<vobj> tmp(vgrid); | ||||||
|     tmp = source; |     tmp = source; | ||||||
|     for(int d=0;d<Nd;d++){ |     for(int d=0;d<Nd;d++){ | ||||||
| @@ -162,7 +160,7 @@ namespace Grid { | |||||||
|  |  | ||||||
|   template<class vobj> |   template<class vobj> | ||||||
|   void FFT_all_dim(Lattice<vobj> &result,const Lattice<vobj> &source,int sign){ |   void FFT_all_dim(Lattice<vobj> &result,const Lattice<vobj> &source,int sign){ | ||||||
|       std::vector<int> mask(Nd,1); |     Coordinate mask(Nd,1); | ||||||
|     FFT_dim_mask(result,source,mask,sign); |     FFT_dim_mask(result,source,mask,sign); | ||||||
|   } |   } | ||||||
|  |  | ||||||
| @@ -172,14 +170,14 @@ namespace Grid { | |||||||
| #ifndef HAVE_FFTW | #ifndef HAVE_FFTW | ||||||
|     assert(0); |     assert(0); | ||||||
| #else | #else | ||||||
|       conformable(result._grid,vgrid); |     conformable(result.Grid(),vgrid); | ||||||
|       conformable(source._grid,vgrid); |     conformable(source.Grid(),vgrid); | ||||||
|  |  | ||||||
|     int L = vgrid->_ldimensions[dim]; |     int L = vgrid->_ldimensions[dim]; | ||||||
|     int G = vgrid->_fdimensions[dim]; |     int G = vgrid->_fdimensions[dim]; | ||||||
|        |        | ||||||
|       std::vector<int> layout(Nd,1); |     Coordinate layout(Nd,1); | ||||||
|       std::vector<int> pencil_gd(vgrid->_fdimensions); |     Coordinate pencil_gd(vgrid->_fdimensions); | ||||||
|        |        | ||||||
|     pencil_gd[dim] = G*processors[dim]; |     pencil_gd[dim] = G*processors[dim]; | ||||||
|        |        | ||||||
| @@ -191,7 +189,7 @@ namespace Grid { | |||||||
|     typedef typename sobj::scalar_type   scalar; |     typedef typename sobj::scalar_type   scalar; | ||||||
|        |        | ||||||
|     Lattice<sobj> pgbuf(&pencil_g); |     Lattice<sobj> pgbuf(&pencil_g); | ||||||
|        |     autoView(pgbuf_v , pgbuf, CpuWrite); | ||||||
|  |  | ||||||
|     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; |     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; | ||||||
|     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; |     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; | ||||||
| @@ -217,8 +215,8 @@ namespace Grid { | |||||||
|        |        | ||||||
|     FFTW_plan p; |     FFTW_plan p; | ||||||
|     { |     { | ||||||
|         FFTW_scalar *in = (FFTW_scalar *)&pgbuf._odata[0]; |       FFTW_scalar *in = (FFTW_scalar *)&pgbuf_v[0]; | ||||||
|         FFTW_scalar *out= (FFTW_scalar *)&pgbuf._odata[0]; |       FFTW_scalar *out= (FFTW_scalar *)&pgbuf_v[0]; | ||||||
|       p = FFTW<scalar>::fftw_plan_many_dft(rank,n,howmany, |       p = FFTW<scalar>::fftw_plan_many_dft(rank,n,howmany, | ||||||
| 					   in,inembed, | 					   in,inembed, | ||||||
| 					   istride,idist, | 					   istride,idist, | ||||||
| @@ -228,26 +226,23 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|        |        | ||||||
|     // Barrel shift and collect global pencil |     // Barrel shift and collect global pencil | ||||||
|       std::vector<int> lcoor(Nd), gcoor(Nd); |     Coordinate lcoor(Nd), gcoor(Nd); | ||||||
|     result = source; |     result = source; | ||||||
|     int pc = processor_coor[dim]; |     int pc = processor_coor[dim]; | ||||||
|     for(int p=0;p<processors[dim];p++) { |     for(int p=0;p<processors[dim];p++) { | ||||||
|         PARALLEL_REGION |  | ||||||
|       { |       { | ||||||
|           std::vector<int> cbuf(Nd); | 	autoView(r_v,result,CpuRead); | ||||||
|  | 	autoView(p_v,pgbuf,CpuWrite); | ||||||
|  | 	thread_for(idx, sgrid->lSites(),{ | ||||||
|  |           Coordinate cbuf(Nd); | ||||||
|           sobj s; |           sobj s; | ||||||
|            |  | ||||||
|           PARALLEL_FOR_LOOP_INTERN |  | ||||||
|           for(int idx=0;idx<sgrid->lSites();idx++) { |  | ||||||
| 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | ||||||
|             peekLocalSite(s,result,cbuf); | 	  peekLocalSite(s,r_v,cbuf); | ||||||
| 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | ||||||
| 	    //            cbuf[dim]+=p*L; | 	  pokeLocalSite(s,p_v,cbuf); | ||||||
|             pokeLocalSite(s,pgbuf,cbuf); |         }); | ||||||
|       } |       } | ||||||
|         } |       if (p != processors[dim] - 1) { | ||||||
|         if (p != processors[dim] - 1) |  | ||||||
|         { |  | ||||||
| 	result = Cshift(result,dim,L); | 	result = Cshift(result,dim,L); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
| @@ -256,20 +251,15 @@ namespace Grid { | |||||||
|     int NN=pencil_g.lSites(); |     int NN=pencil_g.lSites(); | ||||||
|     GridStopWatch timer; |     GridStopWatch timer; | ||||||
|     timer.Start(); |     timer.Start(); | ||||||
|       PARALLEL_REGION |     thread_for( idx,NN,{ | ||||||
|       { |         Coordinate cbuf(Nd); | ||||||
|         std::vector<int> cbuf(Nd); |  | ||||||
|          |  | ||||||
|         PARALLEL_FOR_LOOP_INTERN |  | ||||||
|         for(int idx=0;idx<NN;idx++) { |  | ||||||
| 	pencil_g.LocalIndexToLocalCoor(idx, cbuf); | 	pencil_g.LocalIndexToLocalCoor(idx, cbuf); | ||||||
| 	if ( cbuf[dim] == 0 ) {  // restricts loop to plane at lcoor[dim]==0 | 	if ( cbuf[dim] == 0 ) {  // restricts loop to plane at lcoor[dim]==0 | ||||||
|             FFTW_scalar *in = (FFTW_scalar *)&pgbuf._odata[idx]; | 	  FFTW_scalar *in = (FFTW_scalar *)&pgbuf_v[idx]; | ||||||
|             FFTW_scalar *out= (FFTW_scalar *)&pgbuf._odata[idx]; | 	  FFTW_scalar *out= (FFTW_scalar *)&pgbuf_v[idx]; | ||||||
| 	  FFTW<scalar>::fftw_execute_dft(p,in,out); | 	  FFTW<scalar>::fftw_execute_dft(p,in,out); | ||||||
| 	} | 	} | ||||||
|         } |     }); | ||||||
|       } |  | ||||||
|     timer.Stop(); |     timer.Stop(); | ||||||
|        |        | ||||||
|     // performance counting |     // performance counting | ||||||
| @@ -280,19 +270,18 @@ namespace Grid { | |||||||
|     flops+= flops_call*NN; |     flops+= flops_call*NN; | ||||||
|        |        | ||||||
|     // writing out result |     // writing out result | ||||||
|       PARALLEL_REGION |  | ||||||
|     { |     { | ||||||
|         std::vector<int> clbuf(Nd), cgbuf(Nd); |       autoView(pgbuf_v,pgbuf,CpuRead); | ||||||
|  |       autoView(result_v,result,CpuWrite); | ||||||
|  |       thread_for(idx,sgrid->lSites(),{ | ||||||
|  | 	Coordinate clbuf(Nd), cgbuf(Nd); | ||||||
| 	sobj s; | 	sobj s; | ||||||
|          |  | ||||||
|         PARALLEL_FOR_LOOP_INTERN |  | ||||||
|         for(int idx=0;idx<sgrid->lSites();idx++) { |  | ||||||
| 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | ||||||
| 	cgbuf = clbuf; | 	cgbuf = clbuf; | ||||||
| 	cgbuf[dim] = clbuf[dim]+L*pc; | 	cgbuf[dim] = clbuf[dim]+L*pc; | ||||||
|           peekLocalSite(s,pgbuf,cgbuf); | 	peekLocalSite(s,pgbuf_v,cgbuf); | ||||||
|           pokeLocalSite(s,result,clbuf); | 	pokeLocalSite(s,result_v,clbuf); | ||||||
|         } |       }); | ||||||
|     } |     } | ||||||
|     result = result*div; |     result = result*div; | ||||||
|        |        | ||||||
| @@ -301,6 +290,7 @@ namespace Grid { | |||||||
| #endif | #endif | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -26,16 +26,15 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef  GRID_ALGORITHM_LINEAR_OP_H | #pragma once  | ||||||
| #define  GRID_ALGORITHM_LINEAR_OP_H |  | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // LinearOperators Take a something and return a something. | // LinearOperators Take a something and return a something. | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // | // | ||||||
|   // Hopefully linearity is satisfied and the AdjOp is indeed the Hermitian conjugateugate (transpose if real): | // Hopefully linearity is satisfied and the AdjOp is indeed the Hermitian Conjugateugate (transpose if real): | ||||||
| //SBase | //SBase | ||||||
| //   i)  F(a x + b y) = aF(x) + b F(y). | //   i)  F(a x + b y) = aF(x) + b F(y). | ||||||
| //  ii)  <x|Op|y> = <y|AdjOp|x>^\ast | //  ii)  <x|Op|y> = <y|AdjOp|x>^\ast | ||||||
| @@ -44,10 +43,10 @@ namespace Grid { | |||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class Field> class LinearOperatorBase { | template<class Field> class LinearOperatorBase { | ||||||
| public: | public: | ||||||
|  |  | ||||||
|   // Support for coarsening to a multigrid |   // Support for coarsening to a multigrid | ||||||
|   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base |   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base | ||||||
|   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base |   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base | ||||||
|  |   virtual void OpDirAll  (const Field &in, std::vector<Field> &out) = 0; // Abstract base | ||||||
|  |  | ||||||
|   virtual void Op     (const Field &in, Field &out) = 0; // Abstract base |   virtual void Op     (const Field &in, Field &out) = 0; // Abstract base | ||||||
|   virtual void AdjOp  (const Field &in, Field &out) = 0; // Abstract base |   virtual void AdjOp  (const Field &in, Field &out) = 0; // Abstract base | ||||||
| @@ -84,6 +83,9 @@ namespace Grid { | |||||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { |   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||||
|     _Mat.Mdir(in,out,dir,disp); |     _Mat.Mdir(in,out,dir,disp); | ||||||
|   } |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     _Mat.MdirAll(in,out); | ||||||
|  |   }; | ||||||
|   void Op     (const Field &in, Field &out){ |   void Op     (const Field &in, Field &out){ | ||||||
|     _Mat.M(in,out); |     _Mat.M(in,out); | ||||||
|   } |   } | ||||||
| @@ -91,11 +93,13 @@ namespace Grid { | |||||||
|     _Mat.Mdag(in,out); |     _Mat.Mdag(in,out); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
| 	_Mat.MdagM(in,out,n1,n2); |     _Mat.MdagM(in,out); | ||||||
|  |     ComplexD dot = innerProduct(in,out); | ||||||
|  |     n1=real(dot); | ||||||
|  |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   void HermOp(const Field &in, Field &out){ |   void HermOp(const Field &in, Field &out){ | ||||||
| 	RealD n1,n2; |     _Mat.MdagM(in,out); | ||||||
| 	HermOpAndNorm(in,out,n1,n2); |  | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -117,6 +121,9 @@ namespace Grid { | |||||||
|     _Mat.Mdir(in,out,dir,disp); |     _Mat.Mdir(in,out,dir,disp); | ||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     assert(0); | ||||||
|  |   }; | ||||||
|   void Op     (const Field &in, Field &out){ |   void Op     (const Field &in, Field &out){ | ||||||
|     _Mat.M(in,out); |     _Mat.M(in,out); | ||||||
|     assert(0); |     assert(0); | ||||||
| @@ -126,17 +133,14 @@ namespace Grid { | |||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
| 	_Mat.MdagM(in,out,n1,n2); |     HermOp(in,out); | ||||||
| 	out = out + _shift*in; |     ComplexD dot = innerProduct(in,out); | ||||||
|  |  | ||||||
| 	ComplexD dot;	 |  | ||||||
| 	dot= innerProduct(in,out); |  | ||||||
|     n1=real(dot); |     n1=real(dot); | ||||||
|     n2=norm2(out); |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   void HermOp(const Field &in, Field &out){ |   void HermOp(const Field &in, Field &out){ | ||||||
| 	RealD n1,n2; |     _Mat.MdagM(in,out); | ||||||
| 	HermOpAndNorm(in,out,n1,n2); |     out = out + _shift*in; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -155,6 +159,9 @@ namespace Grid { | |||||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { |   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||||
|     _Mat.Mdir(in,out,dir,disp); |     _Mat.Mdir(in,out,dir,disp); | ||||||
|   } |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     _Mat.MdirAll(in,out); | ||||||
|  |   }; | ||||||
|   void Op     (const Field &in, Field &out){ |   void Op     (const Field &in, Field &out){ | ||||||
|     _Mat.M(in,out); |     _Mat.M(in,out); | ||||||
|   } |   } | ||||||
| @@ -162,8 +169,7 @@ namespace Grid { | |||||||
|     _Mat.M(in,out); |     _Mat.M(in,out); | ||||||
|   } |   } | ||||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
| 	_Mat.M(in,out); |     HermOp(in,out); | ||||||
| 	 |  | ||||||
|     ComplexD dot= innerProduct(in,out); n1=real(dot); |     ComplexD dot= innerProduct(in,out); n1=real(dot); | ||||||
|     n2=norm2(out); |     n2=norm2(out); | ||||||
|   } |   } | ||||||
| @@ -172,6 +178,35 @@ namespace Grid { | |||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class Matrix,class Field> | ||||||
|  | class NonHermitianLinearOperator : public LinearOperatorBase<Field> { | ||||||
|  |   Matrix &_Mat; | ||||||
|  | public: | ||||||
|  |   NonHermitianLinearOperator(Matrix &Mat): _Mat(Mat){}; | ||||||
|  |   // Support for coarsening to a multigrid | ||||||
|  |   void OpDiag (const Field &in, Field &out) { | ||||||
|  |     _Mat.Mdiag(in,out); | ||||||
|  |   } | ||||||
|  |   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||||
|  |     _Mat.Mdir(in,out,dir,disp); | ||||||
|  |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     _Mat.MdirAll(in,out); | ||||||
|  |   }; | ||||||
|  |   void Op     (const Field &in, Field &out){ | ||||||
|  |     _Mat.M(in,out); | ||||||
|  |   } | ||||||
|  |   void AdjOp     (const Field &in, Field &out){ | ||||||
|  |     _Mat.Mdag(in,out); | ||||||
|  |   } | ||||||
|  |   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void HermOp(const Field &in, Field &out){ | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
| // Even Odd Schur decomp operators; there are several | // Even Odd Schur decomp operators; there are several | ||||||
| // ways to introduce the even odd checkerboarding | // ways to introduce the even odd checkerboarding | ||||||
| @@ -180,21 +215,24 @@ namespace Grid { | |||||||
| template<class Field> | template<class Field> | ||||||
| class SchurOperatorBase :  public LinearOperatorBase<Field> { | class SchurOperatorBase :  public LinearOperatorBase<Field> { | ||||||
|  public: |  public: | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) =0; |   virtual  void Mpc      (const Field &in, Field &out) =0; | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out) =0; |   virtual  void MpcDag   (const Field &in, Field &out) =0; | ||||||
|       virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { |   virtual  void MpcDagMpc(const Field &in, Field &out) { | ||||||
|       Field tmp(in._grid); |     Field tmp(in.Grid()); | ||||||
|       tmp.checkerboard = in.checkerboard; |     tmp.Checkerboard() = in.Checkerboard(); | ||||||
| 	ni=Mpc(in,tmp); |     Mpc(in,tmp); | ||||||
| 	no=MpcDag(tmp,out); |     MpcDag(tmp,out); | ||||||
|   } |   } | ||||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
|       out.checkerboard = in.checkerboard; |     out.Checkerboard() = in.Checkerboard(); | ||||||
| 	MpcDagMpc(in,out,n1,n2); |     MpcDagMpc(in,out); | ||||||
|  |     ComplexD dot= innerProduct(in,out);  | ||||||
|  |     n1=real(dot); | ||||||
|  |     n2=norm2(out); | ||||||
|   } |   } | ||||||
|   virtual void HermOp(const Field &in, Field &out){ |   virtual void HermOp(const Field &in, Field &out){ | ||||||
| 	RealD n1,n2; |     out.Checkerboard() = in.Checkerboard(); | ||||||
| 	HermOpAndNorm(in,out,n1,n2); |     MpcDagMpc(in,out); | ||||||
|   } |   } | ||||||
|   void Op     (const Field &in, Field &out){ |   void Op     (const Field &in, Field &out){ | ||||||
|     Mpc(in,out); |     Mpc(in,out); | ||||||
| @@ -209,35 +247,33 @@ namespace Grid { | |||||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { |   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
|  |   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||||
|  |     assert(0); | ||||||
|  |   }; | ||||||
| }; | }; | ||||||
| template<class Matrix,class Field> | template<class Matrix,class Field> | ||||||
|   class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { |   class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { | ||||||
|     protected: |  | ||||||
|       Matrix &_Mat; |  | ||||||
|  public: |  public: | ||||||
|  |     Matrix &_Mat; | ||||||
|     SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; |     SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |     virtual  void Mpc      (const Field &in, Field &out) { | ||||||
|       Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
|       tmp.checkerboard = !in.checkerboard; |       tmp.Checkerboard() = !in.Checkerboard(); | ||||||
| 	//std::cout <<"grid pointers: in._grid="<< in._grid << " out._grid=" << out._grid << "  _Mat.Grid=" << _Mat.Grid() << " _Mat.RedBlackGrid=" << _Mat.RedBlackGrid() << std::endl; |  | ||||||
|        |        | ||||||
|       _Mat.Meooe(in,tmp); |       _Mat.Meooe(in,tmp); | ||||||
|       _Mat.MooeeInv(tmp,out); |       _Mat.MooeeInv(tmp,out); | ||||||
|       _Mat.Meooe(out,tmp); |       _Mat.Meooe(out,tmp); | ||||||
|  |  | ||||||
|       //std::cout << "cb in " << in.checkerboard << "  cb out " << out.checkerboard << std::endl; |  | ||||||
|       _Mat.Mooee(in,out); |       _Mat.Mooee(in,out); | ||||||
| 	return axpy_norm(out,-1.0,tmp,out); |       axpy(out,-1.0,tmp,out); | ||||||
|     } |     } | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |     virtual void MpcDag   (const Field &in, Field &out){ | ||||||
| 	Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
| 	 | 	 | ||||||
|       _Mat.MeooeDag(in,tmp); |       _Mat.MeooeDag(in,tmp); | ||||||
|       _Mat.MooeeInvDag(tmp,out); |       _Mat.MooeeInvDag(tmp,out); | ||||||
|       _Mat.MeooeDag(out,tmp); |       _Mat.MeooeDag(out,tmp); | ||||||
|  |  | ||||||
|       _Mat.MooeeDag(in,out); |       _Mat.MooeeDag(in,out); | ||||||
| 	return axpy_norm(out,-1.0,tmp,out); |       axpy(out,-1.0,tmp,out); | ||||||
|     } |     } | ||||||
| }; | }; | ||||||
| template<class Matrix,class Field> | template<class Matrix,class Field> | ||||||
| @@ -247,25 +283,23 @@ namespace Grid { | |||||||
|  public: |  public: | ||||||
|     SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; |     SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|      |      | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |     virtual void Mpc      (const Field &in, Field &out) { | ||||||
| 	Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
|  |  | ||||||
|       _Mat.Meooe(in,out); |       _Mat.Meooe(in,out); | ||||||
|       _Mat.MooeeInv(out,tmp); |       _Mat.MooeeInv(out,tmp); | ||||||
|       _Mat.Meooe(tmp,out); |       _Mat.Meooe(tmp,out); | ||||||
|       _Mat.MooeeInv(out,tmp); |       _Mat.MooeeInv(out,tmp); | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|     } |     } | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |     virtual void MpcDag   (const Field &in, Field &out){ | ||||||
| 	Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
|        |        | ||||||
|       _Mat.MooeeInvDag(in,out); |       _Mat.MooeeInvDag(in,out); | ||||||
|       _Mat.MeooeDag(out,tmp); |       _Mat.MeooeDag(out,tmp); | ||||||
|       _Mat.MooeeInvDag(tmp,out); |       _Mat.MooeeInvDag(tmp,out); | ||||||
|       _Mat.MeooeDag(out,tmp); |       _Mat.MeooeDag(out,tmp); | ||||||
|  |       axpy(out,-1.0,tmp,in); | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |  | ||||||
|     } |     } | ||||||
| }; | }; | ||||||
| template<class Matrix,class Field> | template<class Matrix,class Field> | ||||||
| @@ -275,30 +309,159 @@ namespace Grid { | |||||||
|  public: |  public: | ||||||
|     SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; |     SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; | ||||||
|      |      | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |     virtual void Mpc      (const Field &in, Field &out) { | ||||||
| 	Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
|        |        | ||||||
|       _Mat.MooeeInv(in,out); |       _Mat.MooeeInv(in,out); | ||||||
|       _Mat.Meooe(out,tmp); |       _Mat.Meooe(out,tmp); | ||||||
|       _Mat.MooeeInv(tmp,out); |       _Mat.MooeeInv(tmp,out); | ||||||
|       _Mat.Meooe(out,tmp); |       _Mat.Meooe(out,tmp); | ||||||
|        |        | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |       axpy(out,-1.0,tmp,in); | ||||||
|     } |     } | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |     virtual  void MpcDag   (const Field &in, Field &out){ | ||||||
| 	Field tmp(in._grid); |       Field tmp(in.Grid()); | ||||||
|  |  | ||||||
|       _Mat.MeooeDag(in,out); |       _Mat.MeooeDag(in,out); | ||||||
|       _Mat.MooeeInvDag(out,tmp); |       _Mat.MooeeInvDag(out,tmp); | ||||||
|       _Mat.MeooeDag(tmp,out); |       _Mat.MeooeDag(tmp,out); | ||||||
|       _Mat.MooeeInvDag(out,tmp); |       _Mat.MooeeInvDag(out,tmp); | ||||||
|  |  | ||||||
| 	return axpy_norm(out,-1.0,tmp,in); |       axpy(out,-1.0,tmp,in); | ||||||
|     } |     } | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class NonHermitianSchurOperatorBase :  public LinearOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  public: | ||||||
|  |   virtual void  Mpc      (const Field& in, Field& out) = 0; | ||||||
|  |   virtual void  MpcDag   (const Field& in, Field& out) = 0; | ||||||
|  |   virtual void  MpcDagMpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |     tmp.Checkerboard() = in.Checkerboard(); | ||||||
|  |     Mpc(in,tmp); | ||||||
|  |     MpcDag(tmp,out); | ||||||
|  |   } | ||||||
|  |   virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   virtual void HermOp(const Field& in, Field& out) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void Op(const Field& in, Field& out) { | ||||||
|  |     Mpc(in, out); | ||||||
|  |   } | ||||||
|  |   void AdjOp(const Field& in, Field& out) {  | ||||||
|  |     MpcDag(in, out); | ||||||
|  |   } | ||||||
|  |   // Support for coarsening to a multigrid | ||||||
|  |   void OpDiag(const Field& in, Field& out) { | ||||||
|  |     assert(0); // must coarsen the unpreconditioned system | ||||||
|  |   } | ||||||
|  |   void OpDir(const Field& in, Field& out, int dir, int disp) { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |   void OpDirAll(const Field& in, std::vector<Field>& out){ | ||||||
|  |     assert(0); | ||||||
|  |   }; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Matrix, class Field> | ||||||
|  | class NonHermitianSchurDiagMooeeOperator :  public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  public: | ||||||
|  |   Matrix& _Mat; | ||||||
|  |  NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){}; | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |     tmp.Checkerboard() = !in.Checkerboard(); | ||||||
|  |      | ||||||
|  |     _Mat.Meooe(in, tmp); | ||||||
|  |     _Mat.MooeeInv(tmp, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |      | ||||||
|  |     _Mat.Mooee(in, out); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, out); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MeooeDag(in, tmp); | ||||||
|  |     _Mat.MooeeInvDag(tmp, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  | 	   | ||||||
|  |     _Mat.MooeeDag(in, out); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, out); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |      | ||||||
|  | template<class Matrix,class Field> | ||||||
|  | class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  protected: | ||||||
|  |   Matrix &_Mat; | ||||||
|  |    | ||||||
|  |  public: | ||||||
|  |   NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){}; | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  | 	   | ||||||
|  |     _Mat.Meooe(in, out); | ||||||
|  |     _Mat.MooeeInv(out, tmp); | ||||||
|  |     _Mat.Meooe(tmp, out); | ||||||
|  |     _Mat.MooeeInv(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MooeeInvDag(in, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  |     _Mat.MooeeInvDag(tmp, out); | ||||||
|  |     _Mat.MeooeDag(out, tmp); | ||||||
|  |      | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Matrix, class Field> | ||||||
|  | class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field>  | ||||||
|  | { | ||||||
|  |  protected: | ||||||
|  |   Matrix& _Mat; | ||||||
|  |    | ||||||
|  |  public: | ||||||
|  |  NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){}; | ||||||
|  |  | ||||||
|  |   virtual void Mpc(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MooeeInv(in, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |     _Mat.MooeeInv(tmp, out); | ||||||
|  |     _Mat.Meooe(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  |   virtual void MpcDag(const Field& in, Field& out) { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |      | ||||||
|  |     _Mat.MeooeDag(in, out); | ||||||
|  |     _Mat.MooeeInvDag(out, tmp); | ||||||
|  |     _Mat.MeooeDag(tmp, out); | ||||||
|  |     _Mat.MooeeInvDag(out, tmp); | ||||||
|  |  | ||||||
|  |     axpy(out, -1.0, tmp, in); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | ||||||
|     // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo ) Moo^-1 phi=eta ; psi = Moo^-1 phi | // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | ||||||
| template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | ||||||
| @@ -311,61 +474,38 @@ namespace Grid { | |||||||
|   Matrix &_Mat; |   Matrix &_Mat; | ||||||
|   Field tmp; |   Field tmp; | ||||||
|   RealD mass; |   RealD mass; | ||||||
|       double tMpc; |  | ||||||
|       double tIP; |  | ||||||
|       double tMeo; |  | ||||||
|       double taxpby_norm; |  | ||||||
|       uint64_t ncall; |  | ||||||
|  public: |  public: | ||||||
|       void Report(void) |  | ||||||
|       { |  | ||||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.Mpc "<< tMpc/ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " HermOpAndNorm.IP  "<< tIP /ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " Mpc.MeoMoe        "<< tMeo/ncall<<" usec "<<std::endl; |  | ||||||
| 	std::cout << GridLogMessage << " Mpc.axpby_norm    "<< taxpby_norm/ncall<<" usec "<<std::endl; |  | ||||||
|       } |  | ||||||
|   SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  |   SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  | ||||||
|   {  |   {  | ||||||
|     assert( _Mat.isTrivialEE() ); |     assert( _Mat.isTrivialEE() ); | ||||||
|     mass = _Mat.Mass(); |     mass = _Mat.Mass(); | ||||||
| 	tMpc=0; |  | ||||||
| 	tIP =0; |  | ||||||
|         tMeo=0; |  | ||||||
|         taxpby_norm=0; |  | ||||||
| 	ncall=0; |  | ||||||
|   } |   } | ||||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ |   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||||
| 	ncall++; |     Mpc(in,out); | ||||||
| 	tMpc-=usecond(); |  | ||||||
| 	n2 = Mpc(in,out); |  | ||||||
| 	tMpc+=usecond(); |  | ||||||
| 	tIP-=usecond(); |  | ||||||
|     ComplexD dot= innerProduct(in,out); |     ComplexD dot= innerProduct(in,out); | ||||||
| 	tIP+=usecond(); |  | ||||||
|     n1 = real(dot); |     n1 = real(dot); | ||||||
|  |     n2 =0.0; | ||||||
|   } |   } | ||||||
|   virtual void HermOp(const Field &in, Field &out){ |   virtual void HermOp(const Field &in, Field &out){ | ||||||
| 	ncall++; |     Mpc(in,out); | ||||||
| 	tMpc-=usecond(); |     //    _Mat.Meooe(in,out); | ||||||
|  |     //    _Mat.Meooe(out,tmp); | ||||||
|  |     //    axpby(out,-1.0,mass*mass,tmp,in); | ||||||
|  |   } | ||||||
|  |   virtual  void Mpc      (const Field &in, Field &out)  | ||||||
|  |   { | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |     Field tmp2(in.Grid()); | ||||||
|  | 	 | ||||||
|  |     //    _Mat.Mooee(in,out); | ||||||
|  |     //    _Mat.Mooee(out,tmp); | ||||||
|  |  | ||||||
|     _Mat.Meooe(in,out); |     _Mat.Meooe(in,out); | ||||||
|     _Mat.Meooe(out,tmp); |     _Mat.Meooe(out,tmp); | ||||||
| 	tMpc+=usecond(); |  | ||||||
| 	taxpby_norm-=usecond(); |  | ||||||
|     axpby(out,-1.0,mass*mass,tmp,in); |     axpby(out,-1.0,mass*mass,tmp,in); | ||||||
| 	taxpby_norm+=usecond(); |  | ||||||
|   } |   } | ||||||
|       virtual  RealD Mpc      (const Field &in, Field &out) { |   virtual  void MpcDag   (const Field &in, Field &out){ | ||||||
| 	tMeo-=usecond(); |     Mpc(in,out); | ||||||
| 	_Mat.Meooe(in,out); |  | ||||||
| 	_Mat.Meooe(out,tmp); |  | ||||||
| 	tMeo+=usecond(); |  | ||||||
| 	taxpby_norm-=usecond(); |  | ||||||
| 	RealD nn=axpby_norm(out,-1.0,mass*mass,tmp,in); |  | ||||||
| 	taxpby_norm+=usecond(); |  | ||||||
| 	return nn; |  | ||||||
|       } |  | ||||||
|       virtual  RealD MpcDag   (const Field &in, Field &out){ |  | ||||||
| 	return Mpc(in,out); |  | ||||||
|   } |   } | ||||||
|   virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { |   virtual void MpcDagMpc(const Field &in, Field &out,RealD &ni,RealD &no) { | ||||||
|     assert(0);// Never need with staggered |     assert(0);// Never need with staggered | ||||||
| @@ -373,7 +513,6 @@ namespace Grid { | |||||||
| }; | }; | ||||||
| template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | ||||||
|  |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for functions of operators | // Base classes for functions of operators | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| @@ -465,13 +604,15 @@ namespace Grid { | |||||||
| private: | private: | ||||||
|   std::vector<RealD> Coeffs; |   std::vector<RealD> Coeffs; | ||||||
| public: | public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|   Polynomial(std::vector<RealD> &_Coeffs) : Coeffs(_Coeffs) { }; |   Polynomial(std::vector<RealD> &_Coeffs) : Coeffs(_Coeffs) { }; | ||||||
|  |  | ||||||
|   // Implement the required interface |   // Implement the required interface | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { |   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||||
|  |  | ||||||
|       Field AtoN(in._grid); |     Field AtoN(in.Grid()); | ||||||
|       Field Mtmp(in._grid); |     Field Mtmp(in.Grid()); | ||||||
|     AtoN = in; |     AtoN = in; | ||||||
|     out = AtoN*Coeffs[0]; |     out = AtoN*Coeffs[0]; | ||||||
|     for(int n=1;n<Coeffs.size();n++){ |     for(int n=1;n<Coeffs.size();n++){ | ||||||
| @@ -482,6 +623,4 @@ namespace Grid { | |||||||
|   }; |   }; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif |  | ||||||
|   | |||||||
| @@ -28,7 +28,7 @@ Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | |||||||
| #ifndef GRID_PRECONDITIONER_H | #ifndef GRID_PRECONDITIONER_H | ||||||
| #define GRID_PRECONDITIONER_H | #define GRID_PRECONDITIONER_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| template<class Field> class Preconditioner :  public LinearFunction<Field> {  | template<class Field> class Preconditioner :  public LinearFunction<Field> {  | ||||||
|   virtual void operator()(const Field &src, Field & psi)=0; |   virtual void operator()(const Field &src, Field & psi)=0; | ||||||
| @@ -42,5 +42,5 @@ namespace Grid { | |||||||
|   TrivialPrecon(void){}; |   TrivialPrecon(void){}; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #define  GRID_ALGORITHM_SPARSE_MATRIX_H | #define  GRID_ALGORITHM_SPARSE_MATRIX_H | ||||||
|  |  | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Interface defining what I expect of a general sparse matrix, such as a Fermion action | // Interface defining what I expect of a general sparse matrix, such as a Fermion action | ||||||
| @@ -38,15 +38,16 @@ namespace Grid { | |||||||
| public: | public: | ||||||
|   virtual GridBase *Grid(void) =0; |   virtual GridBase *Grid(void) =0; | ||||||
|   // Full checkerboar operations |   // Full checkerboar operations | ||||||
|       virtual RealD M    (const Field &in, Field &out)=0; |   virtual void  M    (const Field &in, Field &out)=0; | ||||||
|       virtual RealD Mdag (const Field &in, Field &out)=0; |   virtual void  Mdag (const Field &in, Field &out)=0; | ||||||
|       virtual void  MdagM(const Field &in, Field &out,RealD &ni,RealD &no) { |   virtual void  MdagM(const Field &in, Field &out) { | ||||||
| 	Field tmp (in._grid); |     Field tmp (in.Grid()); | ||||||
| 	ni=M(in,tmp); |     M(in,tmp); | ||||||
| 	no=Mdag(tmp,out); |     Mdag(tmp,out); | ||||||
|   } |   } | ||||||
|   virtual  void Mdiag    (const Field &in, Field &out)=0; |   virtual  void Mdiag    (const Field &in, Field &out)=0; | ||||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; |   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; | ||||||
|  |   virtual  void MdirAll  (const Field &in, std::vector<Field> &out)=0; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -60,7 +61,7 @@ namespace Grid { | |||||||
|   // Query the even even properties to make algorithmic decisions |   // Query the even even properties to make algorithmic decisions | ||||||
|   ////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////// | ||||||
|   virtual RealD  Mass(void)        { return 0.0; }; |   virtual RealD  Mass(void)        { return 0.0; }; | ||||||
|       virtual int    ConstEE(void)     { return 0; }; // Disable assumptions unless overridden |   virtual int    ConstEE(void)     { return 1; }; // Disable assumptions unless overridden | ||||||
|   virtual int    isTrivialEE(void) { return 0; }; // by a derived class that knows better |   virtual int    isTrivialEE(void) { return 0; }; // by a derived class that knows better | ||||||
|  |  | ||||||
|   // half checkerboard operaions |   // half checkerboard operaions | ||||||
| @@ -74,6 +75,6 @@ namespace Grid { | |||||||
|  |  | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -32,7 +32,7 @@ Author: Christoph Lehner <clehner@bnl.gov> | |||||||
|  |  | ||||||
| #include <Grid/algorithms/LinearOperator.h> | #include <Grid/algorithms/LinearOperator.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| struct ChebyParams : Serializable { | struct ChebyParams : Serializable { | ||||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(ChebyParams, |   GRID_SERIALIZABLE_CLASS_MEMBERS(ChebyParams, | ||||||
| @@ -47,6 +47,8 @@ struct ChebyParams : Serializable { | |||||||
| template<class Field> | template<class Field> | ||||||
| class Chebyshev : public OperatorFunction<Field> { | class Chebyshev : public OperatorFunction<Field> { | ||||||
| private: | private: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|   std::vector<RealD> Coeffs; |   std::vector<RealD> Coeffs; | ||||||
|   int order; |   int order; | ||||||
|   RealD hi; |   RealD hi; | ||||||
| @@ -55,7 +57,7 @@ struct ChebyParams : Serializable { | |||||||
| public: | public: | ||||||
|   void csv(std::ostream &out){ |   void csv(std::ostream &out){ | ||||||
|     RealD diff = hi-lo; |     RealD diff = hi-lo; | ||||||
|       RealD delta = (hi-lo)*1.0e-9; |     RealD delta = diff*1.0e-9; | ||||||
|     for (RealD x=lo; x<hi; x+=delta) { |     for (RealD x=lo; x<hi; x+=delta) { | ||||||
|       delta*=1.1; |       delta*=1.1; | ||||||
|       RealD f = approx(x); |       RealD f = approx(x); | ||||||
| @@ -93,6 +95,24 @@ struct ChebyParams : Serializable { | |||||||
|     Coeffs[order-1] = 1.; |     Coeffs[order-1] = 1.; | ||||||
|   }; |   }; | ||||||
|    |    | ||||||
|  |   // PB - more efficient low pass drops high modes above the low as 1/x uses all Chebyshev's. | ||||||
|  |   // Similar kick effect below the threshold as Lanczos filter approach | ||||||
|  |   void InitLowPass(RealD _lo,RealD _hi,int _order) | ||||||
|  |   { | ||||||
|  |     lo=_lo; | ||||||
|  |     hi=_hi; | ||||||
|  |     order=_order; | ||||||
|  |        | ||||||
|  |     if(order < 2) exit(-1); | ||||||
|  |     Coeffs.resize(order); | ||||||
|  |     for(int j=0;j<order;j++){ | ||||||
|  |       RealD k=(order-1.0); | ||||||
|  |       RealD s=std::cos( j*M_PI*(k+0.5)/order ); | ||||||
|  |       Coeffs[j] = s * 2.0/order; | ||||||
|  |     } | ||||||
|  |      | ||||||
|  |   }; | ||||||
|  |  | ||||||
|   void Init(RealD _lo,RealD _hi,int _order, RealD (* func)(RealD)) |   void Init(RealD _lo,RealD _hi,int _order, RealD (* func)(RealD)) | ||||||
|   { |   { | ||||||
|     lo=_lo; |     lo=_lo; | ||||||
| @@ -212,12 +232,10 @@ struct ChebyParams : Serializable { | |||||||
|   // Implement the required interface |   // Implement the required interface | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { |   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||||
|  |  | ||||||
|       GridBase *grid=in._grid; |     GridBase *grid=in.Grid(); | ||||||
|  |  | ||||||
|       // std::cout << "Chevyshef(): in._grid="<<in._grid<<std::endl; |  | ||||||
|       //std::cout <<" Linop.Grid()="<<Linop.Grid()<<"Linop.RedBlackGrid()="<<Linop.RedBlackGrid()<<std::endl; |  | ||||||
|  |  | ||||||
|     int vol=grid->gSites(); |     int vol=grid->gSites(); | ||||||
|  |     typedef typename Field::vector_type vector_type; | ||||||
|  |  | ||||||
|     Field T0(grid); T0 = in;   |     Field T0(grid); T0 = in;   | ||||||
|     Field T1(grid);  |     Field T1(grid);  | ||||||
| @@ -232,20 +250,34 @@ struct ChebyParams : Serializable { | |||||||
|     RealD xscale = 2.0/(hi-lo); |     RealD xscale = 2.0/(hi-lo); | ||||||
|     RealD mscale = -(hi+lo)/(hi-lo); |     RealD mscale = -(hi+lo)/(hi-lo); | ||||||
|     Linop.HermOp(T0,y); |     Linop.HermOp(T0,y); | ||||||
|       T1=y*xscale+in*mscale; |     axpby(T1,xscale,mscale,y,in); | ||||||
|  |  | ||||||
|     // sum = .5 c[0] T0 + c[1] T1 |     // sum = .5 c[0] T0 + c[1] T1 | ||||||
|       out = (0.5*Coeffs[0])*T0 + Coeffs[1]*T1; |     //    out = ()*T0 + Coeffs[1]*T1; | ||||||
|  |     axpby(out,0.5*Coeffs[0],Coeffs[1],T0,T1); | ||||||
|     for(int n=2;n<order;n++){ |     for(int n=2;n<order;n++){ | ||||||
|  |  | ||||||
|       Linop.HermOp(*Tn,y); |       Linop.HermOp(*Tn,y); | ||||||
|  | #if 0 | ||||||
| 	y=xscale*y+mscale*(*Tn); |       auto y_v = y.View(); | ||||||
|  |       auto Tn_v = Tn->View(); | ||||||
| 	*Tnp=2.0*y-(*Tnm); |       auto Tnp_v = Tnp->View(); | ||||||
|  |       auto Tnm_v = Tnm->View(); | ||||||
| 	out=out+Coeffs[n]* (*Tnp); |       constexpr int Nsimd = vector_type::Nsimd(); | ||||||
|  |       accelerator_forNB(ss, in.Grid()->oSites(), Nsimd, { | ||||||
|  | 	  coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss)); | ||||||
|  | 	  coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss)); | ||||||
|  |       }); | ||||||
|  |       if ( Coeffs[n] != 0.0) { | ||||||
|  | 	axpy(out,Coeffs[n],*Tnp,out); | ||||||
|  |       } | ||||||
|  | #else | ||||||
|  |       axpby(y,xscale,mscale,y,(*Tn)); | ||||||
|  |       axpby(*Tnp,2.0,-1.0,y,(*Tnm)); | ||||||
|  |       if ( Coeffs[n] != 0.0) { | ||||||
|  | 	axpy(out,Coeffs[n],*Tnp,out); | ||||||
|  |       } | ||||||
|  | #endif | ||||||
|       // Cycle pointers to avoid copies |       // Cycle pointers to avoid copies | ||||||
|       Field *swizzle = Tnm; |       Field *swizzle = Tnm; | ||||||
|       Tnm    =Tn; |       Tnm    =Tn; | ||||||
| @@ -321,7 +353,7 @@ struct ChebyParams : Serializable { | |||||||
|   // shift_Multiply in Rudy's code |   // shift_Multiply in Rudy's code | ||||||
|   void AminusMuSq(LinearOperatorBase<Field> &Linop, const Field &in, Field &out)  |   void AminusMuSq(LinearOperatorBase<Field> &Linop, const Field &in, Field &out)  | ||||||
|   { |   { | ||||||
|       GridBase *grid=in._grid; |     GridBase *grid=in.Grid(); | ||||||
|     Field tmp(grid); |     Field tmp(grid); | ||||||
|  |  | ||||||
|     RealD aa= alpha*alpha; |     RealD aa= alpha*alpha; | ||||||
| @@ -338,7 +370,7 @@ struct ChebyParams : Serializable { | |||||||
|   // Implement the required interface |   // Implement the required interface | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { |   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||||
|  |  | ||||||
|       GridBase *grid=in._grid; |     GridBase *grid=in.Grid(); | ||||||
|  |  | ||||||
|     int vol=grid->gSites(); |     int vol=grid->gSites(); | ||||||
|  |  | ||||||
| @@ -373,5 +405,5 @@ struct ChebyParams : Serializable { | |||||||
|     } |     } | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -31,7 +31,7 @@ See the full license in the file "LICENSE" in the top level distribution directo | |||||||
| #ifndef INCLUDED_FORECAST_H | #ifndef INCLUDED_FORECAST_H | ||||||
| #define INCLUDED_FORECAST_H | #define INCLUDED_FORECAST_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| // Abstract base class. | // Abstract base class. | ||||||
| // Takes a matrix (Mat), a source (phi), and a vector of Fields (chi) | // Takes a matrix (Mat), a source (phi), and a vector of Fields (chi) | ||||||
| @@ -57,10 +57,10 @@ namespace Grid { | |||||||
|     Field chi(phi); // forecasted solution |     Field chi(phi); // forecasted solution | ||||||
|  |  | ||||||
|     // Trivial cases |     // Trivial cases | ||||||
|         if(degree == 0){ chi = zero; return chi; } |     if(degree == 0){ chi = Zero(); return chi; } | ||||||
|     else if(degree == 1){ return prev_solns[0]; } |     else if(degree == 1){ return prev_solns[0]; } | ||||||
|  |  | ||||||
|         RealD dot; |     //    RealD dot; | ||||||
|     ComplexD xp; |     ComplexD xp; | ||||||
|     Field r(phi); // residual |     Field r(phi); // residual | ||||||
|     Field Mv(phi); |     Field Mv(phi); | ||||||
| @@ -92,7 +92,7 @@ namespace Grid { | |||||||
|     for(int j=0; j<degree; j++){ |     for(int j=0; j<degree; j++){ | ||||||
|       for(int k=j+1; k<degree; k++){ |       for(int k=j+1; k<degree; k++){ | ||||||
| 	G[j][k] = innerProduct(v[j],MdagMv[k]); | 	G[j][k] = innerProduct(v[j],MdagMv[k]); | ||||||
|           G[k][j] = std::conj(G[j][k]); | 	G[k][j] = conjugate(G[j][k]); | ||||||
|       }} |       }} | ||||||
|  |  | ||||||
|     // Gauss-Jordan elimination with partial pivoting |     // Gauss-Jordan elimination with partial pivoting | ||||||
| @@ -100,7 +100,7 @@ namespace Grid { | |||||||
|  |  | ||||||
|       // Perform partial pivoting |       // Perform partial pivoting | ||||||
|       int k = i; |       int k = i; | ||||||
|           for(int j=i+1; j<degree; j++){ if(std::abs(G[j][j]) > std::abs(G[k][k])){ k = j; } } |       for(int j=i+1; j<degree; j++){ if(abs(G[j][j]) > abs(G[k][k])){ k = j; } } | ||||||
|       if(k != i){ |       if(k != i){ | ||||||
| 	xp = b[k]; | 	xp = b[k]; | ||||||
| 	b[k] = b[i]; | 	b[k] = b[i]; | ||||||
| @@ -121,7 +121,7 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|  |  | ||||||
|     // Use Gaussian elimination to solve equations and calculate initial guess |     // Use Gaussian elimination to solve equations and calculate initial guess | ||||||
|         chi = zero; |     chi = Zero(); | ||||||
|     r = phi; |     r = phi; | ||||||
|     for(int i=degree-1; i>=0; i--){ |     for(int i=degree-1; i>=0; i--){ | ||||||
|       a[i] = 0.0; |       a[i] = 0.0; | ||||||
| @@ -136,7 +136,7 @@ namespace Grid { | |||||||
|     for(int i=0; i<degree; i++){ |     for(int i=0; i<degree; i++){ | ||||||
|       tmp = -b[i]; |       tmp = -b[i]; | ||||||
|       for(int j=0; j<degree; j++){ tmp += G[i][j]*a[j]; } |       for(int j=0; j<degree; j++){ tmp += G[i][j]*a[j]; } | ||||||
|           tmp = std::conj(tmp)*tmp; |       tmp = conjugate(tmp)*tmp; | ||||||
|       true_r += std::sqrt(tmp.real()); |       true_r += std::sqrt(tmp.real()); | ||||||
|     } |     } | ||||||
|  |  | ||||||
| @@ -147,6 +147,6 @@ namespace Grid { | |||||||
|   }; |   }; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										129
									
								
								Grid/algorithms/approx/JacobiPolynomial.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										129
									
								
								Grid/algorithms/approx/JacobiPolynomial.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,129 @@ | |||||||
|  | #ifndef GRID_JACOBIPOLYNOMIAL_H | ||||||
|  | #define GRID_JACOBIPOLYNOMIAL_H | ||||||
|  |  | ||||||
|  | #include <Grid/algorithms/LinearOperator.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class JacobiPolynomial : public OperatorFunction<Field> { | ||||||
|  |  private: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   int order; | ||||||
|  |   RealD hi; | ||||||
|  |   RealD lo; | ||||||
|  |   RealD alpha; | ||||||
|  |   RealD beta; | ||||||
|  |  | ||||||
|  |  public: | ||||||
|  |   void csv(std::ostream &out){ | ||||||
|  |     csv(out,lo,hi); | ||||||
|  |   } | ||||||
|  |   void csv(std::ostream &out,RealD llo,RealD hhi){ | ||||||
|  |     RealD diff = hhi-llo; | ||||||
|  |     RealD delta = diff*1.0e-5; | ||||||
|  |     for (RealD x=llo-delta; x<=hhi; x+=delta) { | ||||||
|  |       RealD f = approx(x); | ||||||
|  |       out<< x<<" "<<f <<std::endl; | ||||||
|  |     } | ||||||
|  |     return; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   JacobiPolynomial(){}; | ||||||
|  |   JacobiPolynomial(RealD _lo,RealD _hi,int _order,RealD _alpha, RealD _beta) | ||||||
|  |   { | ||||||
|  |       lo=_lo; | ||||||
|  |       hi=_hi; | ||||||
|  |       alpha=_alpha; | ||||||
|  |       beta=_beta; | ||||||
|  |       order=_order; | ||||||
|  |   }; | ||||||
|  |  | ||||||
|  |   RealD approx(RealD x) // Convenience for plotting the approximation                                                        | ||||||
|  |   { | ||||||
|  |     RealD Tn; | ||||||
|  |     RealD Tnm; | ||||||
|  |     RealD Tnp; | ||||||
|  |  | ||||||
|  |     RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo)); | ||||||
|  |  | ||||||
|  |     RealD T0=1.0; | ||||||
|  |     RealD T1=(alpha-beta)*0.5+(alpha+beta+2.0)*0.5*y; | ||||||
|  |  | ||||||
|  |     Tn =T1; | ||||||
|  |     Tnm=T0; | ||||||
|  |     for(int n=2;n<=order;n++){ | ||||||
|  |       RealD cnp = 2.0*n*(n+alpha+beta)*(2.0*n-2.0+alpha+beta); | ||||||
|  |       RealD cny = (2.0*n-2.0+alpha+beta)*(2.0*n-1.0+alpha+beta)*(2.0*n+alpha+beta); | ||||||
|  |       RealD cn1 = (2.0*n+alpha+beta-1.0)*(alpha*alpha-beta*beta); | ||||||
|  |       RealD cnm = - 2.0*(n+alpha-1.0)*(n+beta-1.0)*(2.0*n+alpha+beta); | ||||||
|  |       Tnp= ( cny * y *Tn + cn1 * Tn + cnm * Tnm )/ cnp; | ||||||
|  |       Tnm=Tn; | ||||||
|  |       Tn =Tnp; | ||||||
|  |     } | ||||||
|  |     return Tnp; | ||||||
|  |   }; | ||||||
|  |  | ||||||
|  |   // Implement the required interface                                                                                        | ||||||
|  |   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||||
|  |     GridBase *grid=in.Grid(); | ||||||
|  |  | ||||||
|  |     int vol=grid->gSites(); | ||||||
|  |  | ||||||
|  |     Field T0(grid); | ||||||
|  |     Field T1(grid); | ||||||
|  |     Field T2(grid); | ||||||
|  |     Field y(grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |     Field *Tnm = &T0; | ||||||
|  |     Field *Tn  = &T1; | ||||||
|  |     Field *Tnp = &T2; | ||||||
|  |  | ||||||
|  |     //    RealD T0=1.0;                                                                                                      | ||||||
|  |     T0=in; | ||||||
|  |  | ||||||
|  |     //    RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo));                                                                            | ||||||
|  |     //           = x * 2/(hi-lo) - (hi+lo)/(hi-lo)                                                                           | ||||||
|  |     Linop.HermOp(T0,y); | ||||||
|  |     RealD xscale = 2.0/(hi-lo); | ||||||
|  |     RealD mscale = -(hi+lo)/(hi-lo); | ||||||
|  |     Linop.HermOp(T0,y); | ||||||
|  |     y=y*xscale+in*mscale; | ||||||
|  |  | ||||||
|  |     // RealD T1=(alpha-beta)*0.5+(alpha+beta+2.0)*0.5*y; | ||||||
|  |     RealD halfAmB  = (alpha-beta)*0.5; | ||||||
|  |     RealD halfApBp2= (alpha+beta+2.0)*0.5; | ||||||
|  |     T1 = halfAmB * in + halfApBp2*y; | ||||||
|  |  | ||||||
|  |     for(int n=2;n<=order;n++){ | ||||||
|  |  | ||||||
|  |       Linop.HermOp(*Tn,y); | ||||||
|  |       y=xscale*y+mscale*(*Tn); | ||||||
|  |  | ||||||
|  |       RealD cnp = 2.0*n*(n+alpha+beta)*(2.0*n-2.0+alpha+beta); | ||||||
|  |       RealD cny = (2.0*n-2.0+alpha+beta)*(2.0*n-1.0+alpha+beta)*(2.0*n+alpha+beta); | ||||||
|  |       RealD cn1 = (2.0*n+alpha+beta-1.0)*(alpha*alpha-beta*beta); | ||||||
|  |       RealD cnm = - 2.0*(n+alpha-1.0)*(n+beta-1.0)*(2.0*n+alpha+beta); | ||||||
|  |  | ||||||
|  |       //      Tnp= ( cny * y *Tn + cn1 * Tn + cnm * Tnm )/ cnp;                                                              | ||||||
|  |       cny=cny/cnp; | ||||||
|  |       cn1=cn1/cnp; | ||||||
|  |       cn1=cn1/cnp; | ||||||
|  |       cnm=cnm/cnp; | ||||||
|  |  | ||||||
|  |       *Tnp=cny*y + cn1 *(*Tn) + cnm * (*Tnm); | ||||||
|  |  | ||||||
|  |       // Cycle pointers to avoid copies                                                                                      | ||||||
|  |       Field *swizzle = Tnm; | ||||||
|  |       Tnm    =Tn; | ||||||
|  |       Tn     =Tnp; | ||||||
|  |       Tnp    =swizzle; | ||||||
|  |     } | ||||||
|  |     out=*Tnp; | ||||||
|  |  | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  | #endif | ||||||
| @@ -27,7 +27,8 @@ Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | |||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| double MultiShiftFunction::approx(double x) | double MultiShiftFunction::approx(double x) | ||||||
| { | { | ||||||
|   double a = norm; |   double a = norm; | ||||||
| @@ -53,4 +54,4 @@ void MultiShiftFunction::csv(std::ostream &out) | |||||||
|   } |   } | ||||||
|   return; |   return; | ||||||
| } | } | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|   | |||||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef MULTI_SHIFT_FUNCTION | #ifndef MULTI_SHIFT_FUNCTION | ||||||
| #define MULTI_SHIFT_FUNCTION | #define MULTI_SHIFT_FUNCTION | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| class MultiShiftFunction { | class MultiShiftFunction { | ||||||
| public: | public: | ||||||
| @@ -63,5 +63,5 @@ public: | |||||||
|   } |   } | ||||||
|  |  | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -298,7 +298,7 @@ void AlgRemez::stpini(bigfloat *step) { | |||||||
| // Search for error maxima and minima | // Search for error maxima and minima | ||||||
| void AlgRemez::search(bigfloat *step) { | void AlgRemez::search(bigfloat *step) { | ||||||
|   bigfloat a, q, xm, ym, xn, yn, xx0, xx1; |   bigfloat a, q, xm, ym, xn, yn, xx0, xx1; | ||||||
|   int i, j, meq, emsign, ensign, steps; |   int i, meq, emsign, ensign, steps; | ||||||
|  |  | ||||||
|   meq = neq + 1; |   meq = neq + 1; | ||||||
|   bigfloat *yy = new bigfloat[meq]; |   bigfloat *yy = new bigfloat[meq]; | ||||||
| @@ -306,7 +306,6 @@ void AlgRemez::search(bigfloat *step) { | |||||||
|   bigfloat eclose = 1.0e30; |   bigfloat eclose = 1.0e30; | ||||||
|   bigfloat farther = 0l; |   bigfloat farther = 0l; | ||||||
|  |  | ||||||
|   j = 1; |  | ||||||
|   xx0 = apstrt; |   xx0 = apstrt; | ||||||
|  |  | ||||||
|   for (i = 0; i < meq; i++) { |   for (i = 0; i < meq; i++) { | ||||||
|   | |||||||
							
								
								
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,473 @@ | |||||||
|  | #include<math.h> | ||||||
|  | #include<stdio.h> | ||||||
|  | #include<stdlib.h> | ||||||
|  | #include<string> | ||||||
|  | #include<iostream> | ||||||
|  | #include<iomanip> | ||||||
|  | #include<cassert> | ||||||
|  |  | ||||||
|  | #include<Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Constructor | ||||||
|  | AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision, | ||||||
|  | 				 bigfloat (*f)(bigfloat x, void *data), void *data): f(f),  | ||||||
|  | 										     data(data),  | ||||||
|  | 										     prec(precision), | ||||||
|  | 										     apstrt(lower), apend(upper), apwidt(upper - lower), | ||||||
|  | 										     n(0), d(0), pow_n(0), pow_d(0) | ||||||
|  | { | ||||||
|  |   bigfloat::setDefaultPrecision(prec); | ||||||
|  |  | ||||||
|  |   std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n"; | ||||||
|  |   std::cout<<"Precision of arithmetic is "<<precision<<std::endl; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Determine the properties of the numerator and denominator polynomials | ||||||
|  | void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){ | ||||||
|  |   pow_n = num_degree; | ||||||
|  |   pow_d = den_degree; | ||||||
|  |  | ||||||
|  |   if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0); | ||||||
|  |   if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0); | ||||||
|  |  | ||||||
|  |   if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0); | ||||||
|  |   if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0); | ||||||
|  |  | ||||||
|  |   num_type = num_type_in; | ||||||
|  |   den_type = den_type_in; | ||||||
|  |  | ||||||
|  |   num_pows.resize(pow_n+1); | ||||||
|  |   den_pows.resize(pow_d+1); | ||||||
|  |  | ||||||
|  |   int n_in = 0; | ||||||
|  |   bool odd = num_type == PolyType::Full || num_type == PolyType::Odd; | ||||||
|  |   bool even = num_type == PolyType::Full || num_type == PolyType::Even; | ||||||
|  |   for(int i=0;i<=pow_n;i++){ | ||||||
|  |     num_pows[i] = -1; | ||||||
|  |     if(i % 2 == 0 && even) num_pows[i] = n_in++; | ||||||
|  |     if(i % 2 == 1 && odd) num_pows[i] = n_in++; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   std::cout << n_in << " terms in numerator" << std::endl; | ||||||
|  |   --n_in; //power is 1 less than the number of terms, eg  pow=1   a x^1  + b x^0 | ||||||
|  |  | ||||||
|  |   int d_in = 0; | ||||||
|  |   odd = den_type == PolyType::Full || den_type == PolyType::Odd; | ||||||
|  |   even = den_type == PolyType::Full || den_type == PolyType::Even; | ||||||
|  |   for(int i=0;i<=pow_d;i++){ | ||||||
|  |     den_pows[i] = -1; | ||||||
|  |     if(i % 2 == 0 && even) den_pows[i] = d_in++; | ||||||
|  |     if(i % 2 == 1 && odd) den_pows[i] = d_in++; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   std::cout << d_in << " terms in denominator" << std::endl; | ||||||
|  |   --d_in; | ||||||
|  |  | ||||||
|  |   n = n_in; | ||||||
|  |   d = d_in; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Setup algorithm | ||||||
|  | void AlgRemezGeneral::reinitializeAlgorithm(){ | ||||||
|  |   spread = 1.0e37; | ||||||
|  |   iter = 0; | ||||||
|  |  | ||||||
|  |   neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1 | ||||||
|  |  | ||||||
|  |   param.resize(neq); | ||||||
|  |   yy.resize(neq+1); | ||||||
|  |  | ||||||
|  |   //Initialize linear equation temporaries | ||||||
|  |   A.resize(neq*neq); | ||||||
|  |   B.resize(neq); | ||||||
|  |   IPS.resize(neq); | ||||||
|  |  | ||||||
|  |   //Initialize maximum and minimum errors | ||||||
|  |   xx.resize(neq+2); | ||||||
|  |   mm.resize(neq+1); | ||||||
|  |   initialGuess(); | ||||||
|  |  | ||||||
|  |   //Initialize search steps | ||||||
|  |   step.resize(neq+1); | ||||||
|  |   stpini(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree,  | ||||||
|  | 				       const PolyType num_type_in, const PolyType den_type_in,  | ||||||
|  | 				       const double _tolerance, const int report_freq){ | ||||||
|  |   //Setup the properties of the polynomial | ||||||
|  |   setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in); | ||||||
|  |  | ||||||
|  |   //Setup the algorithm | ||||||
|  |   reinitializeAlgorithm(); | ||||||
|  |  | ||||||
|  |   bigfloat tolerance = _tolerance; | ||||||
|  |  | ||||||
|  |   //Iterate until convergance | ||||||
|  |   while (spread > tolerance) {  | ||||||
|  |     if (iter++ % report_freq==0) | ||||||
|  |       std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl;  | ||||||
|  |  | ||||||
|  |     equations(); | ||||||
|  |     if (delta < tolerance) { | ||||||
|  |       std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n"; | ||||||
|  |       assert(0); | ||||||
|  |     };     | ||||||
|  |     assert( delta>= tolerance ); | ||||||
|  |  | ||||||
|  |     search(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int sign; | ||||||
|  |   double error = (double)getErr(mm[0],&sign); | ||||||
|  |   std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl; | ||||||
|  |  | ||||||
|  |   // Return the maximum error in the approximation | ||||||
|  |   return error; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Initial values of maximal and minimal errors | ||||||
|  | void AlgRemezGeneral::initialGuess(){ | ||||||
|  |   // Supply initial guesses for solution points | ||||||
|  |   long ncheb = neq;			// Degree of Chebyshev error estimate | ||||||
|  |  | ||||||
|  |   // Find ncheb+1 extrema of Chebyshev polynomial | ||||||
|  |   bigfloat a = ncheb; | ||||||
|  |   bigfloat r; | ||||||
|  |  | ||||||
|  |   mm[0] = apstrt; | ||||||
|  |   for (long i = 1; i < ncheb; i++) { | ||||||
|  |     r = 0.5 * (1 - cos((M_PI * i)/(double) a)); | ||||||
|  |     //r *= sqrt_bf(r); | ||||||
|  |     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||||
|  |     mm[i] = apstrt + r * apwidt; | ||||||
|  |   } | ||||||
|  |   mm[ncheb] = apend; | ||||||
|  |  | ||||||
|  |   a = 2.0 * ncheb; | ||||||
|  |   for (long i = 0; i <= ncheb; i++) { | ||||||
|  |     r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a)); | ||||||
|  |     //r *= sqrt_bf(r); // Squeeze to low end of interval | ||||||
|  |     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||||
|  |     xx[i] = apstrt + r * apwidt; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Initialise step sizes | ||||||
|  | void AlgRemezGeneral::stpini(){ | ||||||
|  |   xx[neq+1] = apend; | ||||||
|  |   delta = 0.25; | ||||||
|  |   step[0] = xx[0] - apstrt; | ||||||
|  |   for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1]; | ||||||
|  |   step[neq] = step[neq-1]; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Search for error maxima and minima | ||||||
|  | void AlgRemezGeneral::search(){ | ||||||
|  |   bigfloat a, q, xm, ym, xn, yn, xx1; | ||||||
|  |   int emsign, ensign, steps; | ||||||
|  |  | ||||||
|  |   int meq = neq + 1; | ||||||
|  |  | ||||||
|  |   bigfloat eclose = 1.0e30; | ||||||
|  |   bigfloat farther = 0l; | ||||||
|  |  | ||||||
|  |   bigfloat xx0 = apstrt; | ||||||
|  |  | ||||||
|  |   for (int i = 0; i < meq; i++) { | ||||||
|  |     steps = 0; | ||||||
|  |     xx1 = xx[i]; // Next zero | ||||||
|  |     if (i == meq-1) xx1 = apend; | ||||||
|  |     xm = mm[i]; | ||||||
|  |     ym = getErr(xm,&emsign); | ||||||
|  |     q = step[i]; | ||||||
|  |     xn = xm + q; | ||||||
|  |     if (xn < xx0 || xn >= xx1) {	// Cannot skip over adjacent boundaries | ||||||
|  |       q = -q; | ||||||
|  |       xn = xm; | ||||||
|  |       yn = ym; | ||||||
|  |       ensign = emsign; | ||||||
|  |     } else { | ||||||
|  |       yn = getErr(xn,&ensign); | ||||||
|  |       if (yn < ym) { | ||||||
|  | 	q = -q; | ||||||
|  | 	xn = xm; | ||||||
|  | 	yn = ym; | ||||||
|  | 	ensign = emsign; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |    | ||||||
|  |     while(yn >= ym) {		// March until error becomes smaller. | ||||||
|  |       if (++steps > 10) | ||||||
|  |       	break; | ||||||
|  |        | ||||||
|  |       ym = yn; | ||||||
|  |       xm = xn; | ||||||
|  |       emsign = ensign; | ||||||
|  |       a = xm + q; | ||||||
|  |       if (a == xm || a <= xx0 || a >= xx1) | ||||||
|  | 	break;// Must not skip over the zeros either side.       | ||||||
|  |  | ||||||
|  |       xn = a; | ||||||
|  |       yn = getErr(xn,&ensign); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     mm[i] = xm;			// Position of maximum | ||||||
|  |     yy[i] = ym;			// Value of maximum | ||||||
|  |  | ||||||
|  |     if (eclose > ym) eclose = ym; | ||||||
|  |     if (farther < ym) farther = ym; | ||||||
|  |  | ||||||
|  |     xx0 = xx1; // Walk to next zero. | ||||||
|  |   } // end of search loop | ||||||
|  |  | ||||||
|  |   q = (farther - eclose);	// Decrease step size if error spread increased | ||||||
|  |  | ||||||
|  |   if (eclose != 0.0) q /= eclose; // Relative error spread | ||||||
|  |  | ||||||
|  |   if (q >= spread) | ||||||
|  |     delta *= 0.5; // Spread is increasing; decrease step size | ||||||
|  |    | ||||||
|  |   spread = q; | ||||||
|  |  | ||||||
|  |   for (int i = 0; i < neq; i++) { | ||||||
|  |     q = yy[i+1]; | ||||||
|  |     if (q != 0.0) q = yy[i] / q  - (bigfloat)1l; | ||||||
|  |     else q = 0.0625; | ||||||
|  |     if (q > (bigfloat)0.25) q = 0.25; | ||||||
|  |     q *= mm[i+1] - mm[i]; | ||||||
|  |     step[i] = q * delta; | ||||||
|  |   } | ||||||
|  |   step[neq] = step[neq-1]; | ||||||
|  |    | ||||||
|  |   for (int i = 0; i < neq; i++) {	// Insert new locations for the zeros. | ||||||
|  |     xm = xx[i] - step[i]; | ||||||
|  |  | ||||||
|  |     if (xm <= apstrt) | ||||||
|  |       continue; | ||||||
|  |  | ||||||
|  |     if (xm >= apend) | ||||||
|  |       continue; | ||||||
|  |  | ||||||
|  |     if (xm <= mm[i]) | ||||||
|  |       xm = (bigfloat)0.5 * (mm[i] + xx[i]);     | ||||||
|  |  | ||||||
|  |     if (xm >= mm[i+1]) | ||||||
|  |       xm = (bigfloat)0.5 * (mm[i+1] + xx[i]); | ||||||
|  |      | ||||||
|  |     xx[i] = xm; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Solve the equations | ||||||
|  | void AlgRemezGeneral::equations(){ | ||||||
|  |   bigfloat x, y, z; | ||||||
|  |   bigfloat *aa; | ||||||
|  |    | ||||||
|  |   for (int i = 0; i < neq; i++) {	// set up the equations for solution by simq() | ||||||
|  |     int ip = neq * i;		// offset to 1st element of this row of matrix | ||||||
|  |     x = xx[i];			// the guess for this row | ||||||
|  |     y = func(x);		// right-hand-side vector | ||||||
|  |  | ||||||
|  |     z = (bigfloat)1l; | ||||||
|  |     aa = A.data()+ip; | ||||||
|  |     int t = 0; | ||||||
|  |     for (int j = 0; j <= pow_n; j++) { | ||||||
|  |       if(num_pows[j] != -1){ *aa++ = z; t++; } | ||||||
|  |       z *= x; | ||||||
|  |     } | ||||||
|  |     assert(t == n+1); | ||||||
|  |  | ||||||
|  |     z = (bigfloat)1l; | ||||||
|  |     t = 0; | ||||||
|  |     for (int j = 0; j < pow_d; j++) { | ||||||
|  |       if(den_pows[j] != -1){ *aa++ = -y * z; t++; } | ||||||
|  |       z *= x; | ||||||
|  |     } | ||||||
|  |     assert(t == d); | ||||||
|  |  | ||||||
|  |     B[i] = y * z;		// Right hand side vector | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Solve the simultaneous linear equations. | ||||||
|  |   if (simq()){ | ||||||
|  |     std::cout<<"simq failed\n"; | ||||||
|  |     exit(0); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // Evaluate the rational form P(x)/Q(x) using coefficients | ||||||
|  | // from the solution vector param | ||||||
|  | bigfloat AlgRemezGeneral::approx(const bigfloat x) const{ | ||||||
|  |   // Work backwards toward the constant term. | ||||||
|  |   int c = n; | ||||||
|  |   bigfloat yn = param[c--];		// Highest order numerator coefficient | ||||||
|  |   for (int i = pow_n-1; i >= 0; i--) yn = x * yn  +  (num_pows[i] != -1 ? param[c--] : bigfloat(0l));   | ||||||
|  |  | ||||||
|  |   c = n+d; | ||||||
|  |   bigfloat yd = 1l; //Highest degree coefficient is 1.0 | ||||||
|  |   for (int i = pow_d-1; i >= 0; i--) yd = x * yd  +  (den_pows[i] != -1 ? param[c--] : bigfloat(0l));  | ||||||
|  |  | ||||||
|  |   return(yn/yd); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Compute size and sign of the approximation error at x | ||||||
|  | bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{ | ||||||
|  |   bigfloat f = func(x); | ||||||
|  |   bigfloat e = approx(x) - f; | ||||||
|  |   if (f != 0) e /= f; | ||||||
|  |   if (e < (bigfloat)0.0) { | ||||||
|  |     *sign = -1; | ||||||
|  |     e = -e; | ||||||
|  |   } | ||||||
|  |   else *sign = 1; | ||||||
|  |    | ||||||
|  |   return(e); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Solve the system AX=B | ||||||
|  | int AlgRemezGeneral::simq(){ | ||||||
|  |  | ||||||
|  |   int ip, ipj, ipk, ipn; | ||||||
|  |   int idxpiv; | ||||||
|  |   int kp, kp1, kpk, kpn; | ||||||
|  |   int nip, nkp; | ||||||
|  |   bigfloat em, q, rownrm, big, size, pivot, sum; | ||||||
|  |   bigfloat *aa; | ||||||
|  |   bigfloat *X = param.data(); | ||||||
|  |  | ||||||
|  |   int n = neq; | ||||||
|  |   int nm1 = n - 1; | ||||||
|  |   // Initialize IPS and X | ||||||
|  |    | ||||||
|  |   int ij = 0; | ||||||
|  |   for (int i = 0; i < n; i++) { | ||||||
|  |     IPS[i] = i; | ||||||
|  |     rownrm = 0.0; | ||||||
|  |     for(int j = 0; j < n; j++) { | ||||||
|  |       q = abs_bf(A[ij]); | ||||||
|  |       if(rownrm < q) rownrm = q; | ||||||
|  |       ++ij; | ||||||
|  |     } | ||||||
|  |     if (rownrm == (bigfloat)0l) { | ||||||
|  |       std::cout<<"simq rownrm=0\n"; | ||||||
|  |       return(1); | ||||||
|  |     } | ||||||
|  |     X[i] = (bigfloat)1.0 / rownrm; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   for (int k = 0; k < nm1; k++) { | ||||||
|  |     big = 0.0; | ||||||
|  |     idxpiv = 0; | ||||||
|  |      | ||||||
|  |     for (int i = k; i < n; i++) { | ||||||
|  |       ip = IPS[i]; | ||||||
|  |       ipk = n*ip + k; | ||||||
|  |       size = abs_bf(A[ipk]) * X[ip]; | ||||||
|  |       if (size > big) { | ||||||
|  | 	big = size; | ||||||
|  | 	idxpiv = i; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |      | ||||||
|  |     if (big == (bigfloat)0l) { | ||||||
|  |       std::cout<<"simq big=0\n"; | ||||||
|  |       return(2); | ||||||
|  |     } | ||||||
|  |     if (idxpiv != k) { | ||||||
|  |       int j = IPS[k]; | ||||||
|  |       IPS[k] = IPS[idxpiv]; | ||||||
|  |       IPS[idxpiv] = j; | ||||||
|  |     } | ||||||
|  |     kp = IPS[k]; | ||||||
|  |     kpk = n*kp + k; | ||||||
|  |     pivot = A[kpk]; | ||||||
|  |     kp1 = k+1; | ||||||
|  |     for (int i = kp1; i < n; i++) { | ||||||
|  |       ip = IPS[i]; | ||||||
|  |       ipk = n*ip + k; | ||||||
|  |       em = -A[ipk] / pivot; | ||||||
|  |       A[ipk] = -em; | ||||||
|  |       nip = n*ip; | ||||||
|  |       nkp = n*kp; | ||||||
|  |       aa = A.data()+nkp+kp1; | ||||||
|  |       for (int j = kp1; j < n; j++) { | ||||||
|  | 	ipj = nip + j; | ||||||
|  | 	A[ipj] = A[ipj] + em * *aa++; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   kpn = n * IPS[n-1] + n - 1;	// last element of IPS[n] th row | ||||||
|  |   if (A[kpn] == (bigfloat)0l) { | ||||||
|  |     std::cout<<"simq A[kpn]=0\n"; | ||||||
|  |     return(3); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |    | ||||||
|  |   ip = IPS[0]; | ||||||
|  |   X[0] = B[ip]; | ||||||
|  |   for (int i = 1; i < n; i++) { | ||||||
|  |     ip = IPS[i]; | ||||||
|  |     ipj = n * ip; | ||||||
|  |     sum = 0.0; | ||||||
|  |     for (int j = 0; j < i; j++) { | ||||||
|  |       sum += A[ipj] * X[j]; | ||||||
|  |       ++ipj; | ||||||
|  |     } | ||||||
|  |     X[i] = B[ip] - sum; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   ipn = n * IPS[n-1] + n - 1; | ||||||
|  |   X[n-1] = X[n-1] / A[ipn]; | ||||||
|  |    | ||||||
|  |   for (int iback = 1; iback < n; iback++) { | ||||||
|  |     //i goes (n-1),...,1 | ||||||
|  |     int i = nm1 - iback; | ||||||
|  |     ip = IPS[i]; | ||||||
|  |     nip = n*ip; | ||||||
|  |     sum = 0.0; | ||||||
|  |     aa = A.data()+nip+i+1; | ||||||
|  |     for (int j= i + 1; j < n; j++)  | ||||||
|  |       sum += *aa++ * X[j]; | ||||||
|  |     X[i] = (X[i] - sum) / A[nip+i]; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   return(0); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void AlgRemezGeneral::csv(std::ostream & os) const{ | ||||||
|  |   os << "Numerator" << std::endl; | ||||||
|  |   for(int i=0;i<=pow_n;i++){ | ||||||
|  |     os << getCoeffNum(i) << "*x^" << i; | ||||||
|  |     if(i!=pow_n) os << " + "; | ||||||
|  |   } | ||||||
|  |   os << std::endl; | ||||||
|  |  | ||||||
|  |   os << "Denominator" << std::endl; | ||||||
|  |   for(int i=0;i<=pow_d;i++){ | ||||||
|  |     os << getCoeffDen(i) << "*x^" << i; | ||||||
|  |     if(i!=pow_d) os << " + "; | ||||||
|  |   } | ||||||
|  |   os << std::endl; | ||||||
|  |  | ||||||
|  |   //For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc | ||||||
|  |   int sign; | ||||||
|  |   os << "Errors at maxima: coordinate, error, (sign)" << std::endl; | ||||||
|  |   for(int i=0;i<neq+1;i++){  | ||||||
|  |     os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   os << "Scan over range:" << std::endl; | ||||||
|  |   int npt = 60; | ||||||
|  |   bigfloat dlt = (apend - apstrt)/bigfloat(npt-1); | ||||||
|  |  | ||||||
|  |   for (bigfloat x=apstrt; x<=apend; x = x + dlt) { | ||||||
|  |     double f = evaluateFunc(x); | ||||||
|  |     double r = evaluateApprox(x); | ||||||
|  |     os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl; | ||||||
|  |   } | ||||||
|  |   return; | ||||||
|  | } | ||||||
							
								
								
									
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							| @@ -0,0 +1,170 @@ | |||||||
|  | /* | ||||||
|  |   C.Kelly Jan 2020 based on implementation by M. Clark May 2005 | ||||||
|  |  | ||||||
|  |   AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial  | ||||||
|  |   It includes optional restriction to odd/even polynomials for the numerator and/or denominator | ||||||
|  | */ | ||||||
|  |  | ||||||
|  | #ifndef INCLUDED_ALG_REMEZ_GENERAL_H | ||||||
|  | #define INCLUDED_ALG_REMEZ_GENERAL_H | ||||||
|  |  | ||||||
|  | #include <stddef.h> | ||||||
|  | #include <Grid/GridStd.h> | ||||||
|  |  | ||||||
|  | #ifdef HAVE_LIBGMP | ||||||
|  | #include "bigfloat.h" | ||||||
|  | #else | ||||||
|  | #include "bigfloat_double.h" | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|  | class AlgRemezGeneral{ | ||||||
|  |  public: | ||||||
|  |   enum PolyType { Even, Odd, Full }; | ||||||
|  |  | ||||||
|  |  private: | ||||||
|  |  | ||||||
|  |   // In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer | ||||||
|  |   bigfloat (*f)(bigfloat x, void *data); | ||||||
|  |   void *data; | ||||||
|  |  | ||||||
|  |   // The approximation parameters | ||||||
|  |   std::vector<bigfloat> param; | ||||||
|  |   bigfloat norm; | ||||||
|  |  | ||||||
|  |   // The number of non-zero terms in the numerator and denominator | ||||||
|  |   int n, d; | ||||||
|  |   // The numerator and denominator degree (i.e.  the largest power) | ||||||
|  |   int pow_n, pow_d; | ||||||
|  |    | ||||||
|  |   // Specify if the numerator and/or denominator are odd/even polynomials | ||||||
|  |   PolyType num_type; | ||||||
|  |   PolyType den_type; | ||||||
|  |   std::vector<int> num_pows; //contains the mapping, with -1 if not present | ||||||
|  |   std::vector<int> den_pows; | ||||||
|  |  | ||||||
|  |   // The bounds of the approximation | ||||||
|  |   bigfloat apstrt, apwidt, apend; | ||||||
|  |  | ||||||
|  |   // Variables used to calculate the approximation | ||||||
|  |   int nd1, iter; | ||||||
|  |   std::vector<bigfloat> xx; | ||||||
|  |   std::vector<bigfloat> mm; | ||||||
|  |   std::vector<bigfloat> step; | ||||||
|  |  | ||||||
|  |   bigfloat delta, spread; | ||||||
|  |    | ||||||
|  |   // Variables used in search | ||||||
|  |   std::vector<bigfloat> yy; | ||||||
|  |  | ||||||
|  |   // Variables used in solving linear equations | ||||||
|  |   std::vector<bigfloat> A; | ||||||
|  |   std::vector<bigfloat> B; | ||||||
|  |   std::vector<int> IPS; | ||||||
|  |  | ||||||
|  |   // The number of equations we must solve at each iteration (n+d+1) | ||||||
|  |   int neq; | ||||||
|  |  | ||||||
|  |   // The precision of the GNU MP library | ||||||
|  |   long prec; | ||||||
|  |  | ||||||
|  |   // Initialize member variables associated with the polynomial's properties | ||||||
|  |   void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in); | ||||||
|  |  | ||||||
|  |   // Initial values of maximal and minmal errors | ||||||
|  |   void initialGuess(); | ||||||
|  |  | ||||||
|  |   // Initialise step sizes | ||||||
|  |   void stpini(); | ||||||
|  |  | ||||||
|  |   // Initialize the algorithm | ||||||
|  |   void reinitializeAlgorithm(); | ||||||
|  |  | ||||||
|  |   // Solve the equations | ||||||
|  |   void equations(); | ||||||
|  |  | ||||||
|  |   // Search for error maxima and minima | ||||||
|  |   void search();  | ||||||
|  |  | ||||||
|  |   // Calculate function required for the approximation | ||||||
|  |   inline bigfloat func(bigfloat x) const{ | ||||||
|  |     return f(x, data); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Compute size and sign of the approximation error at x | ||||||
|  |   bigfloat getErr(bigfloat x, int *sign) const; | ||||||
|  |  | ||||||
|  |   // Solve the system AX=B   where X = param | ||||||
|  |   int simq(); | ||||||
|  |  | ||||||
|  |   // Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param | ||||||
|  |   bigfloat approx(bigfloat x) const; | ||||||
|  |  | ||||||
|  |  public: | ||||||
|  |    | ||||||
|  |   AlgRemezGeneral(double lower, double upper, long prec, | ||||||
|  | 		  bigfloat (*f)(bigfloat x, void *data), void *data); | ||||||
|  |  | ||||||
|  |   inline int getDegree(void) const{  | ||||||
|  |     assert(n==d); | ||||||
|  |     return n; | ||||||
|  |   } | ||||||
|  |   // Reset the bounds of the approximation | ||||||
|  |   inline void setBounds(double lower, double upper) { | ||||||
|  |     apstrt = lower; | ||||||
|  |     apend = upper; | ||||||
|  |     apwidt = apend - apstrt; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Get the bounds of the approximation | ||||||
|  |   inline void getBounds(double &lower, double &upper) const{  | ||||||
|  |     lower=(double)apstrt; | ||||||
|  |     upper=(double)apend; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Run the algorithm to generate the rational approximation | ||||||
|  |   double generateApprox(int num_degree, int den_degree,  | ||||||
|  | 			PolyType num_type, PolyType den_type, | ||||||
|  | 			const double tolerance = 1e-15, const int report_freq = 1000); | ||||||
|  |    | ||||||
|  |   inline double generateApprox(int num_degree, int den_degree,  | ||||||
|  | 			       const double tolerance = 1e-15, const int report_freq = 1000){ | ||||||
|  |     return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   // Evaluate the rational form P(x)/Q(x) using coefficients from the | ||||||
|  |   // solution vector param | ||||||
|  |   inline double evaluateApprox(double x) const{ | ||||||
|  |     return (double)approx((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param | ||||||
|  |   inline double evaluateInverseApprox(double x) const{ | ||||||
|  |     return 1.0/(double)approx((bigfloat)x); | ||||||
|  |   }   | ||||||
|  |  | ||||||
|  |   // Calculate function required for the approximation | ||||||
|  |   inline double evaluateFunc(double x) const{ | ||||||
|  |     return (double)func((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Calculate inverse function required for the approximation | ||||||
|  |   inline double evaluateInverseFunc(double x) const{ | ||||||
|  |     return 1.0/(double)func((bigfloat)x); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // Dump csv of function, approx and error | ||||||
|  |   void csv(std::ostream &os = std::cout) const; | ||||||
|  |  | ||||||
|  |   // Get the coefficient of the term x^i in the numerator | ||||||
|  |   inline double getCoeffNum(const int i) const{     | ||||||
|  |     return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]); | ||||||
|  |   } | ||||||
|  |   // Get the coefficient of the term x^i in the denominator | ||||||
|  |   inline double getCoeffDen(const int i) const{  | ||||||
|  |     if(i == pow_d) return 1.0; | ||||||
|  |     else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]);  | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
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								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
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							| @@ -0,0 +1,183 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/approx/ZMobius.cc | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #include <Grid/algorithms/approx/ZMobius.h> | ||||||
|  | #include <Grid/algorithms/approx/RemezGeneral.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | NAMESPACE_BEGIN(Approx); | ||||||
|  |  | ||||||
|  | //Compute the tanh approximation | ||||||
|  | inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){ | ||||||
|  |   int Ls = w.size(); | ||||||
|  |  | ||||||
|  |   ComplexD fxp = 1., fmp = 1.; | ||||||
|  |   for(int i=0;i<Ls;i++){ | ||||||
|  |     fxp = fxp * ( w[i] + x ); | ||||||
|  |     fmp = fmp * ( w[i] - x ); | ||||||
|  |   } | ||||||
|  |   return ((fxp - fmp)/(fxp + fmp)).real(); | ||||||
|  | } | ||||||
|  | inline double epsilonMobius(const double x, const std::vector<RealD> &w){ | ||||||
|  |   int Ls = w.size(); | ||||||
|  |  | ||||||
|  |   double fxp = 1., fmp = 1.; | ||||||
|  |   for(int i=0;i<Ls;i++){ | ||||||
|  |     fxp = fxp * ( w[i] + x ); | ||||||
|  |     fmp = fmp * ( w[i] - x ); | ||||||
|  |   } | ||||||
|  |   return (fxp - fmp)/(fxp + fmp); | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
|  | //Compute the tanh approximation in a form suitable for the Remez | ||||||
|  | bigfloat epsilonMobius(bigfloat x, void* data){ | ||||||
|  |   const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data ); | ||||||
|  |   bigfloat fxp(1.0); | ||||||
|  |   bigfloat fmp(1.0); | ||||||
|  |  | ||||||
|  |   for(int i=0;i<omega.size();i++){ | ||||||
|  |     fxp = fxp * ( bigfloat(omega[i]) + x); | ||||||
|  |     fmp = fmp * ( bigfloat(omega[i]) - x); | ||||||
|  |   } | ||||||
|  |   return (fxp - fmp)/(fxp + fmp); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||||
|  | //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||||
|  | 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound){ | ||||||
|  |   assert(omega_in.size() == Ls_in); | ||||||
|  |   omega_out.resize(Ls_out); | ||||||
|  |  | ||||||
|  |   //Use the Remez algorithm to generate the appropriate rational polynomial | ||||||
|  |   //For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)   | ||||||
|  |   AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in);  | ||||||
|  |   remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100); | ||||||
|  |   remez.csv(std::cout); | ||||||
|  |  | ||||||
|  |   //The rational approximation has the form  [ f(x) - f(-x) ] / [ f(x) + f(-x) ]  where  f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x ) | ||||||
|  |   //cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7  pg 102 | ||||||
|  |   //omega_i are therefore the negative of the complex roots of f(x) | ||||||
|  |  | ||||||
|  |   //We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial | ||||||
|  |   // \rho(\lambda) = det( A - \lambda I )    where I is the unit matrix | ||||||
|  |   //The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n   is the companion matrix  | ||||||
|  |   // A = | 0    1   0    0 0 .... 0 | | ||||||
|  |   //     | 0    0   1    0 0 .... 0 | | ||||||
|  |   //     | :    :   :    : :      : | | ||||||
|  |   //     | 0    0   0    0 0      1 | ||||||
|  |   //     | -a0 -a1 -a2  ...  ... -an| | ||||||
|  |  | ||||||
|  |  | ||||||
|  |   //Note the Remez defines the largest power to have unit coefficient | ||||||
|  |   std::vector<RealD> coeffs(Ls_out+1); | ||||||
|  |   for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers | ||||||
|  |   for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers | ||||||
|  |  | ||||||
|  |   std::vector<std::complex<RealD> > roots(Ls_out); | ||||||
|  |  | ||||||
|  |   //Form the companion matrix | ||||||
|  |   Eigen::MatrixXd compn(Ls_out,Ls_out); | ||||||
|  |   for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.; | ||||||
|  |   compn(Ls_out - 1, 0) = -coeffs[0]; | ||||||
|  |    | ||||||
|  |   for(int j=1;j<Ls_out;j++){ | ||||||
|  |     for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.; | ||||||
|  |     compn(Ls_out - 1, j) = -coeffs[j]; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   //Eigensolve | ||||||
|  |   Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false); | ||||||
|  |  | ||||||
|  |   const auto & ev = slv.eigenvalues(); | ||||||
|  |   for(int i=0;i<Ls_out;i++) | ||||||
|  |     omega_out[i] = -ev(i); | ||||||
|  |  | ||||||
|  |   //Sort ascending (smallest at start of vector!) | ||||||
|  |   std::sort(omega_out.begin(), omega_out.end(),  | ||||||
|  | 	    [&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); }); | ||||||
|  |  | ||||||
|  |   //McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension | ||||||
|  |   std::vector<ComplexD> omega_tmp = omega_out; | ||||||
|  |   int s_low=0, s_high=Ls_out-1, ss=0; | ||||||
|  |   for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega | ||||||
|  |     int s_to; | ||||||
|  |     if(ss % 2 == 0){ | ||||||
|  |       s_to = s_low++; | ||||||
|  |     }else{ | ||||||
|  |       s_to = s_high--; | ||||||
|  |     } | ||||||
|  |     omega_out[s_to] = omega_tmp[s_from]; | ||||||
|  |     ++ss; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   std::cout << "Resulting omega_i:" << std::endl;   | ||||||
|  |   for(int i=0;i<Ls_out;i++) | ||||||
|  |     std::cout << omega_out[i] << std::endl; | ||||||
|  |  | ||||||
|  |   std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl; | ||||||
|  |   std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n"; | ||||||
|  |    | ||||||
|  |   int npt = 60; | ||||||
|  |   double dlt = lambda_bound/double(npt-1); | ||||||
|  |  | ||||||
|  |   for (int i =0; i<npt; i++){ | ||||||
|  |     double x = i*dlt; | ||||||
|  |     double r = remez.evaluateApprox(x); | ||||||
|  |     double p = epsilonMobius(x, omega_out); | ||||||
|  |     double e = epsilonMobius(x, omega_in); | ||||||
|  |  | ||||||
|  |     std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  |    | ||||||
|  | //mobius_param = b+c   with b-c=1 | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||||
|  |   std::vector<RealD> omega_in(Ls_in, 1./mobius_param); | ||||||
|  |   computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||||
|  | 			 const RealD mobius_param_out, const int Ls_out,  | ||||||
|  | 			 const RealD mobius_param_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound){ | ||||||
|  |   computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound); | ||||||
|  |   for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out; | ||||||
|  | } | ||||||
|  | //Assumes mobius_param_out == mobius_param_in | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||||
|  |   computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
							
								
								
									
										57
									
								
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								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
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							| @@ -0,0 +1,57 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/approx/ZMobius.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_ZMOBIUS_APPROX_H | ||||||
|  | #define GRID_ZMOBIUS_APPROX_H | ||||||
|  |  | ||||||
|  | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | NAMESPACE_BEGIN(Approx); | ||||||
|  |  | ||||||
|  | //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||||
|  | //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||||
|  | 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound); | ||||||
|  |    | ||||||
|  | //mobius_param = b+c   with b-c=1 | ||||||
|  | void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||||
|  | 			 const RealD mobius_param_out, const int Ls_out,  | ||||||
|  | 			 const RealD mobius_param_in, const int Ls_in, | ||||||
|  | 			 const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | //Assumes mobius_param_out == mobius_param_in | ||||||
|  | void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -58,8 +58,8 @@ | |||||||
|  |  | ||||||
| /* Compute the partial fraction expansion coefficients (alpha) from the | /* Compute the partial fraction expansion coefficients (alpha) from the | ||||||
|  * factored form */ |  * factored form */ | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
| namespace Approx { | NAMESPACE_BEGIN(Approx); | ||||||
|  |  | ||||||
| static void construct_partfrac(izd *z) { | static void construct_partfrac(izd *z) { | ||||||
|   int dn = z -> dn, dd = z -> dd, type = z -> type; |   int dn = z -> dn, dd = z -> dd, type = z -> type; | ||||||
| @@ -516,7 +516,9 @@ zolotarev_data* higham(PRECISION epsilon, int n) { | |||||||
|   free(d); |   free(d); | ||||||
|   return zd; |   return zd; | ||||||
| } | } | ||||||
| }} |  | ||||||
|  | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #ifdef TEST | #ifdef TEST | ||||||
|  |  | ||||||
| @@ -585,6 +587,7 @@ static PRECISION zolotarev_cayley_eval(PRECISION x, zolotarev_data* rdata) { | |||||||
|   return (ONE - T) / (ONE + T); |   return (ONE - T) / (ONE + T); | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
| /* Test program. Apart from printing out the parameters for R(x) it produces | /* Test program. Apart from printing out the parameters for R(x) it produces | ||||||
|  * the following data files for plotting (unless NPLOT is defined): |  * the following data files for plotting (unless NPLOT is defined): | ||||||
|  * |  * | ||||||
| @@ -723,5 +726,5 @@ int main(int argc, char** argv) { | |||||||
|   return EXIT_SUCCESS; |   return EXIT_SUCCESS; | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
| #endif /* TEST */ | #endif /* TEST */ | ||||||
|  |  | ||||||
|   | |||||||
| @@ -1,13 +1,13 @@ | |||||||
| /* -*- Mode: C; comment-column: 22; fill-column: 79; -*- */ | /* -*- Mode: C; comment-column: 22; fill-column: 79; -*- */ | ||||||
|  |  | ||||||
| #ifdef __cplusplus | #ifdef __cplusplus | ||||||
| namespace Grid { | #include <Grid/Namespace.h> | ||||||
| namespace Approx { | NAMESPACE_BEGIN(Grid); | ||||||
|  | NAMESPACE_BEGIN(Approx); | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
| #define HVERSION Header Time-stamp: <14-OCT-2004 09:26:51.00 adk@MISSCONTRARY> | #define HVERSION Header Time-stamp: <14-OCT-2004 09:26:51.00 adk@MISSCONTRARY> | ||||||
|  |  | ||||||
|  |  | ||||||
| #ifndef ZOLOTAREV_INTERNAL | #ifndef ZOLOTAREV_INTERNAL | ||||||
| #ifndef PRECISION | #ifndef PRECISION | ||||||
| #define PRECISION double | #define PRECISION double | ||||||
| @@ -83,5 +83,6 @@ void zolotarev_free(zolotarev_data *zdata); | |||||||
| #endif | #endif | ||||||
|  |  | ||||||
| #ifdef __cplusplus | #ifdef __cplusplus | ||||||
| }} | NAMESPACE_END(Approx); | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -10,10 +10,12 @@ | |||||||
| #ifndef INCLUDED_BIGFLOAT_H | #ifndef INCLUDED_BIGFLOAT_H | ||||||
| #define INCLUDED_BIGFLOAT_H | #define INCLUDED_BIGFLOAT_H | ||||||
|  |  | ||||||
|  | #define __GMP_WITHIN_CONFIGURE | ||||||
| #include <gmp.h> | #include <gmp.h> | ||||||
| #include <mpf2mpfr.h> | #include <mpf2mpfr.h> | ||||||
| #include <mpfr.h> | #include <mpfr.h> | ||||||
|  | #undef  __GMP_WITHIN_CONFIGURE | ||||||
|  |  | ||||||
| class bigfloat { | class bigfloat { | ||||||
|  |  | ||||||
| private: | private: | ||||||
|   | |||||||
| @@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef INCLUDED_BIGFLOAT_DOUBLE_H | ||||||
|  | #define INCLUDED_BIGFLOAT_DOUBLE_H | ||||||
|  |  | ||||||
| #include <math.h> | #include <math.h> | ||||||
|  |  | ||||||
| typedef double mfloat;  | typedef double mfloat;  | ||||||
| @@ -186,4 +190,6 @@ public: | |||||||
|   //  friend bigfloat& random(void); |   //  friend bigfloat& random(void); | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -90,8 +90,8 @@ class TwoLevelFlexiblePcg : public LinearFunction<Field> | |||||||
|   void operator() (const Field &src, Field &psi){ |   void operator() (const Field &src, Field &psi){ | ||||||
|   void operator() (const Field &src, Field &psi){ |   void operator() (const Field &src, Field &psi){ | ||||||
|  |  | ||||||
|     psi.checkerboard = src.checkerboard; |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|     grid             = src._grid; |     grid             = src.Grid(); | ||||||
|  |  | ||||||
|     RealD f; |     RealD f; | ||||||
|     RealD rtzp,rtz,a,d,b; |     RealD rtzp,rtz,a,d,b; | ||||||
|   | |||||||
							
								
								
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,234 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/BiCGSTAB.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: juettner <juettner@soton.ac.uk> | ||||||
|  | Author: David Murphy <djmurphy@mit.edu> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef GRID_BICGSTAB_H | ||||||
|  | #define GRID_BICGSTAB_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////// | ||||||
|  | // Base classes for iterative processes based on operators | ||||||
|  | // single input vec, single output vec. | ||||||
|  | ///////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  | template <class Field> | ||||||
|  | class BiCGSTAB : public OperatorFunction<Field>  | ||||||
|  | { | ||||||
|  |   public: | ||||||
|  |     using OperatorFunction<Field>::operator(); | ||||||
|  |      | ||||||
|  |     bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||||
|  |                              // Defaults true. | ||||||
|  |     RealD Tolerance; | ||||||
|  |     Integer MaxIterations; | ||||||
|  |     Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |    | ||||||
|  |     BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) :  | ||||||
|  |       Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){}; | ||||||
|  |  | ||||||
|  |     void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi)  | ||||||
|  |     { | ||||||
|  |       psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |       conformable(psi, src); | ||||||
|  |  | ||||||
|  |       RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1); | ||||||
|  |       RealD a(0), bo(0), b(0), ssq(0); | ||||||
|  |  | ||||||
|  |       Field p(src); | ||||||
|  |       Field r(src); | ||||||
|  |       Field rhat(src); | ||||||
|  |       Field v(src); | ||||||
|  |       Field s(src); | ||||||
|  |       Field t(src); | ||||||
|  |       Field h(src); | ||||||
|  |  | ||||||
|  |       v = Zero(); | ||||||
|  |       p = Zero(); | ||||||
|  |  | ||||||
|  |       // Initial residual computation & set up | ||||||
|  |       RealD guess = norm2(psi); | ||||||
|  |       assert(std::isnan(guess) == 0); | ||||||
|  |      | ||||||
|  |       Linop.Op(psi, v); | ||||||
|  |       b = norm2(v); | ||||||
|  |  | ||||||
|  |       r = src - v; | ||||||
|  |       rhat = r; | ||||||
|  |       a = norm2(r); | ||||||
|  |       ssq = norm2(src); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:   src " << ssq << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:    mp " << b << std::endl; | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:     r " << a << std::endl; | ||||||
|  |  | ||||||
|  |       RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |       // Check if guess is really REALLY good :) | ||||||
|  |       if(a <= rsq){ return; } | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       GridStopWatch LinalgTimer; | ||||||
|  |       GridStopWatch InnerTimer; | ||||||
|  |       GridStopWatch AxpyNormTimer; | ||||||
|  |       GridStopWatch LinearCombTimer; | ||||||
|  |       GridStopWatch MatrixTimer; | ||||||
|  |       GridStopWatch SolverTimer; | ||||||
|  |  | ||||||
|  |       SolverTimer.Start(); | ||||||
|  |       int k; | ||||||
|  |       for (k = 1; k <= MaxIterations; k++)  | ||||||
|  |       { | ||||||
|  |         rho_prev = rho; | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Crho  = innerProduct(rhat,r); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         rho = Crho.real(); | ||||||
|  |  | ||||||
|  |         beta = (rho / rho_prev) * (alpha / omega); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  |         bo = beta * omega; | ||||||
|  | 	{ | ||||||
|  | 	  autoView( p_v , p, AcceleratorWrite); | ||||||
|  | 	  autoView( r_v , r, AcceleratorRead); | ||||||
|  | 	  autoView( v_v , v, AcceleratorRead); | ||||||
|  | 	  accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	} | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         MatrixTimer.Start(); | ||||||
|  |         Linop.Op(p,v); | ||||||
|  |         MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Calpha = innerProduct(rhat,v); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         alpha = rho / Calpha.real(); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  | 	{ | ||||||
|  | 	  autoView( p_v , p, AcceleratorRead); | ||||||
|  | 	  autoView( r_v , r, AcceleratorRead); | ||||||
|  | 	  autoView( v_v , v, AcceleratorRead); | ||||||
|  | 	  autoView( psi_v,psi, AcceleratorRead); | ||||||
|  | 	  autoView( h_v  ,  h, AcceleratorWrite); | ||||||
|  | 	  autoView( s_v  ,  s, AcceleratorWrite); | ||||||
|  | 	  accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	  accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss)); | ||||||
|  |  	  }); | ||||||
|  |         } | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         MatrixTimer.Start(); | ||||||
|  |         Linop.Op(s,t); | ||||||
|  |         MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinalgTimer.Start(); | ||||||
|  |         InnerTimer.Start(); | ||||||
|  |         ComplexD Comega = innerProduct(t,s); | ||||||
|  |         InnerTimer.Stop(); | ||||||
|  |         omega = Comega.real() / norm2(t); | ||||||
|  |  | ||||||
|  |         LinearCombTimer.Start(); | ||||||
|  | 	{ | ||||||
|  | 	  autoView( psi_v,psi, AcceleratorWrite); | ||||||
|  | 	  autoView( r_v , r, AcceleratorWrite); | ||||||
|  | 	  autoView( h_v , h, AcceleratorRead); | ||||||
|  | 	  autoView( s_v , s, AcceleratorRead); | ||||||
|  | 	  autoView( t_v , t, AcceleratorRead); | ||||||
|  | 	  accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	      coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss)); | ||||||
|  | 	      coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss)); | ||||||
|  | 	    }); | ||||||
|  | 	} | ||||||
|  |         LinearCombTimer.Stop(); | ||||||
|  | 	 | ||||||
|  |         cp = norm2(r); | ||||||
|  |         LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |         std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         // Stopping condition | ||||||
|  |         if(cp <= rsq)  | ||||||
|  |         { | ||||||
|  |           SolverTimer.Stop(); | ||||||
|  |           Linop.Op(psi, v); | ||||||
|  |           p = v - src; | ||||||
|  |  | ||||||
|  |           RealD srcnorm = sqrt(norm2(src)); | ||||||
|  |           RealD resnorm = sqrt(norm2(p)); | ||||||
|  |           RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |           std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |           std::cout << GridLogMessage << "Time breakdown " << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() << std::endl; | ||||||
|  |           std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |           if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); } | ||||||
|  |  | ||||||
|  |           IterationsToComplete = k;	 | ||||||
|  |  | ||||||
|  |           return; | ||||||
|  |         } | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |       if(ErrorOnNoConverge){ assert(0); } | ||||||
|  |       IterationsToComplete = k; | ||||||
|  |     } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										158
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,158 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||||
|  | Author: David Murphy <djmurphy@mit.edu> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #ifndef GRID_BICGSTAB_MIXED_PREC_H | ||||||
|  | #define GRID_BICGSTAB_MIXED_PREC_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | // Mixed precision restarted defect correction BiCGSTAB | ||||||
|  | template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||||
|  | class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD>  | ||||||
|  | { | ||||||
|  |   public:                                                 | ||||||
|  |     RealD   Tolerance; | ||||||
|  |     RealD   InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||||
|  |     Integer MaxInnerIterations; | ||||||
|  |     Integer MaxOuterIterations; | ||||||
|  |     GridBase* SinglePrecGrid; // Grid for single-precision fields | ||||||
|  |     RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||||
|  |     LinearOperatorBase<FieldF> &Linop_f; | ||||||
|  |     LinearOperatorBase<FieldD> &Linop_d; | ||||||
|  |  | ||||||
|  |     Integer TotalInnerIterations; //Number of inner CG iterations | ||||||
|  |     Integer TotalOuterIterations; //Number of restarts | ||||||
|  |     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||||
|  |  | ||||||
|  |     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||||
|  |     LinearFunction<FieldF> *guesser; | ||||||
|  |      | ||||||
|  |     MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid,  | ||||||
|  |         LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) :  | ||||||
|  |       Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit),  | ||||||
|  |       MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {}; | ||||||
|  |  | ||||||
|  |     void useGuesser(LinearFunction<FieldF>& g){ | ||||||
|  |       guesser = &g; | ||||||
|  |     } | ||||||
|  |    | ||||||
|  |     void operator() (const FieldD& src_d_in, FieldD& sol_d) | ||||||
|  |     { | ||||||
|  |       TotalInnerIterations = 0; | ||||||
|  |      | ||||||
|  |       GridStopWatch TotalTimer; | ||||||
|  |       TotalTimer.Start(); | ||||||
|  |        | ||||||
|  |       int cb = src_d_in.Checkerboard(); | ||||||
|  |       sol_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       RealD src_norm = norm2(src_d_in); | ||||||
|  |       RealD stop = src_norm * Tolerance*Tolerance; | ||||||
|  |  | ||||||
|  |       GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||||
|  |       FieldD tmp_d(DoublePrecGrid); | ||||||
|  |       tmp_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldD tmp2_d(DoublePrecGrid); | ||||||
|  |       tmp2_d.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldD src_d(DoublePrecGrid); | ||||||
|  |       src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||||
|  |        | ||||||
|  |       RealD inner_tol = InnerTolerance; | ||||||
|  |        | ||||||
|  |       FieldF src_f(SinglePrecGrid); | ||||||
|  |       src_f.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       FieldF sol_f(SinglePrecGrid); | ||||||
|  |       sol_f.Checkerboard() = cb; | ||||||
|  |        | ||||||
|  |       BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||||
|  |       CG_f.ErrorOnNoConverge = false; | ||||||
|  |  | ||||||
|  |       GridStopWatch InnerCGtimer; | ||||||
|  |  | ||||||
|  |       GridStopWatch PrecChangeTimer; | ||||||
|  |        | ||||||
|  |       Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||||
|  |          | ||||||
|  |       for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++) | ||||||
|  |       { | ||||||
|  |         // Compute double precision rsd and also new RHS vector. | ||||||
|  |         Linop_d.Op(sol_d, tmp_d); | ||||||
|  |         RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector | ||||||
|  |          | ||||||
|  |         std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl; | ||||||
|  |  | ||||||
|  |         if(norm < OuterLoopNormMult * stop){ | ||||||
|  |           std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl; | ||||||
|  |           break; | ||||||
|  |         } | ||||||
|  |         while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ?? | ||||||
|  |  | ||||||
|  |         PrecChangeTimer.Start(); | ||||||
|  |         precisionChange(src_f, src_d); | ||||||
|  |         PrecChangeTimer.Stop(); | ||||||
|  |          | ||||||
|  |         sol_f = Zero(); | ||||||
|  |  | ||||||
|  |         //Optionally improve inner solver guess (eg using known eigenvectors) | ||||||
|  |         if(guesser != NULL){ (*guesser)(src_f, sol_f); } | ||||||
|  |  | ||||||
|  |         //Inner CG | ||||||
|  |         CG_f.Tolerance = inner_tol; | ||||||
|  |         InnerCGtimer.Start(); | ||||||
|  |         CG_f(Linop_f, src_f, sol_f); | ||||||
|  |         InnerCGtimer.Stop(); | ||||||
|  |         TotalInnerIterations += CG_f.IterationsToComplete; | ||||||
|  |          | ||||||
|  |         //Convert sol back to double and add to double prec solution | ||||||
|  |         PrecChangeTimer.Start(); | ||||||
|  |         precisionChange(tmp_d, sol_f); | ||||||
|  |         PrecChangeTimer.Stop(); | ||||||
|  |          | ||||||
|  |         axpy(sol_d, 1.0, tmp_d, sol_d); | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       //Final trial CG | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl; | ||||||
|  |        | ||||||
|  |       BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||||
|  |       CG_d(Linop_d, src_d_in, sol_d); | ||||||
|  |       TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||||
|  |  | ||||||
|  |       TotalTimer.Stop(); | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||||
|  |       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -27,11 +27,9 @@ See the full license in the file "LICENSE" in the top level distribution | |||||||
| directory | directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef GRID_BLOCK_CONJUGATE_GRADIENT_H | #pragma once | ||||||
| #define GRID_BLOCK_CONJUGATE_GRADIENT_H |  | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
| namespace Grid { |  | ||||||
|  |  | ||||||
| enum BlockCGtype { BlockCG, BlockCGrQ, CGmultiRHS, BlockCGVec, BlockCGrQVec }; | enum BlockCGtype { BlockCG, BlockCGrQ, CGmultiRHS, BlockCGVec, BlockCGrQVec }; | ||||||
|  |  | ||||||
| @@ -54,6 +52,7 @@ class BlockConjugateGradient : public OperatorFunction<Field> { | |||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|   Integer PrintInterval; //GridLogMessages or Iterative |   Integer PrintInterval; //GridLogMessages or Iterative | ||||||
|  |   RealD TrueResidual; | ||||||
|    |    | ||||||
|   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) |   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||||
|     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) |     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) | ||||||
| @@ -154,12 +153,12 @@ virtual void operator()(LinearOperatorBase<Field> &Linop, const std::vector<Fiel | |||||||
| void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X)  | void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X)  | ||||||
| { | { | ||||||
|   int Orthog = blockDim; // First dimension is block dim; this is an assumption |   int Orthog = blockDim; // First dimension is block dim; this is an assumption | ||||||
|   Nblock = B._grid->_fdimensions[Orthog]; |   Nblock = B.Grid()->_fdimensions[Orthog]; | ||||||
| /* FAKE */ | /* FAKE */ | ||||||
|   Nblock=8; |   Nblock=8; | ||||||
|   std::cout<<GridLogMessage<<" Block Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; |   std::cout<<GridLogMessage<<" Block Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; | ||||||
|  |  | ||||||
|   X.checkerboard = B.checkerboard; |   X.Checkerboard() = B.Checkerboard(); | ||||||
|   conformable(X, B); |   conformable(X, B); | ||||||
|  |  | ||||||
|   Field tmp(B); |   Field tmp(B); | ||||||
| @@ -308,7 +307,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | |||||||
|  |  | ||||||
|       Linop.HermOp(X, AD); |       Linop.HermOp(X, AD); | ||||||
|       AD = AD-B; |       AD = AD-B; | ||||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl; |       TrueResidual = std::sqrt(norm2(AD)/norm2(B)); | ||||||
|  |       std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
| @@ -334,11 +334,11 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | |||||||
| void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi)  | void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi)  | ||||||
| { | { | ||||||
|   int Orthog = blockDim; // First dimension is block dim |   int Orthog = blockDim; // First dimension is block dim | ||||||
|   Nblock = Src._grid->_fdimensions[Orthog]; |   Nblock = Src.Grid()->_fdimensions[Orthog]; | ||||||
|  |  | ||||||
|   std::cout<<GridLogMessage<<"MultiRHS Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; |   std::cout<<GridLogMessage<<"MultiRHS Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; | ||||||
|  |  | ||||||
|   Psi.checkerboard = Src.checkerboard; |   Psi.Checkerboard() = Src.Checkerboard(); | ||||||
|   conformable(Psi, Src); |   conformable(Psi, Src); | ||||||
|  |  | ||||||
|   Field P(Src); |   Field P(Src); | ||||||
| @@ -444,7 +444,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field & | |||||||
|  |  | ||||||
|       Linop.HermOp(Psi, AP); |       Linop.HermOp(Psi, AP); | ||||||
|       AP = AP-Src; |       AP = AP-Src; | ||||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl; |       TrueResidual = std::sqrt(norm2(AP)/norm2(Src)); | ||||||
|  |       std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
| @@ -478,7 +479,7 @@ void MaddMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector< | |||||||
|   for(int b=0;b<Nblock;b++){ |   for(int b=0;b<Nblock;b++){ | ||||||
|     tmp[b]   = Y[b]; |     tmp[b]   = Y[b]; | ||||||
|     for(int bp=0;bp<Nblock;bp++) { |     for(int bp=0;bp<Nblock;bp++) { | ||||||
|       tmp[b] = tmp[b] + (scale*m(bp,b))*X[bp];  |       tmp[b] = tmp[b] + scomplex(scale*m(bp,b))*X[bp];  | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|   for(int b=0;b<Nblock;b++){ |   for(int b=0;b<Nblock;b++){ | ||||||
| @@ -488,9 +489,9 @@ void MaddMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector< | |||||||
| void MulMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector<Field> &X){ | void MulMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector<Field> &X){ | ||||||
|   // Should make this cache friendly with site outermost, parallel_for |   // Should make this cache friendly with site outermost, parallel_for | ||||||
|   for(int b=0;b<Nblock;b++){ |   for(int b=0;b<Nblock;b++){ | ||||||
|     AP[b] = zero; |     AP[b] = Zero(); | ||||||
|     for(int bp=0;bp<Nblock;bp++) { |     for(int bp=0;bp<Nblock;bp++) { | ||||||
|       AP[b] += (m(bp,b))*X[bp];  |       AP[b] += scomplex(m(bp,b))*X[bp];  | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
| } | } | ||||||
| @@ -517,7 +518,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|   std::cout<<GridLogMessage<<" Block Conjugate Gradient Vec rQ : Nblock "<<Nblock<<std::endl; |   std::cout<<GridLogMessage<<" Block Conjugate Gradient Vec rQ : Nblock "<<Nblock<<std::endl; | ||||||
|  |  | ||||||
|   for(int b=0;b<Nblock;b++){  |   for(int b=0;b<Nblock;b++){  | ||||||
|     X[b].checkerboard = B[b].checkerboard; |     X[b].Checkerboard() = B[b].Checkerboard(); | ||||||
|     conformable(X[b], B[b]); |     conformable(X[b], B[b]); | ||||||
|     conformable(X[b], X[0]);  |     conformable(X[b], X[0]);  | ||||||
|   } |   } | ||||||
| @@ -655,7 +656,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|       if ( rr > max_resid ) max_resid = rr; |       if ( rr > max_resid ) max_resid = rr; | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< sqrt(rrsum/sssum) << " max "<< sqrt(max_resid) <<std::endl; |     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl; | ||||||
|  |  | ||||||
|     if ( max_resid < Tolerance*Tolerance ) {  |     if ( max_resid < Tolerance*Tolerance ) {  | ||||||
|  |  | ||||||
| @@ -670,7 +671,8 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|  |  | ||||||
|       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); |       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); | ||||||
|       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; |       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; | ||||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(normv(AD)/normv(B)) <<std::endl; |       TrueResidual = std::sqrt(normv(AD)/normv(B)); | ||||||
|  |       std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; |       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||||
| @@ -690,9 +692,7 @@ void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field | |||||||
|   IterationsToComplete = k; |   IterationsToComplete = k; | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif |  | ||||||
|   | |||||||
| @@ -0,0 +1,248 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/CommunicationAvoidingGeneralisedMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class CommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // Throw an assert when CAGMRES fails to converge, | ||||||
|  |                           // defaults to true | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |  | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer RestartLength; | ||||||
|  |   Integer MaxNumberOfRestarts; | ||||||
|  |   Integer IterationCount; // Number of iterations the CAGMRES took to finish, | ||||||
|  |                           // filled in upon completion | ||||||
|  |  | ||||||
|  |   GridStopWatch MatrixTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |   GridStopWatch QrTimer; | ||||||
|  |   GridStopWatch CompSolutionTimer; | ||||||
|  |  | ||||||
|  |   Eigen::MatrixXcd H; | ||||||
|  |  | ||||||
|  |   std::vector<ComplexD> y; | ||||||
|  |   std::vector<ComplexD> gamma; | ||||||
|  |   std::vector<ComplexD> c; | ||||||
|  |   std::vector<ComplexD> s; | ||||||
|  |  | ||||||
|  |   CommunicationAvoidingGeneralisedMinimalResidual(RealD   tol, | ||||||
|  |                                                   Integer maxit, | ||||||
|  |                                                   Integer restart_length, | ||||||
|  |                                                   bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , RestartLength(restart_length) | ||||||
|  |       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv) | ||||||
|  |       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||||
|  |       , y(RestartLength + 1, 0.) | ||||||
|  |       , gamma(RestartLength + 1, 0.) | ||||||
|  |       , c(RestartLength + 1, 0.) | ||||||
|  |       , s(RestartLength + 1, 0.) {}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular GMRES" << std::endl; | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||||
|  |  | ||||||
|  |     MatrixTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |     QrTimer.Reset(); | ||||||
|  |     CompSolutionTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     IterationCount = 0; | ||||||
|  |  | ||||||
|  |     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||||
|  |  | ||||||
|  |       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |  | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinOp.Op(psi,r); | ||||||
|  |         axpy(r,-1.0,src,r); | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "CommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "CAGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "CAGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "CAGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "CAGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "CAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "CommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||||
|  |  | ||||||
|  |     RealD cp = 0; | ||||||
|  |  | ||||||
|  |     Field w(src.Grid()); | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     // this should probably be made a class member so that it is only allocated once, not in every restart | ||||||
|  |     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(psi, w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r = src - w; | ||||||
|  |  | ||||||
|  |     gamma[0] = sqrt(norm2(r)); | ||||||
|  |  | ||||||
|  |     ComplexD scale = 1.0/gamma[0]; | ||||||
|  |     v[0] = scale * r; | ||||||
|  |  | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for (int i=0; i<RestartLength; i++) { | ||||||
|  |  | ||||||
|  |       IterationCount++; | ||||||
|  |  | ||||||
|  |       arnoldiStep(LinOp, v, w, i); | ||||||
|  |  | ||||||
|  |       qrUpdate(i); | ||||||
|  |  | ||||||
|  |       cp = norm(gamma[i+1]); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||||
|  |  | ||||||
|  |         computeSolution(v, psi, i); | ||||||
|  |  | ||||||
|  |         return cp; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     assert(0); // Never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) { | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(v[iter], w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     for (int i = 0; i <= iter; ++i) { | ||||||
|  |       H(iter, i) = innerProduct(v[i], w); | ||||||
|  |       w = w - ComplexD(H(iter, i)) * v[i]; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     H(iter, iter + 1) = sqrt(norm2(w)); | ||||||
|  |     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void qrUpdate(int iter) { | ||||||
|  |  | ||||||
|  |     QrTimer.Start(); | ||||||
|  |     for (int i = 0; i < iter ; ++i) { | ||||||
|  |       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i + 1) = tmp; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     // Compute new Givens Rotation | ||||||
|  |     auto nu     = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||||
|  |     c[iter]     = H(iter, iter) / nu; | ||||||
|  |     s[iter]     = H(iter, iter + 1) / nu; | ||||||
|  |  | ||||||
|  |     // Apply new Givens rotation | ||||||
|  |     H(iter, iter)     = nu; | ||||||
|  |     H(iter, iter + 1) = 0.; | ||||||
|  |  | ||||||
|  |     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||||
|  |     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||||
|  |     QrTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void computeSolution(std::vector<Field> const &v, Field &psi, int iter) { | ||||||
|  |  | ||||||
|  |     CompSolutionTimer.Start(); | ||||||
|  |     for (int i = iter; i >= 0; i--) { | ||||||
|  |       y[i] = gamma[i]; | ||||||
|  |       for (int k = i + 1; k <= iter; k++) | ||||||
|  |         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||||
|  |       y[i] = y[i] / ComplexD(H(i, i)); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     for (int i = 0; i <= iter; i++) | ||||||
|  |       psi = psi + v[i] * y[i]; | ||||||
|  |     CompSolutionTimer.Stop(); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
|  | #endif | ||||||
| @@ -31,7 +31,7 @@ directory | |||||||
| #ifndef GRID_CONJUGATE_GRADIENT_H | #ifndef GRID_CONJUGATE_GRADIENT_H | ||||||
| #define GRID_CONJUGATE_GRADIENT_H | #define GRID_CONJUGATE_GRADIENT_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for iterative processes based on operators | // Base classes for iterative processes based on operators | ||||||
| @@ -41,11 +41,15 @@ namespace Grid { | |||||||
| template <class Field> | template <class Field> | ||||||
| class ConjugateGradient : public OperatorFunction<Field> { | class ConjugateGradient : public OperatorFunction<Field> { | ||||||
| public: | public: | ||||||
|  |  | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. |   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||||
|                            // Defaults true. |                            // Defaults true. | ||||||
|   RealD Tolerance; |   RealD Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |   RealD TrueResidual; | ||||||
|    |    | ||||||
|   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) |   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||||
|     : Tolerance(tol), |     : Tolerance(tol), | ||||||
| @@ -54,11 +58,12 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|  |  | ||||||
|   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { |   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |  | ||||||
|     psi.checkerboard = src.checkerboard; |  | ||||||
|     conformable(psi, src); |     conformable(psi, src); | ||||||
|  |  | ||||||
|     RealD cp, c, a, d, b, ssq, qq, b_pred; |     RealD cp, c, a, d, b, ssq, qq; | ||||||
|  |     //RealD b_pred; | ||||||
|  |  | ||||||
|     Field p(src); |     Field p(src); | ||||||
|     Field mmp(src); |     Field mmp(src); | ||||||
| @@ -68,7 +73,6 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|     RealD guess = norm2(psi); |     RealD guess = norm2(psi); | ||||||
|     assert(std::isnan(guess) == 0); |     assert(std::isnan(guess) == 0); | ||||||
|      |      | ||||||
|      |  | ||||||
|     Linop.HermOpAndNorm(psi, mmp, d, b); |     Linop.HermOpAndNorm(psi, mmp, d, b); | ||||||
|      |      | ||||||
|     r = src - mmp; |     r = src - mmp; | ||||||
| @@ -78,6 +82,14 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|     cp = a; |     cp = a; | ||||||
|     ssq = norm2(src); |     ssq = norm2(src); | ||||||
|  |  | ||||||
|  |     // Handle trivial case of zero src | ||||||
|  |     if (ssq == 0.){ | ||||||
|  |       psi = Zero(); | ||||||
|  |       IterationsToComplete = 1; | ||||||
|  |       TrueResidual = 0.; | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; | ||||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; |     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; | ||||||
| @@ -89,6 +101,9 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|  |  | ||||||
|     // Check if guess is really REALLY good :) |     // Check if guess is really REALLY good :) | ||||||
|     if (cp <= rsq) { |     if (cp <= rsq) { | ||||||
|  |       TrueResidual = std::sqrt(a/ssq); | ||||||
|  |       std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl; | ||||||
|  |       IterationsToComplete = 0;	 | ||||||
|       return; |       return; | ||||||
|     } |     } | ||||||
|  |  | ||||||
| @@ -104,7 +119,7 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|  |  | ||||||
|     SolverTimer.Start(); |     SolverTimer.Start(); | ||||||
|     int k; |     int k; | ||||||
|     for (k = 1; k <= MaxIterations*1000; k++) { |     for (k = 1; k <= MaxIterations; k++) { | ||||||
|       c = cp; |       c = cp; | ||||||
|  |  | ||||||
|       MatrixTimer.Start(); |       MatrixTimer.Start(); | ||||||
| @@ -125,15 +140,20 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|       b = cp / c; |       b = cp / c; | ||||||
|  |  | ||||||
|       LinearCombTimer.Start(); |       LinearCombTimer.Start(); | ||||||
|       parallel_for(int ss=0;ss<src._grid->oSites();ss++){ |       { | ||||||
| 	vstream(psi[ss], a      *  p[ss] + psi[ss]); | 	autoView( psi_v , psi, AcceleratorWrite); | ||||||
| 	vstream(p  [ss], b      *  p[ss] + r[ss]); | 	autoView( p_v   , p,   AcceleratorWrite); | ||||||
|  | 	autoView( r_v   , r,   AcceleratorWrite); | ||||||
|  | 	accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{ | ||||||
|  | 	    coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss)); | ||||||
|  | 	    coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss)); | ||||||
|  | 	}); | ||||||
|       } |       } | ||||||
|       LinearCombTimer.Stop(); |       LinearCombTimer.Stop(); | ||||||
|       LinalgTimer.Stop(); |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|       std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k |       std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k | ||||||
|                 << " residual^2 " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; |                 << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|       // Stopping condition |       // Stopping condition | ||||||
|       if (cp <= rsq) { |       if (cp <= rsq) { | ||||||
| @@ -141,37 +161,43 @@ class ConjugateGradient : public OperatorFunction<Field> { | |||||||
|         Linop.HermOpAndNorm(psi, mmp, d, qq); |         Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||||
|         p = mmp - src; |         p = mmp - src; | ||||||
|  |  | ||||||
|         RealD srcnorm = sqrt(norm2(src)); |         RealD srcnorm = std::sqrt(norm2(src)); | ||||||
|         RealD resnorm = sqrt(norm2(p)); |         RealD resnorm = std::sqrt(norm2(p)); | ||||||
|         RealD true_residual = resnorm / srcnorm; |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|         std::cout << GridLogMessage << "ConjugateGradient Converged on iteration " << k << std::endl; |         std::cout << GridLogMessage << "ConjugateGradient Converged on iteration " << k  | ||||||
|         std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp / ssq)<<std::endl; | 		  << "\tComputed residual " << std::sqrt(cp / ssq) | ||||||
| 	std::cout << GridLogMessage << "\tTrue residual " << true_residual<<std::endl; | 		  << "\tTrue residual " << true_residual | ||||||
| 	std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | 		  << "\tTarget " << Tolerance << std::endl; | ||||||
|  |  | ||||||
|         std::cout << GridLogMessage << "Time breakdown "<<std::endl; |         std::cout << GridLogIterative << "Time breakdown "<<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tInner      " << InnerTimer.Elapsed() <<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | 	std::cout << GridLogIterative << "\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | ||||||
|  |  | ||||||
|         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); |         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); | ||||||
|  |  | ||||||
| 	IterationsToComplete = k;	 | 	IterationsToComplete = k;	 | ||||||
|  | 	TrueResidual = true_residual; | ||||||
|  |  | ||||||
|         return; |         return; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|     std::cout << GridLogMessage << "ConjugateGradient did NOT converge" |     // Failed. Calculate true residual before giving up                                                          | ||||||
|               << std::endl; |     Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||||
|  |     p = mmp - src; | ||||||
|  |  | ||||||
|  |     TrueResidual = sqrt(norm2(p)/ssq); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations<< std::endl; | ||||||
|  |  | ||||||
|     if (ErrorOnNoConverge) assert(0); |     if (ErrorOnNoConverge) assert(0); | ||||||
|     IterationsToComplete = k; |     IterationsToComplete = k; | ||||||
|  |  | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -28,10 +28,12 @@ Author: Christopher Kelly <ckelly@phys.columbia.edu> | |||||||
| #ifndef GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | #ifndef GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | ||||||
| #define GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | #define GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|   //Mixed precision restarted defect correction CG |   //Mixed precision restarted defect correction CG | ||||||
|   template<class FieldD,class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0,typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  |   template<class FieldD,class FieldF,  | ||||||
|  |     typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||||
|  |     typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||||
|   class MixedPrecisionConjugateGradient : public LinearFunction<FieldD> { |   class MixedPrecisionConjugateGradient : public LinearFunction<FieldD> { | ||||||
|   public:                                                 |   public:                                                 | ||||||
|     RealD   Tolerance; |     RealD   Tolerance; | ||||||
| @@ -50,7 +52,12 @@ namespace Grid { | |||||||
|     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess |     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||||
|     LinearFunction<FieldF> *guesser; |     LinearFunction<FieldF> *guesser; | ||||||
|      |      | ||||||
|     MixedPrecisionConjugateGradient(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid, LinearOperatorBase<FieldF> &_Linop_f, LinearOperatorBase<FieldD> &_Linop_d) : |     MixedPrecisionConjugateGradient(RealD tol,  | ||||||
|  | 				    Integer maxinnerit,  | ||||||
|  | 				    Integer maxouterit,  | ||||||
|  | 				    GridBase* _sp_grid,  | ||||||
|  | 				    LinearOperatorBase<FieldF> &_Linop_f,  | ||||||
|  | 				    LinearOperatorBase<FieldD> &_Linop_d) : | ||||||
|       Linop_f(_Linop_f), Linop_d(_Linop_d), |       Linop_f(_Linop_f), Linop_d(_Linop_d), | ||||||
|       Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), |       Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), | ||||||
|       OuterLoopNormMult(100.), guesser(NULL){ }; |       OuterLoopNormMult(100.), guesser(NULL){ }; | ||||||
| @@ -65,18 +72,18 @@ namespace Grid { | |||||||
|     GridStopWatch TotalTimer; |     GridStopWatch TotalTimer; | ||||||
|     TotalTimer.Start(); |     TotalTimer.Start(); | ||||||
|      |      | ||||||
|       int cb = src_d_in.checkerboard; |     int cb = src_d_in.Checkerboard(); | ||||||
|       sol_d.checkerboard = cb; |     sol_d.Checkerboard() = cb; | ||||||
|      |      | ||||||
|     RealD src_norm = norm2(src_d_in); |     RealD src_norm = norm2(src_d_in); | ||||||
|     RealD stop = src_norm * Tolerance*Tolerance; |     RealD stop = src_norm * Tolerance*Tolerance; | ||||||
|  |  | ||||||
|       GridBase* DoublePrecGrid = src_d_in._grid; |     GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||||
|     FieldD tmp_d(DoublePrecGrid); |     FieldD tmp_d(DoublePrecGrid); | ||||||
|       tmp_d.checkerboard = cb; |     tmp_d.Checkerboard() = cb; | ||||||
|      |      | ||||||
|     FieldD tmp2_d(DoublePrecGrid); |     FieldD tmp2_d(DoublePrecGrid); | ||||||
|       tmp2_d.checkerboard = cb; |     tmp2_d.Checkerboard() = cb; | ||||||
|      |      | ||||||
|     FieldD src_d(DoublePrecGrid); |     FieldD src_d(DoublePrecGrid); | ||||||
|     src_d = src_d_in; //source for next inner iteration, computed from residual during operation |     src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||||
| @@ -84,10 +91,10 @@ namespace Grid { | |||||||
|     RealD inner_tol = InnerTolerance; |     RealD inner_tol = InnerTolerance; | ||||||
|      |      | ||||||
|     FieldF src_f(SinglePrecGrid); |     FieldF src_f(SinglePrecGrid); | ||||||
|       src_f.checkerboard = cb; |     src_f.Checkerboard() = cb; | ||||||
|      |      | ||||||
|     FieldF sol_f(SinglePrecGrid); |     FieldF sol_f(SinglePrecGrid); | ||||||
|       sol_f.checkerboard = cb; |     sol_f.Checkerboard() = cb; | ||||||
|      |      | ||||||
|     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); |     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||||
|     CG_f.ErrorOnNoConverge = false; |     CG_f.ErrorOnNoConverge = false; | ||||||
| @@ -115,7 +122,7 @@ namespace Grid { | |||||||
|       precisionChange(src_f, src_d); |       precisionChange(src_f, src_d); | ||||||
|       PrecChangeTimer.Stop(); |       PrecChangeTimer.Stop(); | ||||||
|        |        | ||||||
| 	zeroit(sol_f); |       sol_f = Zero(); | ||||||
|  |  | ||||||
|       //Optionally improve inner solver guess (eg using known eigenvectors) |       //Optionally improve inner solver guess (eg using known eigenvectors) | ||||||
|       if(guesser != NULL) |       if(guesser != NULL) | ||||||
| @@ -149,6 +156,6 @@ namespace Grid { | |||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | #ifndef GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | ||||||
| #define GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | #define GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for iterative processes based on operators | // Base classes for iterative processes based on operators | ||||||
| @@ -41,22 +41,29 @@ namespace Grid { | |||||||
| 				    public OperatorFunction<Field> | 				    public OperatorFunction<Field> | ||||||
| { | { | ||||||
| public:                                                 | public:                                                 | ||||||
|  |  | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|   RealD   Tolerance; |   RealD   Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion |   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||||
|  |   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||||
|   int verbose; |   int verbose; | ||||||
|   MultiShiftFunction shifts; |   MultiShiftFunction shifts; | ||||||
|  |   std::vector<RealD> TrueResidualShift; | ||||||
|  |  | ||||||
|   ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :  |   ConjugateGradientMultiShift(Integer maxit,MultiShiftFunction &_shifts) :  | ||||||
|     MaxIterations(maxit), |     MaxIterations(maxit), | ||||||
|     shifts(_shifts) |     shifts(_shifts) | ||||||
|   {  |   {  | ||||||
|     verbose=1; |     verbose=1; | ||||||
|  |     IterationsToCompleteShift.resize(_shifts.order); | ||||||
|  |     TrueResidualShift.resize(_shifts.order); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) |   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||||
|   { |   { | ||||||
|   GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|     int nshift = shifts.order; |     int nshift = shifts.order; | ||||||
|     std::vector<Field> results(nshift,grid); |     std::vector<Field> results(nshift,grid); | ||||||
|     (*this)(Linop,src,results,psi); |     (*this)(Linop,src,results,psi); | ||||||
| @@ -78,7 +85,7 @@ void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector | |||||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &psi) |   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &psi) | ||||||
|   { |   { | ||||||
|    |    | ||||||
|   GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|    |    | ||||||
|     //////////////////////////////////////////////////////////////////////// |     //////////////////////////////////////////////////////////////////////// | ||||||
|     // Convenience references to the info stored in "MultiShiftFunction" |     // Convenience references to the info stored in "MultiShiftFunction" | ||||||
| @@ -122,6 +129,17 @@ void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector | |||||||
|     // Residuals "r" are src |     // Residuals "r" are src | ||||||
|     // First search direction "p" is also src |     // First search direction "p" is also src | ||||||
|     cp = norm2(src); |     cp = norm2(src); | ||||||
|  |  | ||||||
|  |     // Handle trivial case of zero src. | ||||||
|  |     if( cp == 0. ){ | ||||||
|  |       for(int s=0;s<nshift;s++){ | ||||||
|  | 	psi[s] = Zero(); | ||||||
|  | 	IterationsToCompleteShift[s] = 1; | ||||||
|  | 	TrueResidualShift[s] = 0.; | ||||||
|  |       } | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|     for(int s=0;s<nshift;s++){ |     for(int s=0;s<nshift;s++){ | ||||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; |       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s |       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s | ||||||
| @@ -267,6 +285,7 @@ void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector | |||||||
|       for(int s=0;s<nshift;s++){ |       for(int s=0;s<nshift;s++){ | ||||||
|        |        | ||||||
| 	if ( (!converged[s]) ){ | 	if ( (!converged[s]) ){ | ||||||
|  | 	  IterationsToCompleteShift[s] = k; | ||||||
| 	 | 	 | ||||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||||
| 	 | 	 | ||||||
| @@ -296,7 +315,8 @@ void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector | |||||||
| 	  axpy(r,-alpha[s],src,tmp); | 	  axpy(r,-alpha[s],src,tmp); | ||||||
| 	  RealD rn = norm2(r); | 	  RealD rn = norm2(r); | ||||||
| 	  RealD cn = norm2(src); | 	  RealD cn = norm2(src); | ||||||
| 	std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<<std::sqrt(rn/cn)<<std::endl; | 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||||
|  | 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl; | ||||||
| 	} | 	} | ||||||
|  |  | ||||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; |       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||||
| @@ -318,5 +338,5 @@ void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector | |||||||
|   } |   } | ||||||
|  |  | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -28,9 +28,11 @@ Author: Christopher Kelly <ckelly@phys.columbia.edu> | |||||||
| #ifndef GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | #ifndef GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | ||||||
| #define GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | #define GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|   template<class FieldD,class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0,typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | template<class FieldD,class FieldF,  | ||||||
|  | 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||||
|  | 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||||
| class ConjugateGradientReliableUpdate : public LinearFunction<FieldD> { | class ConjugateGradientReliableUpdate : public LinearFunction<FieldD> { | ||||||
| public: | public: | ||||||
|   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. |   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||||
| @@ -74,7 +76,7 @@ namespace Grid { | |||||||
|     LinearOperatorBase<FieldF> *Linop_f_use = &Linop_f; |     LinearOperatorBase<FieldF> *Linop_f_use = &Linop_f; | ||||||
|     bool using_fallback = false; |     bool using_fallback = false; | ||||||
|        |        | ||||||
|       psi.checkerboard = src.checkerboard; |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|     conformable(psi, src); |     conformable(psi, src); | ||||||
|  |  | ||||||
|     RealD cp, c, a, d, b, ssq, qq, b_pred; |     RealD cp, c, a, d, b, ssq, qq, b_pred; | ||||||
| @@ -108,17 +110,17 @@ namespace Grid { | |||||||
|     // Check if guess is really REALLY good :) |     // Check if guess is really REALLY good :) | ||||||
|     if (cp <= rsq) { |     if (cp <= rsq) { | ||||||
|       std::cout << GridLogMessage << "ConjugateGradientReliableUpdate guess was REALLY good\n"; |       std::cout << GridLogMessage << "ConjugateGradientReliableUpdate guess was REALLY good\n"; | ||||||
| 	std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp / ssq)<<std::endl; |       std::cout << GridLogMessage << "\tComputed residual " << std::sqrt(cp / ssq)<<std::endl; | ||||||
|       return; |       return; | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     //Single prec initialization |     //Single prec initialization | ||||||
|     FieldF r_f(SinglePrecGrid); |     FieldF r_f(SinglePrecGrid); | ||||||
|       r_f.checkerboard = r.checkerboard; |     r_f.Checkerboard() = r.Checkerboard(); | ||||||
|     precisionChange(r_f, r); |     precisionChange(r_f, r); | ||||||
|  |  | ||||||
|     FieldF psi_f(r_f); |     FieldF psi_f(r_f); | ||||||
|       psi_f = zero; |     psi_f = Zero(); | ||||||
|  |  | ||||||
|     FieldF p_f(r_f); |     FieldF p_f(r_f); | ||||||
|     FieldF mmp_f(r_f); |     FieldF mmp_f(r_f); | ||||||
| @@ -178,12 +180,12 @@ namespace Grid { | |||||||
| 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | ||||||
| 	p = mmp - src; | 	p = mmp - src; | ||||||
|  |  | ||||||
| 	  RealD srcnorm = sqrt(norm2(src)); | 	RealD srcnorm = std::sqrt(norm2(src)); | ||||||
| 	  RealD resnorm = sqrt(norm2(p)); | 	RealD resnorm = std::sqrt(norm2(p)); | ||||||
| 	RealD true_residual = resnorm / srcnorm; | 	RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate Converged on iteration " << k << " after " << l << " reliable updates" << std::endl; | 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate Converged on iteration " << k << " after " << l << " reliable updates" << std::endl; | ||||||
| 	  std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp / ssq)<<std::endl; | 	std::cout << GridLogMessage << "\tComputed residual " << std::sqrt(cp / ssq)<<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tTrue residual " << true_residual<<std::endl; | 	std::cout << GridLogMessage << "\tTrue residual " << true_residual<<std::endl; | ||||||
| 	std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | 	std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||||
|  |  | ||||||
| @@ -217,7 +219,7 @@ namespace Grid { | |||||||
| 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | ||||||
| 	r = src - mmp; | 	r = src - mmp; | ||||||
|  |  | ||||||
| 	  psi_f = zero; | 	psi_f = Zero(); | ||||||
| 	precisionChange(r_f, r); | 	precisionChange(r_f, r); | ||||||
| 	cp = norm2(r); | 	cp = norm2(r); | ||||||
| 	MaxResidSinceLastRelUp = cp; | 	MaxResidSinceLastRelUp = cp; | ||||||
| @@ -249,7 +251,7 @@ namespace Grid { | |||||||
| }; | }; | ||||||
|  |  | ||||||
|  |  | ||||||
| }; | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_CONJUGATE_RESIDUAL_H | #ifndef GRID_CONJUGATE_RESIDUAL_H | ||||||
| #define GRID_CONJUGATE_RESIDUAL_H | #define GRID_CONJUGATE_RESIDUAL_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for iterative processes based on operators | // Base classes for iterative processes based on operators | ||||||
| @@ -39,6 +39,8 @@ namespace Grid { | |||||||
| template<class Field>  | template<class Field>  | ||||||
| class ConjugateResidual : public OperatorFunction<Field> { | class ConjugateResidual : public OperatorFunction<Field> { | ||||||
| public:                                                 | public:                                                 | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|   RealD   Tolerance; |   RealD   Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   int verbose; |   int verbose; | ||||||
| @@ -49,14 +51,14 @@ namespace Grid { | |||||||
|  |  | ||||||
|   void operator() (LinearOperatorBase<Field> &Linop,const Field &src, Field &psi){ |   void operator() (LinearOperatorBase<Field> &Linop,const Field &src, Field &psi){ | ||||||
|  |  | ||||||
|       RealD a, b, c, d; |     RealD a, b; // c, d; | ||||||
|     RealD cp, ssq,rsq; |     RealD cp, ssq,rsq; | ||||||
|        |        | ||||||
|     RealD rAr, rAAr, rArp; |     RealD rAr, rAAr, rArp; | ||||||
|     RealD pAp, pAAp; |     RealD pAp, pAAp; | ||||||
|  |  | ||||||
|       GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|       psi=zero; |     psi=Zero(); | ||||||
|     Field r(grid),  p(grid), Ap(grid), Ar(grid); |     Field r(grid),  p(grid), Ap(grid), Ar(grid); | ||||||
|        |        | ||||||
|     r=src; |     r=src; | ||||||
| @@ -95,8 +97,8 @@ namespace Grid { | |||||||
| 	axpy(r,-1.0,src,Ap); | 	axpy(r,-1.0,src,Ap); | ||||||
| 	RealD true_resid = norm2(r)/ssq; | 	RealD true_resid = norm2(r)/ssq; | ||||||
| 	std::cout<<GridLogMessage<<"ConjugateResidual: Converged on iteration " <<k | 	std::cout<<GridLogMessage<<"ConjugateResidual: Converged on iteration " <<k | ||||||
| 		   << " computed residual "<<sqrt(cp/ssq) | 		 << " computed residual "<<std::sqrt(cp/ssq) | ||||||
| 	           << " true residual "<<sqrt(true_resid) | 		 << " true residual "<<std::sqrt(true_resid) | ||||||
| 		 << " target "       <<Tolerance <<std::endl; | 		 << " target "       <<Tolerance <<std::endl; | ||||||
| 	return; | 	return; | ||||||
|       } |       } | ||||||
| @@ -107,5 +109,5 @@ namespace Grid { | |||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -33,9 +33,13 @@ namespace Grid { | |||||||
| template<class Field> | template<class Field> | ||||||
| class ZeroGuesser: public LinearFunction<Field> { | class ZeroGuesser: public LinearFunction<Field> { | ||||||
| public: | public: | ||||||
|   virtual void operator()(const Field &src, Field &guess) { guess = zero; }; |     virtual void operator()(const Field &src, Field &guess) { guess = Zero(); }; | ||||||
|  | }; | ||||||
|  | template<class Field> | ||||||
|  | class DoNothingGuesser: public LinearFunction<Field> { | ||||||
|  | public: | ||||||
|  |   virtual void operator()(const Field &src, Field &guess) {  }; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class Field> | template<class Field> | ||||||
| class SourceGuesser: public LinearFunction<Field> { | class SourceGuesser: public LinearFunction<Field> { | ||||||
| public: | public: | ||||||
| @@ -56,14 +60,14 @@ public: | |||||||
|   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) : evec(_evec), eval(_eval) {}; |   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) : evec(_evec), eval(_eval) {}; | ||||||
|  |  | ||||||
|   virtual void operator()(const Field &src,Field &guess) { |   virtual void operator()(const Field &src,Field &guess) { | ||||||
|     guess = zero; |     guess = Zero(); | ||||||
|     assert(evec.size()==eval.size()); |     assert(evec.size()==eval.size()); | ||||||
|     auto N = evec.size(); |     auto N = evec.size(); | ||||||
|     for (int i=0;i<N;i++) { |     for (int i=0;i<N;i++) { | ||||||
|       const Field& tmp = evec[i]; |       const Field& tmp = evec[i]; | ||||||
|       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); |       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); | ||||||
|     } |     } | ||||||
|     guess.checkerboard = src.checkerboard; |     guess.Checkerboard() = src.Checkerboard(); | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -86,15 +90,15 @@ public: | |||||||
|    |    | ||||||
|   void operator()(const FineField &src,FineField &guess) {  |   void operator()(const FineField &src,FineField &guess) {  | ||||||
|     int N = (int)evec_coarse.size(); |     int N = (int)evec_coarse.size(); | ||||||
|     CoarseField src_coarse(evec_coarse[0]._grid); |     CoarseField src_coarse(evec_coarse[0].Grid()); | ||||||
|     CoarseField guess_coarse(evec_coarse[0]._grid);    guess_coarse = zero; |     CoarseField guess_coarse(evec_coarse[0].Grid());    guess_coarse = Zero(); | ||||||
|     blockProject(src_coarse,src,subspace);     |     blockProject(src_coarse,src,subspace);     | ||||||
|     for (int i=0;i<N;i++) { |     for (int i=0;i<N;i++) { | ||||||
|       const CoarseField & tmp = evec_coarse[i]; |       const CoarseField & tmp = evec_coarse[i]; | ||||||
|       axpy(guess_coarse,TensorRemove(innerProduct(tmp,src_coarse)) / eval_coarse[i],tmp,guess_coarse); |       axpy(guess_coarse,TensorRemove(innerProduct(tmp,src_coarse)) / eval_coarse[i],tmp,guess_coarse); | ||||||
|     } |     } | ||||||
|     blockPromote(guess_coarse,guess,subspace); |     blockPromote(guess_coarse,guess,subspace); | ||||||
|     guess.checkerboard = src.checkerboard; |     guess.Checkerboard() = src.Checkerboard(); | ||||||
|   }; |   }; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|   | |||||||
| @@ -0,0 +1,258 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/FlexibleCommunicationAvoidingGeneralisedMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class FlexibleCommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // Throw an assert when FCAGMRES fails to converge, | ||||||
|  |                           // defaults to true | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |  | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer RestartLength; | ||||||
|  |   Integer MaxNumberOfRestarts; | ||||||
|  |   Integer IterationCount; // Number of iterations the FCAGMRES took to finish, | ||||||
|  |                           // filled in upon completion | ||||||
|  |  | ||||||
|  |   GridStopWatch MatrixTimer; | ||||||
|  |   GridStopWatch PrecTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |   GridStopWatch QrTimer; | ||||||
|  |   GridStopWatch CompSolutionTimer; | ||||||
|  |  | ||||||
|  |   Eigen::MatrixXcd H; | ||||||
|  |  | ||||||
|  |   std::vector<ComplexD> y; | ||||||
|  |   std::vector<ComplexD> gamma; | ||||||
|  |   std::vector<ComplexD> c; | ||||||
|  |   std::vector<ComplexD> s; | ||||||
|  |  | ||||||
|  |   LinearFunction<Field> &Preconditioner; | ||||||
|  |  | ||||||
|  |   FlexibleCommunicationAvoidingGeneralisedMinimalResidual(RealD   tol, | ||||||
|  |                                                           Integer maxit, | ||||||
|  |                                                           LinearFunction<Field> &Prec, | ||||||
|  |                                                           Integer restart_length, | ||||||
|  |                                                           bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , RestartLength(restart_length) | ||||||
|  |       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv) | ||||||
|  |       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||||
|  |       , y(RestartLength + 1, 0.) | ||||||
|  |       , gamma(RestartLength + 1, 0.) | ||||||
|  |       , c(RestartLength + 1, 0.) | ||||||
|  |       , s(RestartLength + 1, 0.) | ||||||
|  |       , Preconditioner(Prec) {}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular FGMRES" << std::endl; | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||||
|  |  | ||||||
|  |     PrecTimer.Reset(); | ||||||
|  |     MatrixTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |     QrTimer.Reset(); | ||||||
|  |     CompSolutionTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     IterationCount = 0; | ||||||
|  |  | ||||||
|  |     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||||
|  |  | ||||||
|  |       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |  | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinOp.Op(psi,r); | ||||||
|  |         axpy(r,-1.0,src,r); | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Precon  " <<         PrecTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FCAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||||
|  |  | ||||||
|  |     RealD cp = 0; | ||||||
|  |  | ||||||
|  |     Field w(src.Grid()); | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     // these should probably be made class members so that they are only allocated once, not in every restart | ||||||
|  |     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||||
|  |     std::vector<Field> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(psi, w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r = src - w; | ||||||
|  |  | ||||||
|  |     gamma[0] = sqrt(norm2(r)); | ||||||
|  |  | ||||||
|  |     v[0] = (1. / gamma[0]) * r; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for (int i=0; i<RestartLength; i++) { | ||||||
|  |  | ||||||
|  |       IterationCount++; | ||||||
|  |  | ||||||
|  |       arnoldiStep(LinOp, v, z, w, i); | ||||||
|  |  | ||||||
|  |       qrUpdate(i); | ||||||
|  |  | ||||||
|  |       cp = norm(gamma[i+1]); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||||
|  |  | ||||||
|  |         computeSolution(z, psi, i); | ||||||
|  |  | ||||||
|  |         return cp; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     assert(0); // Never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) { | ||||||
|  |  | ||||||
|  |     PrecTimer.Start(); | ||||||
|  |     Preconditioner(v[iter], z[iter]); | ||||||
|  |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(z[iter], w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     for (int i = 0; i <= iter; ++i) { | ||||||
|  |       H(iter, i) = innerProduct(v[i], w); | ||||||
|  |       w = w - ComplexD(H(iter, i)) * v[i]; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     H(iter, iter + 1) = sqrt(norm2(w)); | ||||||
|  |     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void qrUpdate(int iter) { | ||||||
|  |  | ||||||
|  |     QrTimer.Start(); | ||||||
|  |     for (int i = 0; i < iter ; ++i) { | ||||||
|  |       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i + 1) = tmp; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     // Compute new Givens Rotation | ||||||
|  |     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||||
|  |     c[iter]     = H(iter, iter) / nu; | ||||||
|  |     s[iter]     = H(iter, iter + 1) / nu; | ||||||
|  |  | ||||||
|  |     // Apply new Givens rotation | ||||||
|  |     H(iter, iter)     = nu; | ||||||
|  |     H(iter, iter + 1) = 0.; | ||||||
|  |  | ||||||
|  |     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||||
|  |     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||||
|  |     QrTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void computeSolution(std::vector<Field> const &z, Field &psi, int iter) { | ||||||
|  |  | ||||||
|  |     CompSolutionTimer.Start(); | ||||||
|  |     for (int i = iter; i >= 0; i--) { | ||||||
|  |       y[i] = gamma[i]; | ||||||
|  |       for (int k = i + 1; k <= iter; k++) | ||||||
|  |         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||||
|  |       y[i] = y[i] / ComplexD(H(i, i)); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     for (int i = 0; i <= iter; i++) | ||||||
|  |       psi = psi + z[i] * y[i]; | ||||||
|  |     CompSolutionTimer.Stop(); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
|  | #endif | ||||||
							
								
								
									
										256
									
								
								Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										256
									
								
								Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,256 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class FlexibleGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // Throw an assert when FGMRES fails to converge, | ||||||
|  |                           // defaults to true | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |  | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer RestartLength; | ||||||
|  |   Integer MaxNumberOfRestarts; | ||||||
|  |   Integer IterationCount; // Number of iterations the FGMRES took to finish, | ||||||
|  |                           // filled in upon completion | ||||||
|  |  | ||||||
|  |   GridStopWatch MatrixTimer; | ||||||
|  |   GridStopWatch PrecTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |   GridStopWatch QrTimer; | ||||||
|  |   GridStopWatch CompSolutionTimer; | ||||||
|  |  | ||||||
|  |   Eigen::MatrixXcd H; | ||||||
|  |  | ||||||
|  |   std::vector<ComplexD> y; | ||||||
|  |   std::vector<ComplexD> gamma; | ||||||
|  |   std::vector<ComplexD> c; | ||||||
|  |   std::vector<ComplexD> s; | ||||||
|  |  | ||||||
|  |   LinearFunction<Field> &Preconditioner; | ||||||
|  |  | ||||||
|  |   FlexibleGeneralisedMinimalResidual(RealD   tol, | ||||||
|  |                                      Integer maxit, | ||||||
|  |                                      LinearFunction<Field> &Prec, | ||||||
|  |                                      Integer restart_length, | ||||||
|  |                                      bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , RestartLength(restart_length) | ||||||
|  |       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv) | ||||||
|  |       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||||
|  |       , y(RestartLength + 1, 0.) | ||||||
|  |       , gamma(RestartLength + 1, 0.) | ||||||
|  |       , c(RestartLength + 1, 0.) | ||||||
|  |       , s(RestartLength + 1, 0.) | ||||||
|  |       , Preconditioner(Prec) {}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||||
|  |  | ||||||
|  |     PrecTimer.Reset(); | ||||||
|  |     MatrixTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |     QrTimer.Reset(); | ||||||
|  |     CompSolutionTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     IterationCount = 0; | ||||||
|  |  | ||||||
|  |     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||||
|  |  | ||||||
|  |       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |  | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinOp.Op(psi,r); | ||||||
|  |         axpy(r,-1.0,src,r); | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "FlexibleGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: Precon  " <<         PrecTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "FGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "FlexibleGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||||
|  |  | ||||||
|  |     RealD cp = 0; | ||||||
|  |  | ||||||
|  |     Field w(src.Grid()); | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     // these should probably be made class members so that they are only allocated once, not in every restart | ||||||
|  |     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||||
|  |     std::vector<Field> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(psi, w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r = src - w; | ||||||
|  |  | ||||||
|  |     gamma[0] = sqrt(norm2(r)); | ||||||
|  |  | ||||||
|  |     v[0] = (1. / gamma[0]) * r; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for (int i=0; i<RestartLength; i++) { | ||||||
|  |  | ||||||
|  |       IterationCount++; | ||||||
|  |  | ||||||
|  |       arnoldiStep(LinOp, v, z, w, i); | ||||||
|  |  | ||||||
|  |       qrUpdate(i); | ||||||
|  |  | ||||||
|  |       cp = norm(gamma[i+1]); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: Iteration " << IterationCount | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||||
|  |  | ||||||
|  |         computeSolution(z, psi, i); | ||||||
|  |  | ||||||
|  |         return cp; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     assert(0); // Never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) { | ||||||
|  |  | ||||||
|  |     PrecTimer.Start(); | ||||||
|  |     Preconditioner(v[iter], z[iter]); | ||||||
|  |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(z[iter], w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     for (int i = 0; i <= iter; ++i) { | ||||||
|  |       H(iter, i) = innerProduct(v[i], w); | ||||||
|  |       w = w - ComplexD(H(iter, i)) * v[i]; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     H(iter, iter + 1) = sqrt(norm2(w)); | ||||||
|  |     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void qrUpdate(int iter) { | ||||||
|  |  | ||||||
|  |     QrTimer.Start(); | ||||||
|  |     for (int i = 0; i < iter ; ++i) { | ||||||
|  |       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i + 1) = tmp; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     // Compute new Givens Rotation | ||||||
|  |     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||||
|  |     c[iter]     = H(iter, iter) / nu; | ||||||
|  |     s[iter]     = H(iter, iter + 1) / nu; | ||||||
|  |  | ||||||
|  |     // Apply new Givens rotation | ||||||
|  |     H(iter, iter)     = nu; | ||||||
|  |     H(iter, iter + 1) = 0.; | ||||||
|  |  | ||||||
|  |     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||||
|  |     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||||
|  |     QrTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void computeSolution(std::vector<Field> const &z, Field &psi, int iter) { | ||||||
|  |  | ||||||
|  |     CompSolutionTimer.Start(); | ||||||
|  |     for (int i = iter; i >= 0; i--) { | ||||||
|  |       y[i] = gamma[i]; | ||||||
|  |       for (int k = i + 1; k <= iter; k++) | ||||||
|  |         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||||
|  |       y[i] = y[i] / ComplexD(H(i, i)); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     for (int i = 0; i <= iter; i++) | ||||||
|  |       psi = psi + z[i] * y[i]; | ||||||
|  |     CompSolutionTimer.Stop(); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
|  | #endif | ||||||
							
								
								
									
										244
									
								
								Grid/algorithms/iterative/GeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										244
									
								
								Grid/algorithms/iterative/GeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,244 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/GeneralisedMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class GeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // Throw an assert when GMRES fails to converge, | ||||||
|  |                           // defaults to true | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |  | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer RestartLength; | ||||||
|  |   Integer MaxNumberOfRestarts; | ||||||
|  |   Integer IterationCount; // Number of iterations the GMRES took to finish, | ||||||
|  |                           // filled in upon completion | ||||||
|  |  | ||||||
|  |   GridStopWatch MatrixTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |   GridStopWatch QrTimer; | ||||||
|  |   GridStopWatch CompSolutionTimer; | ||||||
|  |  | ||||||
|  |   Eigen::MatrixXcd H; | ||||||
|  |  | ||||||
|  |   std::vector<ComplexD> y; | ||||||
|  |   std::vector<ComplexD> gamma; | ||||||
|  |   std::vector<ComplexD> c; | ||||||
|  |   std::vector<ComplexD> s; | ||||||
|  |  | ||||||
|  |   GeneralisedMinimalResidual(RealD   tol, | ||||||
|  |                              Integer maxit, | ||||||
|  |                              Integer restart_length, | ||||||
|  |                              bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , RestartLength(restart_length) | ||||||
|  |       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv) | ||||||
|  |       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||||
|  |       , y(RestartLength + 1, 0.) | ||||||
|  |       , gamma(RestartLength + 1, 0.) | ||||||
|  |       , c(RestartLength + 1, 0.) | ||||||
|  |       , s(RestartLength + 1, 0.) {}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "GeneralisedMinimalResidual: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "GeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||||
|  |  | ||||||
|  |     MatrixTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |     QrTimer.Reset(); | ||||||
|  |     CompSolutionTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     IterationCount = 0; | ||||||
|  |  | ||||||
|  |     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||||
|  |  | ||||||
|  |       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |  | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinOp.Op(psi,r); | ||||||
|  |         axpy(r,-1.0,src,r); | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "GeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "GMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "GMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "GMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "GMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "GMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "GeneralisedMinimalResidual did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||||
|  |  | ||||||
|  |     RealD cp = 0; | ||||||
|  |  | ||||||
|  |     Field w(src.Grid()); | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     // this should probably be made a class member so that it is only allocated once, not in every restart | ||||||
|  |     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(psi, w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r = src - w; | ||||||
|  |  | ||||||
|  |     gamma[0] = sqrt(norm2(r)); | ||||||
|  |  | ||||||
|  |     v[0] = (1. / gamma[0]) * r; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for (int i=0; i<RestartLength; i++) { | ||||||
|  |  | ||||||
|  |       IterationCount++; | ||||||
|  |  | ||||||
|  |       arnoldiStep(LinOp, v, w, i); | ||||||
|  |  | ||||||
|  |       qrUpdate(i); | ||||||
|  |  | ||||||
|  |       cp = norm(gamma[i+1]); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "GeneralisedMinimalResidual: Iteration " << IterationCount | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||||
|  |  | ||||||
|  |         computeSolution(v, psi, i); | ||||||
|  |  | ||||||
|  |         return cp; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     assert(0); // Never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) { | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(v[iter], w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     for (int i = 0; i <= iter; ++i) { | ||||||
|  |       H(iter, i) = innerProduct(v[i], w); | ||||||
|  |       w = w - ComplexD(H(iter, i)) * v[i]; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     H(iter, iter + 1) = sqrt(norm2(w)); | ||||||
|  |     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void qrUpdate(int iter) { | ||||||
|  |  | ||||||
|  |     QrTimer.Start(); | ||||||
|  |     for (int i = 0; i < iter ; ++i) { | ||||||
|  |       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i + 1) = tmp; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     // Compute new Givens Rotation | ||||||
|  |     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||||
|  |     c[iter]     = H(iter, iter) / nu; | ||||||
|  |     s[iter]     = H(iter, iter + 1) / nu; | ||||||
|  |  | ||||||
|  |     // Apply new Givens rotation | ||||||
|  |     H(iter, iter)     = nu; | ||||||
|  |     H(iter, iter + 1) = 0.; | ||||||
|  |  | ||||||
|  |     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||||
|  |     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||||
|  |     QrTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void computeSolution(std::vector<Field> const &v, Field &psi, int iter) { | ||||||
|  |  | ||||||
|  |     CompSolutionTimer.Start(); | ||||||
|  |     for (int i = iter; i >= 0; i--) { | ||||||
|  |       y[i] = gamma[i]; | ||||||
|  |       for (int k = i + 1; k <= iter; k++) | ||||||
|  |         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||||
|  |       y[i] = y[i] / ComplexD(H(i, i)); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     for (int i = 0; i <= iter; i++) | ||||||
|  |       psi = psi + v[i] * y[i]; | ||||||
|  |     CompSolutionTimer.Stop(); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
|  | #endif | ||||||
| @@ -35,120 +35,7 @@ Author: Christoph Lehner <clehner@bnl.gov> | |||||||
| //#include <zlib.h> | //#include <zlib.h> | ||||||
| #include <sys/stat.h> | #include <sys/stat.h> | ||||||
|  |  | ||||||
| namespace Grid {  | NAMESPACE_BEGIN(Grid);  | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////// |  | ||||||
|   // Move following 100 LOC to lattice/Lattice_basis.h |  | ||||||
|   //////////////////////////////////////////////////////// |  | ||||||
| template<class Field> |  | ||||||
| void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  |  | ||||||
| { |  | ||||||
|   for(int j=0; j<k; ++j){ |  | ||||||
|     auto ip = innerProduct(basis[j],w); |  | ||||||
|     w = w - ip*basis[j]; |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisRotate(std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j0, int j1, int k0,int k1,int Nm)  |  | ||||||
| { |  | ||||||
|   typedef typename Field::vector_object vobj; |  | ||||||
|   GridBase* grid = basis[0]._grid; |  | ||||||
|        |  | ||||||
|   parallel_region |  | ||||||
|   { |  | ||||||
|  |  | ||||||
|     std::vector < vobj , commAllocator<vobj> > B(Nm); // Thread private |  | ||||||
|         |  | ||||||
|     parallel_for_internal(int ss=0;ss < grid->oSites();ss++){ |  | ||||||
|       for(int j=j0; j<j1; ++j) B[j]=0.; |  | ||||||
|        |  | ||||||
|       for(int j=j0; j<j1; ++j){ |  | ||||||
| 	for(int k=k0; k<k1; ++k){ |  | ||||||
| 	  B[j] +=Qt(j,k) * basis[k]._odata[ss]; |  | ||||||
| 	} |  | ||||||
|       } |  | ||||||
|       for(int j=j0; j<j1; ++j){ |  | ||||||
| 	  basis[j]._odata[ss] = B[j]; |  | ||||||
|       } |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| // Extract a single rotated vector |  | ||||||
| template<class Field> |  | ||||||
| void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  |  | ||||||
| { |  | ||||||
|   typedef typename Field::vector_object vobj; |  | ||||||
|   GridBase* grid = basis[0]._grid; |  | ||||||
|  |  | ||||||
|   result.checkerboard = basis[0].checkerboard; |  | ||||||
|   parallel_for(int ss=0;ss < grid->oSites();ss++){ |  | ||||||
|     vobj B = zero; |  | ||||||
|     for(int k=k0; k<k1; ++k){ |  | ||||||
|       B +=Qt(j,k) * basis[k]._odata[ss]; |  | ||||||
|     } |  | ||||||
|     result._odata[ss] = B; |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  |  | ||||||
| { |  | ||||||
|   int vlen = idx.size(); |  | ||||||
|  |  | ||||||
|   assert(vlen>=1); |  | ||||||
|   assert(vlen<=sort_vals.size()); |  | ||||||
|   assert(vlen<=_v.size()); |  | ||||||
|  |  | ||||||
|   for (size_t i=0;i<vlen;i++) { |  | ||||||
|  |  | ||||||
|     if (idx[i] != i) { |  | ||||||
|  |  | ||||||
|       ////////////////////////////////////// |  | ||||||
|       // idx[i] is a table of desired sources giving a permutation. |  | ||||||
|       // Swap v[i] with v[idx[i]]. |  | ||||||
|       // Find  j>i for which _vnew[j] = _vold[i], |  | ||||||
|       // track the move idx[j] => idx[i] |  | ||||||
|       // track the move idx[i] => i |  | ||||||
|       ////////////////////////////////////// |  | ||||||
|       size_t j; |  | ||||||
|       for (j=i;j<idx.size();j++) |  | ||||||
| 	if (idx[j]==i) |  | ||||||
| 	  break; |  | ||||||
|  |  | ||||||
|       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); |  | ||||||
|  |  | ||||||
|       std::swap(_v[i]._odata,_v[idx[i]]._odata); // should use vector move constructor, no data copy |  | ||||||
|       std::swap(sort_vals[i],sort_vals[idx[i]]); |  | ||||||
|  |  | ||||||
|       idx[j] = idx[i]; |  | ||||||
|       idx[i] = i; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
| inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  |  | ||||||
| { |  | ||||||
|   std::vector<int> idx(sort_vals.size()); |  | ||||||
|   std::iota(idx.begin(), idx.end(), 0); |  | ||||||
|  |  | ||||||
|   // sort indexes based on comparing values in v |  | ||||||
|   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { |  | ||||||
|     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); |  | ||||||
|   }); |  | ||||||
|   return idx; |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class Field> |  | ||||||
| void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  |  | ||||||
| { |  | ||||||
|   std::vector<int> idx = basisSortGetIndex(sort_vals); |  | ||||||
|   if (reverse) |  | ||||||
|     std::reverse(idx.begin(), idx.end()); |  | ||||||
|    |  | ||||||
|   basisReorderInPlace(_v,sort_vals,idx); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Implicitly restarted lanczos | // Implicitly restarted lanczos | ||||||
| @@ -259,7 +146,7 @@ public: | |||||||
| 			    RealD _eresid, // resid in lmdue deficit  | 			    RealD _eresid, // resid in lmdue deficit  | ||||||
| 			    int _MaxIter, // Max iterations | 			    int _MaxIter, // Max iterations | ||||||
| 			    RealD _betastp=0.0, // if beta(k) < betastp: converged | 			    RealD _betastp=0.0, // if beta(k) < betastp: converged | ||||||
| 			    int _MinRestart=1, int _orth_period = 1, | 			    int _MinRestart=0, int _orth_period = 1, | ||||||
| 			    IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | 			    IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | ||||||
|     SimpleTester(HermOp), _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(Tester), |     SimpleTester(HermOp), _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(Tester), | ||||||
|     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), |     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), | ||||||
| @@ -275,7 +162,7 @@ public: | |||||||
| 			       RealD _eresid, // resid in lmdue deficit  | 			       RealD _eresid, // resid in lmdue deficit  | ||||||
| 			       int _MaxIter, // Max iterations | 			       int _MaxIter, // Max iterations | ||||||
| 			       RealD _betastp=0.0, // if beta(k) < betastp: converged | 			       RealD _betastp=0.0, // if beta(k) < betastp: converged | ||||||
| 			       int _MinRestart=1, int _orth_period = 1, | 			       int _MinRestart=0, int _orth_period = 1, | ||||||
| 			       IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | 			       IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | ||||||
|     SimpleTester(HermOp),  _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(SimpleTester), |     SimpleTester(HermOp),  _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(SimpleTester), | ||||||
|     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), |     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), | ||||||
| @@ -289,7 +176,7 @@ public: | |||||||
|   template<typename T>  static RealD normalise(T& v)  |   template<typename T>  static RealD normalise(T& v)  | ||||||
|   { |   { | ||||||
|     RealD nn = norm2(v); |     RealD nn = norm2(v); | ||||||
|     nn = sqrt(nn); |     nn = std::sqrt(nn); | ||||||
|     v = v * (1.0/nn); |     v = v * (1.0/nn); | ||||||
|     return nn; |     return nn; | ||||||
|   } |   } | ||||||
| @@ -321,10 +208,10 @@ until convergence | |||||||
| */ | */ | ||||||
|   void calc(std::vector<RealD>& eval, std::vector<Field>& evec,  const Field& src, int& Nconv, bool reverse=false) |   void calc(std::vector<RealD>& eval, std::vector<Field>& evec,  const Field& src, int& Nconv, bool reverse=false) | ||||||
|   { |   { | ||||||
|     GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|     assert(grid == evec[0]._grid); |     assert(grid == evec[0].Grid()); | ||||||
|      |      | ||||||
|     GridLogIRL.TimingMode(1); |     //    GridLogIRL.TimingMode(1); | ||||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; |     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||||
|     std::cout << GridLogIRL <<" ImplicitlyRestartedLanczos::calc() starting iteration 0 /  "<< MaxIter<< std::endl; |     std::cout << GridLogIRL <<" ImplicitlyRestartedLanczos::calc() starting iteration 0 /  "<< MaxIter<< std::endl; | ||||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; |     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||||
| @@ -349,14 +236,17 @@ until convergence | |||||||
|     { |     { | ||||||
|       auto src_n = src; |       auto src_n = src; | ||||||
|       auto tmp = src; |       auto tmp = src; | ||||||
|  |       std::cout << GridLogIRL << " IRL source norm " << norm2(src) << std::endl; | ||||||
|       const int _MAX_ITER_IRL_MEVAPP_ = 50; |       const int _MAX_ITER_IRL_MEVAPP_ = 50; | ||||||
|       for (int i=0;i<_MAX_ITER_IRL_MEVAPP_;i++) { |       for (int i=0;i<_MAX_ITER_IRL_MEVAPP_;i++) { | ||||||
| 	normalise(src_n); | 	normalise(src_n); | ||||||
| 	_HermOp(src_n,tmp); | 	_HermOp(src_n,tmp); | ||||||
|  | 	//	std::cout << GridLogMessage<< tmp<<std::endl; exit(0); | ||||||
|  | 	//	std::cout << GridLogIRL << " _HermOp " << norm2(tmp) << std::endl; | ||||||
| 	RealD vnum = real(innerProduct(src_n,tmp)); // HermOp. | 	RealD vnum = real(innerProduct(src_n,tmp)); // HermOp. | ||||||
| 	RealD vden = norm2(src_n); | 	RealD vden = norm2(src_n); | ||||||
| 	RealD na = vnum/vden; | 	RealD na = vnum/vden; | ||||||
| 	if (fabs(evalMaxApprox/na - 1.0) < 0.05) | 	if (fabs(evalMaxApprox/na - 1.0) < 0.0001) | ||||||
| 	  i=_MAX_ITER_IRL_MEVAPP_; | 	  i=_MAX_ITER_IRL_MEVAPP_; | ||||||
| 	evalMaxApprox = na; | 	evalMaxApprox = na; | ||||||
| 	std::cout << GridLogIRL << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | 	std::cout << GridLogIRL << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | ||||||
| @@ -446,7 +336,7 @@ until convergence | |||||||
|       assert(k2<Nm);      assert(k2<Nm);      assert(k1>0); |       assert(k2<Nm);      assert(k2<Nm);      assert(k1>0); | ||||||
|  |  | ||||||
|       basisRotate(evec,Qt,k1-1,k2+1,0,Nm,Nm); /// big constraint on the basis |       basisRotate(evec,Qt,k1-1,k2+1,0,Nm,Nm); /// big constraint on the basis | ||||||
|       std::cout<<GridLogIRL <<"basisRotated  by Qt"<<std::endl; |       std::cout<<GridLogIRL <<"basisRotated  by Qt *"<<k1-1<<","<<k2+1<<")"<<std::endl; | ||||||
|        |        | ||||||
|       //////////////////////////////////////////////////// |       //////////////////////////////////////////////////// | ||||||
|       // Compressed vector f and beta(k2) |       // Compressed vector f and beta(k2) | ||||||
| @@ -454,7 +344,7 @@ until convergence | |||||||
|       f *= Qt(k2-1,Nm-1); |       f *= Qt(k2-1,Nm-1); | ||||||
|       f += lme[k2-1] * evec[k2]; |       f += lme[k2-1] * evec[k2]; | ||||||
|       beta_k = norm2(f); |       beta_k = norm2(f); | ||||||
|       beta_k = sqrt(beta_k); |       beta_k = std::sqrt(beta_k); | ||||||
|       std::cout<<GridLogIRL<<" beta(k) = "<<beta_k<<std::endl; |       std::cout<<GridLogIRL<<" beta(k) = "<<beta_k<<std::endl; | ||||||
| 	   | 	   | ||||||
|       RealD betar = 1.0/beta_k; |       RealD betar = 1.0/beta_k; | ||||||
| @@ -477,7 +367,7 @@ until convergence | |||||||
|  |  | ||||||
| 	std::cout << GridLogIRL << "Test convergence: rotate subset of vectors to test convergence " << std::endl; | 	std::cout << GridLogIRL << "Test convergence: rotate subset of vectors to test convergence " << std::endl; | ||||||
|  |  | ||||||
| 	Field B(grid); B.checkerboard = evec[0].checkerboard; | 	Field B(grid); B.Checkerboard() = evec[0].Checkerboard(); | ||||||
|  |  | ||||||
| 	//  power of two search pattern;  not every evalue in eval2 is assessed. | 	//  power of two search pattern;  not every evalue in eval2 is assessed. | ||||||
| 	int allconv =1; | 	int allconv =1; | ||||||
| @@ -515,7 +405,7 @@ until convergence | |||||||
| 	 | 	 | ||||||
|   converged: |   converged: | ||||||
|     { |     { | ||||||
|       Field B(grid); B.checkerboard = evec[0].checkerboard; |       Field B(grid); B.Checkerboard() = evec[0].Checkerboard(); | ||||||
|       basisRotate(evec,Qt,0,Nk,0,Nk,Nm);	     |       basisRotate(evec,Qt,0,Nk,0,Nk,Nm);	     | ||||||
|       std::cout << GridLogIRL << " Rotated basis"<<std::endl; |       std::cout << GridLogIRL << " Rotated basis"<<std::endl; | ||||||
|       Nconv=0; |       Nconv=0; | ||||||
| @@ -554,11 +444,11 @@ until convergence | |||||||
| /* Saad PP. 195 | /* Saad PP. 195 | ||||||
| 1. Choose an initial vector v1 of 2-norm unity. Set β1 ≡ 0, v0 ≡ 0 | 1. Choose an initial vector v1 of 2-norm unity. Set β1 ≡ 0, v0 ≡ 0 | ||||||
| 2. For k = 1,2,...,m Do: | 2. For k = 1,2,...,m Do: | ||||||
| 3. wk:=Avk−βkv_{k−1}       | 3. wk:=Avk - b_k v_{k-1}       | ||||||
| 4. αk:=(wk,vk)       //  | 4. ak:=(wk,vk)       //  | ||||||
| 5. wk:=wk−αkvk       // wk orthog vk  | 5. wk:=wk-akvk       // wk orthog vk  | ||||||
| 6. βk+1 := ∥wk∥2. If βk+1 = 0 then Stop | 6. bk+1 := ||wk||_2. If b_k+1 = 0 then Stop | ||||||
| 7. vk+1 := wk/βk+1 | 7. vk+1 := wk/b_k+1 | ||||||
| 8. EndDo | 8. EndDo | ||||||
|  */ |  */ | ||||||
|   void step(std::vector<RealD>& lmd, |   void step(std::vector<RealD>& lmd, | ||||||
| @@ -566,6 +456,7 @@ until convergence | |||||||
| 	    std::vector<Field>& evec, | 	    std::vector<Field>& evec, | ||||||
| 	    Field& w,int Nm,int k) | 	    Field& w,int Nm,int k) | ||||||
|   { |   { | ||||||
|  |     std::cout<<GridLogIRL << "Lanczos step " <<k<<std::endl; | ||||||
|     const RealD tiny = 1.0e-20; |     const RealD tiny = 1.0e-20; | ||||||
|     assert( k< Nm ); |     assert( k< Nm ); | ||||||
|  |  | ||||||
| @@ -577,20 +468,20 @@ until convergence | |||||||
|  |  | ||||||
|     if(k>0) w -= lme[k-1] * evec[k-1]; |     if(k>0) w -= lme[k-1] * evec[k-1]; | ||||||
|  |  | ||||||
|     ComplexD zalph = innerProduct(evec_k,w); // 4. αk:=(wk,vk) |     ComplexD zalph = innerProduct(evec_k,w); | ||||||
|     RealD     alph = real(zalph); |     RealD     alph = real(zalph); | ||||||
|  |  | ||||||
|     w = w - alph * evec_k;// 5. wk:=wk−αkvk |     w = w - alph * evec_k; | ||||||
|  |  | ||||||
|     RealD beta = normalise(w); // 6. βk+1 := ∥wk∥2. If βk+1 = 0 then Stop |     RealD beta = normalise(w);  | ||||||
|     // 7. vk+1 := wk/βk+1 |  | ||||||
|  |  | ||||||
|     lmd[k] = alph; |     lmd[k] = alph; | ||||||
|     lme[k] = beta; |     lme[k] = beta; | ||||||
|  |  | ||||||
|     if (k>0 && k % orth_period == 0) { |     if ( (k>0) && ( (k % orth_period) == 0 )) { | ||||||
|  |       std::cout<<GridLogIRL << "Orthogonalising " <<k<<std::endl; | ||||||
|       orthogonalize(w,evec,k); // orthonormalise |       orthogonalize(w,evec,k); // orthonormalise | ||||||
|       std::cout<<GridLogIRL << "Orthogonalised " <<std::endl; |       std::cout<<GridLogIRL << "Orthogonalised " <<k<<std::endl; | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     if(k < Nm-1) evec[k+1] = w; |     if(k < Nm-1) evec[k+1] = w; | ||||||
| @@ -598,6 +489,8 @@ until convergence | |||||||
|     std::cout<<GridLogIRL << "alpha[" << k << "] = " << zalph << " beta[" << k << "] = "<<beta<<std::endl; |     std::cout<<GridLogIRL << "alpha[" << k << "] = " << zalph << " beta[" << k << "] = "<<beta<<std::endl; | ||||||
|     if ( beta < tiny )  |     if ( beta < tiny )  | ||||||
|       std::cout<<GridLogIRL << " beta is tiny "<<beta<<std::endl; |       std::cout<<GridLogIRL << " beta is tiny "<<beta<<std::endl; | ||||||
|  |  | ||||||
|  |     std::cout<<GridLogIRL << "Lanczos step complete " <<k<<std::endl; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   void diagonalize_Eigen(std::vector<RealD>& lmd, std::vector<RealD>& lme,  |   void diagonalize_Eigen(std::vector<RealD>& lmd, std::vector<RealD>& lme,  | ||||||
| @@ -807,7 +700,7 @@ void diagonalize_QR(std::vector<RealD>& lmd, std::vector<RealD>& lme, | |||||||
|      |      | ||||||
|     // determination of 2x2 leading submatrix |     // determination of 2x2 leading submatrix | ||||||
|     RealD dsub = lmd[kmax-1]-lmd[kmax-2]; |     RealD dsub = lmd[kmax-1]-lmd[kmax-2]; | ||||||
|     RealD dd = sqrt(dsub*dsub + 4.0*lme[kmax-2]*lme[kmax-2]); |     RealD dd = std::sqrt(dsub*dsub + 4.0*lme[kmax-2]*lme[kmax-2]); | ||||||
|     RealD Dsh = 0.5*(lmd[kmax-2]+lmd[kmax-1] +dd*(dsub/fabs(dsub))); |     RealD Dsh = 0.5*(lmd[kmax-2]+lmd[kmax-1] +dd*(dsub/fabs(dsub))); | ||||||
|     // (Dsh: shift) |     // (Dsh: shift) | ||||||
|      |      | ||||||
| @@ -838,5 +731,6 @@ void diagonalize_QR(std::vector<RealD>& lmd, std::vector<RealD>& lme, | |||||||
|   abort(); |   abort(); | ||||||
| } | } | ||||||
| }; | }; | ||||||
| } |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -29,8 +29,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_LOCAL_COHERENCE_IRL_H | #ifndef GRID_LOCAL_COHERENCE_IRL_H | ||||||
| #define GRID_LOCAL_COHERENCE_IRL_H | #define GRID_LOCAL_COHERENCE_IRL_H | ||||||
|  |  | ||||||
| namespace Grid {  | NAMESPACE_BEGIN(Grid);  | ||||||
|  |  | ||||||
|  |  | ||||||
| struct LanczosParams : Serializable { | struct LanczosParams : Serializable { | ||||||
| public: | public: | ||||||
| @@ -59,7 +58,7 @@ struct LocalCoherenceLanczosParams : Serializable { | |||||||
| 				  RealD        , coarse_relax_tol, | 				  RealD        , coarse_relax_tol, | ||||||
| 				  std::vector<int>, blockSize, | 				  std::vector<int>, blockSize, | ||||||
| 				  std::string, config, | 				  std::string, config, | ||||||
| 				  std::vector < std::complex<double>  >, omega, | 				  std::vector < ComplexD  >, omega, | ||||||
| 				  RealD, mass, | 				  RealD, mass, | ||||||
| 				  RealD, M5); | 				  RealD, M5); | ||||||
| }; | }; | ||||||
| @@ -83,11 +82,11 @@ public: | |||||||
|   }; |   }; | ||||||
|  |  | ||||||
|   void operator()(const CoarseField& in, CoarseField& out) { |   void operator()(const CoarseField& in, CoarseField& out) { | ||||||
|     GridBase *FineGrid = subspace[0]._grid;     |     GridBase *FineGrid = subspace[0].Grid();     | ||||||
|     int   checkerboard = subspace[0].checkerboard; |     int   checkerboard = subspace[0].Checkerboard(); | ||||||
|  |  | ||||||
|     FineField fin (FineGrid);     fin.checkerboard= checkerboard; |     FineField fin (FineGrid);     fin.Checkerboard()= checkerboard; | ||||||
|     FineField fout(FineGrid);   fout.checkerboard = checkerboard; |     FineField fout(FineGrid);   fout.Checkerboard() = checkerboard; | ||||||
|  |  | ||||||
|     blockPromote(in,fin,subspace);       std::cout<<GridLogIRL<<"ProjectedHermop : Promote to fine"<<std::endl; |     blockPromote(in,fin,subspace);       std::cout<<GridLogIRL<<"ProjectedHermop : Promote to fine"<<std::endl; | ||||||
|     _Linop.HermOp(fin,fout);                   std::cout<<GridLogIRL<<"ProjectedHermop : HermOp (fine) "<<std::endl; |     _Linop.HermOp(fin,fout);                   std::cout<<GridLogIRL<<"ProjectedHermop : HermOp (fine) "<<std::endl; | ||||||
| @@ -118,11 +117,11 @@ public: | |||||||
|  |  | ||||||
|   void operator()(const CoarseField& in, CoarseField& out) { |   void operator()(const CoarseField& in, CoarseField& out) { | ||||||
|  |  | ||||||
|     GridBase *FineGrid = subspace[0]._grid;     |     GridBase *FineGrid = subspace[0].Grid();     | ||||||
|     int   checkerboard = subspace[0].checkerboard; |     int   checkerboard = subspace[0].Checkerboard(); | ||||||
|  |  | ||||||
|     FineField fin (FineGrid); fin.checkerboard =checkerboard; |     FineField fin (FineGrid); fin.Checkerboard() =checkerboard; | ||||||
|     FineField fout(FineGrid);fout.checkerboard =checkerboard; |     FineField fout(FineGrid);fout.Checkerboard() =checkerboard; | ||||||
|      |      | ||||||
|     blockPromote(in,fin,subspace);             std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Promote to fine"<<std::endl; |     blockPromote(in,fin,subspace);             std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Promote to fine"<<std::endl; | ||||||
|     _poly(_Linop,fin,fout);                    std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Poly "<<std::endl; |     _poly(_Linop,fin,fout);                    std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Poly "<<std::endl; | ||||||
| @@ -182,10 +181,10 @@ class ImplicitlyRestartedLanczosSmoothedTester  : public ImplicitlyRestartedLanc | |||||||
|   } |   } | ||||||
|   int ReconstructEval(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox) |   int ReconstructEval(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox) | ||||||
|   { |   { | ||||||
|     GridBase *FineGrid = _subspace[0]._grid;     |     GridBase *FineGrid = _subspace[0].Grid();     | ||||||
|     int checkerboard   = _subspace[0].checkerboard; |     int checkerboard   = _subspace[0].Checkerboard(); | ||||||
|     FineField fB(FineGrid);fB.checkerboard =checkerboard; |     FineField fB(FineGrid);fB.Checkerboard() =checkerboard; | ||||||
|     FineField fv(FineGrid);fv.checkerboard =checkerboard; |     FineField fv(FineGrid);fv.Checkerboard() =checkerboard; | ||||||
|  |  | ||||||
|     blockPromote(B,fv,_subspace);   |     blockPromote(B,fv,_subspace);   | ||||||
|      |      | ||||||
| @@ -305,11 +304,11 @@ public: | |||||||
|     int Nk = nbasis; |     int Nk = nbasis; | ||||||
|     subspace.resize(Nk,_FineGrid); |     subspace.resize(Nk,_FineGrid); | ||||||
|     subspace[0]=1.0; |     subspace[0]=1.0; | ||||||
|     subspace[0].checkerboard=_checkerboard; |     subspace[0].Checkerboard()=_checkerboard; | ||||||
|     normalise(subspace[0]); |     normalise(subspace[0]); | ||||||
|     PlainHermOp<FineField>    Op(_FineOp); |     PlainHermOp<FineField>    Op(_FineOp); | ||||||
|     for(int k=1;k<Nk;k++){ |     for(int k=1;k<Nk;k++){ | ||||||
|       subspace[k].checkerboard=_checkerboard; |       subspace[k].Checkerboard()=_checkerboard; | ||||||
|       Op(subspace[k-1],subspace[k]); |       Op(subspace[k-1],subspace[k]); | ||||||
|       normalise(subspace[k]); |       normalise(subspace[k]); | ||||||
|     } |     } | ||||||
| @@ -360,7 +359,11 @@ public: | |||||||
|  |  | ||||||
|     ImplicitlyRestartedLanczos<FineField> IRL(ChebyOp,Op,Nstop,Nk,Nm,resid,MaxIt,betastp,MinRes); |     ImplicitlyRestartedLanczos<FineField> IRL(ChebyOp,Op,Nstop,Nk,Nm,resid,MaxIt,betastp,MinRes); | ||||||
|  |  | ||||||
|     FineField src(_FineGrid); src=1.0; src.checkerboard = _checkerboard; |     FineField src(_FineGrid);  | ||||||
|  |     typedef typename FineField::scalar_type Scalar; | ||||||
|  |     // src=1.0;  | ||||||
|  |     src=Scalar(1.0);  | ||||||
|  |     src.Checkerboard() = _checkerboard; | ||||||
|  |  | ||||||
|     int Nconv; |     int Nconv; | ||||||
|     IRL.calc(evals_fine,subspace,src,Nconv,false); |     IRL.calc(evals_fine,subspace,src,Nconv,false); | ||||||
| @@ -402,5 +405,5 @@ public: | |||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										157
									
								
								Grid/algorithms/iterative/MinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										157
									
								
								Grid/algorithms/iterative/MinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,157 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/MinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class Field> class MinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // throw an assert when the MR fails to converge. | ||||||
|  |                           // Defaults true. | ||||||
|  |   RealD   Tolerance; | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   RealD   overRelaxParam; | ||||||
|  |   Integer IterationsToComplete; // Number of iterations the MR took to finish. | ||||||
|  |                                 // Filled in upon completion | ||||||
|  |  | ||||||
|  |   MinimalResidual(RealD tol, Integer maxit, Real ovrelparam = 1.0, bool err_on_no_conv = true) | ||||||
|  |     : Tolerance(tol), MaxIterations(maxit), overRelaxParam(ovrelparam), ErrorOnNoConverge(err_on_no_conv){}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     ComplexD a, c; | ||||||
|  |     RealD    d; | ||||||
|  |  | ||||||
|  |     Field Mr(src); | ||||||
|  |     Field r(src); | ||||||
|  |  | ||||||
|  |     // Initial residual computation & set up | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     Linop.Op(psi, Mr); | ||||||
|  |  | ||||||
|  |     r = src - Mr; | ||||||
|  |  | ||||||
|  |     RealD cp = norm2(r); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "MinimalResidual: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "MinimalResidual:   src " << ssq << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "MinimalResidual:  cp,r " << cp << std::endl; | ||||||
|  |  | ||||||
|  |     if (cp <= rsq) { | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogIterative << "MinimalResidual: k=0 residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |     GridStopWatch LinalgTimer; | ||||||
|  |     GridStopWatch MatrixTimer; | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |  | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |     int k; | ||||||
|  |     for (k = 1; k <= MaxIterations; k++) { | ||||||
|  |  | ||||||
|  |       MatrixTimer.Start(); | ||||||
|  |       Linop.Op(r, Mr); | ||||||
|  |       MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|  |  | ||||||
|  |       c = innerProduct(Mr, r); | ||||||
|  |  | ||||||
|  |       d = norm2(Mr); | ||||||
|  |  | ||||||
|  |       a = c / d; | ||||||
|  |  | ||||||
|  |       a = a * overRelaxParam; | ||||||
|  |  | ||||||
|  |       psi = psi + r * a; | ||||||
|  |  | ||||||
|  |       r = r - Mr * a; | ||||||
|  |  | ||||||
|  |       cp = norm2(r); | ||||||
|  |  | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "MinimalResidual: Iteration " << k | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |       std::cout << GridLogDebug << "a = " << a << " c = " << c << " d = " << d << std::endl; | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         Linop.Op(psi, Mr); | ||||||
|  |         r = src - Mr; | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "MinimalResidual Converged on iteration " << k | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "MR Time elapsed: Total   " << SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MR Time elapsed: Matrix  " << MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MR Time elapsed: Linalg  " << LinalgTimer.Elapsed() << std::endl; | ||||||
|  |  | ||||||
|  |         if (ErrorOnNoConverge) | ||||||
|  |           assert(true_residual / Tolerance < 10000.0); | ||||||
|  |  | ||||||
|  |         IterationsToComplete = k; | ||||||
|  |  | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "MinimalResidual did NOT converge" | ||||||
|  |               << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |  | ||||||
|  |     IterationsToComplete = k; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } // namespace Grid | ||||||
|  | #endif | ||||||
| @@ -0,0 +1,276 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithms/iterative/MixedPrecisionFlexibleGeneralisedMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  | #define GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||||
|  |  | ||||||
|  | namespace Grid { | ||||||
|  |  | ||||||
|  | template<class FieldD, class FieldF, typename std::enable_if<getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0> | ||||||
|  | class MixedPrecisionFlexibleGeneralisedMinimalResidual : public OperatorFunction<FieldD> { | ||||||
|  |  public: | ||||||
|  |  | ||||||
|  |   using OperatorFunction<FieldD>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge; // Throw an assert when MPFGMRES fails to converge, | ||||||
|  |                           // defaults to true | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |  | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer RestartLength; | ||||||
|  |   Integer MaxNumberOfRestarts; | ||||||
|  |   Integer IterationCount; // Number of iterations the MPFGMRES took to finish, | ||||||
|  |                           // filled in upon completion | ||||||
|  |  | ||||||
|  |   GridStopWatch MatrixTimer; | ||||||
|  |   GridStopWatch PrecTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |   GridStopWatch QrTimer; | ||||||
|  |   GridStopWatch CompSolutionTimer; | ||||||
|  |   GridStopWatch ChangePrecTimer; | ||||||
|  |  | ||||||
|  |   Eigen::MatrixXcd H; | ||||||
|  |  | ||||||
|  |   std::vector<ComplexD> y; | ||||||
|  |   std::vector<ComplexD> gamma; | ||||||
|  |   std::vector<ComplexD> c; | ||||||
|  |   std::vector<ComplexD> s; | ||||||
|  |  | ||||||
|  |   GridBase* SinglePrecGrid; | ||||||
|  |  | ||||||
|  |   LinearFunction<FieldF> &Preconditioner; | ||||||
|  |  | ||||||
|  |   MixedPrecisionFlexibleGeneralisedMinimalResidual(RealD   tol, | ||||||
|  |                                                    Integer maxit, | ||||||
|  |                                                    GridBase * sp_grid, | ||||||
|  |                                                    LinearFunction<FieldF> &Prec, | ||||||
|  |                                                    Integer restart_length, | ||||||
|  |                                                    bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , RestartLength(restart_length) | ||||||
|  |       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv) | ||||||
|  |       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||||
|  |       , y(RestartLength + 1, 0.) | ||||||
|  |       , gamma(RestartLength + 1, 0.) | ||||||
|  |       , c(RestartLength + 1, 0.) | ||||||
|  |       , s(RestartLength + 1, 0.) | ||||||
|  |       , SinglePrecGrid(sp_grid) | ||||||
|  |       , Preconditioner(Prec) {}; | ||||||
|  |  | ||||||
|  |   void operator()(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi) { | ||||||
|  |  | ||||||
|  |     psi.Checkerboard() = src.Checkerboard(); | ||||||
|  |     conformable(psi, src); | ||||||
|  |  | ||||||
|  |     RealD guess = norm2(psi); | ||||||
|  |     assert(std::isnan(guess) == 0); | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     RealD ssq = norm2(src); | ||||||
|  |     RealD rsq = Tolerance * Tolerance * ssq; | ||||||
|  |  | ||||||
|  |     FieldD r(src.Grid()); | ||||||
|  |  | ||||||
|  |     std::cout << std::setprecision(4) << std::scientific; | ||||||
|  |     std::cout << GridLogIterative << "MPFGMRES: guess " << guess << std::endl; | ||||||
|  |     std::cout << GridLogIterative << "MPFGMRES:   src " << ssq   << std::endl; | ||||||
|  |  | ||||||
|  |     PrecTimer.Reset(); | ||||||
|  |     MatrixTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |     QrTimer.Reset(); | ||||||
|  |     CompSolutionTimer.Reset(); | ||||||
|  |     ChangePrecTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     IterationCount = 0; | ||||||
|  |  | ||||||
|  |     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||||
|  |  | ||||||
|  |       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||||
|  |  | ||||||
|  |       // Stopping condition | ||||||
|  |       if (cp <= rsq) { | ||||||
|  |  | ||||||
|  |         SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  |         LinOp.Op(psi,r); | ||||||
|  |         axpy(r,-1.0,src,r); | ||||||
|  |  | ||||||
|  |         RealD srcnorm       = sqrt(ssq); | ||||||
|  |         RealD resnorm       = sqrt(norm2(r)); | ||||||
|  |         RealD true_residual = resnorm / srcnorm; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage        << "MPFGMRES: Converged on iteration " << IterationCount | ||||||
|  |                   << " computed residual " << sqrt(cp / ssq) | ||||||
|  |                   << " true residual "     << true_residual | ||||||
|  |                   << " target "            << Tolerance << std::endl; | ||||||
|  |  | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Total      " <<       SolverTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Precon     " <<         PrecTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Matrix     " <<       MatrixTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Linalg     " <<       LinalgTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: QR         " <<           QrTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: CompSol    " << CompSolutionTimer.Elapsed() << std::endl; | ||||||
|  |         std::cout << GridLogMessage << "MPFGMRES Time elapsed: PrecChange " <<   ChangePrecTimer.Elapsed() << std::endl; | ||||||
|  |         return; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     std::cout << GridLogMessage << "MPFGMRES did NOT converge" << std::endl; | ||||||
|  |  | ||||||
|  |     if (ErrorOnNoConverge) | ||||||
|  |       assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD outerLoopBody(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi, RealD rsq) { | ||||||
|  |  | ||||||
|  |     RealD cp = 0; | ||||||
|  |  | ||||||
|  |     FieldD w(src.Grid()); | ||||||
|  |     FieldD r(src.Grid()); | ||||||
|  |  | ||||||
|  |     // these should probably be made class members so that they are only allocated once, not in every restart | ||||||
|  |     std::vector<FieldD> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||||
|  |     std::vector<FieldD> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(psi, w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r = src - w; | ||||||
|  |  | ||||||
|  |     gamma[0] = sqrt(norm2(r)); | ||||||
|  |  | ||||||
|  |     v[0] = (1. / gamma[0]) * r; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for (int i=0; i<RestartLength; i++) { | ||||||
|  |  | ||||||
|  |       IterationCount++; | ||||||
|  |  | ||||||
|  |       arnoldiStep(LinOp, v, z, w, i); | ||||||
|  |  | ||||||
|  |       qrUpdate(i); | ||||||
|  |  | ||||||
|  |       cp = norm(gamma[i+1]); | ||||||
|  |  | ||||||
|  |       std::cout << GridLogIterative << "MPFGMRES: Iteration " << IterationCount | ||||||
|  |                 << " residual " << cp << " target " << rsq << std::endl; | ||||||
|  |  | ||||||
|  |       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||||
|  |  | ||||||
|  |         computeSolution(z, psi, i); | ||||||
|  |  | ||||||
|  |         return cp; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     assert(0); // Never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void arnoldiStep(LinearOperatorBase<FieldD> &LinOp, std::vector<FieldD> &v, std::vector<FieldD> &z, FieldD &w, int iter) { | ||||||
|  |  | ||||||
|  |     FieldF v_f(SinglePrecGrid); | ||||||
|  |     FieldF z_f(SinglePrecGrid); | ||||||
|  |  | ||||||
|  |     ChangePrecTimer.Start(); | ||||||
|  |     precisionChange(v_f, v[iter]); | ||||||
|  |     precisionChange(z_f, z[iter]); | ||||||
|  |     ChangePrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     PrecTimer.Start(); | ||||||
|  |     Preconditioner(v_f, z_f); | ||||||
|  |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     ChangePrecTimer.Start(); | ||||||
|  |     precisionChange(z[iter], z_f); | ||||||
|  |     ChangePrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     MatrixTimer.Start(); | ||||||
|  |     LinOp.Op(z[iter], w); | ||||||
|  |     MatrixTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     for (int i = 0; i <= iter; ++i) { | ||||||
|  |       H(iter, i) = innerProduct(v[i], w); | ||||||
|  |       w = w - ComplexD(H(iter, i)) * v[i]; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     H(iter, iter + 1) = sqrt(norm2(w)); | ||||||
|  |     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void qrUpdate(int iter) { | ||||||
|  |  | ||||||
|  |     QrTimer.Start(); | ||||||
|  |     for (int i = 0; i < iter ; ++i) { | ||||||
|  |       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||||
|  |       H(iter, i + 1) = tmp; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     // Compute new Givens Rotation | ||||||
|  |     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||||
|  |     c[iter]     = H(iter, iter) / nu; | ||||||
|  |     s[iter]     = H(iter, iter + 1) / nu; | ||||||
|  |  | ||||||
|  |     // Apply new Givens rotation | ||||||
|  |     H(iter, iter)     = nu; | ||||||
|  |     H(iter, iter + 1) = 0.; | ||||||
|  |  | ||||||
|  |     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||||
|  |     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||||
|  |     QrTimer.Stop(); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   void computeSolution(std::vector<FieldD> const &z, FieldD &psi, int iter) { | ||||||
|  |  | ||||||
|  |     CompSolutionTimer.Start(); | ||||||
|  |     for (int i = iter; i >= 0; i--) { | ||||||
|  |       y[i] = gamma[i]; | ||||||
|  |       for (int k = i + 1; k <= iter; k++) | ||||||
|  |         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||||
|  |       y[i] = y[i] / ComplexD(H(i, i)); | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     for (int i = 0; i <= iter; i++) | ||||||
|  |       psi = psi + z[i] * y[i]; | ||||||
|  |     CompSolutionTimer.Stop(); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
|  | #endif | ||||||
| @@ -28,33 +28,85 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_NORMAL_EQUATIONS_H | #ifndef GRID_NORMAL_EQUATIONS_H | ||||||
| #define GRID_NORMAL_EQUATIONS_H | #define GRID_NORMAL_EQUATIONS_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Take a matrix and form an NE solver calling a Herm solver | // Take a matrix and form an NE solver calling a Herm solver | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   template<class Field> class NormalEquations : public OperatorFunction<Field>{ | template<class Field> class NormalEquations { | ||||||
| private: | private: | ||||||
|   SparseMatrixBase<Field> & _Matrix; |   SparseMatrixBase<Field> & _Matrix; | ||||||
|   OperatorFunction<Field> & _HermitianSolver; |   OperatorFunction<Field> & _HermitianSolver; | ||||||
|  |   LinearFunction<Field>   & _Guess; | ||||||
| public: | public: | ||||||
|  |  | ||||||
|   ///////////////////////////////////////////////////// |   ///////////////////////////////////////////////////// | ||||||
|   // Wrap the usual normal equations trick |   // Wrap the usual normal equations trick | ||||||
|   ///////////////////////////////////////////////////// |   ///////////////////////////////////////////////////// | ||||||
|   NormalEquations(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver)  |  NormalEquations(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver, | ||||||
|     :  _Matrix(Matrix), _HermitianSolver(HermitianSolver) {};  | 		 LinearFunction<Field> &Guess)  | ||||||
|  |    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||||
|  |  | ||||||
|   void operator() (const Field &in, Field &out){ |   void operator() (const Field &in, Field &out){ | ||||||
|   |   | ||||||
|       Field src(in._grid); |     Field src(in.Grid()); | ||||||
|  |     Field tmp(in.Grid()); | ||||||
|  |  | ||||||
|  |     MdagMLinearOperator<SparseMatrixBase<Field>,Field> MdagMOp(_Matrix); | ||||||
|     _Matrix.Mdag(in,src); |     _Matrix.Mdag(in,src); | ||||||
|       _HermitianSolver(src,out);  // Mdag M out = Mdag in |     _Guess(src,out); | ||||||
|  |     _HermitianSolver(MdagMOp,src,out);  // Mdag M out = Mdag in | ||||||
|  |  | ||||||
|   }      |   }      | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class Field> class HPDSolver { | ||||||
|  | private: | ||||||
|  |   LinearOperatorBase<Field> & _Matrix; | ||||||
|  |   OperatorFunction<Field> & _HermitianSolver; | ||||||
|  |   LinearFunction<Field>   & _Guess; | ||||||
|  | public: | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////// | ||||||
|  |   // Wrap the usual normal equations trick | ||||||
|  |   ///////////////////////////////////////////////////// | ||||||
|  |  HPDSolver(LinearOperatorBase<Field> &Matrix, | ||||||
|  | 	   OperatorFunction<Field> &HermitianSolver, | ||||||
|  | 	   LinearFunction<Field> &Guess)  | ||||||
|  |    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||||
|  |  | ||||||
|  |   void operator() (const Field &in, Field &out){ | ||||||
|  |   | ||||||
|  |     _Guess(in,out); | ||||||
|  |     _HermitianSolver(_Matrix,in,out);  // Mdag M out = Mdag in | ||||||
|  |  | ||||||
|   }      |   }      | ||||||
|  | }; | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class Field> class MdagMSolver { | ||||||
|  | private: | ||||||
|  |   SparseMatrixBase<Field> & _Matrix; | ||||||
|  |   OperatorFunction<Field> & _HermitianSolver; | ||||||
|  |   LinearFunction<Field>   & _Guess; | ||||||
|  | public: | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////// | ||||||
|  |   // Wrap the usual normal equations trick | ||||||
|  |   ///////////////////////////////////////////////////// | ||||||
|  |  MdagMSolver(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver, | ||||||
|  | 	     LinearFunction<Field> &Guess)  | ||||||
|  |    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||||
|  |  | ||||||
|  |   void operator() (const Field &in, Field &out){ | ||||||
|  |   | ||||||
|  |     MdagMLinearOperator<SparseMatrixBase<Field>,Field> MdagMOp(_Matrix); | ||||||
|  |     _Guess(in,out); | ||||||
|  |  | ||||||
|  |     _HermitianSolver(MdagMOp,in,out);  // Mdag M out = Mdag in | ||||||
|  |  | ||||||
|  |   }      | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										45
									
								
								Grid/algorithms/iterative/PowerMethod.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										45
									
								
								Grid/algorithms/iterative/PowerMethod.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,45 @@ | |||||||
|  | #pragma once | ||||||
|  | namespace Grid { | ||||||
|  | template<class Field> class PowerMethod   | ||||||
|  | {  | ||||||
|  |  public:  | ||||||
|  |  | ||||||
|  |   template<typename T>  static RealD normalise(T& v)  | ||||||
|  |   { | ||||||
|  |     RealD nn = norm2(v); | ||||||
|  |     nn = sqrt(nn); | ||||||
|  |     v = v * (1.0/nn); | ||||||
|  |     return nn; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD operator()(LinearOperatorBase<Field> &HermOp, const Field &src)  | ||||||
|  |   {  | ||||||
|  |     GridBase *grid = src.Grid();  | ||||||
|  |      | ||||||
|  |     // quickly get an idea of the largest eigenvalue to more properly normalize the residuum  | ||||||
|  |     RealD evalMaxApprox = 0.0;  | ||||||
|  |     auto src_n = src;  | ||||||
|  |     auto tmp = src;  | ||||||
|  |     const int _MAX_ITER_EST_ = 50;  | ||||||
|  |  | ||||||
|  |     for (int i=0;i<_MAX_ITER_EST_;i++) {  | ||||||
|  |        | ||||||
|  |       normalise(src_n);  | ||||||
|  |       HermOp.HermOp(src_n,tmp);  | ||||||
|  |       RealD vnum = real(innerProduct(src_n,tmp)); // HermOp.  | ||||||
|  |       RealD vden = norm2(src_n);  | ||||||
|  |       RealD na = vnum/vden;  | ||||||
|  |        | ||||||
|  |       if ( (fabs(evalMaxApprox/na - 1.0) < 0.001) || (i==_MAX_ITER_EST_-1) ) {  | ||||||
|  |  	evalMaxApprox = na;  | ||||||
|  | 	std::cout << GridLogMessage << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | ||||||
|  |  	return evalMaxApprox;  | ||||||
|  |       }  | ||||||
|  |       evalMaxApprox = na;  | ||||||
|  |       src_n = tmp; | ||||||
|  |     } | ||||||
|  |     assert(0); | ||||||
|  |     return 0; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | } | ||||||
| @@ -28,7 +28,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_PREC_CONJUGATE_RESIDUAL_H | #ifndef GRID_PREC_CONJUGATE_RESIDUAL_H | ||||||
| #define GRID_PREC_CONJUGATE_RESIDUAL_H | #define GRID_PREC_CONJUGATE_RESIDUAL_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| // Base classes for iterative processes based on operators | // Base classes for iterative processes based on operators | ||||||
| @@ -56,7 +56,7 @@ namespace Grid { | |||||||
|     RealD rAr, rAAr, rArp; |     RealD rAr, rAAr, rArp; | ||||||
|     RealD pAp, pAAp; |     RealD pAp, pAAp; | ||||||
|  |  | ||||||
|       GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|     Field r(grid),  p(grid), Ap(grid), Ar(grid), z(grid); |     Field r(grid),  p(grid), Ap(grid), Ar(grid), z(grid); | ||||||
|        |        | ||||||
|     psi=zero; |     psi=zero; | ||||||
| @@ -115,5 +115,5 @@ namespace Grid { | |||||||
|     assert(0); |     assert(0); | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -36,41 +36,50 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| //NB. Likely not original reference since they are focussing on a preconditioner variant. | //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||||
| //    but VPGCR was nicely written up in their paper | //    but VPGCR was nicely written up in their paper | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||||
|  |  | ||||||
| template<class Field> | template<class Field> | ||||||
|     class PrecGeneralisedConjugateResidual : public OperatorFunction<Field> { | class PrecGeneralisedConjugateResidual : public LinearFunction<Field> { | ||||||
| public:                                                 | public:                                                 | ||||||
|  |  | ||||||
|   RealD   Tolerance; |   RealD   Tolerance; | ||||||
|   Integer MaxIterations; |   Integer MaxIterations; | ||||||
|   int verbose; |   int verbose; | ||||||
|   int mmax; |   int mmax; | ||||||
|   int nstep; |   int nstep; | ||||||
|   int steps; |   int steps; | ||||||
|  |   int level; | ||||||
|   GridStopWatch PrecTimer; |   GridStopWatch PrecTimer; | ||||||
|   GridStopWatch MatTimer; |   GridStopWatch MatTimer; | ||||||
|   GridStopWatch LinalgTimer; |   GridStopWatch LinalgTimer; | ||||||
|  |  | ||||||
|   LinearFunction<Field>     &Preconditioner; |   LinearFunction<Field>     &Preconditioner; | ||||||
|  |   LinearOperatorBase<Field> &Linop; | ||||||
|  |  | ||||||
|    PrecGeneralisedConjugateResidual(RealD tol,Integer maxit,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  |   void Level(int lv) { level=lv; }; | ||||||
|  |  | ||||||
|  |   PrecGeneralisedConjugateResidual(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||||
|     Tolerance(tol),  |     Tolerance(tol),  | ||||||
|     MaxIterations(maxit), |     MaxIterations(maxit), | ||||||
|  |     Linop(_Linop), | ||||||
|     Preconditioner(Prec), |     Preconditioner(Prec), | ||||||
|     mmax(_mmax), |     mmax(_mmax), | ||||||
|     nstep(_nstep) |     nstep(_nstep) | ||||||
|   {  |   {  | ||||||
|  |     level=1; | ||||||
|     verbose=1; |     verbose=1; | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|     void operator() (LinearOperatorBase<Field> &Linop,const Field &src, Field &psi){ |   void operator() (const Field &src, Field &psi){ | ||||||
|  |  | ||||||
|       psi=zero; |     psi=Zero(); | ||||||
|     RealD cp, ssq,rsq; |     RealD cp, ssq,rsq; | ||||||
|     ssq=norm2(src); |     ssq=norm2(src); | ||||||
|     rsq=Tolerance*Tolerance*ssq; |     rsq=Tolerance*Tolerance*ssq; | ||||||
|        |        | ||||||
|       Field r(src._grid); |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|     PrecTimer.Reset(); |     PrecTimer.Reset(); | ||||||
|     MatTimer.Reset(); |     MatTimer.Reset(); | ||||||
| @@ -82,9 +91,9 @@ namespace Grid { | |||||||
|     steps=0; |     steps=0; | ||||||
|     for(int k=0;k<MaxIterations;k++){ |     for(int k=0;k<MaxIterations;k++){ | ||||||
|  |  | ||||||
| 	cp=GCRnStep(Linop,src,psi,rsq); |       cp=GCRnStep(src,psi,rsq); | ||||||
|  |  | ||||||
| 	std::cout<<GridLogMessage<<"VPGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<std::endl; |       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||||
|  |  | ||||||
|       if(cp<rsq) { |       if(cp<rsq) { | ||||||
|  |  | ||||||
| @@ -93,31 +102,33 @@ namespace Grid { | |||||||
| 	Linop.HermOp(psi,r); | 	Linop.HermOp(psi,r); | ||||||
| 	axpy(r,-1.0,src,r); | 	axpy(r,-1.0,src,r); | ||||||
| 	RealD tr = norm2(r); | 	RealD tr = norm2(r); | ||||||
| 	  std::cout<<GridLogMessage<<"PrecGeneralisedConjugateResidual: Converged on iteration " <<steps | 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||||
| 		 << " computed residual "<<sqrt(cp/ssq) | 		 << " computed residual "<<sqrt(cp/ssq) | ||||||
| 		 << " true residual "    <<sqrt(tr/ssq) | 		 << " true residual "    <<sqrt(tr/ssq) | ||||||
| 		 << " target "           <<Tolerance <<std::endl; | 		 << " target "           <<Tolerance <<std::endl; | ||||||
|  |  | ||||||
| 	  std::cout<<GridLogMessage<<"VPGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||||
| 	  std::cout<<GridLogMessage<<"VPGCR Time elapsed: Precon "<<   PrecTimer.Elapsed() <<std::endl; | 	/* | ||||||
| 	  std::cout<<GridLogMessage<<"VPGCR Time elapsed: Matrix "<<    MatTimer.Elapsed() <<std::endl; | 	  GCRLogLevel<<"PGCR Time elapsed: Precon "<<   PrecTimer.Elapsed() <<std::endl; | ||||||
| 	  std::cout<<GridLogMessage<<"VPGCR Time elapsed: Linalg "<< LinalgTimer.Elapsed() <<std::endl; | 	  GCRLogLevel<<"PGCR Time elapsed: Matrix "<<    MatTimer.Elapsed() <<std::endl; | ||||||
|  | 	  GCRLogLevel<<"PGCR Time elapsed: Linalg "<< LinalgTimer.Elapsed() <<std::endl; | ||||||
|  | 	*/ | ||||||
| 	return; | 	return; | ||||||
|       } |       } | ||||||
|  |  | ||||||
|     } |     } | ||||||
|       std::cout<<GridLogMessage<<"Variable Preconditioned GCR did not converge"<<std::endl; |     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||||
|       assert(0); |     //    assert(0); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|     RealD GCRnStep(LinearOperatorBase<Field> &Linop,const Field &src, Field &psi,RealD rsq){ |   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||||
|  |  | ||||||
|     RealD cp; |     RealD cp; | ||||||
|       RealD a, b, c, d; |     RealD a, b; | ||||||
|     RealD zAz, zAAz; |     RealD zAz, zAAz; | ||||||
|       RealD rAq, rq; |     RealD rq; | ||||||
|  |  | ||||||
|       GridBase *grid = src._grid; |     GridBase *grid = src.Grid(); | ||||||
|  |  | ||||||
|     Field r(grid); |     Field r(grid); | ||||||
|     Field z(grid); |     Field z(grid); | ||||||
| @@ -132,6 +143,8 @@ namespace Grid { | |||||||
|     std::vector<Field> p(mmax,grid); |     std::vector<Field> p(mmax,grid); | ||||||
|     std::vector<RealD> qq(mmax); |     std::vector<RealD> qq(mmax); | ||||||
|        |        | ||||||
|  |     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||||
|  |  | ||||||
|     ////////////////////////////////// |     ////////////////////////////////// | ||||||
|     // initial guess x0 is taken as nonzero. |     // initial guess x0 is taken as nonzero. | ||||||
|     // r0=src-A x0 = src |     // r0=src-A x0 = src | ||||||
| @@ -139,39 +152,34 @@ namespace Grid { | |||||||
|     MatTimer.Start(); |     MatTimer.Start(); | ||||||
|     Linop.HermOpAndNorm(psi,Az,zAz,zAAz);  |     Linop.HermOpAndNorm(psi,Az,zAz,zAAz);  | ||||||
|     MatTimer.Stop(); |     MatTimer.Stop(); | ||||||
|  |      | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|     r=src-Az; |     r=src-Az; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||||
|      |      | ||||||
|     ///////////////////// |     ///////////////////// | ||||||
|     // p = Prec(r) |     // p = Prec(r) | ||||||
|     ///////////////////// |     ///////////////////// | ||||||
|  |  | ||||||
|     PrecTimer.Start(); |     PrecTimer.Start(); | ||||||
|     Preconditioner(r,z); |     Preconditioner(r,z); | ||||||
|     PrecTimer.Stop(); |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|       MatTimer.Start(); |  | ||||||
|       Linop.HermOp(z,tmp);  |  | ||||||
|       MatTimer.Stop(); |  | ||||||
|  |  | ||||||
|       ttmp=tmp; |  | ||||||
|       tmp=tmp-r; |  | ||||||
|  |  | ||||||
|       /* |  | ||||||
|       std::cout<<GridLogMessage<<r<<std::endl; |  | ||||||
|       std::cout<<GridLogMessage<<z<<std::endl; |  | ||||||
|       std::cout<<GridLogMessage<<ttmp<<std::endl; |  | ||||||
|       std::cout<<GridLogMessage<<tmp<<std::endl; |  | ||||||
|       */ |  | ||||||
|  |  | ||||||
|     MatTimer.Start(); |     MatTimer.Start(); | ||||||
|     Linop.HermOpAndNorm(z,Az,zAz,zAAz);  |     Linop.HermOpAndNorm(z,Az,zAz,zAAz);  | ||||||
|     MatTimer.Stop(); |     MatTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |  | ||||||
|     //p[0],q[0],qq[0]  |     //p[0],q[0],qq[0]  | ||||||
|     p[0]= z; |     p[0]= z; | ||||||
|     q[0]= Az; |     q[0]= Az; | ||||||
|     qq[0]= zAAz; |     qq[0]= zAAz; | ||||||
|      |      | ||||||
|     cp =norm2(r); |     cp =norm2(r); | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|     for(int k=0;k<nstep;k++){ |     for(int k=0;k<nstep;k++){ | ||||||
|  |  | ||||||
| @@ -181,18 +189,21 @@ namespace Grid { | |||||||
|       int peri_k = k %mmax; |       int peri_k = k %mmax; | ||||||
|       int peri_kp= kp%mmax; |       int peri_kp= kp%mmax; | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|       rq= real(innerProduct(r,q[peri_k])); // what if rAr not real? |       rq= real(innerProduct(r,q[peri_k])); // what if rAr not real? | ||||||
|       a = rq/qq[peri_k]; |       a = rq/qq[peri_k]; | ||||||
|  |  | ||||||
|       axpy(psi,a,p[peri_k],psi);          |       axpy(psi,a,p[peri_k],psi);          | ||||||
|  |  | ||||||
|       cp = axpy_norm(r,-a,q[peri_k],r); |       cp = axpy_norm(r,-a,q[peri_k],r); | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||||
|  |  | ||||||
|       if((k==nstep-1)||(cp<rsq)){ |       if((k==nstep-1)||(cp<rsq)){ | ||||||
| 	return cp; | 	return cp; | ||||||
|       } |       } | ||||||
|  |  | ||||||
| 	std::cout<<GridLogMessage<< " VPGCR_step["<<steps<<"]  resid " <<sqrt(cp/rsq)<<std::endl;  |  | ||||||
|  |  | ||||||
|       PrecTimer.Start(); |       PrecTimer.Start(); | ||||||
|       Preconditioner(r,z);// solve Az = r |       Preconditioner(r,z);// solve Az = r | ||||||
| @@ -200,10 +211,9 @@ namespace Grid { | |||||||
|  |  | ||||||
|       MatTimer.Start(); |       MatTimer.Start(); | ||||||
|       Linop.HermOpAndNorm(z,Az,zAz,zAAz); |       Linop.HermOpAndNorm(z,Az,zAz,zAAz); | ||||||
| 	Linop.HermOp(z,tmp); |  | ||||||
|       MatTimer.Stop(); |       MatTimer.Stop(); | ||||||
|         tmp=tmp-r; |  | ||||||
| 	std::cout<<GridLogMessage<< " Preconditioner resid " <<sqrt(norm2(tmp)/norm2(r))<<std::endl;  |       LinalgTimer.Start(); | ||||||
|  |  | ||||||
|       q[peri_kp]=Az; |       q[peri_kp]=Az; | ||||||
|       p[peri_kp]=z; |       p[peri_kp]=z; | ||||||
| @@ -219,12 +229,11 @@ namespace Grid { | |||||||
|  |  | ||||||
|       } |       } | ||||||
|       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm |       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|     } |     } | ||||||
|     assert(0); // never reached |     assert(0); // never reached | ||||||
|     return cp; |     return cp; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -0,0 +1,241 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_PREC_GCR_NON_HERM_H | ||||||
|  | #define GRID_PREC_GCR_NON_HERM_H | ||||||
|  |  | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | //VPGCR Abe and Zhang, 2005. | ||||||
|  | //INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING | ||||||
|  | //Computing and Information Volume 2, Number 2, Pages 147-161 | ||||||
|  | //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||||
|  | //    but VPGCR was nicely written up in their paper | ||||||
|  | /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> { | ||||||
|  | public:                                                 | ||||||
|  |  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   int verbose; | ||||||
|  |   int mmax; | ||||||
|  |   int nstep; | ||||||
|  |   int steps; | ||||||
|  |   int level; | ||||||
|  |   GridStopWatch PrecTimer; | ||||||
|  |   GridStopWatch MatTimer; | ||||||
|  |   GridStopWatch LinalgTimer; | ||||||
|  |  | ||||||
|  |   LinearFunction<Field>     &Preconditioner; | ||||||
|  |   LinearOperatorBase<Field> &Linop; | ||||||
|  |  | ||||||
|  |   void Level(int lv) { level=lv; }; | ||||||
|  |  | ||||||
|  |   PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||||
|  |     Tolerance(tol),  | ||||||
|  |     MaxIterations(maxit), | ||||||
|  |     Linop(_Linop), | ||||||
|  |     Preconditioner(Prec), | ||||||
|  |     mmax(_mmax), | ||||||
|  |     nstep(_nstep) | ||||||
|  |   {  | ||||||
|  |     level=1; | ||||||
|  |     verbose=1; | ||||||
|  |   }; | ||||||
|  |  | ||||||
|  |   void operator() (const Field &src, Field &psi){ | ||||||
|  |  | ||||||
|  |     psi=Zero(); | ||||||
|  |     RealD cp, ssq,rsq; | ||||||
|  |     ssq=norm2(src); | ||||||
|  |     rsq=Tolerance*Tolerance*ssq; | ||||||
|  |        | ||||||
|  |     Field r(src.Grid()); | ||||||
|  |  | ||||||
|  |     PrecTimer.Reset(); | ||||||
|  |     MatTimer.Reset(); | ||||||
|  |     LinalgTimer.Reset(); | ||||||
|  |  | ||||||
|  |     GridStopWatch SolverTimer; | ||||||
|  |     SolverTimer.Start(); | ||||||
|  |  | ||||||
|  |     steps=0; | ||||||
|  |     for(int k=0;k<MaxIterations;k++){ | ||||||
|  |  | ||||||
|  |       cp=GCRnStep(src,psi,rsq); | ||||||
|  |  | ||||||
|  |       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||||
|  |  | ||||||
|  |       if(cp<rsq) { | ||||||
|  |  | ||||||
|  | 	SolverTimer.Stop(); | ||||||
|  |  | ||||||
|  | 	Linop.Op(psi,r); | ||||||
|  | 	axpy(r,-1.0,src,r); | ||||||
|  | 	RealD tr = norm2(r); | ||||||
|  | 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||||
|  | 		 << " computed residual "<<sqrt(cp/ssq) | ||||||
|  | 		 << " true residual "    <<sqrt(tr/ssq) | ||||||
|  | 		 << " target "           <<Tolerance <<std::endl; | ||||||
|  |  | ||||||
|  | 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||||
|  | 	return; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |     } | ||||||
|  |     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||||
|  |     //    assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||||
|  |  | ||||||
|  |     RealD cp; | ||||||
|  |     ComplexD a, b, zAz; | ||||||
|  |     RealD zAAz; | ||||||
|  |     ComplexD rq; | ||||||
|  |  | ||||||
|  |     GridBase *grid = src.Grid(); | ||||||
|  |  | ||||||
|  |     Field r(grid); | ||||||
|  |     Field z(grid); | ||||||
|  |     Field tmp(grid); | ||||||
|  |     Field ttmp(grid); | ||||||
|  |     Field Az(grid); | ||||||
|  |  | ||||||
|  |     //////////////////////////////// | ||||||
|  |     // history for flexible orthog | ||||||
|  |     //////////////////////////////// | ||||||
|  |     std::vector<Field> q(mmax,grid); | ||||||
|  |     std::vector<Field> p(mmax,grid); | ||||||
|  |     std::vector<RealD> qq(mmax); | ||||||
|  |        | ||||||
|  |     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||||
|  |  | ||||||
|  |     ////////////////////////////////// | ||||||
|  |     // initial guess x0 is taken as nonzero. | ||||||
|  |     // r0=src-A x0 = src | ||||||
|  |     ////////////////////////////////// | ||||||
|  |     MatTimer.Start(); | ||||||
|  |     Linop.Op(psi,Az); | ||||||
|  |     zAz = innerProduct(Az,psi); | ||||||
|  |     zAAz= norm2(Az); | ||||||
|  |     MatTimer.Stop(); | ||||||
|  |      | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |     r=src-Az; | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||||
|  |      | ||||||
|  |     ///////////////////// | ||||||
|  |     // p = Prec(r) | ||||||
|  |     ///////////////////// | ||||||
|  |  | ||||||
|  |     PrecTimer.Start(); | ||||||
|  |     Preconditioner(r,z); | ||||||
|  |     PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |     MatTimer.Start(); | ||||||
|  |     Linop.Op(z,Az); | ||||||
|  |     MatTimer.Stop(); | ||||||
|  |  | ||||||
|  |     LinalgTimer.Start(); | ||||||
|  |  | ||||||
|  |     zAz = innerProduct(Az,psi); | ||||||
|  |     zAAz= norm2(Az); | ||||||
|  |  | ||||||
|  |     //p[0],q[0],qq[0]  | ||||||
|  |     p[0]= z; | ||||||
|  |     q[0]= Az; | ||||||
|  |     qq[0]= zAAz; | ||||||
|  |      | ||||||
|  |     cp =norm2(r); | ||||||
|  |     LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |     for(int k=0;k<nstep;k++){ | ||||||
|  |  | ||||||
|  |       steps++; | ||||||
|  |  | ||||||
|  |       int kp     = k+1; | ||||||
|  |       int peri_k = k %mmax; | ||||||
|  |       int peri_kp= kp%mmax; | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|  |       rq= innerProduct(q[peri_k],r); // what if rAr not real? | ||||||
|  |       a = rq/qq[peri_k]; | ||||||
|  |  | ||||||
|  |       axpy(psi,a,p[peri_k],psi);          | ||||||
|  |  | ||||||
|  |       cp = axpy_norm(r,-a,q[peri_k],r); | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |  | ||||||
|  |       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||||
|  |  | ||||||
|  |       if((k==nstep-1)||(cp<rsq)){ | ||||||
|  | 	return cp; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       PrecTimer.Start(); | ||||||
|  |       Preconditioner(r,z);// solve Az = r | ||||||
|  |       PrecTimer.Stop(); | ||||||
|  |  | ||||||
|  |       MatTimer.Start(); | ||||||
|  |       Linop.Op(z,Az); | ||||||
|  |       MatTimer.Stop(); | ||||||
|  |       zAz = innerProduct(Az,psi); | ||||||
|  |       zAAz= norm2(Az); | ||||||
|  |  | ||||||
|  |       LinalgTimer.Start(); | ||||||
|  |  | ||||||
|  |       q[peri_kp]=Az; | ||||||
|  |       p[peri_kp]=z; | ||||||
|  |  | ||||||
|  |       int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history. | ||||||
|  |       for(int back=0;back<northog;back++){ | ||||||
|  |  | ||||||
|  | 	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0); | ||||||
|  |  | ||||||
|  | 	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back]; | ||||||
|  | 	p[peri_kp]=p[peri_kp]+b*p[peri_back]; | ||||||
|  | 	q[peri_kp]=q[peri_kp]+b*q[peri_back]; | ||||||
|  |  | ||||||
|  |       } | ||||||
|  |       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||||
|  |       LinalgTimer.Stop(); | ||||||
|  |     } | ||||||
|  |     assert(0); // never reached | ||||||
|  |     return cp; | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  | #endif | ||||||
							
								
								
									
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								Grid/algorithms/iterative/QuasiMinimalResidual.h
									
									
									
									
									
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										371
									
								
								Grid/algorithms/iterative/QuasiMinimalResidual.h
									
									
									
									
									
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							| @@ -0,0 +1,371 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/algorithmsf/iterative/QuasiMinimalResidual.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2019 | ||||||
|  |  | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Field>  | ||||||
|  | RealD innerG5ProductReal(Field &l, Field &r) | ||||||
|  | { | ||||||
|  |   Gamma G5(Gamma::Algebra::Gamma5); | ||||||
|  |   Field tmp(l.Grid()); | ||||||
|  |   //  tmp = G5*r; | ||||||
|  |   G5R5(tmp,r); | ||||||
|  |   ComplexD ip =innerProduct(l,tmp); | ||||||
|  |   std::cout << "innerProductRealG5R5 "<<ip<<std::endl; | ||||||
|  |   return ip.real(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | class QuasiMinimalResidual : public OperatorFunction<Field> { | ||||||
|  |  public: | ||||||
|  |   using OperatorFunction<Field>::operator(); | ||||||
|  |  | ||||||
|  |   bool ErrorOnNoConverge;  | ||||||
|  |   RealD   Tolerance; | ||||||
|  |   Integer MaxIterations; | ||||||
|  |   Integer IterationCount; | ||||||
|  |  | ||||||
|  |   QuasiMinimalResidual(RealD   tol, | ||||||
|  | 		       Integer maxit, | ||||||
|  | 		       bool    err_on_no_conv = true) | ||||||
|  |       : Tolerance(tol) | ||||||
|  |       , MaxIterations(maxit) | ||||||
|  |       , ErrorOnNoConverge(err_on_no_conv)  | ||||||
|  |   {}; | ||||||
|  |  | ||||||
|  | #if 1 | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &b, Field &x)  | ||||||
|  |   { | ||||||
|  |     RealD resid; | ||||||
|  |     IterationCount=0; | ||||||
|  |  | ||||||
|  |     RealD  rho, rho_1, xi, gamma, gamma_1, theta, theta_1; | ||||||
|  |     RealD  eta, delta, ep, beta;  | ||||||
|  |  | ||||||
|  |     GridBase *Grid = b.Grid(); | ||||||
|  |     Field r(Grid), d(Grid), s(Grid); | ||||||
|  |     Field v(Grid), w(Grid), y(Grid),  z(Grid); | ||||||
|  |     Field v_tld(Grid), w_tld(Grid), y_tld(Grid), z_tld(Grid); | ||||||
|  |     Field p(Grid), q(Grid), p_tld(Grid); | ||||||
|  |  | ||||||
|  |     Real normb = norm2(b); | ||||||
|  |  | ||||||
|  |     LinOp.Op(x,r); r = b - r; | ||||||
|  |  | ||||||
|  |     assert(normb> 0.0); | ||||||
|  |  | ||||||
|  |     resid = norm2(r)/normb; | ||||||
|  |     if (resid <= Tolerance) { | ||||||
|  |       return; | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |     v_tld = r; | ||||||
|  |     y = v_tld; | ||||||
|  |     rho = norm2(y); | ||||||
|  |  | ||||||
|  |     // Take Gamma5 conjugate | ||||||
|  |     //    Gamma G5(Gamma::Algebra::Gamma5); | ||||||
|  |     //    G5R5(w_tld,r); | ||||||
|  |     //    w_tld = G5* v_tld; | ||||||
|  |     w_tld=v_tld; | ||||||
|  |     z = w_tld; | ||||||
|  |     xi = norm2(z); | ||||||
|  |  | ||||||
|  |     gamma = 1.0; | ||||||
|  |     eta   = -1.0; | ||||||
|  |     theta = 0.0; | ||||||
|  |  | ||||||
|  |     for (int i = 1; i <= MaxIterations; i++) { | ||||||
|  |  | ||||||
|  |       // Breakdown tests | ||||||
|  |       assert( rho != 0.0); | ||||||
|  |       assert( xi  != 0.0); | ||||||
|  |  | ||||||
|  |       v = (1. / rho) * v_tld; | ||||||
|  |       y = (1. / rho) * y; | ||||||
|  |  | ||||||
|  |       w = (1. / xi) * w_tld; | ||||||
|  |       z = (1. / xi) * z; | ||||||
|  |  | ||||||
|  |       ComplexD Zdelta = innerProduct(z, y); // Complex? | ||||||
|  |       std::cout << "Zdelta "<<Zdelta<<std::endl; | ||||||
|  |       delta = Zdelta.real(); | ||||||
|  |  | ||||||
|  |       y_tld = y;  | ||||||
|  |       z_tld = z; | ||||||
|  |  | ||||||
|  |       if (i > 1) { | ||||||
|  | 	p = y_tld - (xi  * delta / ep) * p; | ||||||
|  | 	q = z_tld - (rho * delta / ep) * q; | ||||||
|  |       } else { | ||||||
|  | 	p = y_tld; | ||||||
|  | 	q = z_tld; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       LinOp.Op(p,p_tld);      //     p_tld = A * p; | ||||||
|  |       ComplexD Zep = innerProduct(q, p_tld); | ||||||
|  |       ep=Zep.real(); | ||||||
|  |       std::cout << "Zep "<<Zep <<std::endl; | ||||||
|  |       // Complex Audit | ||||||
|  |       assert(abs(ep)>0); | ||||||
|  |  | ||||||
|  |       beta = ep / delta; | ||||||
|  |       assert(abs(beta)>0); | ||||||
|  |  | ||||||
|  |       v_tld = p_tld - beta * v; | ||||||
|  |       y = v_tld; | ||||||
|  |  | ||||||
|  |       rho_1 = rho; | ||||||
|  |       rho   = norm2(y); | ||||||
|  |       LinOp.AdjOp(q,w_tld); | ||||||
|  |       w_tld = w_tld - beta * w; | ||||||
|  |       z = w_tld; | ||||||
|  |  | ||||||
|  |       xi = norm2(z); | ||||||
|  |  | ||||||
|  |       gamma_1 = gamma; | ||||||
|  |       theta_1 = theta; | ||||||
|  |  | ||||||
|  |       theta   = rho / (gamma_1 * beta); | ||||||
|  |       gamma   = 1.0 / sqrt(1.0 + theta * theta); | ||||||
|  |       std::cout << "theta "<<theta<<std::endl; | ||||||
|  |       std::cout << "gamma "<<gamma<<std::endl; | ||||||
|  |  | ||||||
|  |       assert(abs(gamma)> 0.0); | ||||||
|  |  | ||||||
|  |       eta = -eta * rho_1 * gamma* gamma / (beta * gamma_1 * gamma_1); | ||||||
|  |  | ||||||
|  |       if (i > 1) { | ||||||
|  | 	d = eta * p + (theta_1 * theta_1 * gamma * gamma) * d; | ||||||
|  | 	s = eta * p_tld + (theta_1 * theta_1 * gamma * gamma) * s; | ||||||
|  |       } else { | ||||||
|  | 	d = eta * p; | ||||||
|  | 	s = eta * p_tld; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       x =x+d;                            // update approximation vector | ||||||
|  |       r =r-s;                            // compute residual | ||||||
|  |  | ||||||
|  |       if ((resid = norm2(r) / normb) <= Tolerance) { | ||||||
|  | 	return; | ||||||
|  |       } | ||||||
|  |       std::cout << "Iteration "<<i<<" resid " << resid<<std::endl; | ||||||
|  |     } | ||||||
|  |     assert(0); | ||||||
|  |     return;                            // no convergence | ||||||
|  |   } | ||||||
|  | #else | ||||||
|  |   // QMRg5 SMP thesis | ||||||
|  |   void operator()(LinearOperatorBase<Field> &LinOp, const Field &b, Field &x)  | ||||||
|  |   { | ||||||
|  |     // Real scalars | ||||||
|  |     GridBase *grid = b.Grid(); | ||||||
|  |  | ||||||
|  |     Field    r(grid); | ||||||
|  |     Field    p_m(grid), p_m_minus_1(grid), p_m_minus_2(grid); | ||||||
|  |     Field    v_m(grid), v_m_minus_1(grid), v_m_plus_1(grid); | ||||||
|  |     Field    tmp(grid); | ||||||
|  |  | ||||||
|  |     RealD    w; | ||||||
|  |     RealD    z1, z2; | ||||||
|  |     RealD    delta_m, delta_m_minus_1; | ||||||
|  |     RealD    c_m_plus_1, c_m, c_m_minus_1; | ||||||
|  |     RealD    s_m_plus_1, s_m, s_m_minus_1; | ||||||
|  |     RealD    alpha, beta, gamma, epsilon; | ||||||
|  |     RealD    mu, nu, rho, theta, xi, chi; | ||||||
|  |     RealD    mod2r, mod2b; | ||||||
|  |     RealD    tau2, target2; | ||||||
|  |  | ||||||
|  |     mod2b=norm2(b); | ||||||
|  |  | ||||||
|  |     ///////////////////////// | ||||||
|  |     // Initial residual | ||||||
|  |     ///////////////////////// | ||||||
|  |     LinOp.Op(x,tmp); | ||||||
|  |     r = b - tmp; | ||||||
|  |  | ||||||
|  |     ///////////////////////// | ||||||
|  |     // \mu = \rho = |r_0| | ||||||
|  |     ///////////////////////// | ||||||
|  |     mod2r = norm2(r); | ||||||
|  |     rho = sqrt( mod2r); | ||||||
|  |     mu=rho; | ||||||
|  |      | ||||||
|  |     std::cout << "QuasiMinimalResidual rho "<< rho<<std::endl; | ||||||
|  |     ///////////////////////// | ||||||
|  |     // Zero negative history | ||||||
|  |     ///////////////////////// | ||||||
|  |     v_m_plus_1  = Zero(); | ||||||
|  |     v_m_minus_1 = Zero(); | ||||||
|  |     p_m_minus_1 = Zero(); | ||||||
|  |     p_m_minus_2 = Zero(); | ||||||
|  |  | ||||||
|  |     // v0 | ||||||
|  |     v_m = (1.0/rho)*r; | ||||||
|  |  | ||||||
|  |     ///////////////////////// | ||||||
|  |     // Initial coeffs | ||||||
|  |     ///////////////////////// | ||||||
|  |     delta_m_minus_1 = 1.0; | ||||||
|  |     c_m_minus_1     = 1.0; | ||||||
|  |     c_m             = 1.0; | ||||||
|  |     s_m_minus_1     = 0.0; | ||||||
|  |     s_m             = 0.0; | ||||||
|  |  | ||||||
|  |     ///////////////////////// | ||||||
|  |     // Set up convergence check | ||||||
|  |     ///////////////////////// | ||||||
|  |     tau2    = mod2r; | ||||||
|  |     target2 = mod2b * Tolerance*Tolerance; | ||||||
|  |   | ||||||
|  |     for(int iter = 0 ; iter < MaxIterations; iter++){ | ||||||
|  |  | ||||||
|  |       ///////////////////////// | ||||||
|  |       // \delta_m = (v_m, \gamma_5 v_m)  | ||||||
|  |       ///////////////////////// | ||||||
|  |       delta_m = innerG5ProductReal(v_m,v_m); | ||||||
|  |       std::cout << "QuasiMinimalResidual delta_m "<< delta_m<<std::endl; | ||||||
|  |  | ||||||
|  |       ///////////////////////// | ||||||
|  |       // tmp = A v_m | ||||||
|  |       ///////////////////////// | ||||||
|  |       LinOp.Op(v_m,tmp); | ||||||
|  |  | ||||||
|  |       ///////////////////////// | ||||||
|  |       // \alpha = (v_m, \gamma_5 temp) / \delta_m  | ||||||
|  |       ///////////////////////// | ||||||
|  |       alpha = innerG5ProductReal(v_m,tmp); | ||||||
|  |       alpha = alpha/delta_m ; | ||||||
|  |       std::cout << "QuasiMinimalResidual alpha "<< alpha<<std::endl; | ||||||
|  |  | ||||||
|  |       ///////////////////////// | ||||||
|  |       // \beta = \rho \delta_m / \delta_{m-1} | ||||||
|  |       ///////////////////////// | ||||||
|  |       beta = rho * delta_m / delta_m_minus_1; | ||||||
|  |       std::cout << "QuasiMinimalResidual beta "<< beta<<std::endl; | ||||||
|  |  | ||||||
|  |       ///////////////////////// | ||||||
|  |       // \tilde{v}_{m+1} = temp - \alpha v_m - \beta v_{m-1} | ||||||
|  |       ///////////////////////// | ||||||
|  |       v_m_plus_1 = tmp - alpha*v_m - beta*v_m_minus_1; | ||||||
|  |  | ||||||
|  |       /////////////////////////////// | ||||||
|  |       // \rho = || \tilde{v}_{m+1} || | ||||||
|  |       /////////////////////////////// | ||||||
|  |       rho = sqrt( norm2(v_m_plus_1) ); | ||||||
|  |       std::cout << "QuasiMinimalResidual rho "<< rho<<std::endl; | ||||||
|  |  | ||||||
|  |       /////////////////////////////// | ||||||
|  |       //      v_{m+1} = \tilde{v}_{m+1} | ||||||
|  |       /////////////////////////////// | ||||||
|  |       v_m_plus_1 = (1.0 / rho) * v_m_plus_1; | ||||||
|  |  | ||||||
|  |       //////////////////////////////// | ||||||
|  |       // QMR recurrence coefficients. | ||||||
|  |       //////////////////////////////// | ||||||
|  |       theta      = s_m_minus_1 * beta; | ||||||
|  |       gamma      = c_m_minus_1 * beta; | ||||||
|  |       epsilon    =  c_m * gamma + s_m * alpha; | ||||||
|  |       xi         = -s_m * gamma + c_m * alpha; | ||||||
|  |       nu         = sqrt( xi*xi + rho*rho ); | ||||||
|  |       c_m_plus_1 = fabs(xi) / nu; | ||||||
|  |       if ( xi == 0.0 ) { | ||||||
|  | 	s_m_plus_1 = 1.0; | ||||||
|  |       } else { | ||||||
|  | 	s_m_plus_1 = c_m_plus_1 * rho / xi; | ||||||
|  |       } | ||||||
|  |       chi = c_m_plus_1 * xi + s_m_plus_1 * rho; | ||||||
|  |  | ||||||
|  |       std::cout << "QuasiMinimalResidual coeffs "<< theta <<" "<<gamma<<" "<< epsilon<<" "<< xi<<" "<< nu<<std::endl; | ||||||
|  |       std::cout << "QuasiMinimalResidual coeffs "<< chi   <<std::endl; | ||||||
|  |  | ||||||
|  |       //////////////////////////////// | ||||||
|  |       //p_m=(v_m - \epsilon p_{m-1} - \theta p_{m-2}) / \chi | ||||||
|  |       //////////////////////////////// | ||||||
|  |       p_m = (1.0/chi) * v_m - (epsilon/chi) * p_m_minus_1 - (theta/chi) * p_m_minus_2; | ||||||
|  |  | ||||||
|  |       //////////////////////////////////////////////////////////////// | ||||||
|  |       //      \psi = \psi + c_{m+1} \mu p_m	 | ||||||
|  |       //////////////////////////////////////////////////////////////// | ||||||
|  |       x = x + ( c_m_plus_1 * mu ) * p_m; | ||||||
|  |  | ||||||
|  |       //////////////////////////////////////// | ||||||
|  |       // | ||||||
|  |       //////////////////////////////////////// | ||||||
|  |       mu              = -s_m_plus_1 * mu; | ||||||
|  |       delta_m_minus_1 = delta_m; | ||||||
|  |       c_m_minus_1     = c_m; | ||||||
|  |       c_m             = c_m_plus_1; | ||||||
|  |       s_m_minus_1     = s_m; | ||||||
|  |       s_m             = s_m_plus_1; | ||||||
|  |  | ||||||
|  |       //////////////////////////////////// | ||||||
|  |       // Could use pointer swizzle games. | ||||||
|  |       //////////////////////////////////// | ||||||
|  |       v_m_minus_1 = v_m; | ||||||
|  |       v_m         = v_m_plus_1; | ||||||
|  |       p_m_minus_2 = p_m_minus_1; | ||||||
|  |       p_m_minus_1 = p_m; | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       ///////////////////////////////////// | ||||||
|  |       // Convergence checks | ||||||
|  |       ///////////////////////////////////// | ||||||
|  |       z1 = RealD(iter+1.0); | ||||||
|  |       z2 = z1 + 1.0; | ||||||
|  |       tau2 = tau2 *( z2 / z1 ) * s_m * s_m; | ||||||
|  |       std::cout << " QuasiMinimumResidual iteration "<< iter<<std::endl; | ||||||
|  |       std::cout << " QuasiMinimumResidual tau bound "<< tau2<<std::endl; | ||||||
|  |  | ||||||
|  |       // Compute true residual | ||||||
|  |       mod2r = tau2; | ||||||
|  |       if ( 1 || (tau2 < (100.0 * target2)) ) { | ||||||
|  | 	LinOp.Op(x,tmp); | ||||||
|  | 	r = b - tmp; | ||||||
|  | 	mod2r = norm2(r); | ||||||
|  | 	std::cout << " QuasiMinimumResidual true residual is "<< mod2r<<std::endl; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       if ( mod2r < target2 ) {  | ||||||
|  |  | ||||||
|  | 	std::cout << " QuasiMinimumResidual has converged"<<std::endl; | ||||||
|  | 	return; | ||||||
|  |  | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |     } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |   } | ||||||
|  | #endif | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -99,10 +99,13 @@ namespace Grid { | |||||||
|     OperatorFunction<Field> & _HermitianRBSolver; |     OperatorFunction<Field> & _HermitianRBSolver; | ||||||
|     int CBfactorise; |     int CBfactorise; | ||||||
|     bool subGuess; |     bool subGuess; | ||||||
|  |     bool useSolnAsInitGuess; // if true user-supplied solution vector is used as initial guess for solver | ||||||
|   public: |   public: | ||||||
|  |  | ||||||
|     SchurRedBlackBase(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false)  : |     SchurRedBlackBase(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||||
|     _HermitianRBSolver(HermitianRBSolver)  |         const bool _solnAsInitGuess = false)  : | ||||||
|  |     _HermitianRBSolver(HermitianRBSolver), | ||||||
|  |     useSolnAsInitGuess(_solnAsInitGuess) | ||||||
|     {  |     {  | ||||||
|       CBfactorise = 0; |       CBfactorise = 0; | ||||||
|       subtractGuess(initSubGuess); |       subtractGuess(initSubGuess); | ||||||
| @@ -156,7 +159,11 @@ namespace Grid { | |||||||
|       if ( subGuess ) guess_save.resize(nblock,grid); |       if ( subGuess ) guess_save.resize(nblock,grid); | ||||||
|  |  | ||||||
|       for(int b=0;b<nblock;b++){ |       for(int b=0;b<nblock;b++){ | ||||||
|  |         if(useSolnAsInitGuess) { | ||||||
|  |           pickCheckerboard(Odd, sol_o[b], out[b]); | ||||||
|  |         } else { | ||||||
|           guess(src_o[b],sol_o[b]);  |           guess(src_o[b],sol_o[b]);  | ||||||
|  |         } | ||||||
|  |  | ||||||
| 	if ( subGuess ) {  | 	if ( subGuess ) {  | ||||||
| 	  guess_save[b] = sol_o[b]; | 	  guess_save[b] = sol_o[b]; | ||||||
| @@ -216,8 +223,11 @@ namespace Grid { | |||||||
|       //////////////////////////////// |       //////////////////////////////// | ||||||
|       // Construct the guess |       // Construct the guess | ||||||
|       //////////////////////////////// |       //////////////////////////////// | ||||||
|       Field   tmp(grid); |       if(useSolnAsInitGuess) { | ||||||
|  |         pickCheckerboard(Odd, sol_o, out); | ||||||
|  |       } else { | ||||||
|         guess(src_o,sol_o); |         guess(src_o,sol_o); | ||||||
|  |       } | ||||||
|  |  | ||||||
|       Field  guess_save(grid); |       Field  guess_save(grid); | ||||||
|       guess_save = sol_o; |       guess_save = sol_o; | ||||||
| @@ -251,7 +261,7 @@ namespace Grid { | |||||||
|     }      |     }      | ||||||
|      |      | ||||||
|     ///////////////////////////////////////////////////////////// |     ///////////////////////////////////////////////////////////// | ||||||
|     // Override in derived. Not virtual as template methods |     // Override in derived.  | ||||||
|     ///////////////////////////////////////////////////////////// |     ///////////////////////////////////////////////////////////// | ||||||
|     virtual void RedBlackSource  (Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)                =0; |     virtual void RedBlackSource  (Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)                =0; | ||||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol)          =0; |     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol)          =0; | ||||||
| @@ -264,8 +274,9 @@ namespace Grid { | |||||||
|   public: |   public: | ||||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; |     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|     SchurRedBlackStaggeredSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false)  |     SchurRedBlackStaggeredSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||||
|       :    SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess)  |         const bool _solnAsInitGuess = false)  | ||||||
|  |       :    SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess)  | ||||||
|     { |     { | ||||||
|     } |     } | ||||||
|  |  | ||||||
| @@ -286,9 +297,9 @@ namespace Grid { | |||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       // src_o = (source_o - Moe MeeInv source_e) |       // src_o = (source_o - Moe MeeInv source_e) | ||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.checkerboard ==Even); |       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.checkerboard ==Odd);      |       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||||
|       tmp=src_o-Mtmp;                  assert(  tmp.checkerboard ==Odd);      |       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||||
|  |  | ||||||
|       _Matrix.Mooee(tmp,src_o); // Extra factor of "m" in source from dumb choice of matrix norm. |       _Matrix.Mooee(tmp,src_o); // Extra factor of "m" in source from dumb choice of matrix norm. | ||||||
|     } |     } | ||||||
| @@ -306,17 +317,17 @@ namespace Grid { | |||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... |       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       _Matrix.Meooe(sol_o,tmp);        assert(  tmp.checkerboard   ==Even); |       _Matrix.Meooe(sol_o,tmp);        assert(  tmp.Checkerboard()   ==Even); | ||||||
|       src_e = src_e-tmp;               assert(  src_e.checkerboard ==Even); |       src_e = src_e-tmp;               assert(  src_e.Checkerboard() ==Even); | ||||||
|       _Matrix.MooeeInv(src_e,sol_e);   assert(  sol_e.checkerboard ==Even); |       _Matrix.MooeeInv(src_e,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||||
|       |       | ||||||
|       setCheckerboard(sol,sol_e); assert(  sol_e.checkerboard ==Even); |       setCheckerboard(sol,sol_e); assert(  sol_e.Checkerboard() ==Even); | ||||||
|       setCheckerboard(sol,sol_o); assert(  sol_o.checkerboard ==Odd ); |       setCheckerboard(sol,sol_o); assert(  sol_o.Checkerboard() ==Odd ); | ||||||
|     } |     } | ||||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) |     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||||
|     { |     { | ||||||
|       SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix); |       SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.checkerboard==Odd); |       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.Checkerboard()==Odd); | ||||||
|     }; |     }; | ||||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) |     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||||
|     { |     { | ||||||
| @@ -333,8 +344,9 @@ namespace Grid { | |||||||
|   public: |   public: | ||||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; |     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|     SchurRedBlackDiagMooeeSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false)   |     SchurRedBlackDiagMooeeSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||||
|       : SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess) {}; |         const bool _solnAsInitGuess = false)   | ||||||
|  |       : SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|  |  | ||||||
|     ////////////////////////////////////////////////////// |     ////////////////////////////////////////////////////// | ||||||
| @@ -354,13 +366,13 @@ namespace Grid { | |||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       // src_o = Mdag * (source_o - Moe MeeInv source_e) |       // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.checkerboard ==Even); |       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.checkerboard ==Odd);      |       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||||
|       tmp=src_o-Mtmp;                  assert(  tmp.checkerboard ==Odd);      |       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||||
|  |  | ||||||
|       // get the right MpcDag |       // get the right MpcDag | ||||||
|       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); |       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||||
|       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.checkerboard ==Odd);        |       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.Checkerboard() ==Odd);        | ||||||
|  |  | ||||||
|     } |     } | ||||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) |     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) | ||||||
| @@ -374,17 +386,17 @@ namespace Grid { | |||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... |       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       _Matrix.Meooe(sol_o,tmp);          assert(  tmp.checkerboard   ==Even); |       _Matrix.Meooe(sol_o,tmp);          assert(  tmp.Checkerboard()   ==Even); | ||||||
|       src_e_i = src_e-tmp;               assert(  src_e_i.checkerboard ==Even); |       src_e_i = src_e-tmp;               assert(  src_e_i.Checkerboard() ==Even); | ||||||
|       _Matrix.MooeeInv(src_e_i,sol_e);   assert(  sol_e.checkerboard ==Even); |       _Matrix.MooeeInv(src_e_i,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||||
|       |       | ||||||
|       setCheckerboard(sol,sol_e); assert(  sol_e.checkerboard ==Even); |       setCheckerboard(sol,sol_e); assert(  sol_e.Checkerboard() ==Even); | ||||||
|       setCheckerboard(sol,sol_o); assert(  sol_o.checkerboard ==Odd ); |       setCheckerboard(sol,sol_o); assert(  sol_o.Checkerboard() ==Odd ); | ||||||
|     } |     } | ||||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) |     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||||
|     { |     { | ||||||
|       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); |       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.checkerboard==Odd); |       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.Checkerboard()==Odd); | ||||||
|     }; |     }; | ||||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) |     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||||
|     { |     { | ||||||
| @@ -393,6 +405,70 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|  |   template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field>  | ||||||
|  |   { | ||||||
|  |     public: | ||||||
|  |       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|  |       NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||||
|  |           const bool _solnAsInitGuess = false)   | ||||||
|  |       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|  |       ////////////////////////////////////////////////////// | ||||||
|  |       // Override RedBlack specialisation | ||||||
|  |       ////////////////////////////////////////////////////// | ||||||
|  |       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field  tmp(grid); | ||||||
|  |         Field Mtmp(grid); | ||||||
|  |  | ||||||
|  |         pickCheckerboard(Even, src_e, src); | ||||||
|  |         pickCheckerboard(Odd , src_o, src); | ||||||
|  |  | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||||
|  |         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field     tmp(grid); | ||||||
|  |         Field   sol_e(grid); | ||||||
|  |         Field src_e_i(grid); | ||||||
|  |          | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         _Matrix.Meooe(sol_o, tmp);         assert(     tmp.Checkerboard() == Even ); | ||||||
|  |         src_e_i = src_e - tmp;             assert( src_e_i.Checkerboard() == Even ); | ||||||
|  |         _Matrix.MooeeInv(src_e_i, sol_e);  assert(   sol_e.Checkerboard() == Even ); | ||||||
|  |         | ||||||
|  |         setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even ); | ||||||
|  |         setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd  ); | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  assert(sol_o.Checkerboard() == Odd); | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||||
|  |       } | ||||||
|  |   }; | ||||||
|  |  | ||||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Site diagonal is identity, right preconditioned by Mee^inv |   // Site diagonal is identity, right preconditioned by Mee^inv | ||||||
|   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta |   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta | ||||||
| @@ -405,8 +481,9 @@ namespace Grid { | |||||||
|     ///////////////////////////////////////////////////// |     ///////////////////////////////////////////////////// | ||||||
|     // Wrap the usual normal equations Schur trick |     // Wrap the usual normal equations Schur trick | ||||||
|     ///////////////////////////////////////////////////// |     ///////////////////////////////////////////////////// | ||||||
|   SchurRedBlackDiagTwoSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false)   |   SchurRedBlackDiagTwoSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||||
|     : SchurRedBlackBase<Field>(HermitianRBSolver,initSubGuess) {}; |       const bool _solnAsInitGuess = false)   | ||||||
|  |     : SchurRedBlackBase<Field>(HermitianRBSolver,initSubGuess,_solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) |     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) | ||||||
|     { |     { | ||||||
| @@ -424,12 +501,12 @@ namespace Grid { | |||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       // src_o = Mdag * (source_o - Moe MeeInv source_e) |       // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|       ///////////////////////////////////////////////////// |       ///////////////////////////////////////////////////// | ||||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.checkerboard ==Even); |       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.checkerboard ==Odd);      |       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||||
|       tmp=src_o-Mtmp;                  assert(  tmp.checkerboard ==Odd);      |       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||||
|  |  | ||||||
|       // get the right MpcDag |       // get the right MpcDag | ||||||
|       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.checkerboard ==Odd);        |       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.Checkerboard() ==Odd);        | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) |     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) | ||||||
| @@ -450,12 +527,12 @@ namespace Grid { | |||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... |       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|       /////////////////////////////////////////////////// |       /////////////////////////////////////////////////// | ||||||
|       _Matrix.Meooe(sol_o_i,tmp);    assert(  tmp.checkerboard   ==Even); |       _Matrix.Meooe(sol_o_i,tmp);    assert(  tmp.Checkerboard()   ==Even); | ||||||
|       tmp = src_e-tmp;               assert(  src_e.checkerboard ==Even); |       tmp = src_e-tmp;               assert(  src_e.Checkerboard() ==Even); | ||||||
|       _Matrix.MooeeInv(tmp,sol_e);   assert(  sol_e.checkerboard ==Even); |       _Matrix.MooeeInv(tmp,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||||
|       |       | ||||||
|       setCheckerboard(sol,sol_e);    assert(  sol_e.checkerboard ==Even); |       setCheckerboard(sol,sol_e);    assert(  sol_e.Checkerboard() ==Even); | ||||||
|       setCheckerboard(sol,sol_o_i);  assert(  sol_o_i.checkerboard ==Odd ); |       setCheckerboard(sol,sol_o_i);  assert(  sol_o_i.Checkerboard() ==Odd ); | ||||||
|     }; |     }; | ||||||
|  |  | ||||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) |     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||||
| @@ -469,5 +546,76 @@ namespace Grid { | |||||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  |       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|  |   template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field>  | ||||||
|  |   { | ||||||
|  |     public: | ||||||
|  |       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||||
|  |  | ||||||
|  |       ///////////////////////////////////////////////////// | ||||||
|  |       // Wrap the usual normal equations Schur trick | ||||||
|  |       ///////////////////////////////////////////////////// | ||||||
|  |       NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||||
|  |           const bool _solnAsInitGuess = false)   | ||||||
|  |       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field  tmp(grid); | ||||||
|  |         Field Mtmp(grid); | ||||||
|  |  | ||||||
|  |         pickCheckerboard(Even, src_e, src); | ||||||
|  |         pickCheckerboard(Odd , src_o, src); | ||||||
|  |        | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||||
|  |         ///////////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||||
|  |         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||||
|       } |       } | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||||
|  |       { | ||||||
|  |         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||||
|  |         GridBase* fgrid = _Matrix.Grid(); | ||||||
|  |  | ||||||
|  |         Field sol_o_i(grid); | ||||||
|  |         Field     tmp(grid); | ||||||
|  |         Field   sol_e(grid); | ||||||
|  |  | ||||||
|  |         //////////////////////////////////////////////// | ||||||
|  |         // MooeeInv due to pecond | ||||||
|  |         //////////////////////////////////////////////// | ||||||
|  |         _Matrix.MooeeInv(sol_o, tmp); | ||||||
|  |         sol_o_i = tmp; | ||||||
|  |  | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||||
|  |         /////////////////////////////////////////////////// | ||||||
|  |         _Matrix.Meooe(sol_o_i, tmp);    assert(   tmp.Checkerboard() == Even ); | ||||||
|  |         tmp = src_e - tmp;              assert( src_e.Checkerboard() == Even ); | ||||||
|  |         _Matrix.MooeeInv(tmp, sol_e);   assert( sol_e.Checkerboard() == Even ); | ||||||
|  |         | ||||||
|  |         setCheckerboard(sol, sol_e);    assert(   sol_e.Checkerboard() == Even ); | ||||||
|  |         setCheckerboard(sol, sol_o_i);  assert( sol_o_i.Checkerboard() == Odd  ); | ||||||
|  |       }; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o); | ||||||
|  |       }; | ||||||
|  |  | ||||||
|  |       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o,  std::vector<Field>& sol_o) | ||||||
|  |       { | ||||||
|  |         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||||
|  |         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||||
|  |       } | ||||||
|  |   }; | ||||||
|  | } | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -26,107 +26,9 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef GRID_ALIGNED_ALLOCATOR_H | #pragma once | ||||||
| #define GRID_ALIGNED_ALLOCATOR_H |  | ||||||
|  |  | ||||||
| #ifdef HAVE_MALLOC_MALLOC_H | NAMESPACE_BEGIN(Grid); | ||||||
| #include <malloc/malloc.h> |  | ||||||
| #endif |  | ||||||
| #ifdef HAVE_MALLOC_H |  | ||||||
| #include <malloc.h> |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #ifdef HAVE_MM_MALLOC_H |  | ||||||
| #include <mm_malloc.h> |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| namespace Grid { |  | ||||||
|  |  | ||||||
|   class PointerCache { |  | ||||||
|   private: |  | ||||||
|  |  | ||||||
|     static const int Ncache=8; |  | ||||||
|     static int victim; |  | ||||||
|  |  | ||||||
|     typedef struct {  |  | ||||||
|       void *address; |  | ||||||
|       size_t bytes; |  | ||||||
|       int valid; |  | ||||||
|     } PointerCacheEntry; |  | ||||||
|      |  | ||||||
|     static PointerCacheEntry Entries[Ncache]; |  | ||||||
|  |  | ||||||
|   public: |  | ||||||
|  |  | ||||||
|  |  | ||||||
|     static void *Insert(void *ptr,size_t bytes) ; |  | ||||||
|     static void *Lookup(size_t bytes) ; |  | ||||||
|  |  | ||||||
|   }; |  | ||||||
|    |  | ||||||
|   std::string sizeString(size_t bytes); |  | ||||||
|  |  | ||||||
|   struct MemoryStats |  | ||||||
|   { |  | ||||||
|     size_t totalAllocated{0}, maxAllocated{0},  |  | ||||||
|            currentlyAllocated{0}, totalFreed{0}; |  | ||||||
|   }; |  | ||||||
|      |  | ||||||
|   class MemoryProfiler |  | ||||||
|   { |  | ||||||
|   public: |  | ||||||
|     static MemoryStats *stats; |  | ||||||
|     static bool        debug; |  | ||||||
|   }; |  | ||||||
|  |  | ||||||
|   #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" |  | ||||||
|   #define profilerDebugPrint \ |  | ||||||
|   if (MemoryProfiler::stats)\ |  | ||||||
|   {\ |  | ||||||
|     auto s = MemoryProfiler::stats;\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl;\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ |  | ||||||
|               << std::endl;\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ |  | ||||||
|               << std::endl;\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ |  | ||||||
|               << std::endl;\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ |  | ||||||
|               << std::endl;\ |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   #define profilerAllocate(bytes)\ |  | ||||||
|   if (MemoryProfiler::stats)\ |  | ||||||
|   {\ |  | ||||||
|     auto s = MemoryProfiler::stats;\ |  | ||||||
|     s->totalAllocated     += (bytes);\ |  | ||||||
|     s->currentlyAllocated += (bytes);\ |  | ||||||
|     s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated);\ |  | ||||||
|   }\ |  | ||||||
|   if (MemoryProfiler::debug)\ |  | ||||||
|   {\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl;\ |  | ||||||
|     profilerDebugPrint;\ |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   #define profilerFree(bytes)\ |  | ||||||
|   if (MemoryProfiler::stats)\ |  | ||||||
|   {\ |  | ||||||
|     auto s = MemoryProfiler::stats;\ |  | ||||||
|     s->totalFreed         += (bytes);\ |  | ||||||
|     s->currentlyAllocated -= (bytes);\ |  | ||||||
|   }\ |  | ||||||
|   if (MemoryProfiler::debug)\ |  | ||||||
|   {\ |  | ||||||
|     std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl;\ |  | ||||||
|     profilerDebugPrint;\ |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   void check_huge_pages(void *Buf,uint64_t BYTES); |  | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////// |  | ||||||
| // A lattice of something, but assume the something is SIMDized. |  | ||||||
| //////////////////////////////////////////////////////////////////// |  | ||||||
|  |  | ||||||
| template<typename _Tp> | template<typename _Tp> | ||||||
| class alignedAllocator { | class alignedAllocator { | ||||||
| @@ -151,68 +53,31 @@ public: | |||||||
|   {  |   {  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |     size_type bytes = __n*sizeof(_Tp); | ||||||
|     profilerAllocate(bytes); |     profilerAllocate(bytes); | ||||||
|  |     _Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes); | ||||||
|     _Tp *ptr = (_Tp *) PointerCache::Lookup(bytes); |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
|     //    if ( ptr != NULL )  |  | ||||||
|     //      std::cout << "alignedAllocator "<<__n << " cache hit "<< std::hex << ptr <<std::dec <<std::endl; |  | ||||||
|  |  | ||||||
|     ////////////////// |  | ||||||
|     // Hack 2MB align; could make option probably doesn't need configurability |  | ||||||
|     ////////////////// |  | ||||||
| //define GRID_ALLOC_ALIGN (128) |  | ||||||
| #define GRID_ALLOC_ALIGN (2*1024*1024) |  | ||||||
| #ifdef HAVE_MM_MALLOC_H |  | ||||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) _mm_malloc(bytes,GRID_ALLOC_ALIGN); |  | ||||||
| #else |  | ||||||
|     if ( ptr == (_Tp *) NULL ) ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN,bytes); |  | ||||||
| #endif |  | ||||||
|     //    std::cout << "alignedAllocator " << std::hex << ptr <<std::dec <<std::endl; |  | ||||||
|     // First touch optimise in threaded loop |  | ||||||
|     uint8_t *cp = (uint8_t *)ptr; |  | ||||||
| #ifdef GRID_OMP |  | ||||||
| #pragma omp parallel for |  | ||||||
| #endif |  | ||||||
|     for(size_type n=0;n<bytes;n+=4096){ |  | ||||||
|       cp[n]=0; |  | ||||||
|     } |  | ||||||
|     return ptr; |     return ptr; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   void deallocate(pointer __p, size_type __n) {  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|     size_type bytes = __n * sizeof(_Tp); |     size_type bytes = __n * sizeof(_Tp); | ||||||
|  |  | ||||||
|     profilerFree(bytes); |     profilerFree(bytes); | ||||||
|  |     MemoryManager::CpuFree((void *)__p,bytes); | ||||||
|     pointer __freeme = (pointer)PointerCache::Insert((void *)__p,bytes); |  | ||||||
|  |  | ||||||
| #ifdef HAVE_MM_MALLOC_H |  | ||||||
|     if ( __freeme ) _mm_free((void *)__freeme);  |  | ||||||
| #else |  | ||||||
|     if ( __freeme ) free((void *)__freeme); |  | ||||||
| #endif |  | ||||||
|   } |   } | ||||||
|   void construct(pointer __p, const _Tp& __val) { }; |  | ||||||
|  |   // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop | ||||||
|  |   void construct(pointer __p, const _Tp& __val) { assert(0);}; | ||||||
|   void construct(pointer __p) { }; |   void construct(pointer __p) { }; | ||||||
|   void destroy(pointer __p) { }; |   void destroy(pointer __p) { }; | ||||||
| }; | }; | ||||||
| template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | ||||||
| template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // MPI3 : comms must use shm region | // Unified virtual memory | ||||||
| // SHMEM: comms must use symmetric heap | ////////////////////////////////////////////////////////////////////////////////////// | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
| #ifdef GRID_COMMS_SHMEM |  | ||||||
| extern "C" {  |  | ||||||
| #include <mpp/shmem.h> |  | ||||||
| extern void * shmem_align(size_t, size_t); |  | ||||||
| extern void  shmem_free(void *); |  | ||||||
| } |  | ||||||
| #define PARANOID_SYMMETRIC_HEAP |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| template<typename _Tp> | template<typename _Tp> | ||||||
| class commAllocator { | class uvmAllocator { | ||||||
| public:  | public:  | ||||||
|   typedef std::size_t     size_type; |   typedef std::size_t     size_type; | ||||||
|   typedef std::ptrdiff_t  difference_type; |   typedef std::ptrdiff_t  difference_type; | ||||||
| @@ -222,94 +87,97 @@ public: | |||||||
|   typedef const _Tp& const_reference; |   typedef const _Tp& const_reference; | ||||||
|   typedef _Tp        value_type; |   typedef _Tp        value_type; | ||||||
|  |  | ||||||
|   template<typename _Tp1>  struct rebind { typedef commAllocator<_Tp1> other; }; |   template<typename _Tp1>  struct rebind { typedef uvmAllocator<_Tp1> other; }; | ||||||
|   commAllocator() throw() { } |   uvmAllocator() throw() { } | ||||||
|   commAllocator(const commAllocator&) throw() { } |   uvmAllocator(const uvmAllocator&) throw() { } | ||||||
|   template<typename _Tp1> commAllocator(const commAllocator<_Tp1>&) throw() { } |   template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { } | ||||||
|   ~commAllocator() throw() { } |   ~uvmAllocator() throw() { } | ||||||
|   pointer       address(reference __x)       const { return &__x; } |   pointer       address(reference __x)       const { return &__x; } | ||||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } |   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||||
|  |  | ||||||
| #ifdef GRID_COMMS_SHMEM |  | ||||||
|   pointer allocate(size_type __n, const void* _p= 0) |   pointer allocate(size_type __n, const void* _p= 0) | ||||||
|   {  |   {  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |     size_type bytes = __n*sizeof(_Tp); | ||||||
|  |  | ||||||
|     profilerAllocate(bytes); |     profilerAllocate(bytes); | ||||||
| #ifdef CRAY |     _Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes); | ||||||
|     _Tp *ptr = (_Tp *) shmem_align(bytes,64); |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
| #else |  | ||||||
|     _Tp *ptr = (_Tp *) shmem_align(64,bytes); |  | ||||||
| #endif |  | ||||||
| #ifdef PARANOID_SYMMETRIC_HEAP |  | ||||||
|     static void * bcast; |  | ||||||
|     static long  psync[_SHMEM_REDUCE_SYNC_SIZE]; |  | ||||||
|  |  | ||||||
|     bcast = (void *) ptr; |  | ||||||
|     shmem_broadcast32((void *)&bcast,(void *)&bcast,sizeof(void *)/4,0,0,0,shmem_n_pes(),psync); |  | ||||||
|  |  | ||||||
|     if ( bcast != ptr ) { |  | ||||||
|       std::printf("inconsistent alloc pe %d %lx %lx \n",shmem_my_pe(),bcast,ptr);std::fflush(stdout); |  | ||||||
|       //      BACKTRACEFILE(); |  | ||||||
|       exit(0); |  | ||||||
|     } |  | ||||||
|     assert( bcast == (void *) ptr); |  | ||||||
| #endif  |  | ||||||
|     return ptr; |     return ptr; | ||||||
|   } |   } | ||||||
|   void deallocate(pointer __p, size_type __n) {  |  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |  | ||||||
|  |  | ||||||
|  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n * sizeof(_Tp); | ||||||
|     profilerFree(bytes); |     profilerFree(bytes); | ||||||
|     shmem_free((void *)__p); |     MemoryManager::SharedFree((void *)__p,bytes); | ||||||
|   } |   } | ||||||
| #else |  | ||||||
|  |   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; | ||||||
|  |   void construct(pointer __p) { }; | ||||||
|  |   void destroy(pointer __p) { }; | ||||||
|  | }; | ||||||
|  | template<typename _Tp>  inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; } | ||||||
|  | template<typename _Tp>  inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Device memory | ||||||
|  | //////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template<typename _Tp> | ||||||
|  | class devAllocator { | ||||||
|  | public:  | ||||||
|  |   typedef std::size_t     size_type; | ||||||
|  |   typedef std::ptrdiff_t  difference_type; | ||||||
|  |   typedef _Tp*       pointer; | ||||||
|  |   typedef const _Tp* const_pointer; | ||||||
|  |   typedef _Tp&       reference; | ||||||
|  |   typedef const _Tp& const_reference; | ||||||
|  |   typedef _Tp        value_type; | ||||||
|  |  | ||||||
|  |   template<typename _Tp1>  struct rebind { typedef devAllocator<_Tp1> other; }; | ||||||
|  |   devAllocator() throw() { } | ||||||
|  |   devAllocator(const devAllocator&) throw() { } | ||||||
|  |   template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { } | ||||||
|  |   ~devAllocator() throw() { } | ||||||
|  |   pointer       address(reference __x)       const { return &__x; } | ||||||
|  |   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||||
|  |  | ||||||
|   pointer allocate(size_type __n, const void* _p= 0) |   pointer allocate(size_type __n, const void* _p= 0) | ||||||
|   {  |   {  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |     size_type bytes = __n*sizeof(_Tp); | ||||||
|      |  | ||||||
|     profilerAllocate(bytes); |     profilerAllocate(bytes); | ||||||
| #ifdef HAVE_MM_MALLOC_H |     _Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes); | ||||||
|     _Tp * ptr = (_Tp *) _mm_malloc(bytes, GRID_ALLOC_ALIGN); |     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||||
| #else |  | ||||||
|     _Tp * ptr = (_Tp *) memalign(GRID_ALLOC_ALIGN, bytes); |  | ||||||
| #endif |  | ||||||
|     uint8_t *cp = (uint8_t *)ptr; |  | ||||||
|     if ( ptr ) {  |  | ||||||
|     // One touch per 4k page, static OMP loop to catch same loop order |  | ||||||
| #ifdef GRID_OMP |  | ||||||
| #pragma omp parallel for schedule(static) |  | ||||||
| #endif |  | ||||||
|       for(size_type n=0;n<bytes;n+=4096){ |  | ||||||
| 	cp[n]=0; |  | ||||||
|       } |  | ||||||
|     } |  | ||||||
|     return ptr; |     return ptr; | ||||||
|   } |   } | ||||||
|   void deallocate(pointer __p, size_type __n) { |  | ||||||
|     size_type bytes = __n*sizeof(_Tp); |  | ||||||
|  |  | ||||||
|  |   void deallocate(pointer __p, size_type __n)  | ||||||
|  |   {  | ||||||
|  |     size_type bytes = __n * sizeof(_Tp); | ||||||
|     profilerFree(bytes); |     profilerFree(bytes); | ||||||
| #ifdef HAVE_MM_MALLOC_H |     MemoryManager::AcceleratorFree((void *)__p,bytes); | ||||||
|     _mm_free((void *)__p);  |  | ||||||
| #else |  | ||||||
|     free((void *)__p); |  | ||||||
| #endif |  | ||||||
|   } |   } | ||||||
| #endif |  | ||||||
|   void construct(pointer __p, const _Tp& __val) { }; |   void construct(pointer __p, const _Tp& __val) { }; | ||||||
|   void construct(pointer __p) { }; |   void construct(pointer __p) { }; | ||||||
|   void destroy(pointer __p) { }; |   void destroy(pointer __p) { }; | ||||||
| }; | }; | ||||||
| template<typename _Tp>  inline bool operator==(const commAllocator<_Tp>&, const commAllocator<_Tp>&){ return true; } | template<typename _Tp>  inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; } | ||||||
| template<typename _Tp>  inline bool operator!=(const commAllocator<_Tp>&, const commAllocator<_Tp>&){ return false; } | template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; } | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////// | ||||||
| // Template typedefs | // Template typedefs | ||||||
| //////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class T> using Vector     = std::vector<T,alignedAllocator<T> >;            | #ifdef ACCELERATOR_CSHIFT | ||||||
| template<class T> using commVector = std::vector<T,commAllocator<T> >;               | // Cshift on device | ||||||
| template<class T> using Matrix     = std::vector<std::vector<T,alignedAllocator<T> > >; | template<class T> using cshiftAllocator = devAllocator<T>; | ||||||
|      | #else | ||||||
| }; // namespace Grid | // Cshift on host | ||||||
|  | template<class T> using cshiftAllocator = std::allocator<T>; | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  | template<class T> using Vector        = std::vector<T,uvmAllocator<T> >;            | ||||||
|  | template<class T> using stencilVector = std::vector<T,alignedAllocator<T> >;            | ||||||
|  | template<class T> using commVector = std::vector<T,devAllocator<T> >; | ||||||
|  | template<class T> using cshiftVector = std::vector<T,cshiftAllocator<T> >; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | |||||||
|  | #pragma once | ||||||
|  | #include <Grid/allocator/MemoryStats.h> | ||||||
|  | #include <Grid/allocator/MemoryManager.h> | ||||||
|  | #include <Grid/allocator/AlignedAllocator.h> | ||||||
							
								
								
									
										254
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										254
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,254 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | /*Allocation types, saying which pointer cache should be used*/ | ||||||
|  | #define Cpu      (0) | ||||||
|  | #define CpuSmall (1) | ||||||
|  | #define Acc      (2) | ||||||
|  | #define AccSmall (3) | ||||||
|  | #define Shared   (4) | ||||||
|  | #define SharedSmall (5) | ||||||
|  | uint64_t total_shared; | ||||||
|  | uint64_t total_device; | ||||||
|  | uint64_t total_host;; | ||||||
|  | void MemoryManager::PrintBytes(void) | ||||||
|  | { | ||||||
|  |   std::cout << " MemoryManager : "<<total_shared<<" shared      bytes "<<std::endl; | ||||||
|  |   std::cout << " MemoryManager : "<<total_device<<" accelerator bytes "<<std::endl; | ||||||
|  |   std::cout << " MemoryManager : "<<total_host  <<" cpu         bytes "<<std::endl; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | // Data tables for recently freed pooiniter caches | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax]; | ||||||
|  | int MemoryManager::Victim[MemoryManager::NallocType]; | ||||||
|  | int MemoryManager::Ncache[MemoryManager::NallocType] = { 8, 32, 8, 32, 8, 32 }; | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | // Actual allocation and deallocation utils | ||||||
|  | ////////////////////////////////////////////////////////////////////// | ||||||
|  | void *MemoryManager::AcceleratorAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Acc); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocDevice(bytes); | ||||||
|  |     total_device+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::AcceleratorFree    (void *ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   void *__freeme = Insert(ptr,bytes,Acc); | ||||||
|  |   if ( __freeme ) { | ||||||
|  |     acceleratorFreeDevice(__freeme); | ||||||
|  |     total_device-=bytes; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void *MemoryManager::SharedAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Shared); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocShared(bytes); | ||||||
|  |     total_shared+=bytes; | ||||||
|  |     //    std::cout <<"AcceleratorAllocate: allocated Shared pointer "<<std::hex<<ptr<<std::dec<<std::endl; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::SharedFree    (void *ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   void *__freeme = Insert(ptr,bytes,Shared); | ||||||
|  |   if ( __freeme ) { | ||||||
|  |     acceleratorFreeShared(__freeme); | ||||||
|  |     total_shared-=bytes; | ||||||
|  |     //    PrintBytes(); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #ifdef GRID_UVM | ||||||
|  | void *MemoryManager::CpuAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Cpu); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocShared(bytes); | ||||||
|  |     total_host+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   NotifyDeletion(_ptr); | ||||||
|  |   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||||
|  |   if ( __freeme ) {  | ||||||
|  |     acceleratorFreeShared(__freeme); | ||||||
|  |     total_host-=bytes; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #else | ||||||
|  | void *MemoryManager::CpuAllocate(size_t bytes) | ||||||
|  | { | ||||||
|  |   void *ptr = (void *) Lookup(bytes,Cpu); | ||||||
|  |   if ( ptr == (void *) NULL ) { | ||||||
|  |     ptr = (void *) acceleratorAllocCpu(bytes); | ||||||
|  |     total_host+=bytes; | ||||||
|  |   } | ||||||
|  |   return ptr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||||
|  | { | ||||||
|  |   NotifyDeletion(_ptr); | ||||||
|  |   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||||
|  |   if ( __freeme ) {  | ||||||
|  |     acceleratorFreeCpu(__freeme); | ||||||
|  |     total_host-=bytes; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////// | ||||||
|  | // call only once | ||||||
|  | ////////////////////////////////////////// | ||||||
|  | void MemoryManager::Init(void) | ||||||
|  | { | ||||||
|  |  | ||||||
|  |   char * str; | ||||||
|  |   int Nc; | ||||||
|  |   int NcS; | ||||||
|  |    | ||||||
|  |   str= getenv("GRID_ALLOC_NCACHE_LARGE"); | ||||||
|  |   if ( str ) { | ||||||
|  |     Nc = atoi(str); | ||||||
|  |     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||||
|  |       Ncache[Cpu]=Nc; | ||||||
|  |       Ncache[Acc]=Nc; | ||||||
|  |       Ncache[Shared]=Nc; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   str= getenv("GRID_ALLOC_NCACHE_SMALL"); | ||||||
|  |   if ( str ) { | ||||||
|  |     Nc = atoi(str); | ||||||
|  |     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||||
|  |       Ncache[CpuSmall]=Nc; | ||||||
|  |       Ncache[AccSmall]=Nc; | ||||||
|  |       Ncache[SharedSmall]=Nc; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::InitMessage(void) { | ||||||
|  |  | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |   std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl; | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl; | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<std::endl; | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  | #ifdef GRID_UVM | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #else | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_SYCL | ||||||
|  |   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl; | ||||||
|  | #endif | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Insert(void *ptr,size_t bytes,int type)  | ||||||
|  | { | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   bool small = (bytes < GRID_ALLOC_SMALL_LIMIT); | ||||||
|  |   int cache = type + small; | ||||||
|  |   return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache]);   | ||||||
|  | #else | ||||||
|  |   return ptr; | ||||||
|  | #endif | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim)  | ||||||
|  | { | ||||||
|  |   assert(ncache>0); | ||||||
|  | #ifdef GRID_OMP | ||||||
|  |   assert(omp_in_parallel()==0); | ||||||
|  | #endif  | ||||||
|  |  | ||||||
|  |   void * ret = NULL; | ||||||
|  |   int v = -1; | ||||||
|  |  | ||||||
|  |   for(int e=0;e<ncache;e++) { | ||||||
|  |     if ( entries[e].valid==0 ) { | ||||||
|  |       v=e;  | ||||||
|  |       break; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if ( v==-1 ) { | ||||||
|  |     v=victim; | ||||||
|  |     victim = (victim+1)%ncache; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if ( entries[v].valid ) { | ||||||
|  |     ret = entries[v].address; | ||||||
|  |     entries[v].valid = 0; | ||||||
|  |     entries[v].address = NULL; | ||||||
|  |     entries[v].bytes = 0; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   entries[v].address=ptr; | ||||||
|  |   entries[v].bytes  =bytes; | ||||||
|  |   entries[v].valid  =1; | ||||||
|  |  | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Lookup(size_t bytes,int type) | ||||||
|  | { | ||||||
|  | #ifdef ALLOCATION_CACHE | ||||||
|  |   bool small = (bytes < GRID_ALLOC_SMALL_LIMIT); | ||||||
|  |   int cache = type+small; | ||||||
|  |   return Lookup(bytes,Entries[cache],Ncache[cache]); | ||||||
|  | #else | ||||||
|  |   return NULL; | ||||||
|  | #endif | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache)  | ||||||
|  | { | ||||||
|  |   assert(ncache>0); | ||||||
|  | #ifdef GRID_OMP | ||||||
|  |   assert(omp_in_parallel()==0); | ||||||
|  | #endif  | ||||||
|  |   for(int e=0;e<ncache;e++){ | ||||||
|  |     if ( entries[e].valid && ( entries[e].bytes == bytes ) ) { | ||||||
|  |       entries[e].valid = 0; | ||||||
|  |       return entries[e].address; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   return NULL; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
							
								
								
									
										180
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
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							| @@ -0,0 +1,180 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/MemoryManager.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  | #include <list>  | ||||||
|  | #include <unordered_map>   | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | // Move control to configure.ac and Config.h? | ||||||
|  |  | ||||||
|  | #define GRID_ALLOC_SMALL_LIMIT (4096) | ||||||
|  |  | ||||||
|  | /*Pinning pages is costly*/ | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Advise the LatticeAccelerator class | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | enum ViewAdvise { | ||||||
|  |  AdviseDefault       = 0x0,    // Regular data | ||||||
|  |  AdviseInfrequentUse = 0x1     // Advise that the data is used infrequently.  This can | ||||||
|  |                                // significantly influence performance of bulk storage. | ||||||
|  |   | ||||||
|  |  // AdviseTransient      = 0x2,   // Data will mostly be read.  On some architectures | ||||||
|  |                                // enables read-only copies of memory to be kept on | ||||||
|  |                                // host and device. | ||||||
|  |  | ||||||
|  |  // AdviseAcceleratorWriteDiscard = 0x4  // Field will be written in entirety on device | ||||||
|  |  | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View Access Mode | ||||||
|  | //////////////////////////////////////////////////////////////////////////// | ||||||
|  | enum ViewMode { | ||||||
|  |   AcceleratorRead  = 0x01, | ||||||
|  |   AcceleratorWrite = 0x02, | ||||||
|  |   AcceleratorWriteDiscard = 0x04, | ||||||
|  |   CpuRead  = 0x08, | ||||||
|  |   CpuWrite = 0x10, | ||||||
|  |   CpuWriteDiscard = 0x10 // same for now | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | class MemoryManager { | ||||||
|  | private: | ||||||
|  |  | ||||||
|  |   //////////////////////////////////////////////////////////// | ||||||
|  |   // For caching recently freed allocations | ||||||
|  |   //////////////////////////////////////////////////////////// | ||||||
|  |   typedef struct {  | ||||||
|  |     void *address; | ||||||
|  |     size_t bytes; | ||||||
|  |     int valid; | ||||||
|  |   } AllocationCacheEntry; | ||||||
|  |  | ||||||
|  |   static const int NallocCacheMax=128;  | ||||||
|  |   static const int NallocType=6; | ||||||
|  |   static AllocationCacheEntry Entries[NallocType][NallocCacheMax]; | ||||||
|  |   static int Victim[NallocType]; | ||||||
|  |   static int Ncache[NallocType]; | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   // Free pool | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   static void *Insert(void *ptr,size_t bytes,int type) ; | ||||||
|  |   static void *Lookup(size_t bytes,int type) ; | ||||||
|  |   static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim) ; | ||||||
|  |   static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache) ; | ||||||
|  |  | ||||||
|  |   static void PrintBytes(void); | ||||||
|  |  public: | ||||||
|  |   static void Init(void); | ||||||
|  |   static void InitMessage(void); | ||||||
|  |   static void *AcceleratorAllocate(size_t bytes); | ||||||
|  |   static void  AcceleratorFree    (void *ptr,size_t bytes); | ||||||
|  |   static void *SharedAllocate(size_t bytes); | ||||||
|  |   static void  SharedFree    (void *ptr,size_t bytes); | ||||||
|  |   static void *CpuAllocate(size_t bytes); | ||||||
|  |   static void  CpuFree    (void *ptr,size_t bytes); | ||||||
|  |  | ||||||
|  |   //////////////////////////////////////////////////////// | ||||||
|  |   // Footprint tracking | ||||||
|  |   //////////////////////////////////////////////////////// | ||||||
|  |   static uint64_t     DeviceBytes; | ||||||
|  |   static uint64_t     DeviceLRUBytes; | ||||||
|  |   static uint64_t     DeviceMaxBytes; | ||||||
|  |   static uint64_t     HostToDeviceBytes; | ||||||
|  |   static uint64_t     DeviceToHostBytes; | ||||||
|  |   static uint64_t     HostToDeviceXfer; | ||||||
|  |   static uint64_t     DeviceToHostXfer; | ||||||
|  |   | ||||||
|  |  private: | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |   ////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Data tables for ViewCache | ||||||
|  |   ////////////////////////////////////////////////////////////////////// | ||||||
|  |   typedef std::list<uint64_t> LRU_t; | ||||||
|  |   typedef typename LRU_t::iterator LRUiterator; | ||||||
|  |   typedef struct {  | ||||||
|  |     int        LRU_valid; | ||||||
|  |     LRUiterator LRU_entry; | ||||||
|  |     uint64_t CpuPtr; | ||||||
|  |     uint64_t AccPtr; | ||||||
|  |     size_t   bytes; | ||||||
|  |     uint32_t transient; | ||||||
|  |     uint32_t state; | ||||||
|  |     uint32_t accLock; | ||||||
|  |     uint32_t cpuLock; | ||||||
|  |   } AcceleratorViewEntry; | ||||||
|  |    | ||||||
|  |   typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t; | ||||||
|  |   typedef typename AccViewTable_t::iterator AccViewTableIterator ; | ||||||
|  |  | ||||||
|  |   static AccViewTable_t AccViewTable; | ||||||
|  |   static LRU_t LRU; | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   // Device motion | ||||||
|  |   ///////////////////////////////////////////////// | ||||||
|  |   static void  Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void  EvictVictims(uint64_t bytes); // Frees up <bytes> | ||||||
|  |   static void  Evict(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  Flush(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  Clone(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  AccDiscard(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  CpuDiscard(AcceleratorViewEntry &AccCache); | ||||||
|  |  | ||||||
|  |   //  static void  LRUupdate(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  LRUinsert(AcceleratorViewEntry &AccCache); | ||||||
|  |   static void  LRUremove(AcceleratorViewEntry &AccCache); | ||||||
|  |    | ||||||
|  |   // manage entries in the table | ||||||
|  |   static int                  EntryPresent(uint64_t CpuPtr); | ||||||
|  |   static void                 EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void                 EntryErase (uint64_t CpuPtr); | ||||||
|  |   static AccViewTableIterator EntryLookup(uint64_t CpuPtr); | ||||||
|  |   static void                 EntrySet   (uint64_t CpuPtr,AcceleratorViewEntry &entry); | ||||||
|  |  | ||||||
|  |   static void     AcceleratorViewClose(uint64_t AccPtr); | ||||||
|  |   static uint64_t AcceleratorViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |   static void     CpuViewClose(uint64_t Ptr); | ||||||
|  |   static uint64_t CpuViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  | #endif | ||||||
|  |   static void NotifyDeletion(void * CpuPtr); | ||||||
|  |  | ||||||
|  |  public: | ||||||
|  |   static void Print(void); | ||||||
|  |   static int   isOpen   (void* CpuPtr); | ||||||
|  |   static void  ViewClose(void* CpuPtr,ViewMode mode); | ||||||
|  |   static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||||
|  |  | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
							
								
								
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										478
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
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							| @@ -0,0 +1,478 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  | #ifndef GRID_UVM | ||||||
|  |  | ||||||
|  | #warning "Using explicit device memory copies" | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | //define dprintf(...) printf ( __VA_ARGS__ ); fflush(stdout); | ||||||
|  | #define dprintf(...) | ||||||
|  |  | ||||||
|  |  | ||||||
|  | //////////////////////////////////////////////////////////// | ||||||
|  | // For caching copies of data on device | ||||||
|  | //////////////////////////////////////////////////////////// | ||||||
|  | MemoryManager::AccViewTable_t MemoryManager::AccViewTable; | ||||||
|  | MemoryManager::LRU_t MemoryManager::LRU; | ||||||
|  |    | ||||||
|  | //////////////////////////////////////////////////////// | ||||||
|  | // Footprint tracking | ||||||
|  | //////////////////////////////////////////////////////// | ||||||
|  | uint64_t  MemoryManager::DeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceLRUBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostBytes; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceXfer; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostXfer; | ||||||
|  |  | ||||||
|  | //////////////////////////////////// | ||||||
|  | // Priority ordering for unlocked entries | ||||||
|  | //  Empty | ||||||
|  | //  CpuDirty  | ||||||
|  | //  Consistent | ||||||
|  | //  AccDirty | ||||||
|  | //////////////////////////////////// | ||||||
|  | #define Empty         (0x0)  /*Entry unoccupied  */ | ||||||
|  | #define CpuDirty      (0x1)  /*CPU copy is golden, Acc buffer MAY not be allocated*/ | ||||||
|  | #define Consistent    (0x2)  /*ACC copy AND CPU copy are valid */ | ||||||
|  | #define AccDirty      (0x4)  /*ACC copy is golden */ | ||||||
|  | #define EvictNext     (0x8)  /*Priority for eviction*/ | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | // Mechanics of data table maintenance | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | int   MemoryManager::EntryPresent(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   if(AccViewTable.empty()) return 0; | ||||||
|  |  | ||||||
|  |   auto count = AccViewTable.count(CpuPtr);  assert((count==0)||(count==1)); | ||||||
|  |   return count; | ||||||
|  | } | ||||||
|  | void  MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   assert(!EntryPresent(CpuPtr)); | ||||||
|  |   AcceleratorViewEntry AccCache; | ||||||
|  |   AccCache.CpuPtr = CpuPtr; | ||||||
|  |   AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |   AccCache.bytes  = bytes; | ||||||
|  |   AccCache.state  = CpuDirty; | ||||||
|  |   AccCache.LRU_valid=0; | ||||||
|  |   AccCache.transient=0; | ||||||
|  |   AccCache.accLock=0; | ||||||
|  |   AccCache.cpuLock=0; | ||||||
|  |   AccViewTable[CpuPtr] = AccCache; | ||||||
|  | } | ||||||
|  | MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   assert(EntryPresent(CpuPtr)); | ||||||
|  |   auto AccCacheIterator = AccViewTable.find(CpuPtr); | ||||||
|  |   assert(AccCacheIterator!=AccViewTable.end()); | ||||||
|  |   return AccCacheIterator; | ||||||
|  | } | ||||||
|  | void MemoryManager::EntryErase(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCache = EntryLookup(CpuPtr); | ||||||
|  |   AccViewTable.erase(CpuPtr); | ||||||
|  | } | ||||||
|  | void  MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.LRU_valid==0); | ||||||
|  |   if (AccCache.transient) {  | ||||||
|  |     LRU.push_back(AccCache.CpuPtr); | ||||||
|  |     AccCache.LRU_entry = --LRU.end(); | ||||||
|  |   } else { | ||||||
|  |     LRU.push_front(AccCache.CpuPtr); | ||||||
|  |     AccCache.LRU_entry = LRU.begin(); | ||||||
|  |   } | ||||||
|  |   AccCache.LRU_valid = 1; | ||||||
|  |   DeviceLRUBytes+=AccCache.bytes; | ||||||
|  | } | ||||||
|  | void  MemoryManager::LRUremove(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.LRU_valid==1); | ||||||
|  |   LRU.erase(AccCache.LRU_entry); | ||||||
|  |   AccCache.LRU_valid = 0; | ||||||
|  |   DeviceLRUBytes-=AccCache.bytes; | ||||||
|  | } | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | // Accelerator cache motion & consistency logic | ||||||
|  | ///////////////////////////////////////////////// | ||||||
|  | void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   /////////////////////////////////////////////////////////// | ||||||
|  |   // Remove from Accelerator, remove entry, without flush | ||||||
|  |   // Cannot be locked. If allocated Must be in LRU pool. | ||||||
|  |   /////////////////////////////////////////////////////////// | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |    | ||||||
|  |    dprintf("MemoryManager: Discard(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr) { | ||||||
|  |     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |     DeviceBytes   -=AccCache.bytes; | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |     dprintf("MemoryManager: Free(%llx) LRU %lld Total %lld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);   | ||||||
|  |   } | ||||||
|  |   uint64_t CpuPtr = AccCache.CpuPtr; | ||||||
|  |   EntryErase(CpuPtr); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::Evict(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   /////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Make CPU consistent, remove from Accelerator, remove entry | ||||||
|  |   // Cannot be locked. If allocated must be in LRU pool. | ||||||
|  |   /////////////////////////////////////////////////////////////////////////// | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |    | ||||||
|  |   dprintf("MemoryManager: Evict(%llx) %llx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   if(AccCache.state==AccDirty) { | ||||||
|  |     Flush(AccCache); | ||||||
|  |   } | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr) { | ||||||
|  |     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |     DeviceBytes   -=AccCache.bytes; | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |     dprintf("MemoryManager: Free(%llx) footprint now %lld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);   | ||||||
|  |   } | ||||||
|  |   uint64_t CpuPtr = AccCache.CpuPtr; | ||||||
|  |   EntryErase(CpuPtr); | ||||||
|  | } | ||||||
|  | void MemoryManager::Flush(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state==AccDirty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.AccPtr!=(uint64_t)NULL); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes); | ||||||
|  |   dprintf("MemoryManager: Flush  %llx -> %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||||
|  |   DeviceToHostBytes+=AccCache.bytes; | ||||||
|  |   DeviceToHostXfer++; | ||||||
|  |   AccCache.state=Consistent; | ||||||
|  | } | ||||||
|  | void MemoryManager::Clone(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state==CpuDirty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||||
|  |     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||||
|  |     DeviceBytes+=AccCache.bytes; | ||||||
|  |   } | ||||||
|  |   dprintf("MemoryManager: Clone %llx <- %llx\n",(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||||
|  |   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes); | ||||||
|  |   HostToDeviceBytes+=AccCache.bytes; | ||||||
|  |   HostToDeviceXfer++; | ||||||
|  |   AccCache.state=Consistent; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache) | ||||||
|  | { | ||||||
|  |   assert(AccCache.state!=Empty); | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||||
|  |   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||||
|  |     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||||
|  |     DeviceBytes+=AccCache.bytes; | ||||||
|  |   } | ||||||
|  |   AccCache.state=AccDirty; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View management | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | void MemoryManager::ViewClose(void* Ptr,ViewMode mode) | ||||||
|  | { | ||||||
|  |   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||||
|  |     AcceleratorViewClose((uint64_t)Ptr); | ||||||
|  |   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||||
|  |     CpuViewClose((uint64_t)Ptr); | ||||||
|  |   } else {  | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||||
|  |   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||||
|  |     return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint); | ||||||
|  |   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||||
|  |     return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint); | ||||||
|  |   } else {  | ||||||
|  |     assert(0); | ||||||
|  |     return NULL; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void  MemoryManager::EvictVictims(uint64_t bytes) | ||||||
|  | { | ||||||
|  |   while(bytes+DeviceLRUBytes > DeviceMaxBytes){ | ||||||
|  |     if ( DeviceLRUBytes > 0){ | ||||||
|  |       assert(LRU.size()>0); | ||||||
|  |       uint64_t victim = LRU.back(); | ||||||
|  |       auto AccCacheIterator = EntryLookup(victim); | ||||||
|  |       auto & AccCache = AccCacheIterator->second; | ||||||
|  |       Evict(AccCache); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||||
|  | { | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Find if present, otherwise get or force an empty | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   if ( EntryPresent(CpuPtr)==0 ){ | ||||||
|  |     EntryCreate(CpuPtr,bytes,mode,hint); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |   if (!AccCache.AccPtr) { | ||||||
|  |     EvictVictims(bytes);  | ||||||
|  |   }  | ||||||
|  |   assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)); | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock==0);  // Programming error | ||||||
|  |  | ||||||
|  |   if(AccCache.state!=Empty) { | ||||||
|  |     dprintf("ViewOpen found entry %llx %llx : %lld %lld\n", | ||||||
|  | 		    (uint64_t)AccCache.CpuPtr, | ||||||
|  | 		    (uint64_t)CpuPtr, | ||||||
|  | 		    (uint64_t)AccCache.bytes, | ||||||
|  | 		    (uint64_t)bytes); | ||||||
|  |     assert(AccCache.CpuPtr == CpuPtr); | ||||||
|  |     assert(AccCache.bytes  ==bytes); | ||||||
|  |   } | ||||||
|  | /* | ||||||
|  |  *  State transitions and actions | ||||||
|  |  * | ||||||
|  |  *  Action  State   StateNext         Flush    Clone | ||||||
|  |  * | ||||||
|  |  *  AccRead  Empty   Consistent        -        Y | ||||||
|  |  *  AccWrite Empty   AccDirty          -        Y | ||||||
|  |  *  AccRead  CpuDirty Consistent       -        Y | ||||||
|  |  *  AccWrite CpuDirty AccDirty         -        Y | ||||||
|  |  *  AccRead  Consistent Consistent     -        -  | ||||||
|  |  *  AccWrite Consistent AccDirty       -        -  | ||||||
|  |  *  AccRead  AccDirty   AccDirty       -        -  | ||||||
|  |  *  AccWrite AccDirty   AccDirty       -        -  | ||||||
|  |  */ | ||||||
|  |   if(AccCache.state==Empty) { | ||||||
|  |     assert(AccCache.LRU_valid==0); | ||||||
|  |     AccCache.CpuPtr = CpuPtr; | ||||||
|  |     AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |     AccCache.bytes  = bytes; | ||||||
|  |     AccCache.state  = CpuDirty;   // Cpu starts primary | ||||||
|  |     if(mode==AcceleratorWriteDiscard){ | ||||||
|  |       CpuDiscard(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else if(mode==AcceleratorWrite){ | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = Consistent; // Empty + AccRead => Consistent | ||||||
|  |     } | ||||||
|  |     AccCache.accLock= 1; | ||||||
|  |   } else if(AccCache.state==CpuDirty ){ | ||||||
|  |     if(mode==AcceleratorWriteDiscard) { | ||||||
|  |       CpuDiscard(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else if(mode==AcceleratorWrite) { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     } else { | ||||||
|  |       Clone(AccCache); | ||||||
|  |       AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent | ||||||
|  |     } | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("Copied CpuDirty entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else if(AccCache.state==Consistent) { | ||||||
|  |     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||||
|  |       AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty | ||||||
|  |     else | ||||||
|  |       AccCache.state  = Consistent; // Consistent + AccRead => Consistent | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("Consistent entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else if(AccCache.state==AccDirty) { | ||||||
|  |     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||||
|  |       AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty | ||||||
|  |     else | ||||||
|  |       AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty | ||||||
|  |     AccCache.accLock++; | ||||||
|  |     dprintf("AccDirty entry into device accLock %d\n",AccCache.accLock); | ||||||
|  |   } else { | ||||||
|  |     assert(0); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   // If view is opened on device remove from LRU | ||||||
|  |   if(AccCache.LRU_valid==1){ | ||||||
|  |     // must possibly remove from LRU as now locked on GPU | ||||||
|  |     LRUremove(AccCache); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int transient =hint; | ||||||
|  |   AccCache.transient= transient? EvictNext : 0; | ||||||
|  |  | ||||||
|  |   return AccCache.AccPtr; | ||||||
|  | } | ||||||
|  | //////////////////////////////////// | ||||||
|  | // look up & decrement lock count | ||||||
|  | //////////////////////////////////// | ||||||
|  | void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock==0); | ||||||
|  |   assert(AccCache.accLock>0); | ||||||
|  |  | ||||||
|  |   AccCache.accLock--; | ||||||
|  |  | ||||||
|  |   // Move to LRU queue if not locked and close on device | ||||||
|  |   if(AccCache.accLock==0) { | ||||||
|  |     LRUinsert(AccCache); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void MemoryManager::CpuViewClose(uint64_t CpuPtr) | ||||||
|  | { | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   assert(AccCache.cpuLock>0); | ||||||
|  |   assert(AccCache.accLock==0); | ||||||
|  |  | ||||||
|  |   AccCache.cpuLock--; | ||||||
|  | } | ||||||
|  | /* | ||||||
|  |  *  Action  State   StateNext         Flush    Clone | ||||||
|  |  * | ||||||
|  |  *  CpuRead  Empty   CpuDirty          -        - | ||||||
|  |  *  CpuWrite Empty   CpuDirty          -        - | ||||||
|  |  *  CpuRead  CpuDirty CpuDirty         -        - | ||||||
|  |  *  CpuWrite CpuDirty CpuDirty         -        -  | ||||||
|  |  *  CpuRead  Consistent Consistent     -        -  | ||||||
|  |  *  CpuWrite Consistent CpuDirty       -        -  | ||||||
|  |  *  CpuRead  AccDirty   Consistent     Y        - | ||||||
|  |  *  CpuWrite AccDirty   CpuDirty       Y        - | ||||||
|  |  */ | ||||||
|  | uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient) | ||||||
|  | { | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Find if present, otherwise get or force an empty | ||||||
|  |   //////////////////////////////////////////////////////////////////////////// | ||||||
|  |   if ( EntryPresent(CpuPtr)==0 ){ | ||||||
|  |     EntryCreate(CpuPtr,bytes,mode,transient); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |   auto & AccCache = AccCacheIterator->second; | ||||||
|  |  | ||||||
|  |   if (!AccCache.AccPtr) { | ||||||
|  |      EvictVictims(bytes); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   assert((mode==CpuRead)||(mode==CpuWrite)); | ||||||
|  |   assert(AccCache.accLock==0);  // Programming error | ||||||
|  |  | ||||||
|  |   if(AccCache.state!=Empty) { | ||||||
|  |     assert(AccCache.CpuPtr == CpuPtr); | ||||||
|  |     assert(AccCache.bytes==bytes); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   if(AccCache.state==Empty) { | ||||||
|  |     AccCache.CpuPtr = CpuPtr; | ||||||
|  |     AccCache.AccPtr = (uint64_t)NULL; | ||||||
|  |     AccCache.bytes  = bytes; | ||||||
|  |     AccCache.state  = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty | ||||||
|  |     AccCache.accLock= 0; | ||||||
|  |     AccCache.cpuLock= 1; | ||||||
|  |   } else if(AccCache.state==CpuDirty ){ | ||||||
|  |     // AccPtr dont care, deferred allocate | ||||||
|  |     AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else if(AccCache.state==Consistent) { | ||||||
|  |     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||||
|  |     if(mode==CpuWrite) | ||||||
|  |       AccCache.state = CpuDirty;   // Consistent +CpuWrite => CpuDirty | ||||||
|  |     else  | ||||||
|  |       AccCache.state = Consistent; // Consistent +CpuRead  => Consistent | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else if(AccCache.state==AccDirty) { | ||||||
|  |     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||||
|  |     Flush(AccCache); | ||||||
|  |     if(mode==CpuWrite) AccCache.state = CpuDirty;   // AccDirty +CpuWrite => CpuDirty, Flush | ||||||
|  |     else            AccCache.state = Consistent; // AccDirty +CpuRead  => Consistent, Flush | ||||||
|  |     AccCache.cpuLock++; | ||||||
|  |   } else { | ||||||
|  |     assert(0); // should be unreachable | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   AccCache.transient= transient? EvictNext : 0; | ||||||
|  |  | ||||||
|  |   return AccCache.CpuPtr; | ||||||
|  | } | ||||||
|  | void  MemoryManager::NotifyDeletion(void *_ptr) | ||||||
|  | { | ||||||
|  |   // Look up in ViewCache | ||||||
|  |   uint64_t ptr = (uint64_t)_ptr; | ||||||
|  |   if(EntryPresent(ptr)) { | ||||||
|  |     auto e = EntryLookup(ptr); | ||||||
|  |     AccDiscard(e->second); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void  MemoryManager::Print(void) | ||||||
|  | { | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "Memory Manager                             " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceBytes   << " bytes allocated on device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceLRUBytes<< " bytes evictable on device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceMaxBytes<< " bytes max on device       " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << HostToDeviceXfer << " transfers        to   device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceToHostXfer << " transfers        from device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << HostToDeviceBytes<< " bytes transfered to   device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << DeviceToHostBytes<< " bytes transfered from device " << std::endl; | ||||||
|  |   std::cout << GridLogDebug << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||||
|  |     auto &AccCache = it->second; | ||||||
|  |      | ||||||
|  |     std::string str; | ||||||
|  |     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||||
|  |     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||||
|  |     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||||
|  |     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||||
|  |  | ||||||
|  |     std::cout << GridLogDebug << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||||
|  | 	      << "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||||
|  | 	      << "\t" << AccCache.cpuLock | ||||||
|  | 	      << "\t" << AccCache.accLock | ||||||
|  | 	      << "\t" << AccCache.LRU_valid<<std::endl; | ||||||
|  |   } | ||||||
|  |   std::cout << GridLogDebug << "--------------------------------------------" << std::endl; | ||||||
|  |  | ||||||
|  | }; | ||||||
|  | int   MemoryManager::isOpen   (void* _CpuPtr)  | ||||||
|  | {  | ||||||
|  |   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||||
|  |   if ( EntryPresent(CpuPtr) ){ | ||||||
|  |     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||||
|  |     auto & AccCache = AccCacheIterator->second; | ||||||
|  |     return AccCache.cpuLock+AccCache.accLock; | ||||||
|  |   } else {  | ||||||
|  |     return 0; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
							
								
								
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										23
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,23 @@ | |||||||
|  | #include <Grid/GridCore.h> | ||||||
|  | #ifdef GRID_UVM | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // View management is 1:1 address space mapping | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  | uint64_t  MemoryManager::DeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceLRUBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceBytes; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostBytes; | ||||||
|  | uint64_t  MemoryManager::HostToDeviceXfer; | ||||||
|  | uint64_t  MemoryManager::DeviceToHostXfer; | ||||||
|  |  | ||||||
|  | void  MemoryManager::ViewClose(void* AccPtr,ViewMode mode){}; | ||||||
|  | void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; }; | ||||||
|  | int   MemoryManager::isOpen   (void* CpuPtr) { return 0;} | ||||||
|  | void  MemoryManager::Print(void){}; | ||||||
|  | void  MemoryManager::NotifyDeletion(void *ptr){}; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  | #endif | ||||||
| @@ -1,70 +1,11 @@ | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
| #include <fcntl.h> | #include <fcntl.h> | ||||||
| 
 | 
 | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
| 
 | 
 | ||||||
| MemoryStats *MemoryProfiler::stats = nullptr; | MemoryStats *MemoryProfiler::stats = nullptr; | ||||||
| bool         MemoryProfiler::debug = false; | bool         MemoryProfiler::debug = false; | ||||||
| 
 | 
 | ||||||
| int PointerCache::victim; |  | ||||||
| 
 |  | ||||||
| PointerCache::PointerCacheEntry PointerCache::Entries[PointerCache::Ncache]; |  | ||||||
| 
 |  | ||||||
| void *PointerCache::Insert(void *ptr,size_t bytes) { |  | ||||||
| 
 |  | ||||||
|   if (bytes < 4096 ) return ptr; |  | ||||||
| 
 |  | ||||||
| #ifdef GRID_OMP |  | ||||||
|   assert(omp_in_parallel()==0); |  | ||||||
| #endif  |  | ||||||
| 
 |  | ||||||
|   void * ret = NULL; |  | ||||||
|   int v = -1; |  | ||||||
| 
 |  | ||||||
|   for(int e=0;e<Ncache;e++) { |  | ||||||
|     if ( Entries[e].valid==0 ) { |  | ||||||
|       v=e;  |  | ||||||
|       break; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   if ( v==-1 ) { |  | ||||||
|     v=victim; |  | ||||||
|     victim = (victim+1)%Ncache; |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   if ( Entries[v].valid ) { |  | ||||||
|     ret = Entries[v].address; |  | ||||||
|     Entries[v].valid = 0; |  | ||||||
|     Entries[v].address = NULL; |  | ||||||
|     Entries[v].bytes = 0; |  | ||||||
|   } |  | ||||||
| 
 |  | ||||||
|   Entries[v].address=ptr; |  | ||||||
|   Entries[v].bytes  =bytes; |  | ||||||
|   Entries[v].valid  =1; |  | ||||||
| 
 |  | ||||||
|   return ret; |  | ||||||
| } |  | ||||||
| 
 |  | ||||||
| void *PointerCache::Lookup(size_t bytes) { |  | ||||||
| 
 |  | ||||||
|  if (bytes < 4096 ) return NULL; |  | ||||||
| 
 |  | ||||||
| #ifdef _OPENMP |  | ||||||
|   assert(omp_in_parallel()==0); |  | ||||||
| #endif  |  | ||||||
| 
 |  | ||||||
|   for(int e=0;e<Ncache;e++){ |  | ||||||
|     if ( Entries[e].valid && ( Entries[e].bytes == bytes ) ) { |  | ||||||
|       Entries[e].valid = 0; |  | ||||||
|       return Entries[e].address; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|   return NULL; |  | ||||||
| } |  | ||||||
| 
 |  | ||||||
| 
 |  | ||||||
| void check_huge_pages(void *Buf,uint64_t BYTES) | void check_huge_pages(void *Buf,uint64_t BYTES) | ||||||
| { | { | ||||||
| #ifdef __linux__ | #ifdef __linux__ | ||||||
| @@ -122,4 +63,5 @@ std::string sizeString(const size_t bytes) | |||||||
|   return std::string(buf); |   return std::string(buf); | ||||||
| } | } | ||||||
| 
 | 
 | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  | 
 | ||||||
							
								
								
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,95 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/MemoryStats.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | std::string sizeString(size_t bytes); | ||||||
|  |  | ||||||
|  | struct MemoryStats | ||||||
|  | { | ||||||
|  |   size_t totalAllocated{0}, maxAllocated{0},  | ||||||
|  |     currentlyAllocated{0}, totalFreed{0}; | ||||||
|  | }; | ||||||
|  |      | ||||||
|  | class MemoryProfiler | ||||||
|  | { | ||||||
|  | public: | ||||||
|  |   static MemoryStats *stats; | ||||||
|  |   static bool        debug; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" | ||||||
|  | #define profilerDebugPrint						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ | ||||||
|  | 		<< std::endl;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | #define profilerAllocate(bytes)						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       s->totalAllocated     += (bytes);					\ | ||||||
|  |       s->currentlyAllocated += (bytes);					\ | ||||||
|  |       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ | ||||||
|  |     }									\ | ||||||
|  |   if (MemoryProfiler::debug)						\ | ||||||
|  |     {									\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ | ||||||
|  |       profilerDebugPrint;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | #define profilerFree(bytes)						\ | ||||||
|  |   if (MemoryProfiler::stats)						\ | ||||||
|  |     {									\ | ||||||
|  |       auto s = MemoryProfiler::stats;					\ | ||||||
|  |       s->totalFreed         += (bytes);					\ | ||||||
|  |       s->currentlyAllocated -= (bytes);					\ | ||||||
|  |     }									\ | ||||||
|  |   if (MemoryProfiler::debug)						\ | ||||||
|  |     {									\ | ||||||
|  |       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ | ||||||
|  |       profilerDebugPrint;						\ | ||||||
|  |     } | ||||||
|  |  | ||||||
|  | void check_huge_pages(void *Buf,uint64_t BYTES); | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| @@ -30,16 +30,15 @@ | |||||||
| #ifndef GRID_CARTESIAN_BASE_H | #ifndef GRID_CARTESIAN_BASE_H | ||||||
| #define GRID_CARTESIAN_BASE_H | #define GRID_CARTESIAN_BASE_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
| namespace Grid{ |  | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////// | ||||||
| // Commicator provides information on the processor grid | // Commicator provides information on the processor grid | ||||||
| ////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////// | ||||||
| //    unsigned long _ndimension; | //    unsigned long _ndimension; | ||||||
|   //    std::vector<int> _processors; // processor grid | //    Coordinate _processors; // processor grid | ||||||
| //    int              _processor;  // linear processor rank | //    int              _processor;  // linear processor rank | ||||||
|   //    std::vector<int> _processor_coor;  // linear processor rank | //    Coordinate _processor_coor;  // linear processor rank | ||||||
| ////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////// | ||||||
| class GridBase : public CartesianCommunicator , public GridThread { | class GridBase : public CartesianCommunicator , public GridThread { | ||||||
|  |  | ||||||
| @@ -48,38 +47,41 @@ public: | |||||||
|   // Give Lattice access |   // Give Lattice access | ||||||
|   template<class object> friend class Lattice; |   template<class object> friend class Lattice; | ||||||
|  |  | ||||||
|     GridBase(const std::vector<int> & processor_grid) : CartesianCommunicator(processor_grid) {}; |   GridBase(const Coordinate & processor_grid) : CartesianCommunicator(processor_grid) { LocallyPeriodic=0;};  | ||||||
|     GridBase(const std::vector<int> & processor_grid, |  | ||||||
|  |   GridBase(const Coordinate & processor_grid, | ||||||
| 	   const CartesianCommunicator &parent, | 	   const CartesianCommunicator &parent, | ||||||
| 	   int &split_rank)  | 	   int &split_rank)  | ||||||
|       : CartesianCommunicator(processor_grid,parent,split_rank) {}; |     : CartesianCommunicator(processor_grid,parent,split_rank) {LocallyPeriodic=0;}; | ||||||
|     GridBase(const std::vector<int> & processor_grid, |  | ||||||
|  |   GridBase(const Coordinate & processor_grid, | ||||||
| 	   const CartesianCommunicator &parent)  | 	   const CartesianCommunicator &parent)  | ||||||
|       : CartesianCommunicator(processor_grid,parent,dummy) {}; |     : CartesianCommunicator(processor_grid,parent,dummy) {LocallyPeriodic=0;}; | ||||||
|  |  | ||||||
|   virtual ~GridBase() = default; |   virtual ~GridBase() = default; | ||||||
|  |  | ||||||
|  |  | ||||||
|   // Physics Grid information. |   // Physics Grid information. | ||||||
|     std::vector<int> _simd_layout;// Which dimensions get relayed out over simd lanes. |   Coordinate _simd_layout;// Which dimensions get relayed out over simd lanes. | ||||||
|     std::vector<int> _fdimensions;// (full) Global dimensions of array prior to cb removal |   Coordinate _fdimensions;// (full) Global dimensions of array prior to cb removal | ||||||
|     std::vector<int> _gdimensions;// Global dimensions of array after cb removal |   Coordinate _gdimensions;// Global dimensions of array after cb removal | ||||||
|     std::vector<int> _ldimensions;// local dimensions of array with processor images removed |   Coordinate _ldimensions;// local dimensions of array with processor images removed | ||||||
|     std::vector<int> _rdimensions;// Reduced local dimensions with simd lane images and processor images removed  |   Coordinate _rdimensions;// Reduced local dimensions with simd lane images and processor images removed  | ||||||
|     std::vector<int> _ostride;    // Outer stride for each dimension |   Coordinate _ostride;    // Outer stride for each dimension | ||||||
|     std::vector<int> _istride;    // Inner stride i.e. within simd lane |   Coordinate _istride;    // Inner stride i.e. within simd lane | ||||||
|   int _osites;                  // _isites*_osites = product(dimensions). |   int _osites;                  // _isites*_osites = product(dimensions). | ||||||
|   int _isites; |   int _isites; | ||||||
|   int _fsites;                  // _isites*_osites = product(dimensions). |   int _fsites;                  // _isites*_osites = product(dimensions). | ||||||
|   int _gsites; |   int _gsites; | ||||||
|     std::vector<int> _slice_block;// subslice information |   Coordinate _slice_block;// subslice information | ||||||
|     std::vector<int> _slice_stride; |   Coordinate _slice_stride; | ||||||
|     std::vector<int> _slice_nblock; |   Coordinate _slice_nblock; | ||||||
|  |  | ||||||
|     std::vector<int> _lstart;     // local start of array in gcoors _processor_coor[d]*_ldimensions[d] |   Coordinate _lstart;     // local start of array in gcoors _processor_coor[d]*_ldimensions[d] | ||||||
|     std::vector<int> _lend  ;     // local end of array in gcoors   _processor_coor[d]*_ldimensions[d]+_ldimensions_[d]-1 |   Coordinate _lend  ;     // local end of array in gcoors   _processor_coor[d]*_ldimensions[d]+_ldimensions_[d]-1 | ||||||
|  |  | ||||||
|   bool _isCheckerBoarded;  |   bool _isCheckerBoarded;  | ||||||
|  |   int        LocallyPeriodic; | ||||||
|  |   Coordinate _checker_dim_mask; | ||||||
|  |  | ||||||
| public: | public: | ||||||
|  |  | ||||||
| @@ -88,7 +90,7 @@ public: | |||||||
|   // GridCartesian / GridRedBlackCartesian |   // GridCartesian / GridRedBlackCartesian | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   virtual int CheckerBoarded(int dim)=0; |   virtual int CheckerBoarded(int dim)=0; | ||||||
|     virtual int CheckerBoard(const std::vector<int> &site)=0; |   virtual int CheckerBoard(const Coordinate &site)=0; | ||||||
|   virtual int CheckerBoardDestination(int source_cb,int shift,int dim)=0; |   virtual int CheckerBoardDestination(int source_cb,int shift,int dim)=0; | ||||||
|   virtual int CheckerBoardShift(int source_cb,int dim,int shift,int osite)=0; |   virtual int CheckerBoardShift(int source_cb,int dim,int shift,int osite)=0; | ||||||
|   virtual int CheckerBoardShiftForCB(int source_cb,int dim,int shift,int cb)=0; |   virtual int CheckerBoardShiftForCB(int source_cb,int dim,int shift,int cb)=0; | ||||||
| @@ -107,20 +109,20 @@ public: | |||||||
|   // coordinate. Note, however, for data parallel operations the "inner" indexing cost is not paid and all |   // coordinate. Note, however, for data parallel operations the "inner" indexing cost is not paid and all | ||||||
|   // lanes are operated upon simultaneously. |   // lanes are operated upon simultaneously. | ||||||
|    |    | ||||||
|     virtual int oIndex(std::vector<int> &coor) |   virtual int oIndex(Coordinate &coor) | ||||||
|   { |   { | ||||||
|     int idx=0; |     int idx=0; | ||||||
|     // Works with either global or local coordinates |     // Works with either global or local coordinates | ||||||
|     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*(coor[d]%_rdimensions[d]); |     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*(coor[d]%_rdimensions[d]); | ||||||
|     return idx; |     return idx; | ||||||
|   } |   } | ||||||
|     virtual int iIndex(std::vector<int> &lcoor) |   virtual int iIndex(Coordinate &lcoor) | ||||||
|   { |   { | ||||||
|     int idx=0; |     int idx=0; | ||||||
|     for(int d=0;d<_ndimension;d++) idx+=_istride[d]*(lcoor[d]/_rdimensions[d]); |     for(int d=0;d<_ndimension;d++) idx+=_istride[d]*(lcoor[d]/_rdimensions[d]); | ||||||
|     return idx; |     return idx; | ||||||
|   } |   } | ||||||
|     inline int oIndexReduced(std::vector<int> &ocoor) |   inline int oIndexReduced(Coordinate &ocoor) | ||||||
|   { |   { | ||||||
|     int idx=0;  |     int idx=0;  | ||||||
|     // ocoor is already reduced so can eliminate the modulo operation |     // ocoor is already reduced so can eliminate the modulo operation | ||||||
| @@ -128,11 +130,11 @@ public: | |||||||
|     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*ocoor[d]; |     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*ocoor[d]; | ||||||
|     return idx; |     return idx; | ||||||
|   } |   } | ||||||
|     inline void oCoorFromOindex (std::vector<int>& coor,int Oindex){ |   inline void oCoorFromOindex (Coordinate& coor,int Oindex){ | ||||||
|     Lexicographic::CoorFromIndex(coor,Oindex,_rdimensions); |     Lexicographic::CoorFromIndex(coor,Oindex,_rdimensions); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|     inline void InOutCoorToLocalCoor (std::vector<int> &ocoor, std::vector<int> &icoor, std::vector<int> &lcoor) { |   inline void InOutCoorToLocalCoor (Coordinate &ocoor, Coordinate &icoor, Coordinate &lcoor) { | ||||||
|     lcoor.resize(_ndimension); |     lcoor.resize(_ndimension); | ||||||
|     for (int d = 0; d < _ndimension; d++) |     for (int d = 0; d < _ndimension; d++) | ||||||
|       lcoor[d] = ocoor[d] + _rdimensions[d] * icoor[d]; |       lcoor[d] = ocoor[d] + _rdimensions[d] * icoor[d]; | ||||||
| @@ -141,7 +143,7 @@ public: | |||||||
|   ////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////// | ||||||
|   // SIMD lane addressing |   // SIMD lane addressing | ||||||
|   ////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////// | ||||||
|     inline void iCoorFromIindex(std::vector<int> &coor,int lane) |   inline void iCoorFromIindex(Coordinate &coor,int lane) | ||||||
|   { |   { | ||||||
|     Lexicographic::CoorFromIndex(coor,lane,_simd_layout); |     Lexicographic::CoorFromIndex(coor,lane,_simd_layout); | ||||||
|   } |   } | ||||||
| @@ -152,8 +154,6 @@ public: | |||||||
|   inline int PermuteType(int dimension){ |   inline int PermuteType(int dimension){ | ||||||
|     int permute_type=0; |     int permute_type=0; | ||||||
|     // |     // | ||||||
|       // FIXME: |  | ||||||
|       // |  | ||||||
|     // Best way to encode this would be to present a mask  |     // Best way to encode this would be to present a mask  | ||||||
|     // for which simd dimensions are rotated, and the rotation |     // for which simd dimensions are rotated, and the rotation | ||||||
|     // size. If there is only one simd dimension rotated, this is just  |     // size. If there is only one simd dimension rotated, this is just  | ||||||
| @@ -186,11 +186,11 @@ public: | |||||||
|   inline int gSites(void) const { return _isites*_osites*_Nprocessors; };  |   inline int gSites(void) const { return _isites*_osites*_Nprocessors; };  | ||||||
|   inline int Nd    (void) const { return _ndimension;}; |   inline int Nd    (void) const { return _ndimension;}; | ||||||
|  |  | ||||||
|     inline const std::vector<int> LocalStarts(void)             { return _lstart;    }; |   inline const Coordinate LocalStarts(void)             { return _lstart;    }; | ||||||
|     inline const std::vector<int> &FullDimensions(void)         { return _fdimensions;}; |   inline const Coordinate &FullDimensions(void)         { return _fdimensions;}; | ||||||
|     inline const std::vector<int> &GlobalDimensions(void)       { return _gdimensions;}; |   inline const Coordinate &GlobalDimensions(void)       { return _gdimensions;}; | ||||||
|     inline const std::vector<int> &LocalDimensions(void)        { return _ldimensions;}; |   inline const Coordinate &LocalDimensions(void)        { return _ldimensions;}; | ||||||
|     inline const std::vector<int> &VirtualLocalDimensions(void) { return _ldimensions;}; |   inline const Coordinate &VirtualLocalDimensions(void) { return _ldimensions;}; | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Utility to print the full decomposition details  |   // Utility to print the full decomposition details  | ||||||
| @@ -214,15 +214,15 @@ public: | |||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Global addressing |   // Global addressing | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|     void GlobalIndexToGlobalCoor(int gidx,std::vector<int> &gcoor){ |   void GlobalIndexToGlobalCoor(int gidx,Coordinate &gcoor){ | ||||||
|     assert(gidx< gSites()); |     assert(gidx< gSites()); | ||||||
|     Lexicographic::CoorFromIndex(gcoor,gidx,_gdimensions); |     Lexicographic::CoorFromIndex(gcoor,gidx,_gdimensions); | ||||||
|   } |   } | ||||||
|     void LocalIndexToLocalCoor(int lidx,std::vector<int> &lcoor){ |   void LocalIndexToLocalCoor(int lidx,Coordinate &lcoor){ | ||||||
|     assert(lidx<lSites()); |     assert(lidx<lSites()); | ||||||
|     Lexicographic::CoorFromIndex(lcoor,lidx,_ldimensions); |     Lexicographic::CoorFromIndex(lcoor,lidx,_ldimensions); | ||||||
|   } |   } | ||||||
|     void GlobalCoorToGlobalIndex(const std::vector<int> & gcoor,int & gidx){ |   void GlobalCoorToGlobalIndex(const Coordinate & gcoor,int & gidx){ | ||||||
|     gidx=0; |     gidx=0; | ||||||
|     int mult=1; |     int mult=1; | ||||||
|     for(int mu=0;mu<_ndimension;mu++) { |     for(int mu=0;mu<_ndimension;mu++) { | ||||||
| @@ -230,7 +230,7 @@ public: | |||||||
|       mult*=_gdimensions[mu]; |       mult*=_gdimensions[mu]; | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|     void GlobalCoorToProcessorCoorLocalCoor(std::vector<int> &pcoor,std::vector<int> &lcoor,const std::vector<int> &gcoor) |   void GlobalCoorToProcessorCoorLocalCoor(Coordinate &pcoor,Coordinate &lcoor,const Coordinate &gcoor) | ||||||
|   { |   { | ||||||
|     pcoor.resize(_ndimension); |     pcoor.resize(_ndimension); | ||||||
|     lcoor.resize(_ndimension); |     lcoor.resize(_ndimension); | ||||||
| @@ -240,14 +240,14 @@ public: | |||||||
|       lcoor[mu] = gcoor[mu]%_fld; |       lcoor[mu] = gcoor[mu]%_fld; | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|     void GlobalCoorToRankIndex(int &rank, int &o_idx, int &i_idx ,const std::vector<int> &gcoor) |   void GlobalCoorToRankIndex(int &rank, int &o_idx, int &i_idx ,const Coordinate &gcoor) | ||||||
|   { |   { | ||||||
|       std::vector<int> pcoor; |     Coordinate pcoor; | ||||||
|       std::vector<int> lcoor; |     Coordinate lcoor; | ||||||
|     GlobalCoorToProcessorCoorLocalCoor(pcoor,lcoor,gcoor); |     GlobalCoorToProcessorCoorLocalCoor(pcoor,lcoor,gcoor); | ||||||
|     rank = RankFromProcessorCoor(pcoor); |     rank = RankFromProcessorCoor(pcoor); | ||||||
|     /* |     /* | ||||||
|       std::vector<int> cblcoor(lcoor); |       Coordinate cblcoor(lcoor); | ||||||
|       for(int d=0;d<cblcoor.size();d++){ |       for(int d=0;d<cblcoor.size();d++){ | ||||||
|       if( this->CheckerBoarded(d) ) { |       if( this->CheckerBoarded(d) ) { | ||||||
|       cblcoor[d] = lcoor[d]/2; |       cblcoor[d] = lcoor[d]/2; | ||||||
| @@ -258,10 +258,10 @@ public: | |||||||
|     o_idx= oIndex(lcoor); |     o_idx= oIndex(lcoor); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|     void RankIndexToGlobalCoor(int rank, int o_idx, int i_idx , std::vector<int> &gcoor) |   void RankIndexToGlobalCoor(int rank, int o_idx, int i_idx , Coordinate &gcoor) | ||||||
|   { |   { | ||||||
|     gcoor.resize(_ndimension); |     gcoor.resize(_ndimension); | ||||||
|       std::vector<int> coor(_ndimension); |     Coordinate coor(_ndimension); | ||||||
|  |  | ||||||
|     ProcessorCoorFromRank(rank,coor); |     ProcessorCoorFromRank(rank,coor); | ||||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = _ldimensions[mu]*coor[mu]; |     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = _ldimensions[mu]*coor[mu]; | ||||||
| @@ -273,20 +273,19 @@ public: | |||||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] += coor[mu]; |     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] += coor[mu]; | ||||||
|        |        | ||||||
|   } |   } | ||||||
|     void RankIndexCbToFullGlobalCoor(int rank, int o_idx, int i_idx, int cb,std::vector<int> &fcoor) |   void RankIndexCbToFullGlobalCoor(int rank, int o_idx, int i_idx, int cb,Coordinate &fcoor) | ||||||
|   { |   { | ||||||
|     RankIndexToGlobalCoor(rank,o_idx,i_idx ,fcoor); |     RankIndexToGlobalCoor(rank,o_idx,i_idx ,fcoor); | ||||||
|     if(CheckerBoarded(0)){ |     if(CheckerBoarded(0)){ | ||||||
|       fcoor[0] = fcoor[0]*2+cb; |       fcoor[0] = fcoor[0]*2+cb; | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|     void ProcessorCoorLocalCoorToGlobalCoor(std::vector<int> &Pcoor,std::vector<int> &Lcoor,std::vector<int> &gcoor) |   void ProcessorCoorLocalCoorToGlobalCoor(Coordinate &Pcoor,Coordinate &Lcoor,Coordinate &gcoor) | ||||||
|   { |   { | ||||||
|     gcoor.resize(_ndimension); |     gcoor.resize(_ndimension); | ||||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = Pcoor[mu]*_ldimensions[mu]+Lcoor[mu]; |     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = Pcoor[mu]*_ldimensions[mu]+Lcoor[mu]; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| } |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -28,17 +28,17 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_CARTESIAN_FULL_H | #ifndef GRID_CARTESIAN_FULL_H | ||||||
| #define GRID_CARTESIAN_FULL_H | #define GRID_CARTESIAN_FULL_H | ||||||
|  |  | ||||||
| namespace Grid{ | NAMESPACE_BEGIN(Grid); | ||||||
|      |      | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Grid Support. | // Grid Support. | ||||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  |  | ||||||
| class GridCartesian: public GridBase { | class GridCartesian: public GridBase { | ||||||
|  |  | ||||||
| public: | public: | ||||||
|   int dummy; |   int dummy; | ||||||
|  |   Coordinate _checker_dim_mask; | ||||||
|   virtual int  CheckerBoardFromOindexTable (int Oindex) { |   virtual int  CheckerBoardFromOindexTable (int Oindex) { | ||||||
|     return 0; |     return 0; | ||||||
|   } |   } | ||||||
| @@ -49,7 +49,7 @@ public: | |||||||
|   virtual int CheckerBoarded(int dim){ |   virtual int CheckerBoarded(int dim){ | ||||||
|     return 0; |     return 0; | ||||||
|   } |   } | ||||||
|     virtual int CheckerBoard(const std::vector<int> &site){ |   virtual int CheckerBoard(const Coordinate &site){ | ||||||
|     return 0; |     return 0; | ||||||
|   } |   } | ||||||
|   virtual int CheckerBoardDestination(int cb,int shift,int dim){ |   virtual int CheckerBoardDestination(int cb,int shift,int dim){ | ||||||
| @@ -64,16 +64,16 @@ public: | |||||||
|   ///////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////// | ||||||
|   // Constructor takes a parent grid and possibly subdivides communicator. |   // Constructor takes a parent grid and possibly subdivides communicator. | ||||||
|   ///////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////// | ||||||
|     GridCartesian(const std::vector<int> &dimensions, |   GridCartesian(const Coordinate &dimensions, | ||||||
| 		  const std::vector<int> &simd_layout, | 		const Coordinate &simd_layout, | ||||||
| 		  const std::vector<int> &processor_grid, | 		const Coordinate &processor_grid, | ||||||
| 		const GridCartesian &parent) : GridBase(processor_grid,parent,dummy) | 		const GridCartesian &parent) : GridBase(processor_grid,parent,dummy) | ||||||
|   { |   { | ||||||
|     Init(dimensions,simd_layout,processor_grid); |     Init(dimensions,simd_layout,processor_grid); | ||||||
|   } |   } | ||||||
|     GridCartesian(const std::vector<int> &dimensions, |   GridCartesian(const Coordinate &dimensions, | ||||||
| 		  const std::vector<int> &simd_layout, | 		const Coordinate &simd_layout, | ||||||
| 		  const std::vector<int> &processor_grid, | 		const Coordinate &processor_grid, | ||||||
| 		const GridCartesian &parent,int &split_rank) : GridBase(processor_grid,parent,split_rank) | 		const GridCartesian &parent,int &split_rank) : GridBase(processor_grid,parent,split_rank) | ||||||
|   { |   { | ||||||
|     Init(dimensions,simd_layout,processor_grid); |     Init(dimensions,simd_layout,processor_grid); | ||||||
| @@ -81,18 +81,18 @@ public: | |||||||
|   ///////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////// | ||||||
|   // Construct from comm world |   // Construct from comm world | ||||||
|   ///////////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////////// | ||||||
|     GridCartesian(const std::vector<int> &dimensions, |   GridCartesian(const Coordinate &dimensions, | ||||||
| 		  const std::vector<int> &simd_layout, | 		const Coordinate &simd_layout, | ||||||
| 		  const std::vector<int> &processor_grid) : GridBase(processor_grid) | 		const Coordinate &processor_grid) : GridBase(processor_grid) | ||||||
|   { |   { | ||||||
|     Init(dimensions,simd_layout,processor_grid); |     Init(dimensions,simd_layout,processor_grid); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   virtual ~GridCartesian() = default; |   virtual ~GridCartesian() = default; | ||||||
|  |  | ||||||
|     void Init(const std::vector<int> &dimensions, |   void Init(const Coordinate &dimensions, | ||||||
| 	      const std::vector<int> &simd_layout, | 	    const Coordinate &simd_layout, | ||||||
| 	      const std::vector<int> &processor_grid) | 	    const Coordinate &processor_grid) | ||||||
|   { |   { | ||||||
|     /////////////////////// |     /////////////////////// | ||||||
|     // Grid information |     // Grid information | ||||||
| @@ -105,6 +105,7 @@ public: | |||||||
|     _ldimensions.resize(_ndimension); |     _ldimensions.resize(_ndimension); | ||||||
|     _rdimensions.resize(_ndimension); |     _rdimensions.resize(_ndimension); | ||||||
|     _simd_layout.resize(_ndimension); |     _simd_layout.resize(_ndimension); | ||||||
|  |     _checker_dim_mask.resize(_ndimension);; | ||||||
|     _lstart.resize(_ndimension); |     _lstart.resize(_ndimension); | ||||||
|     _lend.resize(_ndimension); |     _lend.resize(_ndimension); | ||||||
|  |  | ||||||
| @@ -115,6 +116,8 @@ public: | |||||||
|  |  | ||||||
|     for (int d = 0; d < _ndimension; d++) |     for (int d = 0; d < _ndimension; d++) | ||||||
|       { |       { | ||||||
|  | 	_checker_dim_mask[d]=0; | ||||||
|  |  | ||||||
|         _fdimensions[d] = dimensions[d];   // Global dimensions |         _fdimensions[d] = dimensions[d];   // Global dimensions | ||||||
|         _gdimensions[d] = _fdimensions[d]; // Global dimensions |         _gdimensions[d] = _fdimensions[d]; // Global dimensions | ||||||
|         _simd_layout[d] = simd_layout[d]; |         _simd_layout[d] = simd_layout[d]; | ||||||
| @@ -170,5 +173,6 @@ public: | |||||||
|   }; |   }; | ||||||
|  |  | ||||||
| }; | }; | ||||||
| } |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -29,19 +29,34 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_CARTESIAN_RED_BLACK_H | #ifndef GRID_CARTESIAN_RED_BLACK_H | ||||||
| #define GRID_CARTESIAN_RED_BLACK_H | #define GRID_CARTESIAN_RED_BLACK_H | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
| namespace Grid { |  | ||||||
|  |  | ||||||
| static const int CbRed  =0; | static const int CbRed  =0; | ||||||
| static const int CbBlack=1; | static const int CbBlack=1; | ||||||
| static const int Even   =CbRed; | static const int Even   =CbRed; | ||||||
| static const int Odd    =CbBlack; | static const int Odd    =CbBlack; | ||||||
|  |  | ||||||
|  | accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex, Coordinate &rdim, Coordinate &chk_dim_msk) | ||||||
|  | { | ||||||
|  |   int nd=rdim.size(); | ||||||
|  |   Coordinate coor(nd); | ||||||
|  |  | ||||||
|  |   Lexicographic::CoorFromIndex(coor,oindex,rdim); | ||||||
|  |  | ||||||
|  |   int linear=0; | ||||||
|  |   for(int d=0;d<nd;d++){ | ||||||
|  |     if(chk_dim_msk[d]) | ||||||
|  |       linear=linear+coor[d]; | ||||||
|  |   } | ||||||
|  |   return (linear&0x1); | ||||||
|  | } | ||||||
|  |  | ||||||
|  |      | ||||||
| // Specialise this for red black grids storing half the data like a chess board. | // Specialise this for red black grids storing half the data like a chess board. | ||||||
| class GridRedBlackCartesian : public GridBase | class GridRedBlackCartesian : public GridBase | ||||||
| { | { | ||||||
| public: | public: | ||||||
|     std::vector<int> _checker_dim_mask; |   //  Coordinate _checker_dim_mask; | ||||||
|   int              _checker_dim; |   int              _checker_dim; | ||||||
|   std::vector<int> _checker_board; |   std::vector<int> _checker_board; | ||||||
|  |  | ||||||
| @@ -49,7 +64,7 @@ public: | |||||||
|     if( dim==_checker_dim) return 1; |     if( dim==_checker_dim) return 1; | ||||||
|     else return 0; |     else return 0; | ||||||
|   } |   } | ||||||
|     virtual int CheckerBoard(const std::vector<int> &site){ |   virtual int CheckerBoard(const Coordinate &site){ | ||||||
|     int linear=0; |     int linear=0; | ||||||
|     assert(site.size()==_ndimension); |     assert(site.size()==_ndimension); | ||||||
|     for(int d=0;d<_ndimension;d++){  |     for(int d=0;d<_ndimension;d++){  | ||||||
| @@ -59,7 +74,6 @@ public: | |||||||
|     return (linear&0x1); |     return (linear&0x1); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  |  | ||||||
|   // Depending on the cb of site, we toggle source cb. |   // Depending on the cb of site, we toggle source cb. | ||||||
|   // for block #b, element #e = (b, e) |   // for block #b, element #e = (b, e) | ||||||
|   // we need  |   // we need  | ||||||
| @@ -83,7 +97,7 @@ public: | |||||||
|   } |   } | ||||||
|   virtual int  CheckerBoardFromOindex (int Oindex) |   virtual int  CheckerBoardFromOindex (int Oindex) | ||||||
|   { |   { | ||||||
|       std::vector<int> ocoor; |     Coordinate ocoor; | ||||||
|     oCoorFromOindex(ocoor,Oindex); |     oCoorFromOindex(ocoor,Oindex); | ||||||
|     return CheckerBoard(ocoor); |     return CheckerBoard(ocoor); | ||||||
|   } |   } | ||||||
| @@ -118,7 +132,7 @@ public: | |||||||
|   GridRedBlackCartesian(const GridBase *base) : GridBase(base->_processors,*base) |   GridRedBlackCartesian(const GridBase *base) : GridBase(base->_processors,*base) | ||||||
|   { |   { | ||||||
|     int dims = base->_ndimension; |     int dims = base->_ndimension; | ||||||
|       std::vector<int> checker_dim_mask(dims,1); |     Coordinate checker_dim_mask(dims,1); | ||||||
|     int checker_dim = 0; |     int checker_dim = 0; | ||||||
|     Init(base->_fdimensions,base->_simd_layout,base->_processors,checker_dim_mask,checker_dim); |     Init(base->_fdimensions,base->_simd_layout,base->_processors,checker_dim_mask,checker_dim); | ||||||
|   }; |   }; | ||||||
| @@ -127,7 +141,7 @@ public: | |||||||
|   // Create redblack from original grid, with non-trivial checker dim mask |   // Create redblack from original grid, with non-trivial checker dim mask | ||||||
|   //////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////// | ||||||
|   GridRedBlackCartesian(const GridBase *base, |   GridRedBlackCartesian(const GridBase *base, | ||||||
| 			  const std::vector<int> &checker_dim_mask, | 			const Coordinate &checker_dim_mask, | ||||||
| 			int checker_dim | 			int checker_dim | ||||||
| 			) :  GridBase(base->_processors,*base)  | 			) :  GridBase(base->_processors,*base)  | ||||||
|   { |   { | ||||||
| @@ -135,40 +149,11 @@ public: | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   virtual ~GridRedBlackCartesian() = default; |   virtual ~GridRedBlackCartesian() = default; | ||||||
| #if 0 |  | ||||||
|     //////////////////////////////////////////////////////////// |  | ||||||
|     // Create redblack grid ;; deprecate these. Should not |  | ||||||
|     // need direct creation of redblack without a full grid to base on |  | ||||||
|     //////////////////////////////////////////////////////////// |  | ||||||
|     GridRedBlackCartesian(const GridBase *base, |  | ||||||
| 			  const std::vector<int> &dimensions, |  | ||||||
| 			  const std::vector<int> &simd_layout, |  | ||||||
| 			  const std::vector<int> &processor_grid, |  | ||||||
| 			  const std::vector<int> &checker_dim_mask, |  | ||||||
| 			  int checker_dim |  | ||||||
| 			  ) :  GridBase(processor_grid,*base)  |  | ||||||
|     { |  | ||||||
|       Init(dimensions,simd_layout,processor_grid,checker_dim_mask,checker_dim); |  | ||||||
|     } |  | ||||||
|  |  | ||||||
|     //////////////////////////////////////////////////////////// |   void Init(const Coordinate &dimensions, | ||||||
|     // Create redblack grid | 	    const Coordinate &simd_layout, | ||||||
|     //////////////////////////////////////////////////////////// | 	    const Coordinate &processor_grid, | ||||||
|     GridRedBlackCartesian(const GridBase *base, | 	    const Coordinate &checker_dim_mask, | ||||||
| 			  const std::vector<int> &dimensions, |  | ||||||
| 			  const std::vector<int> &simd_layout, |  | ||||||
| 			  const std::vector<int> &processor_grid) : GridBase(processor_grid,*base)  |  | ||||||
|     { |  | ||||||
|       std::vector<int> checker_dim_mask(dimensions.size(),1); |  | ||||||
|       int checker_dim = 0; |  | ||||||
|       Init(dimensions,simd_layout,processor_grid,checker_dim_mask,checker_dim); |  | ||||||
|     } |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
|     void Init(const std::vector<int> &dimensions, |  | ||||||
|               const std::vector<int> &simd_layout, |  | ||||||
|               const std::vector<int> &processor_grid, |  | ||||||
|               const std::vector<int> &checker_dim_mask, |  | ||||||
| 	    int checker_dim) | 	    int checker_dim) | ||||||
|   { |   { | ||||||
|  |  | ||||||
| @@ -282,7 +267,7 @@ public: | |||||||
|   }; |   }; | ||||||
|  |  | ||||||
| protected: | protected: | ||||||
|     virtual int oIndex(std::vector<int> &coor) |   virtual int oIndex(Coordinate &coor) | ||||||
|   { |   { | ||||||
|     int idx = 0; |     int idx = 0; | ||||||
|     for (int d = 0; d < _ndimension; d++) |     for (int d = 0; d < _ndimension; d++) | ||||||
| @@ -299,7 +284,7 @@ public: | |||||||
|     return idx; |     return idx; | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
|     virtual int iIndex(std::vector<int> &lcoor) |   virtual int iIndex(Coordinate &lcoor) | ||||||
|   { |   { | ||||||
|     int idx = 0; |     int idx = 0; | ||||||
|     for (int d = 0; d < _ndimension; d++) |     for (int d = 0; d < _ndimension; d++) | ||||||
| @@ -316,5 +301,5 @@ public: | |||||||
|     return idx; |     return idx; | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -28,6 +28,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_COMMUNICATOR_H | #ifndef GRID_COMMUNICATOR_H | ||||||
| #define GRID_COMMUNICATOR_H | #define GRID_COMMUNICATOR_H | ||||||
|  |  | ||||||
|  | #include <Grid/util/Coordinate.h> | ||||||
| #include <Grid/communicator/SharedMemory.h> | #include <Grid/communicator/SharedMemory.h> | ||||||
| #include <Grid/communicator/Communicator_base.h> | #include <Grid/communicator/Communicator_base.h> | ||||||
|  |  | ||||||
|   | |||||||
| @@ -31,7 +31,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <limits.h> | #include <limits.h> | ||||||
| #include <sys/mman.h> | #include <sys/mman.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////// | ||||||
| // Info that is setup once and indept of cartesian layout | // Info that is setup once and indept of cartesian layout | ||||||
| @@ -47,8 +47,8 @@ int                      CartesianCommunicator::Dimensions(void)        { return | |||||||
| int                      CartesianCommunicator::IsBoss(void)            { return _processor==0; }; | int                      CartesianCommunicator::IsBoss(void)            { return _processor==0; }; | ||||||
| int                      CartesianCommunicator::BossRank(void)          { return 0; }; | int                      CartesianCommunicator::BossRank(void)          { return 0; }; | ||||||
| int                      CartesianCommunicator::ThisRank(void)          { return _processor; }; | int                      CartesianCommunicator::ThisRank(void)          { return _processor; }; | ||||||
| const std::vector<int> & CartesianCommunicator::ThisProcessorCoor(void) { return _processor_coor; }; | const Coordinate & CartesianCommunicator::ThisProcessorCoor(void) { return _processor_coor; }; | ||||||
| const std::vector<int> & CartesianCommunicator::ProcessorGrid(void)     { return _processors; }; | const Coordinate & CartesianCommunicator::ProcessorGrid(void)     { return _processors; }; | ||||||
| int                      CartesianCommunicator::ProcessorCount(void)    { return _Nprocessors; }; | int                      CartesianCommunicator::ProcessorCount(void)    { return _Nprocessors; }; | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -72,5 +72,6 @@ void CartesianCommunicator::GlobalSumVector(ComplexD *c,int N) | |||||||
|   GlobalSumVector((double *)c,2*N); |   GlobalSumVector((double *)c,2*N); | ||||||
| } | } | ||||||
|    |    | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -34,7 +34,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| /////////////////////////////////// | /////////////////////////////////// | ||||||
| #include <Grid/communicator/SharedMemory.h> | #include <Grid/communicator/SharedMemory.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| class CartesianCommunicator : public SharedMemory { | class CartesianCommunicator : public SharedMemory { | ||||||
|  |  | ||||||
| @@ -52,9 +52,9 @@ public: | |||||||
|   // Communicator should know nothing of the physics grid, only processor grid. |   // Communicator should know nothing of the physics grid, only processor grid. | ||||||
|   //////////////////////////////////////////// |   //////////////////////////////////////////// | ||||||
|   int              _Nprocessors;     // How many in all |   int              _Nprocessors;     // How many in all | ||||||
|   std::vector<int> _processors;      // Which dimensions get relayed out over processors lanes. |   Coordinate _processors;      // Which dimensions get relayed out over processors lanes. | ||||||
|   int              _processor;       // linear processor rank |   int              _processor;       // linear processor rank | ||||||
|   std::vector<int> _processor_coor;  // linear processor coordinate |   Coordinate _processor_coor;  // linear processor coordinate | ||||||
|   unsigned long    _ndimension; |   unsigned long    _ndimension; | ||||||
|   static Grid_MPI_Comm      communicator_world; |   static Grid_MPI_Comm      communicator_world; | ||||||
|   Grid_MPI_Comm             communicator; |   Grid_MPI_Comm             communicator; | ||||||
| @@ -69,8 +69,8 @@ public: | |||||||
|   // Constructors to sub-divide a parent communicator |   // Constructors to sub-divide a parent communicator | ||||||
|   // and default to comm world |   // and default to comm world | ||||||
|   //////////////////////////////////////////////// |   //////////////////////////////////////////////// | ||||||
|   CartesianCommunicator(const std::vector<int> &processors,const CartesianCommunicator &parent,int &srank); |   CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank); | ||||||
|   CartesianCommunicator(const std::vector<int> &pdimensions_in); |   CartesianCommunicator(const Coordinate &pdimensions_in); | ||||||
|   virtual ~CartesianCommunicator(); |   virtual ~CartesianCommunicator(); | ||||||
|  |  | ||||||
| private: | private: | ||||||
| @@ -79,7 +79,7 @@ public: | |||||||
|   // Private initialise from an MPI communicator |   // Private initialise from an MPI communicator | ||||||
|   // Can use after an MPI_Comm_split, but hidden from user so private |   // Can use after an MPI_Comm_split, but hidden from user so private | ||||||
|   //////////////////////////////////////////////// |   //////////////////////////////////////////////// | ||||||
|   void InitFromMPICommunicator(const std::vector<int> &processors, Grid_MPI_Comm communicator_base); |   void InitFromMPICommunicator(const Coordinate &processors, Grid_MPI_Comm communicator_base); | ||||||
|  |  | ||||||
| public: | public: | ||||||
|    |    | ||||||
| @@ -88,15 +88,15 @@ public: | |||||||
|   // Wraps MPI_Cart routines, or implements equivalent on other impls |   // Wraps MPI_Cart routines, or implements equivalent on other impls | ||||||
|   //////////////////////////////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   void ShiftedRanks(int dim,int shift,int & source, int & dest); |   void ShiftedRanks(int dim,int shift,int & source, int & dest); | ||||||
|   int  RankFromProcessorCoor(std::vector<int> &coor); |   int  RankFromProcessorCoor(Coordinate &coor); | ||||||
|   void ProcessorCoorFromRank(int rank,std::vector<int> &coor); |   void ProcessorCoorFromRank(int rank,Coordinate &coor); | ||||||
|    |    | ||||||
|   int                      Dimensions(void)        ; |   int                      Dimensions(void)        ; | ||||||
|   int                      IsBoss(void)            ; |   int                      IsBoss(void)            ; | ||||||
|   int                      BossRank(void)          ; |   int                      BossRank(void)          ; | ||||||
|   int                      ThisRank(void)          ; |   int                      ThisRank(void)          ; | ||||||
|   const std::vector<int> & ThisProcessorCoor(void) ; |   const Coordinate & ThisProcessorCoor(void) ; | ||||||
|   const std::vector<int> & ProcessorGrid(void)     ; |   const Coordinate & ProcessorGrid(void)     ; | ||||||
|   int                      ProcessorCount(void)    ; |   int                      ProcessorCount(void)    ; | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -114,6 +114,7 @@ public: | |||||||
|   void GlobalSumVector(RealD *,int N); |   void GlobalSumVector(RealD *,int N); | ||||||
|   void GlobalSum(uint32_t &); |   void GlobalSum(uint32_t &); | ||||||
|   void GlobalSum(uint64_t &); |   void GlobalSum(uint64_t &); | ||||||
|  |   void GlobalSumVector(uint64_t*,int N); | ||||||
|   void GlobalSum(ComplexF &c); |   void GlobalSum(ComplexF &c); | ||||||
|   void GlobalSumVector(ComplexF *c,int N); |   void GlobalSumVector(ComplexF *c,int N); | ||||||
|   void GlobalSum(ComplexD &c); |   void GlobalSum(ComplexD &c); | ||||||
| @@ -137,21 +138,6 @@ public: | |||||||
| 		      int recv_from_rank, | 		      int recv_from_rank, | ||||||
| 		      int bytes); | 		      int bytes); | ||||||
|    |    | ||||||
|   void SendRecvPacket(void *xmit, |  | ||||||
| 		      void *recv, |  | ||||||
| 		      int xmit_to_rank, |  | ||||||
| 		      int recv_from_rank, |  | ||||||
| 		      int bytes); |  | ||||||
|    |  | ||||||
|   void SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 			   void *xmit, |  | ||||||
| 			   int xmit_to_rank, |  | ||||||
| 			   void *recv, |  | ||||||
| 			   int recv_from_rank, |  | ||||||
| 			   int bytes); |  | ||||||
|    |  | ||||||
|   void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall); |  | ||||||
|  |  | ||||||
|   double StencilSendToRecvFrom(void *xmit, |   double StencilSendToRecvFrom(void *xmit, | ||||||
| 			       int xmit_to_rank, | 			       int xmit_to_rank, | ||||||
| 			       void *recv, | 			       void *recv, | ||||||
| @@ -199,9 +185,10 @@ public: | |||||||
|   template<class obj> void Broadcast(int root,obj &data) |   template<class obj> void Broadcast(int root,obj &data) | ||||||
|   { |   { | ||||||
|     Broadcast(root,(void *)&data,sizeof(data)); |     Broadcast(root,(void *)&data,sizeof(data)); | ||||||
|     }; |  | ||||||
|  |  | ||||||
| };  |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  | };  | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -28,7 +28,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
| #include <Grid/communicator/SharedMemory.h> | #include <Grid/communicator/SharedMemory.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| Grid_MPI_Comm       CartesianCommunicator::communicator_world; | Grid_MPI_Comm       CartesianCommunicator::communicator_world; | ||||||
|  |  | ||||||
| @@ -43,22 +43,35 @@ void CartesianCommunicator::Init(int *argc, char ***argv) | |||||||
|  |  | ||||||
|   MPI_Initialized(&flag); // needed to coexist with other libs apparently |   MPI_Initialized(&flag); // needed to coexist with other libs apparently | ||||||
|   if ( !flag ) { |   if ( !flag ) { | ||||||
|  |  | ||||||
|  | #ifndef GRID_COMMS_THREADS | ||||||
|  |     nCommThreads=1; | ||||||
|  |     // wrong results here too | ||||||
|  |     // For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs | ||||||
|  |     // other comms schemes are ok | ||||||
|  |     MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided); | ||||||
|  | #else | ||||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); |     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); | ||||||
|  | #endif | ||||||
|     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE |     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE | ||||||
|     if( (nCommThreads == 1 && provided == MPI_THREAD_SINGLE) || |     if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) { | ||||||
|         (nCommThreads > 1 && provided != MPI_THREAD_MULTIPLE) ) |  | ||||||
|       assert(0); |       assert(0); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|   Grid_quiesce_nodes(); |     if( (nCommThreads > 1) && (provided != MPI_THREAD_MULTIPLE) ) { | ||||||
|  |       assert(0); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |  | ||||||
|   // Never clean up as done once. |   // Never clean up as done once. | ||||||
|   MPI_Comm_dup (MPI_COMM_WORLD,&communicator_world); |   MPI_Comm_dup (MPI_COMM_WORLD,&communicator_world); | ||||||
|  |  | ||||||
|  |   Grid_quiesce_nodes(); | ||||||
|   GlobalSharedMemory::Init(communicator_world); |   GlobalSharedMemory::Init(communicator_world); | ||||||
|   GlobalSharedMemory::SharedMemoryAllocate( |   GlobalSharedMemory::SharedMemoryAllocate( | ||||||
| 		   GlobalSharedMemory::MAX_MPI_SHM_BYTES, | 		   GlobalSharedMemory::MAX_MPI_SHM_BYTES, | ||||||
| 		   GlobalSharedMemory::Hugepages); | 		   GlobalSharedMemory::Hugepages); | ||||||
|  |   Grid_unquiesce_nodes(); | ||||||
| } | } | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -69,14 +82,14 @@ void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest | |||||||
|   int ierr=MPI_Cart_shift(communicator,dim,shift,&source,&dest); |   int ierr=MPI_Cart_shift(communicator,dim,shift,&source,&dest); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| } | } | ||||||
| int CartesianCommunicator::RankFromProcessorCoor(std::vector<int> &coor) | int CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) | ||||||
| { | { | ||||||
|   int rank; |   int rank; | ||||||
|   int ierr=MPI_Cart_rank  (communicator, &coor[0], &rank); |   int ierr=MPI_Cart_rank  (communicator, &coor[0], &rank); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
|   return rank; |   return rank; | ||||||
| } | } | ||||||
| void  CartesianCommunicator::ProcessorCoorFromRank(int rank, std::vector<int> &coor) | void  CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor) | ||||||
| { | { | ||||||
|   coor.resize(_ndimension); |   coor.resize(_ndimension); | ||||||
|   int ierr=MPI_Cart_coords  (communicator, rank, _ndimension,&coor[0]); |   int ierr=MPI_Cart_coords  (communicator, rank, _ndimension,&coor[0]); | ||||||
| @@ -86,7 +99,7 @@ void  CartesianCommunicator::ProcessorCoorFromRank(int rank, std::vector<int> &c | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Initialises from communicator_world | // Initialises from communicator_world | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors)  | CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||||
| { | { | ||||||
|   MPI_Comm optimal_comm; |   MPI_Comm optimal_comm; | ||||||
|   //////////////////////////////////////////////////// |   //////////////////////////////////////////////////// | ||||||
| @@ -105,13 +118,12 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors) | |||||||
| ////////////////////////////////// | ////////////////////////////////// | ||||||
| // Try to subdivide communicator | // Try to subdivide communicator | ||||||
| ////////////////////////////////// | ////////////////////////////////// | ||||||
| CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors,const CartesianCommunicator &parent,int &srank)     | CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank) | ||||||
| { | { | ||||||
|   _ndimension = processors.size(); |   _ndimension = processors.size();  assert(_ndimension>=1); | ||||||
|  |  | ||||||
|   int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension); |   int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension); | ||||||
|   std::vector<int> parent_processor_coor(_ndimension,0); |   Coordinate parent_processor_coor(_ndimension,0); | ||||||
|   std::vector<int> parent_processors    (_ndimension,1); |   Coordinate parent_processors    (_ndimension,1); | ||||||
|  |  | ||||||
|   // Can make 5d grid from 4d etc... |   // Can make 5d grid from 4d etc... | ||||||
|   int pad = _ndimension-parent_ndimension; |   int pad = _ndimension-parent_ndimension; | ||||||
| @@ -124,10 +136,8 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors, | |||||||
|   // split the communicator |   // split the communicator | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   //  int Nparent = parent._processors ; |   //  int Nparent = parent._processors ; | ||||||
|   //  std::cout << " splitting from communicator "<<parent.communicator <<std::endl; |  | ||||||
|   int Nparent; |   int Nparent; | ||||||
|   MPI_Comm_size(parent.communicator,&Nparent); |   MPI_Comm_size(parent.communicator,&Nparent); | ||||||
|   //  std::cout << " Parent size  "<<Nparent <<std::endl; |  | ||||||
|  |  | ||||||
|   int childsize=1; |   int childsize=1; | ||||||
|   for(int d=0;d<processors.size();d++) { |   for(int d=0;d<processors.size();d++) { | ||||||
| @@ -136,11 +146,9 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors, | |||||||
|   int Nchild = Nparent/childsize; |   int Nchild = Nparent/childsize; | ||||||
|   assert (childsize * Nchild == Nparent); |   assert (childsize * Nchild == Nparent); | ||||||
|  |  | ||||||
|   //  std::cout << " child size  "<<childsize <<std::endl; |   Coordinate ccoor(_ndimension); // coor within subcommunicator | ||||||
|  |   Coordinate scoor(_ndimension); // coor of split within parent | ||||||
|   std::vector<int> ccoor(_ndimension); // coor within subcommunicator |   Coordinate ssize(_ndimension); // coor of split within parent | ||||||
|   std::vector<int> scoor(_ndimension); // coor of split within parent |  | ||||||
|   std::vector<int> ssize(_ndimension); // coor of split within parent |  | ||||||
|  |  | ||||||
|   for(int d=0;d<_ndimension;d++){ |   for(int d=0;d<_ndimension;d++){ | ||||||
|     ccoor[d] = parent_processor_coor[d] % processors[d]; |     ccoor[d] = parent_processor_coor[d] % processors[d]; | ||||||
| @@ -157,36 +165,6 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors, | |||||||
|   MPI_Comm comm_split; |   MPI_Comm comm_split; | ||||||
|   if ( Nchild > 1 ) { |   if ( Nchild > 1 ) { | ||||||
|  |  | ||||||
|     if(0){ |  | ||||||
|       std::cout << GridLogMessage<<"Child communicator of "<< std::hex << parent.communicator << std::dec<<std::endl; |  | ||||||
|       std::cout << GridLogMessage<<" parent grid["<< parent._ndimension<<"]    "; |  | ||||||
|       for(int d=0;d<parent._ndimension;d++)  std::cout << parent._processors[d] << " "; |  | ||||||
|       std::cout<<std::endl; |  | ||||||
|        |  | ||||||
|       std::cout << GridLogMessage<<" child grid["<< _ndimension <<"]    "; |  | ||||||
|       for(int d=0;d<processors.size();d++)  std::cout << processors[d] << " "; |  | ||||||
|       std::cout<<std::endl; |  | ||||||
|        |  | ||||||
|       std::cout << GridLogMessage<<" old rank "<< parent._processor<<" coor ["<< parent._ndimension <<"]    "; |  | ||||||
|       for(int d=0;d<parent._ndimension;d++)  std::cout << parent._processor_coor[d] << " "; |  | ||||||
|       std::cout<<std::endl; |  | ||||||
|        |  | ||||||
|       std::cout << GridLogMessage<<" new split "<< srank<<" scoor ["<< _ndimension <<"]    "; |  | ||||||
|       for(int d=0;d<processors.size();d++)  std::cout << scoor[d] << " "; |  | ||||||
|       std::cout<<std::endl; |  | ||||||
|        |  | ||||||
|       std::cout << GridLogMessage<<" new rank "<< crank<<" coor ["<< _ndimension <<"]    "; |  | ||||||
|       for(int d=0;d<processors.size();d++)  std::cout << ccoor[d] << " "; |  | ||||||
|       std::cout<<std::endl; |  | ||||||
|  |  | ||||||
|       ////////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|       // Declare victory |  | ||||||
|       ////////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|       std::cout << GridLogMessage<<"Divided communicator "<< parent._Nprocessors<<" into " |  | ||||||
| 		<< Nchild <<" communicators with " << childsize << " ranks"<<std::endl; |  | ||||||
|       std::cout << " Split communicator " <<comm_split <<std::endl; |  | ||||||
|     } |  | ||||||
|  |  | ||||||
|     //////////////////////////////////////////////////////////////// |     //////////////////////////////////////////////////////////////// | ||||||
|     // Split the communicator |     // Split the communicator | ||||||
|     //////////////////////////////////////////////////////////////// |     //////////////////////////////////////////////////////////////// | ||||||
| @@ -225,7 +203,7 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors, | |||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| void CartesianCommunicator::InitFromMPICommunicator(const std::vector<int> &processors, MPI_Comm communicator_base) | void CartesianCommunicator::InitFromMPICommunicator(const Coordinate &processors, MPI_Comm communicator_base) | ||||||
| { | { | ||||||
|   //////////////////////////////////////////////////// |   //////////////////////////////////////////////////// | ||||||
|   // Creates communicator, and the communicator_halo |   // Creates communicator, and the communicator_halo | ||||||
| @@ -242,7 +220,7 @@ void CartesianCommunicator::InitFromMPICommunicator(const std::vector<int> &proc | |||||||
|     _Nprocessors*=_processors[i]; |     _Nprocessors*=_processors[i]; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   std::vector<int> periodic(_ndimension,1); |   Coordinate periodic(_ndimension,1); | ||||||
|   MPI_Cart_create(communicator_base, _ndimension,&_processors[0],&periodic[0],0,&communicator); |   MPI_Cart_create(communicator_base, _ndimension,&_processors[0],&periodic[0],0,&communicator); | ||||||
|   MPI_Comm_rank(communicator,&_processor); |   MPI_Comm_rank(communicator,&_processor); | ||||||
|   MPI_Cart_coords(communicator,_processor,_ndimension,&_processor_coor[0]); |   MPI_Cart_coords(communicator,_processor,_ndimension,&_processor_coor[0]); | ||||||
| @@ -285,6 +263,10 @@ void CartesianCommunicator::GlobalSum(uint64_t &u){ | |||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| } | } | ||||||
|  | void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){ | ||||||
|  |   int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator); | ||||||
|  |   assert(ierr==0); | ||||||
|  | } | ||||||
| void CartesianCommunicator::GlobalXOR(uint32_t &u){ | void CartesianCommunicator::GlobalXOR(uint32_t &u){ | ||||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); |   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| @@ -320,60 +302,28 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | |||||||
| 					   int bytes) | 					   int bytes) | ||||||
| { | { | ||||||
|   std::vector<CommsRequest_t> reqs(0); |   std::vector<CommsRequest_t> reqs(0); | ||||||
|   //    unsigned long  xcrc = crc32(0L, Z_NULL, 0); |   unsigned long  xcrc = crc32(0L, Z_NULL, 0); | ||||||
|   //    unsigned long  rcrc = crc32(0L, Z_NULL, 0); |   unsigned long  rcrc = crc32(0L, Z_NULL, 0); | ||||||
|   //    xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); |  | ||||||
|   SendToRecvFromBegin(reqs,xmit,dest,recv,from,bytes); |  | ||||||
|   SendToRecvFromComplete(reqs); |  | ||||||
|   //    rcrc = crc32(rcrc,(unsigned char *)recv,bytes); |  | ||||||
|   //    printf("proc %d SendToRecvFrom %d bytes %lx %lx\n",_processor,bytes,xcrc,rcrc); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, |  | ||||||
| 					   void *recv, |  | ||||||
| 					   int sender, |  | ||||||
| 					   int receiver, |  | ||||||
| 					   int bytes) |  | ||||||
| { |  | ||||||
|   MPI_Status stat; |  | ||||||
|   assert(sender != receiver); |  | ||||||
|   int tag = sender; |  | ||||||
|   if ( _processor == sender ) { |  | ||||||
|     MPI_Send(xmit, bytes, MPI_CHAR,receiver,tag,communicator); |  | ||||||
|   } |  | ||||||
|   if ( _processor == receiver ) {  |  | ||||||
|     MPI_Recv(recv, bytes, MPI_CHAR,sender,tag,communicator,&stat); |  | ||||||
|   } |  | ||||||
| } |  | ||||||
| // Basic Halo comms primitive |  | ||||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 						void *xmit, |  | ||||||
| 						int dest, |  | ||||||
| 						void *recv, |  | ||||||
| 						int from, |  | ||||||
| 						int bytes) |  | ||||||
| { |  | ||||||
|   int myrank = _processor; |   int myrank = _processor; | ||||||
|   int ierr; |   int ierr; | ||||||
|  |  | ||||||
|   if ( CommunicatorPolicy == CommunicatorPolicyConcurrent ) {  |   // Enforce no UVM in comms, device or host OK | ||||||
|     MPI_Request xrq; |   assert(acceleratorIsCommunicable(xmit)); | ||||||
|     MPI_Request rrq; |   assert(acceleratorIsCommunicable(recv)); | ||||||
|  |  | ||||||
|     ierr =MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator,&rrq); |  | ||||||
|     ierr|=MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator,&xrq); |  | ||||||
|      |  | ||||||
|     assert(ierr==0); |  | ||||||
|     list.push_back(xrq); |  | ||||||
|     list.push_back(rrq); |  | ||||||
|   } else {  |  | ||||||
|   // Give the CPU to MPI immediately; can use threads to overlap optionally |   // Give the CPU to MPI immediately; can use threads to overlap optionally | ||||||
|  |   //  printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes); | ||||||
|   ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, |   ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, | ||||||
| 		    recv,bytes,MPI_CHAR,from, from, | 		    recv,bytes,MPI_CHAR,from, from, | ||||||
| 		    communicator,MPI_STATUS_IGNORE); | 		    communicator,MPI_STATUS_IGNORE); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
|   } |  | ||||||
| } |  | ||||||
|  |  | ||||||
|  |   //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); | ||||||
|  |   //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes); | ||||||
|  |   //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush | ||||||
|  | } | ||||||
|  | // Basic Halo comms primitive | ||||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||||
| 						     int dest, | 						     int dest, | ||||||
| 						     void *recv, | 						     void *recv, | ||||||
| @@ -408,16 +358,19 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
|   assert(from != _processor); |   assert(from != _processor); | ||||||
|   assert(gme  == ShmRank); |   assert(gme  == ShmRank); | ||||||
|   double off_node_bytes=0.0; |   double off_node_bytes=0.0; | ||||||
|  |   int tag; | ||||||
|  |  | ||||||
|   if ( gfrom ==MPI_UNDEFINED) { |   if ( gfrom ==MPI_UNDEFINED) { | ||||||
|     ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,from,communicator_halo[commdir],&rrq); |     tag= dir+from*32; | ||||||
|  |     ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq); | ||||||
|     assert(ierr==0); |     assert(ierr==0); | ||||||
|     list.push_back(rrq); |     list.push_back(rrq); | ||||||
|     off_node_bytes+=bytes; |     off_node_bytes+=bytes; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   if ( gdest == MPI_UNDEFINED ) { |   if ( gdest == MPI_UNDEFINED ) { | ||||||
|     ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,_processor,communicator_halo[commdir],&xrq); |     tag= dir+_processor*32; | ||||||
|  |     ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||||
|     assert(ierr==0); |     assert(ierr==0); | ||||||
|     list.push_back(xrq); |     list.push_back(xrq); | ||||||
|     off_node_bytes+=bytes; |     off_node_bytes+=bytes; | ||||||
| @@ -429,15 +382,7 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
|  |  | ||||||
|   return off_node_bytes; |   return off_node_bytes; | ||||||
| } | } | ||||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir) | ||||||
| { |  | ||||||
|   SendToRecvFromComplete(waitall); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::StencilBarrier(void) |  | ||||||
| { |  | ||||||
|   MPI_Barrier  (ShmComm); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) |  | ||||||
| { | { | ||||||
|   int nreq=list.size(); |   int nreq=list.size(); | ||||||
|  |  | ||||||
| @@ -448,6 +393,13 @@ void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> & | |||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
|   list.resize(0); |   list.resize(0); | ||||||
| } | } | ||||||
|  | void CartesianCommunicator::StencilBarrier(void) | ||||||
|  | { | ||||||
|  |   MPI_Barrier  (ShmComm); | ||||||
|  | } | ||||||
|  | //void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||||
|  | //{ | ||||||
|  | //} | ||||||
| void CartesianCommunicator::Barrier(void) | void CartesianCommunicator::Barrier(void) | ||||||
| { | { | ||||||
|   int ierr = MPI_Barrier(communicator); |   int ierr = MPI_Barrier(communicator); | ||||||
| @@ -479,7 +431,7 @@ void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) | |||||||
|  |  | ||||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||||
| { | { | ||||||
|   std::vector<int> row(_ndimension,1); |   Coordinate row(_ndimension,1); | ||||||
|   assert(dim>=0 && dim<_ndimension); |   assert(dim>=0 && dim<_ndimension); | ||||||
|  |  | ||||||
|   //  Split the communicator |   //  Split the communicator | ||||||
| @@ -508,7 +460,4 @@ void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t | |||||||
|   MPI_Type_free(&object); |   MPI_Type_free(&object); | ||||||
| } | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| } |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -27,7 +27,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Info that is setup once and indept of cartesian layout | // Info that is setup once and indept of cartesian layout | ||||||
| @@ -42,17 +42,17 @@ void CartesianCommunicator::Init(int *argc, char *** arv) | |||||||
| 					   GlobalSharedMemory::Hugepages); | 					   GlobalSharedMemory::Hugepages); | ||||||
| } | } | ||||||
|  |  | ||||||
| CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors,const CartesianCommunicator &parent,int &srank)  | CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)  | ||||||
|   : CartesianCommunicator(processors)  |   : CartesianCommunicator(processors)  | ||||||
| { | { | ||||||
|   srank=0; |   srank=0; | ||||||
|   SetCommunicator(communicator_world); |   SetCommunicator(communicator_world); | ||||||
| } | } | ||||||
|  |  | ||||||
| CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors) | CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||||
| { | { | ||||||
|   _processors = processors; |   _processors = processors; | ||||||
|   _ndimension = processors.size(); |   _ndimension = processors.size();  assert(_ndimension>=1); | ||||||
|   _processor_coor.resize(_ndimension); |   _processor_coor.resize(_ndimension); | ||||||
|    |    | ||||||
|   // Require 1^N processor grid for fake |   // Require 1^N processor grid for fake | ||||||
| @@ -70,21 +70,13 @@ CartesianCommunicator::~CartesianCommunicator(){} | |||||||
| void CartesianCommunicator::GlobalSum(float &){} | void CartesianCommunicator::GlobalSum(float &){} | ||||||
| void CartesianCommunicator::GlobalSumVector(float *,int N){} | void CartesianCommunicator::GlobalSumVector(float *,int N){} | ||||||
| void CartesianCommunicator::GlobalSum(double &){} | void CartesianCommunicator::GlobalSum(double &){} | ||||||
|  | void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||||
| void CartesianCommunicator::GlobalSum(uint32_t &){} | void CartesianCommunicator::GlobalSum(uint32_t &){} | ||||||
| void CartesianCommunicator::GlobalSum(uint64_t &){} | void CartesianCommunicator::GlobalSum(uint64_t &){} | ||||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){} | ||||||
| void CartesianCommunicator::GlobalXOR(uint32_t &){} | void CartesianCommunicator::GlobalXOR(uint32_t &){} | ||||||
| void CartesianCommunicator::GlobalXOR(uint64_t &){} | void CartesianCommunicator::GlobalXOR(uint64_t &){} | ||||||
|  |  | ||||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, |  | ||||||
| 					   void *recv, |  | ||||||
| 					   int xmit_to_rank, |  | ||||||
| 					   int recv_from_rank, |  | ||||||
| 					   int bytes) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
|  |  | ||||||
|  |  | ||||||
| // Basic Halo comms primitive -- should never call in single node | // Basic Halo comms primitive -- should never call in single node | ||||||
| void CartesianCommunicator::SendToRecvFrom(void *xmit, | void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||||
| @@ -95,20 +87,6 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | |||||||
| { | { | ||||||
|   assert(0); |   assert(0); | ||||||
| } | } | ||||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, |  | ||||||
| 						void *xmit, |  | ||||||
| 						int dest, |  | ||||||
| 						void *recv, |  | ||||||
| 						int from, |  | ||||||
| 						int bytes) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) |  | ||||||
| { |  | ||||||
|   assert(0); |  | ||||||
| } |  | ||||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||||
| { | { | ||||||
|   bcopy(in,out,bytes*words); |   bcopy(in,out,bytes*words); | ||||||
| @@ -122,8 +100,8 @@ int  CartesianCommunicator::RankWorld(void){return 0;} | |||||||
| void CartesianCommunicator::Barrier(void){} | void CartesianCommunicator::Barrier(void){} | ||||||
| void CartesianCommunicator::Broadcast(int root,void* data, int bytes) {} | void CartesianCommunicator::Broadcast(int root,void* data, int bytes) {} | ||||||
| void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) { } | void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) { } | ||||||
| int  CartesianCommunicator::RankFromProcessorCoor(std::vector<int> &coor) {  return 0;} | int  CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) {  return 0;} | ||||||
| void CartesianCommunicator::ProcessorCoorFromRank(int rank, std::vector<int> &coor){  coor = _processor_coor; } | void CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor){  coor = _processor_coor; } | ||||||
| void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest) | void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest) | ||||||
| { | { | ||||||
|   source =0; |   source =0; | ||||||
| @@ -136,10 +114,6 @@ double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | |||||||
| 						     int recv_from_rank, | 						     int recv_from_rank, | ||||||
| 						     int bytes, int dir) | 						     int bytes, int dir) | ||||||
| { | { | ||||||
|   std::vector<CommsRequest_t> list; |  | ||||||
|   // Discard the "dir" |  | ||||||
|   SendToRecvFromBegin   (list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); |  | ||||||
|   SendToRecvFromComplete(list); |  | ||||||
|   return 2.0*bytes; |   return 2.0*bytes; | ||||||
| } | } | ||||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||||
| @@ -149,17 +123,14 @@ double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsReques | |||||||
| 							 int recv_from_rank, | 							 int recv_from_rank, | ||||||
| 							 int bytes, int dir) | 							 int bytes, int dir) | ||||||
| { | { | ||||||
|   // Discard the "dir" |  | ||||||
|   SendToRecvFromBegin(list,xmit,xmit_to_rank,recv,recv_from_rank,bytes); |  | ||||||
|   return 2.0*bytes; |   return 2.0*bytes; | ||||||
| } | } | ||||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | ||||||
| { | { | ||||||
|   SendToRecvFromComplete(waitall); |  | ||||||
| } | } | ||||||
|  |  | ||||||
| void CartesianCommunicator::StencilBarrier(void){}; | void CartesianCommunicator::StencilBarrier(void){}; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| } |  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -28,10 +28,11 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|  |  | ||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| namespace Grid {  | NAMESPACE_BEGIN(Grid);  | ||||||
|  |  | ||||||
| // static data | // static data | ||||||
|  |  | ||||||
|  | int                 GlobalSharedMemory::HPEhypercube = 1; | ||||||
| uint64_t            GlobalSharedMemory::MAX_MPI_SHM_BYTES   = 1024LL*1024LL*1024LL;  | uint64_t            GlobalSharedMemory::MAX_MPI_SHM_BYTES   = 1024LL*1024LL*1024LL;  | ||||||
| int                 GlobalSharedMemory::Hugepages = 0; | int                 GlobalSharedMemory::Hugepages = 0; | ||||||
| int                 GlobalSharedMemory::_ShmSetup; | int                 GlobalSharedMemory::_ShmSetup; | ||||||
| @@ -73,9 +74,12 @@ void *SharedMemory::ShmBufferMalloc(size_t bytes){ | |||||||
|   if (heap_bytes >= heap_size) { |   if (heap_bytes >= heap_size) { | ||||||
|     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; |     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; | ||||||
|     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; |     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; | ||||||
|     std::cout<< " Current value is " << (heap_size/(1024*1024)) <<std::endl; |     std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl; | ||||||
|  |     std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl; | ||||||
|  |     std::cout<< " Current heap  is " << (heap_size/(1024*1024)) <<"MB"<<std::endl; | ||||||
|     assert(heap_bytes<heap_size); |     assert(heap_bytes<heap_size); | ||||||
|   } |   } | ||||||
|  |   //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl; | ||||||
|   return ptr; |   return ptr; | ||||||
| } | } | ||||||
| void SharedMemory::ShmBufferFreeAll(void) {  | void SharedMemory::ShmBufferFreeAll(void) {  | ||||||
| @@ -84,9 +88,9 @@ void SharedMemory::ShmBufferFreeAll(void) { | |||||||
| } | } | ||||||
| void *SharedMemory::ShmBufferSelf(void) | void *SharedMemory::ShmBufferSelf(void) | ||||||
| { | { | ||||||
|  |   //std::cerr << "ShmBufferSelf "<<ShmRank<<" "<<std::hex<< ShmCommBufs[ShmRank] <<std::dec<<std::endl; | ||||||
|   return ShmCommBufs[ShmRank]; |   return ShmCommBufs[ShmRank]; | ||||||
| } | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid);  | ||||||
|  |  | ||||||
|  |  | ||||||
| } |  | ||||||
|   | |||||||
| @@ -25,18 +25,6 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
|  |  | ||||||
|  |  | ||||||
| // TODO |  | ||||||
| // 1) move includes into SharedMemory.cc |  | ||||||
| // |  | ||||||
| // 2) split shared memory into a) optimal communicator creation from comm world |  | ||||||
| //  |  | ||||||
| //                             b) shared memory buffers container |  | ||||||
| //                                -- static globally shared; init once |  | ||||||
| //                                -- per instance set of buffers. |  | ||||||
| //                                    |  | ||||||
|  |  | ||||||
| #pragma once  | #pragma once  | ||||||
|  |  | ||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
| @@ -53,11 +41,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <sys/shm.h> | #include <sys/shm.h> | ||||||
| #include <sys/mman.h> | #include <sys/mman.h> | ||||||
| #include <zlib.h> | #include <zlib.h> | ||||||
| #ifdef HAVE_NUMAIF_H |  | ||||||
| #include <numaif.h> |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| #if defined (GRID_COMMS_MPI3)  | #if defined (GRID_COMMS_MPI3)  | ||||||
| typedef MPI_Comm    Grid_MPI_Comm; | typedef MPI_Comm    Grid_MPI_Comm; | ||||||
| @@ -71,12 +56,18 @@ class GlobalSharedMemory { | |||||||
| private: | private: | ||||||
|   static const int     MAXLOG2RANKSPERNODE = 16;             |   static const int     MAXLOG2RANKSPERNODE = 16;             | ||||||
|  |  | ||||||
|  |  | ||||||
|   // Init once lock on the buffer allocation |   // Init once lock on the buffer allocation | ||||||
|   static int      _ShmSetup; |   static int      _ShmSetup; | ||||||
|   static int      _ShmAlloc; |   static int      _ShmAlloc; | ||||||
|   static uint64_t _ShmAllocBytes; |   static uint64_t _ShmAllocBytes; | ||||||
|  |  | ||||||
| public: | public: | ||||||
|  |   /////////////////////////////////////// | ||||||
|  |   // HPE 8600 hypercube optimisation | ||||||
|  |   /////////////////////////////////////// | ||||||
|  |   static int HPEhypercube; | ||||||
|  |  | ||||||
|   static int      ShmSetup(void)      { return _ShmSetup; } |   static int      ShmSetup(void)      { return _ShmSetup; } | ||||||
|   static int      ShmAlloc(void)      { return _ShmAlloc; } |   static int      ShmAlloc(void)      { return _ShmAlloc; } | ||||||
|   static uint64_t ShmAllocBytes(void) { return _ShmAllocBytes; } |   static uint64_t ShmAllocBytes(void) { return _ShmAllocBytes; } | ||||||
| @@ -102,12 +93,17 @@ class GlobalSharedMemory { | |||||||
|   // Create an optimal reordered communicator that makes MPI_Cart_create get it right |   // Create an optimal reordered communicator that makes MPI_Cart_create get it right | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   static void Init(Grid_MPI_Comm comm); // Typically MPI_COMM_WORLD |   static void Init(Grid_MPI_Comm comm); // Typically MPI_COMM_WORLD | ||||||
|   static void OptimalCommunicator(const std::vector<int> &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian |   static void OptimalCommunicator            (const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||||
|  |   static void OptimalCommunicatorHypercube   (const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||||
|  |   static void OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm);  // Turns MPI_COMM_WORLD into right layout for Cartesian | ||||||
|  |   static void GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims); | ||||||
|   /////////////////////////////////////////////////// |   /////////////////////////////////////////////////// | ||||||
|   // Provide shared memory facilities off comm world |   // Provide shared memory facilities off comm world | ||||||
|   /////////////////////////////////////////////////// |   /////////////////////////////////////////////////// | ||||||
|   static void SharedMemoryAllocate(uint64_t bytes, int flags); |   static void SharedMemoryAllocate(uint64_t bytes, int flags); | ||||||
|   static void SharedMemoryFree(void); |   static void SharedMemoryFree(void); | ||||||
|  |   static void SharedMemoryCopy(void *dest,void *src,size_t bytes); | ||||||
|  |   static void SharedMemoryZero(void *dest,size_t bytes); | ||||||
|  |  | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -148,6 +144,7 @@ class SharedMemory | |||||||
|   // Call on any instance |   // Call on any instance | ||||||
|   /////////////////////////////////////////////////// |   /////////////////////////////////////////////////// | ||||||
|   void SharedMemoryTest(void); |   void SharedMemoryTest(void); | ||||||
|  |    | ||||||
|   void *ShmBufferSelf(void); |   void *ShmBufferSelf(void); | ||||||
|   void *ShmBuffer    (int rank); |   void *ShmBuffer    (int rank); | ||||||
|   void *ShmBufferTranslate(int rank,void * local_p); |   void *ShmBufferTranslate(int rank,void * local_p); | ||||||
| @@ -162,4 +159,5 @@ class SharedMemory | |||||||
|  |  | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|   | |||||||
| @@ -29,8 +29,15 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
| #include <pwd.h> | #include <pwd.h> | ||||||
|  |  | ||||||
| namespace Grid {  | #ifdef GRID_CUDA | ||||||
|  | #include <cuda_runtime_api.h> | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  | #include <hip/hip_runtime_api.h> | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid);  | ||||||
|  | #define header "SharedMemoryMpi: " | ||||||
| /*Construct from an MPI communicator*/ | /*Construct from an MPI communicator*/ | ||||||
| void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||||
| { | { | ||||||
| @@ -43,9 +50,19 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | |||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|   // Split into groups that can share memory |   // Split into groups that can share memory | ||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm); |   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&WorldShmComm); | ||||||
|  | #else | ||||||
|  |   MPI_Comm_split(comm, WorldRank, 0, &WorldShmComm); | ||||||
|  | #endif | ||||||
|  |  | ||||||
|   MPI_Comm_rank(WorldShmComm     ,&WorldShmRank); |   MPI_Comm_rank(WorldShmComm     ,&WorldShmRank); | ||||||
|   MPI_Comm_size(WorldShmComm     ,&WorldShmSize); |   MPI_Comm_size(WorldShmComm     ,&WorldShmSize); | ||||||
|  |  | ||||||
|  |   if ( WorldRank == 0) { | ||||||
|  |     std::cout << header " World communicator of size " <<WorldSize << std::endl;   | ||||||
|  |     std::cout << header " Node  communicator of size " <<WorldShmSize << std::endl; | ||||||
|  |   } | ||||||
|   // WorldShmComm, WorldShmSize, WorldShmRank |   // WorldShmComm, WorldShmSize, WorldShmRank | ||||||
|  |  | ||||||
|   // WorldNodes |   // WorldNodes | ||||||
| @@ -130,9 +147,60 @@ int Log2Size(int TwoToPower,int MAXLOG2) | |||||||
|   } |   } | ||||||
|   return log2size; |   return log2size; | ||||||
| } | } | ||||||
| void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors,Grid_MPI_Comm & optimal_comm) | void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||||
|  | { | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Look and see if it looks like an HPE 8600 based on hostname conventions | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   const int namelen = _POSIX_HOST_NAME_MAX; | ||||||
|  |   char name[namelen]; | ||||||
|  |   int R; | ||||||
|  |   int I; | ||||||
|  |   int N; | ||||||
|  |   gethostname(name,namelen); | ||||||
|  |   int nscan = sscanf(name,"r%di%dn%d",&R,&I,&N) ; | ||||||
|  |  | ||||||
|  |   if(nscan==3 && HPEhypercube ) OptimalCommunicatorHypercube(processors,optimal_comm); | ||||||
|  |   else                          OptimalCommunicatorSharedMemory(processors,optimal_comm); | ||||||
|  | } | ||||||
|  | static inline int divides(int a,int b) | ||||||
|  | { | ||||||
|  |   return ( b == ( (b/a)*a ) ); | ||||||
|  | } | ||||||
|  | void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | ||||||
|  | { | ||||||
|  |   //////////////////////////////////////////////////////////////// | ||||||
|  |   // Powers of 2,3,5 only in prime decomposition for now | ||||||
|  |   //////////////////////////////////////////////////////////////// | ||||||
|  |   int ndimension = WorldDims.size(); | ||||||
|  |   ShmDims=Coordinate(ndimension,1); | ||||||
|  |  | ||||||
|  |   std::vector<int> primes({2,3,5}); | ||||||
|  |  | ||||||
|  |   int dim = 0; | ||||||
|  |   int last_dim = ndimension - 1; | ||||||
|  |   int AutoShmSize = 1; | ||||||
|  |   while(AutoShmSize != WorldShmSize) { | ||||||
|  |     int p; | ||||||
|  |     for(p=0;p<primes.size();p++) { | ||||||
|  |       int prime=primes[p]; | ||||||
|  |       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) | ||||||
|  |         && divides(prime,WorldShmSize/AutoShmSize)  ) { | ||||||
|  | 	AutoShmSize*=prime; | ||||||
|  | 	ShmDims[dim]*=prime; | ||||||
|  | 	last_dim = dim; | ||||||
|  | 	break; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |     if (p == primes.size() && last_dim == dim) { | ||||||
|  |       std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl; | ||||||
|  |       exit(EXIT_FAILURE); | ||||||
|  |     } | ||||||
|  |     dim=(dim+1) %ndimension; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  | void GlobalSharedMemory::OptimalCommunicatorHypercube(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||||
| { | { | ||||||
| #ifdef HYPERCUBE |  | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Assert power of two shm_size. |   // Assert power of two shm_size. | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
| @@ -173,9 +241,9 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
|   } |   } | ||||||
|  |  | ||||||
|   std::string hname(name); |   std::string hname(name); | ||||||
|   std::cout << "hostname "<<hname<<std::endl; |   //  std::cout << "hostname "<<hname<<std::endl; | ||||||
|   std::cout << "R " << R << " I " << I << " N "<< N |   //  std::cout << "R " << R << " I " << I << " N "<< N | ||||||
|             << " hypercoor 0x"<<std::hex<<hypercoor<<std::dec<<std::endl; |   //            << " hypercoor 0x"<<std::hex<<hypercoor<<std::dec<<std::endl; | ||||||
|  |  | ||||||
|   ////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////// | ||||||
|   // broadcast node 0's base coordinate for this partition. |   // broadcast node 0's base coordinate for this partition. | ||||||
| @@ -197,16 +265,13 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
|   // in a maximally symmetrical way |   // in a maximally symmetrical way | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   int ndimension              = processors.size(); |   int ndimension              = processors.size(); | ||||||
|   std::vector<int> processor_coor(ndimension); |   Coordinate processor_coor(ndimension); | ||||||
|   std::vector<int> WorldDims = processors;   std::vector<int> ShmDims  (ndimension,1);  std::vector<int> NodeDims (ndimension); |   Coordinate WorldDims = processors; | ||||||
|   std::vector<int> ShmCoor  (ndimension);    std::vector<int> NodeCoor (ndimension);    std::vector<int> WorldCoor(ndimension); |   Coordinate ShmDims  (ndimension);  Coordinate NodeDims (ndimension); | ||||||
|   std::vector<int> HyperCoor(ndimension); |   Coordinate ShmCoor  (ndimension);    Coordinate NodeCoor (ndimension);    Coordinate WorldCoor(ndimension); | ||||||
|   int dim = 0; |   Coordinate HyperCoor(ndimension); | ||||||
|   for(int l2=0;l2<log2size;l2++){ |  | ||||||
|     while ( (WorldDims[dim] / ShmDims[dim]) <= 1 ) dim=(dim+1)%ndimension; |   GetShmDims(WorldDims,ShmDims); | ||||||
|     ShmDims[dim]*=2; |  | ||||||
|     dim=(dim+1)%ndimension; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Establish torus of processes and nodes with sub-blockings |   // Establish torus of processes and nodes with sub-blockings | ||||||
| @@ -253,28 +318,19 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
|   ///////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////// | ||||||
|   int ierr= MPI_Comm_split(WorldComm,0,rank,&optimal_comm); |   int ierr= MPI_Comm_split(WorldComm,0,rank,&optimal_comm); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| #else  | } | ||||||
|   //////////////////////////////////////////////////////////////// | void GlobalSharedMemory::OptimalCommunicatorSharedMemory(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||||
|   // Assert power of two shm_size. | { | ||||||
|   //////////////////////////////////////////////////////////////// |  | ||||||
|   int log2size = Log2Size(WorldShmSize,MAXLOG2RANKSPERNODE); |  | ||||||
|   assert(log2size != -1); |  | ||||||
|  |  | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Identify subblock of ranks on node spreading across dims |   // Identify subblock of ranks on node spreading across dims | ||||||
|   // in a maximally symmetrical way |   // in a maximally symmetrical way | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   int ndimension              = processors.size(); |   int ndimension              = processors.size(); | ||||||
|   std::vector<int> processor_coor(ndimension); |   Coordinate processor_coor(ndimension); | ||||||
|   std::vector<int> WorldDims = processors;   std::vector<int> ShmDims  (ndimension,1);  std::vector<int> NodeDims (ndimension); |   Coordinate WorldDims = processors; Coordinate ShmDims(ndimension);  Coordinate NodeDims (ndimension); | ||||||
|   std::vector<int> ShmCoor  (ndimension);    std::vector<int> NodeCoor (ndimension);    std::vector<int> WorldCoor(ndimension); |   Coordinate ShmCoor(ndimension);    Coordinate NodeCoor(ndimension);   Coordinate WorldCoor(ndimension); | ||||||
|   int dim = 0; |  | ||||||
|   for(int l2=0;l2<log2size;l2++){ |  | ||||||
|     while ( (WorldDims[dim] / ShmDims[dim]) <= 1 ) dim=(dim+1)%ndimension; |  | ||||||
|     ShmDims[dim]*=2; |  | ||||||
|     dim=(dim+1)%ndimension; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|  |   GetShmDims(WorldDims,ShmDims); | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
|   // Establish torus of processes and nodes with sub-blockings |   // Establish torus of processes and nodes with sub-blockings | ||||||
|   //////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////// | ||||||
| @@ -306,7 +362,6 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
|   ///////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////// | ||||||
|   int ierr= MPI_Comm_split(WorldComm,0,rank,&optimal_comm); |   int ierr= MPI_Comm_split(WorldComm,0,rank,&optimal_comm); | ||||||
|   assert(ierr==0); |   assert(ierr==0); | ||||||
| #endif |  | ||||||
| } | } | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // SHMGET | // SHMGET | ||||||
| @@ -314,7 +369,7 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
| #ifdef GRID_MPI3_SHMGET | #ifdef GRID_MPI3_SHMGET | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   std::cout << "SharedMemoryAllocate "<< bytes<< " shmget implementation "<<std::endl; |   std::cout << header "SharedMemoryAllocate "<< bytes<< " shmget implementation "<<std::endl; | ||||||
|   assert(_ShmSetup==1); |   assert(_ShmSetup==1); | ||||||
|   assert(_ShmAlloc==0); |   assert(_ShmAlloc==0); | ||||||
|  |  | ||||||
| @@ -337,7 +392,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|         int errsv = errno; |         int errsv = errno; | ||||||
|         printf("Errno %d\n",errsv); |         printf("Errno %d\n",errsv); | ||||||
|         printf("key   %d\n",key); |         printf("key   %d\n",key); | ||||||
|         printf("size  %lld\n",size); |         printf("size  %ld\n",size); | ||||||
|         printf("flags %d\n",flags); |         printf("flags %d\n",flags); | ||||||
|         perror("shmget"); |         perror("shmget"); | ||||||
|         exit(1); |         exit(1); | ||||||
| @@ -373,10 +428,122 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Hugetlbfs mapping intended | // Hugetlbfs mapping intended | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | #if defined(GRID_CUDA) ||defined(GRID_HIP) | ||||||
|  | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
|  | { | ||||||
|  |   void * ShmCommBuf ;  | ||||||
|  |   assert(_ShmSetup==1); | ||||||
|  |   assert(_ShmAlloc==0); | ||||||
|  |  | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // allocate the pointer array for shared windows for our group | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   MPI_Barrier(WorldShmComm); | ||||||
|  |   WorldShmCommBufs.resize(WorldShmSize); | ||||||
|  |  | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // TODO/FIXME : NOT ALL NVLINK BOARDS have full Peer to peer connectivity. | ||||||
|  |   // The annoyance is that they have partial peer 2 peer. This occurs on the 8 GPU blades. | ||||||
|  |   // e.g. DGX1, supermicro board,  | ||||||
|  |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   //  cudaDeviceGetP2PAttribute(&perfRank, cudaDevP2PAttrPerformanceRank, device1, device2); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Each MPI rank should allocate our own buffer | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||||
|  |  | ||||||
|  |   if (ShmCommBuf == (void *)NULL ) { | ||||||
|  |     std::cerr << " SharedMemoryMPI.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||||
|  |     exit(EXIT_FAILURE);   | ||||||
|  |   } | ||||||
|  |   //  if ( WorldRank == 0 ){ | ||||||
|  |   if ( 1 ){ | ||||||
|  |     std::cout << WorldRank << header " SharedMemoryMPI.cc acceleratorAllocDevice "<< bytes  | ||||||
|  | 	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||||
|  |   } | ||||||
|  |   SharedMemoryZero(ShmCommBuf,bytes); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Loop over ranks/gpu's on our node | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   for(int r=0;r<WorldShmSize;r++){ | ||||||
|  |  | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|  |     ////////////////////////////////////////////////// | ||||||
|  |     // If it is me, pass around the IPC access key | ||||||
|  |     ////////////////////////////////////////////////// | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |     cudaIpcMemHandle_t handle; | ||||||
|  |     if ( r==WorldShmRank ) {  | ||||||
|  |       auto err = cudaIpcGetMemHandle(&handle,ShmCommBuf); | ||||||
|  |       if ( err !=  cudaSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc cudaIpcGetMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |     hipIpcMemHandle_t handle;     | ||||||
|  |     if ( r==WorldShmRank ) {  | ||||||
|  |       auto err = hipIpcGetMemHandle(&handle,ShmCommBuf); | ||||||
|  |       if ( err !=  hipSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc hipIpcGetMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  |     ////////////////////////////////////////////////// | ||||||
|  |     // Share this IPC handle across the Shm Comm | ||||||
|  |     ////////////////////////////////////////////////// | ||||||
|  |     {  | ||||||
|  |       int ierr=MPI_Bcast(&handle, | ||||||
|  | 			 sizeof(handle), | ||||||
|  | 			 MPI_BYTE, | ||||||
|  | 			 r, | ||||||
|  | 			 WorldShmComm); | ||||||
|  |       assert(ierr==0); | ||||||
|  |     } | ||||||
|  |      | ||||||
|  |     /////////////////////////////////////////////////////////////// | ||||||
|  |     // If I am not the source, overwrite thisBuf with remote buffer | ||||||
|  |     /////////////////////////////////////////////////////////////// | ||||||
|  |     void * thisBuf = ShmCommBuf; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |     if ( r!=WorldShmRank ) {  | ||||||
|  |       auto err = cudaIpcOpenMemHandle(&thisBuf,handle,cudaIpcMemLazyEnablePeerAccess); | ||||||
|  |       if ( err !=  cudaSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc cudaIpcOpenMemHandle failed for rank" << r <<" "<<cudaGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |     if ( r!=WorldShmRank ) {  | ||||||
|  |       auto err = hipIpcOpenMemHandle(&thisBuf,handle,hipIpcMemLazyEnablePeerAccess); | ||||||
|  |       if ( err !=  hipSuccess) { | ||||||
|  | 	std::cerr << " SharedMemoryMPI.cc hipIpcOpenMemHandle failed for rank" << r <<" "<<hipGetErrorString(err)<< std::endl; | ||||||
|  | 	exit(EXIT_FAILURE); | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  | #endif | ||||||
|  |     /////////////////////////////////////////////////////////////// | ||||||
|  |     // Save a copy of the device buffers | ||||||
|  |     /////////////////////////////////////////////////////////////// | ||||||
|  |     WorldShmCommBufs[r] = thisBuf; | ||||||
|  | #else | ||||||
|  |     WorldShmCommBufs[r] = ShmCommBuf; | ||||||
|  | #endif | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   _ShmAllocBytes=bytes; | ||||||
|  |   _ShmAlloc=1; | ||||||
|  | } | ||||||
|  | #else  | ||||||
| #ifdef GRID_MPI3_SHMMMAP | #ifdef GRID_MPI3_SHMMMAP | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   std::cout << "SharedMemoryAllocate "<< bytes<< " MMAP implementation "<< GRID_SHM_PATH <<std::endl; |   std::cout << header "SharedMemoryAllocate "<< bytes<< " MMAP implementation "<< GRID_SHM_PATH <<std::endl; | ||||||
|   assert(_ShmSetup==1); |   assert(_ShmSetup==1); | ||||||
|   assert(_ShmAlloc==0); |   assert(_ShmAlloc==0); | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -413,7 +580,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|     assert(((uint64_t)ptr&0x3F)==0); |     assert(((uint64_t)ptr&0x3F)==0); | ||||||
|     close(fd); |     close(fd); | ||||||
|     WorldShmCommBufs[r] =ptr; |     WorldShmCommBufs[r] =ptr; | ||||||
|     std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; |     //    std::cout << header "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; | ||||||
|   } |   } | ||||||
|   _ShmAlloc=1; |   _ShmAlloc=1; | ||||||
|   _ShmAllocBytes  = bytes; |   _ShmAllocBytes  = bytes; | ||||||
| @@ -423,7 +590,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| #ifdef GRID_MPI3_SHM_NONE | #ifdef GRID_MPI3_SHM_NONE | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   std::cout << "SharedMemoryAllocate "<< bytes<< " MMAP anonymous implementation "<<std::endl; |   std::cout << header "SharedMemoryAllocate "<< bytes<< " MMAP anonymous implementation "<<std::endl; | ||||||
|   assert(_ShmSetup==1); |   assert(_ShmSetup==1); | ||||||
|   assert(_ShmAlloc==0); |   assert(_ShmAlloc==0); | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -455,7 +622,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|     assert(((uint64_t)ptr&0x3F)==0); |     assert(((uint64_t)ptr&0x3F)==0); | ||||||
|     close(fd); |     close(fd); | ||||||
|     WorldShmCommBufs[r] =ptr; |     WorldShmCommBufs[r] =ptr; | ||||||
|     std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; |     //    std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< bytes<< "bytes)"<<std::endl; | ||||||
|   } |   } | ||||||
|   _ShmAlloc=1; |   _ShmAlloc=1; | ||||||
|   _ShmAllocBytes  = bytes; |   _ShmAllocBytes  = bytes; | ||||||
| @@ -470,7 +637,7 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| {  | {  | ||||||
|   std::cout << "SharedMemoryAllocate "<< bytes<< " SHMOPEN implementation "<<std::endl; |   std::cout << header "SharedMemoryAllocate "<< bytes<< " SHMOPEN implementation "<<std::endl; | ||||||
|   assert(_ShmSetup==1); |   assert(_ShmSetup==1); | ||||||
|   assert(_ShmAlloc==0);  |   assert(_ShmAlloc==0);  | ||||||
|   MPI_Barrier(WorldShmComm); |   MPI_Barrier(WorldShmComm); | ||||||
| @@ -499,7 +666,6 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
| #endif | #endif | ||||||
|       void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0); |       void * ptr =  mmap(NULL,size, PROT_READ | PROT_WRITE, mmap_flag, fd, 0); | ||||||
|        |        | ||||||
|       std::cout << "Set WorldShmCommBufs["<<r<<"]="<<ptr<< "("<< size<< "bytes)"<<std::endl; |  | ||||||
|       if ( ptr == (void * )MAP_FAILED ) {        |       if ( ptr == (void * )MAP_FAILED ) {        | ||||||
| 	perror("failed mmap");      | 	perror("failed mmap");      | ||||||
| 	assert(0);     | 	assert(0);     | ||||||
| @@ -536,10 +702,27 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|   _ShmAllocBytes = bytes; |   _ShmAllocBytes = bytes; | ||||||
| } | } | ||||||
| #endif | #endif | ||||||
|  | #endif // End NVCC case for GPU device buffers | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////// | ||||||
|  | // Routines accessing shared memory should route through for GPU safety | ||||||
|  | ///////////////////////////////////////////////////////////////////////// | ||||||
|  | void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||||
|  | { | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   cudaMemset(dest,0,bytes); | ||||||
|  | #else | ||||||
|  |   bzero(dest,bytes); | ||||||
|  | #endif | ||||||
|  | } | ||||||
|  | void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||||
|  | { | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   cudaMemcpy(dest,src,bytes,cudaMemcpyDefault); | ||||||
|  | #else    | ||||||
|  |   bcopy(src,dest,bytes); | ||||||
|  | #endif | ||||||
|  | } | ||||||
| //////////////////////////////////////////////////////// | //////////////////////////////////////////////////////// | ||||||
| // Global shared functionality finished | // Global shared functionality finished | ||||||
| // Now move to per communicator functionality | // Now move to per communicator functionality | ||||||
| @@ -554,7 +737,11 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | |||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|   // Split into groups that can share memory |   // Split into groups that can share memory | ||||||
|   ///////////////////////////////////////////////////////////////////// |   ///////////////////////////////////////////////////////////////////// | ||||||
|  | #ifndef GRID_MPI3_SHM_NONE | ||||||
|   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm); |   MPI_Comm_split_type(comm, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL,&ShmComm); | ||||||
|  | #else | ||||||
|  |   MPI_Comm_split(comm, rank, 0, &ShmComm); | ||||||
|  | #endif | ||||||
|   MPI_Comm_rank(ShmComm     ,&ShmRank); |   MPI_Comm_rank(ShmComm     ,&ShmRank); | ||||||
|   MPI_Comm_size(ShmComm     ,&ShmSize); |   MPI_Comm_size(ShmComm     ,&ShmSize); | ||||||
|   ShmCommBufs.resize(ShmSize); |   ShmCommBufs.resize(ShmSize); | ||||||
| @@ -571,7 +758,6 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | |||||||
|     MPI_Allreduce(MPI_IN_PLACE,&wsr,1,MPI_UINT32_T,MPI_SUM,ShmComm); |     MPI_Allreduce(MPI_IN_PLACE,&wsr,1,MPI_UINT32_T,MPI_SUM,ShmComm); | ||||||
|  |  | ||||||
|     ShmCommBufs[r] = GlobalSharedMemory::WorldShmCommBufs[wsr]; |     ShmCommBufs[r] = GlobalSharedMemory::WorldShmCommBufs[wsr]; | ||||||
|     //    std::cout << "SetCommunicator ShmCommBufs ["<< r<< "] = "<< ShmCommBufs[r]<< "  wsr = "<<wsr<<std::endl; |  | ||||||
|   } |   } | ||||||
|   ShmBufferFreeAll(); |   ShmBufferFreeAll(); | ||||||
|  |  | ||||||
| @@ -584,6 +770,19 @@ void SharedMemory::SetCommunicator(Grid_MPI_Comm comm) | |||||||
|  |  | ||||||
|   std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r; |   std::vector<int> ranks(size);   for(int r=0;r<size;r++) ranks[r]=r; | ||||||
|   MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);  |   MPI_Group_translate_ranks (FullGroup,size,&ranks[0],ShmGroup, &ShmRanks[0]);  | ||||||
|  |  | ||||||
|  | #ifdef GRID_SHM_FORCE_MPI | ||||||
|  |   // Hide the shared memory path between ranks | ||||||
|  |   { | ||||||
|  |     for(int r=0;r<size;r++){ | ||||||
|  |       if ( r!=rank ) { | ||||||
|  | 	ShmRanks[r] = MPI_UNDEFINED; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |   SharedMemoryTest(); | ||||||
| } | } | ||||||
| ////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////// | ||||||
| // On node barrier | // On node barrier | ||||||
| @@ -598,25 +797,27 @@ void SharedMemory::ShmBarrier(void) | |||||||
| void SharedMemory::SharedMemoryTest(void) | void SharedMemory::SharedMemoryTest(void) | ||||||
| { | { | ||||||
|   ShmBarrier(); |   ShmBarrier(); | ||||||
|  |   uint64_t check[3]; | ||||||
|  |   uint64_t magic = 0x5A5A5A; | ||||||
|   if ( ShmRank == 0 ) { |   if ( ShmRank == 0 ) { | ||||||
|     for(int r=0;r<ShmSize;r++){ |     for(uint64_t r=0;r<ShmSize;r++){ | ||||||
|       uint64_t * check = (uint64_t *) ShmCommBufs[r]; |  | ||||||
|        check[0]=GlobalSharedMemory::WorldNode; |        check[0]=GlobalSharedMemory::WorldNode; | ||||||
|        check[1]=r; |        check[1]=r; | ||||||
|       check[2] = 0x5A5A5A; |        check[2]=magic; | ||||||
|  |        GlobalSharedMemory::SharedMemoryCopy( ShmCommBufs[r], check, 3*sizeof(uint64_t)); | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|   ShmBarrier(); |   ShmBarrier(); | ||||||
|   for(int r=0;r<ShmSize;r++){ |   for(uint64_t r=0;r<ShmSize;r++){ | ||||||
|     uint64_t * check = (uint64_t *) ShmCommBufs[r]; |     ShmBarrier(); | ||||||
|      |     GlobalSharedMemory::SharedMemoryCopy(check,ShmCommBufs[r], 3*sizeof(uint64_t)); | ||||||
|  |     ShmBarrier(); | ||||||
|     assert(check[0]==GlobalSharedMemory::WorldNode); |     assert(check[0]==GlobalSharedMemory::WorldNode); | ||||||
|     assert(check[1]==r); |     assert(check[1]==r); | ||||||
|     assert(check[2]==0x5A5A5A); |     assert(check[2]==magic); | ||||||
|      |  | ||||||
|   } |  | ||||||
|     ShmBarrier(); |     ShmBarrier(); | ||||||
|   } |   } | ||||||
|  | } | ||||||
|  |  | ||||||
| void *SharedMemory::ShmBuffer(int rank) | void *SharedMemory::ShmBuffer(int rank) | ||||||
| { | { | ||||||
| @@ -629,7 +830,6 @@ void *SharedMemory::ShmBuffer(int rank) | |||||||
| } | } | ||||||
| void *SharedMemory::ShmBufferTranslate(int rank,void * local_p) | void *SharedMemory::ShmBufferTranslate(int rank,void * local_p) | ||||||
| { | { | ||||||
|   static int count =0; |  | ||||||
|   int gpeer = ShmRanks[rank]; |   int gpeer = ShmRanks[rank]; | ||||||
|   assert(gpeer!=ShmRank); // never send to self |   assert(gpeer!=ShmRank); // never send to self | ||||||
|   if (gpeer == MPI_UNDEFINED){ |   if (gpeer == MPI_UNDEFINED){ | ||||||
| @@ -648,4 +848,5 @@ SharedMemory::~SharedMemory() | |||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid);  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -28,7 +28,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|  |  | ||||||
| #include <Grid/GridCore.h> | #include <Grid/GridCore.h> | ||||||
|  |  | ||||||
| namespace Grid {  | NAMESPACE_BEGIN(Grid);  | ||||||
|  | #define header "SharedMemoryNone: " | ||||||
|  |  | ||||||
| /*Construct from an MPI communicator*/ | /*Construct from an MPI communicator*/ | ||||||
| void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | ||||||
| @@ -47,7 +48,7 @@ void GlobalSharedMemory::Init(Grid_MPI_Comm comm) | |||||||
|   _ShmSetup=1; |   _ShmSetup=1; | ||||||
| } | } | ||||||
|  |  | ||||||
| void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors,Grid_MPI_Comm & optimal_comm) | void GlobalSharedMemory::OptimalCommunicator(const Coordinate &processors,Grid_MPI_Comm & optimal_comm) | ||||||
| { | { | ||||||
|   optimal_comm = WorldComm; |   optimal_comm = WorldComm; | ||||||
| } | } | ||||||
| @@ -55,6 +56,38 @@ void GlobalSharedMemory::OptimalCommunicator(const std::vector<int> &processors, | |||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Hugetlbfs mapping intended, use anonymous mmap | // Hugetlbfs mapping intended, use anonymous mmap | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | #if 1 | ||||||
|  | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
|  | { | ||||||
|  |   std::cout << header "SharedMemoryAllocate "<< bytes<< " GPU implementation "<<std::endl; | ||||||
|  |   void * ShmCommBuf ;  | ||||||
|  |   assert(_ShmSetup==1); | ||||||
|  |   assert(_ShmAlloc==0); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Each MPI rank should allocate our own buffer | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   ShmCommBuf = acceleratorAllocDevice(bytes); | ||||||
|  |  | ||||||
|  |   if (ShmCommBuf == (void *)NULL ) { | ||||||
|  |     std::cerr << " SharedMemoryNone.cc acceleratorAllocDevice failed NULL pointer for " << bytes<<" bytes " << std::endl; | ||||||
|  |     exit(EXIT_FAILURE);   | ||||||
|  |   } | ||||||
|  |   if ( WorldRank == 0 ){ | ||||||
|  |     std::cout << WorldRank << header " SharedMemoryNone.cc acceleratorAllocDevice "<< bytes  | ||||||
|  | 	      << "bytes at "<< std::hex<< ShmCommBuf <<std::dec<<" for comms buffers " <<std::endl; | ||||||
|  |   } | ||||||
|  |   SharedMemoryZero(ShmCommBuf,bytes); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Loop over ranks/gpu's on our node | ||||||
|  |   /////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   WorldShmCommBufs[0] = ShmCommBuf; | ||||||
|  |  | ||||||
|  |   _ShmAllocBytes=bytes; | ||||||
|  |   _ShmAlloc=1; | ||||||
|  | } | ||||||
|  | #else | ||||||
| void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | ||||||
| { | { | ||||||
|   void * ShmCommBuf ;  |   void * ShmCommBuf ;  | ||||||
| @@ -83,7 +116,15 @@ void GlobalSharedMemory::SharedMemoryAllocate(uint64_t bytes, int flags) | |||||||
|   _ShmAllocBytes=bytes; |   _ShmAllocBytes=bytes; | ||||||
|   _ShmAlloc=1; |   _ShmAlloc=1; | ||||||
| }; | }; | ||||||
|  | #endif | ||||||
|  | void GlobalSharedMemory::SharedMemoryZero(void *dest,size_t bytes) | ||||||
|  | { | ||||||
|  |   acceleratorMemSet(dest,0,bytes); | ||||||
|  | } | ||||||
|  | void GlobalSharedMemory::SharedMemoryCopy(void *dest,void *src,size_t bytes) | ||||||
|  | { | ||||||
|  |   acceleratorCopyToDevice(src,dest,bytes); | ||||||
|  | } | ||||||
| //////////////////////////////////////////////////////// | //////////////////////////////////////////////////////// | ||||||
| // Global shared functionality finished | // Global shared functionality finished | ||||||
| // Now move to per communicator functionality | // Now move to per communicator functionality | ||||||
| @@ -125,4 +166,5 @@ void *SharedMemory::ShmBufferTranslate(int rank,void * local_p) | |||||||
| SharedMemory::~SharedMemory() | SharedMemory::~SharedMemory() | ||||||
| {}; | {}; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid);  | ||||||
|  |  | ||||||
|   | |||||||
| @@ -49,4 +49,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifdef GRID_COMMS_SHMEM | #ifdef GRID_COMMS_SHMEM | ||||||
| #include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator | #include <Grid/cshift/Cshift_mpi.h> // uses same implementation of communicator | ||||||
| #endif  | #endif  | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto Cshift(const Expression &expr,int dim,int shift)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return Cshift(closure(expr),dim,shift); | ||||||
|  | } | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -25,37 +25,39 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #ifndef _GRID_CSHIFT_COMMON_H_ | #pragma once | ||||||
| #define _GRID_CSHIFT_COMMON_H_ |  | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | extern Vector<std::pair<int,int> > Cshift_table;  | ||||||
|  |  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| // Gather for when there is no need to SIMD split  | // Gather for when there is no need to SIMD split  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| template<class vobj> void  | template<class vobj> void  | ||||||
| Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | Gather_plane_simple (const Lattice<vobj> &rhs,cshiftVector<vobj> &buffer,int dimension,int plane,int cbmask, int off=0) | ||||||
| { | { | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|     cbmask = 0x3; |     cbmask = 0x3; | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   int so=plane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int so=plane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; |   int e1=rhs.Grid()->_slice_nblock[dimension]; | ||||||
|   int e2=rhs._grid->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int ent = 0; |   int ent = 0; | ||||||
|  |  | ||||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|  |   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   int stride=rhs._grid->_slice_stride[dimension]; |  | ||||||
|   if ( cbmask == 0x3 ) {  |   if ( cbmask == 0x3 ) {  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o  = n*stride; | 	int o  = n*stride; | ||||||
| 	int bo = n*e2; | 	int bo = n*e2; | ||||||
| 	table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | 	Cshift_table[ent++] = std::pair<int,int>(off+bo+b,so+o+b); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } else {  |   } else {  | ||||||
| @@ -63,15 +65,27 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | |||||||
|      for(int n=0;n<e1;n++){ |      for(int n=0;n<e1;n++){ | ||||||
|        for(int b=0;b<e2;b++){ |        for(int b=0;b<e2;b++){ | ||||||
| 	 int o  = n*stride; | 	 int o  = n*stride; | ||||||
| 	 int ocb=1<<rhs._grid->CheckerBoardFromOindex(o+b); | 	 int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | ||||||
| 	 if ( ocb &cbmask ) { | 	 if ( ocb &cbmask ) { | ||||||
| 	   table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | 	   Cshift_table[ent++]=std::pair<int,int> (off+bo++,so+o+b); | ||||||
| 	 } | 	 } | ||||||
|        } |        } | ||||||
|      } |      } | ||||||
|   } |   } | ||||||
|   parallel_for(int i=0;i<ent;i++){ |   { | ||||||
|     buffer[table[i].first]=rhs._odata[table[i].second]; |     auto buffer_p = & buffer[0]; | ||||||
|  |     auto table = &Cshift_table[0]; | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  | 	coalescedWrite(buffer_p[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       buffer_p[table[i].first]=rhs_v[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| @@ -79,80 +93,116 @@ Gather_plane_simple (const Lattice<vobj> &rhs,commVector<vobj> &buffer,int dimen | |||||||
| // Gather for when there *is* need to SIMD split  | // Gather for when there *is* need to SIMD split  | ||||||
| /////////////////////////////////////////////////////////////////// | /////////////////////////////////////////////////////////////////// | ||||||
| template<class vobj> void  | template<class vobj> void  | ||||||
| Gather_plane_extract(const Lattice<vobj> &rhs,std::vector<typename vobj::scalar_object *> pointers,int dimension,int plane,int cbmask) | Gather_plane_extract(const Lattice<vobj> &rhs, | ||||||
|  | 		     ExtractPointerArray<typename vobj::scalar_object> pointers, | ||||||
|  | 		     int dimension,int plane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|     cbmask = 0x3; |     cbmask = 0x3; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int so  = plane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int so  = plane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|  |  | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; |   int e1=rhs.Grid()->_slice_nblock[dimension]; | ||||||
|   int e2=rhs._grid->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int n1=rhs._grid->_slice_stride[dimension]; |   int n1=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|   if ( cbmask ==0x3){ |   if ( cbmask ==0x3){ | ||||||
|     parallel_for_nest2(int n=0;n<e1;n++){ | #ifdef ACCELERATOR_CSHIFT     | ||||||
|       for(int b=0;b<e2;b++){ |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for2d(n,e1,b,e2,1,{ | ||||||
| 	int o      =   n*n1; | 	int o      =   n*n1; | ||||||
| 	int offset = b+n*e2; | 	int offset = b+n*e2; | ||||||
| 	 | 	 | ||||||
| 	vobj temp =rhs._odata[so+o+b]; | 	vobj temp =rhs_v[so+o+b]; | ||||||
| 	extract<vobj>(temp,pointers,offset); | 	extract<vobj>(temp,pointers,offset); | ||||||
|  |       }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  | 	int o      =   n*n1; | ||||||
|  | 	int offset = b+n*e2; | ||||||
| 	 | 	 | ||||||
|       } | 	vobj temp =rhs_v[so+o+b]; | ||||||
|     } | 	extract<vobj>(temp,pointers,offset); | ||||||
|  |       }); | ||||||
|  | #endif | ||||||
|   } else {  |   } else {  | ||||||
|  |     Coordinate rdim=rhs.Grid()->_rdimensions; | ||||||
|  |     Coordinate cdm =rhs.Grid()->_checker_dim_mask; | ||||||
|  |     std::cout << " Dense packed buffer WARNING " <<std::endl; // Does this get called twice once for each cb? | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     accelerator_for2d(n,e1,b,e2,1,{ | ||||||
|  |  | ||||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  | 	Coordinate coor; | ||||||
|     // Test_cshift_red_black code. |  | ||||||
|     std::cout << " Dense packed buffer WARNING " <<std::endl; |  | ||||||
|     parallel_for_nest2(int n=0;n<e1;n++){ |  | ||||||
|       for(int b=0;b<e2;b++){ |  | ||||||
|  |  | ||||||
| 	int o=n*n1; | 	int o=n*n1; | ||||||
| 	int ocb=1<<rhs._grid->CheckerBoardFromOindex(o+b); | 	int oindex = o+b; | ||||||
|  |  | ||||||
|  |        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||||
|  |  | ||||||
|  | 	int ocb=1<<cb; | ||||||
| 	int offset = b+n*e2; | 	int offset = b+n*e2; | ||||||
|  |  | ||||||
| 	if ( ocb & cbmask ) { | 	if ( ocb & cbmask ) { | ||||||
| 	  vobj temp =rhs._odata[so+o+b]; | 	  vobj temp =rhs_v[so+o+b]; | ||||||
| 	  extract<vobj>(temp,pointers,offset); | 	  extract<vobj>(temp,pointers,offset); | ||||||
| 	} | 	} | ||||||
|  |       }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  |  | ||||||
|  | 	Coordinate coor; | ||||||
|  |  | ||||||
|  | 	int o=n*n1; | ||||||
|  | 	int oindex = o+b; | ||||||
|  |  | ||||||
|  |        	int cb = RedBlackCheckerBoardFromOindex(oindex, rdim, cdm); | ||||||
|  |  | ||||||
|  | 	int ocb=1<<cb; | ||||||
|  | 	int offset = b+n*e2; | ||||||
|  |  | ||||||
|  | 	if ( ocb & cbmask ) { | ||||||
|  | 	  vobj temp =rhs_v[so+o+b]; | ||||||
|  | 	  extract<vobj>(temp,pointers,offset); | ||||||
| 	} | 	} | ||||||
|     } |       }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // Scatter for when there is no need to SIMD split | // Scatter for when there is no need to SIMD split | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vobj> &buffer, int dimension,int plane,int cbmask) | template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,cshiftVector<vobj> &buffer, int dimension,int plane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|     cbmask=0x3; |     cbmask=0x3; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int so  = plane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int so  = plane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|      |      | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; |   int e1=rhs.Grid()->_slice_nblock[dimension]; | ||||||
|   int e2=rhs._grid->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|   int stride=rhs._grid->_slice_stride[dimension]; |   int stride=rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|  |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); |  | ||||||
|   int ent    =0; |   int ent    =0; | ||||||
|  |  | ||||||
|   if ( cbmask ==0x3 ) { |   if ( cbmask ==0x3 ) { | ||||||
|  |  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o   =n*rhs._grid->_slice_stride[dimension]; | 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| 	int bo  =n*rhs._grid->_slice_block[dimension]; | 	int bo  =n*rhs.Grid()->_slice_block[dimension]; | ||||||
| 	table[ent++] = std::pair<int,int>(so+o+b,bo+b); | 	Cshift_table[ent++] = std::pair<int,int>(so+o+b,bo+b); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  |  | ||||||
| @@ -160,57 +210,81 @@ template<class vobj> void Scatter_plane_simple (Lattice<vobj> &rhs,commVector<vo | |||||||
|     int bo=0; |     int bo=0; | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o   =n*rhs._grid->_slice_stride[dimension]; | 	int o   =n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| 	int ocb=1<<rhs._grid->CheckerBoardFromOindex(o+b);// Could easily be a table lookup | 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b);// Could easily be a table lookup | ||||||
| 	if ( ocb & cbmask ) { | 	if ( ocb & cbmask ) { | ||||||
| 	  table[ent++]=std::pair<int,int> (so+o+b,bo++); | 	  Cshift_table[ent++]=std::pair<int,int> (so+o+b,bo++); | ||||||
| 	} | 	} | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   parallel_for(int i=0;i<ent;i++){ |   { | ||||||
|     rhs._odata[table[i].first]=buffer[table[i].second]; |     auto buffer_p = & buffer[0]; | ||||||
|  |     auto table = &Cshift_table[0]; | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView( rhs_v, rhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  | 	coalescedWrite(rhs_v[table[i].first],coalescedRead(buffer_p[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v, rhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       rhs_v[table[i].first]=buffer_p[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // Scatter for when there *is* need to SIMD split | // Scatter for when there *is* need to SIMD split | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,std::vector<typename vobj::scalar_object *> pointers,int dimension,int plane,int cbmask) | template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,ExtractPointerArray<typename vobj::scalar_object> pointers,int dimension,int plane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|     cbmask=0x3; |     cbmask=0x3; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int so  = plane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int so  = plane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|      |      | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; |   int e1=rhs.Grid()->_slice_nblock[dimension]; | ||||||
|   int e2=rhs._grid->_slice_block[dimension]; |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|  |  | ||||||
|   if(cbmask ==0x3 ) { |   if(cbmask ==0x3 ) { | ||||||
|     parallel_for_nest2(int n=0;n<e1;n++){ |     int _slice_stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|       for(int b=0;b<e2;b++){ |     int _slice_block = rhs.Grid()->_slice_block[dimension]; | ||||||
| 	int o      = n*rhs._grid->_slice_stride[dimension]; | #ifdef ACCELERATOR_CSHIFT     | ||||||
| 	int offset = b+n*rhs._grid->_slice_block[dimension]; |     autoView( rhs_v , rhs, AcceleratorWrite); | ||||||
| 	merge(rhs._odata[so+o+b],pointers,offset); |     accelerator_for2d(n,e1,b,e2,1,{ | ||||||
|       } | 	int o      = n*_slice_stride; | ||||||
|     } | 	int offset = b+n*_slice_block; | ||||||
|  | 	merge(rhs_v[so+o+b],pointers,offset); | ||||||
|  |       }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v , rhs, CpuWrite); | ||||||
|  |     thread_for2d(n,e1,b,e2,{ | ||||||
|  | 	int o      = n*_slice_stride; | ||||||
|  | 	int offset = b+n*_slice_block; | ||||||
|  | 	merge(rhs_v[so+o+b],pointers,offset); | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|   } else {  |   } else {  | ||||||
|  |  | ||||||
|     // Case of SIMD split AND checker dim cannot currently be hit, except in  |     // Case of SIMD split AND checker dim cannot currently be hit, except in  | ||||||
|     // Test_cshift_red_black code. |     // Test_cshift_red_black code. | ||||||
|     //    std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME |     //    std::cout << "Scatter_plane merge assert(0); think this is buggy FIXME "<< std::endl;// think this is buggy FIXME | ||||||
|     std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl; |     std::cout<<" Unthreaded warning -- buffer is not densely packed ??"<<std::endl; | ||||||
|  |     assert(0); // This will fail if hit on GPU | ||||||
|  |     autoView( rhs_v, rhs, CpuWrite); | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int o      = n*rhs._grid->_slice_stride[dimension]; | 	int o      = n*rhs.Grid()->_slice_stride[dimension]; | ||||||
| 	int offset = b+n*rhs._grid->_slice_block[dimension]; | 	int offset = b+n*rhs.Grid()->_slice_block[dimension]; | ||||||
| 	int ocb=1<<rhs._grid->CheckerBoardFromOindex(o+b); | 	int ocb=1<<rhs.Grid()->CheckerBoardFromOindex(o+b); | ||||||
| 	if ( ocb&cbmask ) { | 	if ( ocb&cbmask ) { | ||||||
| 	  merge(rhs._odata[so+o+b],pointers,offset); | 	  merge(rhs_v[so+o+b],pointers,offset); | ||||||
| 	} | 	} | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
| @@ -220,85 +294,112 @@ template<class vobj> void Scatter_plane_merge(Lattice<vobj> &rhs,std::vector<typ | |||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // local to node block strided copies | // local to node block strided copies | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
| template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask) | template<class vobj> void Copy_plane(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask) | ||||||
| { | { | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|     cbmask=0x3; |     cbmask=0x3; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int ro  = rplane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int ro  = rplane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|   int lo  = lplane*lhs._grid->_ostride[dimension]; // base offset for start of plane  |   int lo  = lplane*lhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|  |  | ||||||
|  |   int e1=rhs.Grid()->_slice_nblock[dimension]; // clearly loop invariant for icpc | ||||||
|  |   int e2=rhs.Grid()->_slice_block[dimension]; | ||||||
|  |   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|  |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; // clearly loop invariant for icpc |  | ||||||
|   int e2=rhs._grid->_slice_block[dimension]; |  | ||||||
|   int stride = rhs._grid->_slice_stride[dimension]; |  | ||||||
|   static std::vector<std::pair<int,int> > table; table.resize(e1*e2); |  | ||||||
|   int ent=0; |   int ent=0; | ||||||
|  |  | ||||||
|   if(cbmask == 0x3 ){ |   if(cbmask == 0x3 ){ | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
|         int o =n*stride+b; |         int o =n*stride+b; | ||||||
| 	table[ent++] = std::pair<int,int>(lo+o,ro+o); | 	Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } else {  |   } else {  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
|         int o =n*stride+b; |         int o =n*stride+b; | ||||||
|         int ocb=1<<lhs._grid->CheckerBoardFromOindex(o); |         int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o); | ||||||
|         if ( ocb&cbmask ) { |         if ( ocb&cbmask ) { | ||||||
| 	  table[ent++] = std::pair<int,int>(lo+o,ro+o); | 	  Cshift_table[ent++] = std::pair<int,int>(lo+o,ro+o); | ||||||
| 	} | 	} | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   parallel_for(int i=0;i<ent;i++){ |   { | ||||||
|     lhs._odata[table[i].first]=rhs._odata[table[i].second]; |     auto table = &Cshift_table[0]; | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView(rhs_v , rhs, AcceleratorRead); | ||||||
|  |     autoView(lhs_v , lhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,vobj::Nsimd(),{ | ||||||
|  |       coalescedWrite(lhs_v[table[i].first],coalescedRead(rhs_v[table[i].second])); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView(rhs_v , rhs, CpuRead); | ||||||
|  |     autoView(lhs_v , lhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       lhs_v[table[i].first]=rhs_v[table[i].second]; | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
|  |  | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type) | template<class vobj> void Copy_plane_permute(Lattice<vobj>& lhs,const Lattice<vobj> &rhs, int dimension,int lplane,int rplane,int cbmask,int permute_type) | ||||||
| { | { | ||||||
|  |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   if ( !rhs.Grid()->CheckerBoarded(dimension) ) { | ||||||
|  |  | ||||||
|   if ( !rhs._grid->CheckerBoarded(dimension) ) { |  | ||||||
|     cbmask=0x3; |     cbmask=0x3; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int ro  = rplane*rhs._grid->_ostride[dimension]; // base offset for start of plane  |   int ro  = rplane*rhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|   int lo  = lplane*lhs._grid->_ostride[dimension]; // base offset for start of plane  |   int lo  = lplane*lhs.Grid()->_ostride[dimension]; // base offset for start of plane  | ||||||
|  |  | ||||||
|   int e1=rhs._grid->_slice_nblock[dimension]; |   int e1=rhs.Grid()->_slice_nblock[dimension]; | ||||||
|   int e2=rhs._grid->_slice_block [dimension]; |   int e2=rhs.Grid()->_slice_block [dimension]; | ||||||
|   int stride = rhs._grid->_slice_stride[dimension]; |   int stride = rhs.Grid()->_slice_stride[dimension]; | ||||||
|  |  | ||||||
|  |   if(Cshift_table.size()<e1*e2) Cshift_table.resize(e1*e2); // Let it grow to biggest | ||||||
|  |  | ||||||
|   static std::vector<std::pair<int,int> > table;  table.resize(e1*e2); |  | ||||||
|   int ent=0; |   int ent=0; | ||||||
|  |  | ||||||
|   double t_tab,t_perm; |  | ||||||
|   if ( cbmask == 0x3 ) { |   if ( cbmask == 0x3 ) { | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|     for(int b=0;b<e2;b++){ |     for(int b=0;b<e2;b++){ | ||||||
|       int o  =n*stride; |       int o  =n*stride; | ||||||
|       table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); |       Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||||
|     }} |     }} | ||||||
|   } else { |   } else { | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|     for(int b=0;b<e2;b++){ |     for(int b=0;b<e2;b++){ | ||||||
|       int o  =n*stride; |       int o  =n*stride; | ||||||
|       int ocb=1<<lhs._grid->CheckerBoardFromOindex(o+b); |       int ocb=1<<lhs.Grid()->CheckerBoardFromOindex(o+b); | ||||||
|       if ( ocb&cbmask ) table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); |       if ( ocb&cbmask ) Cshift_table[ent++] = std::pair<int,int>(lo+o+b,ro+o+b); | ||||||
|     }} |     }} | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   parallel_for(int i=0;i<ent;i++){ |   { | ||||||
|     permute(lhs._odata[table[i].first],rhs._odata[table[i].second],permute_type); |     auto table = &Cshift_table[0]; | ||||||
|  | #ifdef ACCELERATOR_CSHIFT     | ||||||
|  |     autoView( rhs_v, rhs, AcceleratorRead); | ||||||
|  |     autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|  |     accelerator_for(i,ent,1,{ | ||||||
|  |       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||||
|  |     }); | ||||||
|  | #else | ||||||
|  |     autoView( rhs_v, rhs, CpuRead); | ||||||
|  |     autoView( lhs_v, lhs, CpuWrite); | ||||||
|  |     thread_for(i,ent,{ | ||||||
|  |       permute(lhs_v[table[i].first],rhs_v[table[i].second],permute_type); | ||||||
|  |     }); | ||||||
|  | #endif | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| @@ -309,10 +410,8 @@ template<class vobj> void Cshift_local(Lattice<vobj>& ret,const Lattice<vobj> &r | |||||||
| { | { | ||||||
|   int sshift[2]; |   int sshift[2]; | ||||||
|  |  | ||||||
|   sshift[0] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Even); |   sshift[0] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Even); | ||||||
|   sshift[1] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Odd); |   sshift[1] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Odd); | ||||||
|  |  | ||||||
|   double t_local; |  | ||||||
|  |  | ||||||
|   if ( sshift[0] == sshift[1] ) { |   if ( sshift[0] == sshift[1] ) { | ||||||
|     Cshift_local(ret,rhs,dimension,shift,0x3); |     Cshift_local(ret,rhs,dimension,shift,0x3); | ||||||
| @@ -324,7 +423,7 @@ template<class vobj> void Cshift_local(Lattice<vobj>& ret,const Lattice<vobj> &r | |||||||
|  |  | ||||||
| template<class vobj> void Cshift_local(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | template<class vobj> void Cshift_local(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
| { | { | ||||||
|   GridBase *grid = rhs._grid; |   GridBase *grid = rhs.Grid(); | ||||||
|   int fd = grid->_fdimensions[dimension]; |   int fd = grid->_fdimensions[dimension]; | ||||||
|   int rd = grid->_rdimensions[dimension]; |   int rd = grid->_rdimensions[dimension]; | ||||||
|   int ld = grid->_ldimensions[dimension]; |   int ld = grid->_ldimensions[dimension]; | ||||||
| @@ -335,18 +434,18 @@ template<class vobj> void Cshift_local(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|   shift = (shift+fd)%fd; |   shift = (shift+fd)%fd; | ||||||
|  |  | ||||||
|   // the permute type |   // the permute type | ||||||
|   ret.checkerboard = grid->CheckerBoardDestination(rhs.checkerboard,shift,dimension); |   ret.Checkerboard() = grid->CheckerBoardDestination(rhs.Checkerboard(),shift,dimension); | ||||||
|   int permute_dim =grid->PermuteDim(dimension); |   int permute_dim =grid->PermuteDim(dimension); | ||||||
|   int permute_type=grid->PermuteType(dimension); |   int permute_type=grid->PermuteType(dimension); | ||||||
|   int permute_type_dist; |   int permute_type_dist; | ||||||
|  |  | ||||||
|   for(int x=0;x<rd;x++){        |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
|     int o   = 0; |     //    int o   = 0; | ||||||
|     int bo  = x * grid->_ostride[dimension]; |     int bo  = x * grid->_ostride[dimension]; | ||||||
|     int cb= (cbmask==0x2)? Odd : Even; |     int cb= (cbmask==0x2)? Odd : Even; | ||||||
|  |  | ||||||
|     int sshift = grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,cb); |     int sshift = grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|     int sx     = (x+sshift)%rd; |     int sx     = (x+sshift)%rd; | ||||||
|      |      | ||||||
|     // wrap is whether sshift > rd. |     // wrap is whether sshift > rd. | ||||||
| @@ -387,5 +486,5 @@ template<class vobj> void Cshift_local(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|    |    | ||||||
|   } |   } | ||||||
| } | } | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif |  | ||||||
|   | |||||||
| @@ -30,27 +30,27 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
| #define _GRID_CSHIFT_MPI_H_ | #define _GRID_CSHIFT_MPI_H_ | ||||||
|  |  | ||||||
|  |  | ||||||
| namespace Grid {  | NAMESPACE_BEGIN(Grid);  | ||||||
|  |  | ||||||
| template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension,int shift) | template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension,int shift) | ||||||
| { | { | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |  | ||||||
|   Lattice<vobj> ret(rhs._grid);  |   Lattice<vobj> ret(rhs.Grid());  | ||||||
|    |    | ||||||
|   int fd = rhs._grid->_fdimensions[dimension]; |   int fd = rhs.Grid()->_fdimensions[dimension]; | ||||||
|   int rd = rhs._grid->_rdimensions[dimension]; |   int rd = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |  | ||||||
|   // Map to always positive shift modulo global full dimension. |   // Map to always positive shift modulo global full dimension. | ||||||
|   shift = (shift+fd)%fd; |   shift = (shift+fd)%fd; | ||||||
|  |  | ||||||
|   ret.checkerboard = rhs._grid->CheckerBoardDestination(rhs.checkerboard,shift,dimension); |   ret.Checkerboard() = rhs.Grid()->CheckerBoardDestination(rhs.Checkerboard(),shift,dimension); | ||||||
|          |          | ||||||
|   // the permute type |   // the permute type | ||||||
|   int simd_layout     = rhs._grid->_simd_layout[dimension]; |   int simd_layout     = rhs.Grid()->_simd_layout[dimension]; | ||||||
|   int comm_dim        = rhs._grid->_processors[dimension] >1 ; |   int comm_dim        = rhs.Grid()->_processors[dimension] >1 ; | ||||||
|   int splice_dim      = rhs._grid->_simd_layout[dimension]>1 && (comm_dim); |   int splice_dim      = rhs.Grid()->_simd_layout[dimension]>1 && (comm_dim); | ||||||
|  |  | ||||||
|  |  | ||||||
|   if ( !comm_dim ) { |   if ( !comm_dim ) { | ||||||
| @@ -70,10 +70,10 @@ template<class vobj> void Cshift_comms(Lattice<vobj>& ret,const Lattice<vobj> &r | |||||||
| { | { | ||||||
|   int sshift[2]; |   int sshift[2]; | ||||||
|  |  | ||||||
|   sshift[0] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Even); |   sshift[0] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Even); | ||||||
|   sshift[1] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Odd); |   sshift[1] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Odd); | ||||||
|  |  | ||||||
|   //  std::cout << "Cshift_comms dim "<<dimension<<"cb "<<rhs.checkerboard<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl; |   //  std::cout << "Cshift_comms dim "<<dimension<<"cb "<<rhs.Checkerboard()<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl; | ||||||
|   if ( sshift[0] == sshift[1] ) { |   if ( sshift[0] == sshift[1] ) { | ||||||
|     //    std::cout << "Single pass Cshift_comms" <<std::endl; |     //    std::cout << "Single pass Cshift_comms" <<std::endl; | ||||||
|     Cshift_comms(ret,rhs,dimension,shift,0x3); |     Cshift_comms(ret,rhs,dimension,shift,0x3); | ||||||
| @@ -88,8 +88,8 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob | |||||||
| { | { | ||||||
|   int sshift[2]; |   int sshift[2]; | ||||||
|  |  | ||||||
|   sshift[0] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Even); |   sshift[0] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Even); | ||||||
|   sshift[1] = rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,Odd); |   sshift[1] = rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,Odd); | ||||||
|  |  | ||||||
|   //std::cout << "Cshift_comms_simd dim "<<dimension<<"cb "<<rhs.checkerboard<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl; |   //std::cout << "Cshift_comms_simd dim "<<dimension<<"cb "<<rhs.checkerboard<<"shift "<<shift<<" sshift " << sshift[0]<<" "<<sshift[1]<<std::endl; | ||||||
|   if ( sshift[0] == sshift[1] ) { |   if ( sshift[0] == sshift[1] ) { | ||||||
| @@ -101,31 +101,32 @@ template<class vobj> void Cshift_comms_simd(Lattice<vobj>& ret,const Lattice<vob | |||||||
|     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration |     Cshift_comms_simd(ret,rhs,dimension,shift,0x2);// both with block stride loop iteration | ||||||
|   } |   } | ||||||
| } | } | ||||||
|  | #define ACCELERATOR_CSHIFT_NO_COPY | ||||||
|  | #ifdef ACCELERATOR_CSHIFT_NO_COPY | ||||||
| template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
| { | { | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |  | ||||||
|   GridBase *grid=rhs._grid; |   GridBase *grid=rhs.Grid(); | ||||||
|   Lattice<vobj> temp(rhs._grid); |   Lattice<vobj> temp(rhs.Grid()); | ||||||
|  |  | ||||||
|   int fd              = rhs._grid->_fdimensions[dimension]; |   int fd              = rhs.Grid()->_fdimensions[dimension]; | ||||||
|   int rd              = rhs._grid->_rdimensions[dimension]; |   int rd              = rhs.Grid()->_rdimensions[dimension]; | ||||||
|   int pd              = rhs._grid->_processors[dimension]; |   int pd              = rhs.Grid()->_processors[dimension]; | ||||||
|   int simd_layout     = rhs._grid->_simd_layout[dimension]; |   int simd_layout     = rhs.Grid()->_simd_layout[dimension]; | ||||||
|   int comm_dim        = rhs._grid->_processors[dimension] >1 ; |   int comm_dim        = rhs.Grid()->_processors[dimension] >1 ; | ||||||
|   assert(simd_layout==1); |   assert(simd_layout==1); | ||||||
|   assert(comm_dim==1); |   assert(comm_dim==1); | ||||||
|   assert(shift>=0); |   assert(shift>=0); | ||||||
|   assert(shift<fd); |   assert(shift<fd); | ||||||
|    |    | ||||||
|   int buffer_size = rhs._grid->_slice_nblock[dimension]*rhs._grid->_slice_block[dimension]; |   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||||
|   commVector<vobj> send_buf(buffer_size); |   cshiftVector<vobj> send_buf(buffer_size); | ||||||
|   commVector<vobj> recv_buf(buffer_size); |   cshiftVector<vobj> recv_buf(buffer_size); | ||||||
|      |      | ||||||
|   int cb= (cbmask==0x2)? Odd : Even; |   int cb= (cbmask==0x2)? Odd : Even; | ||||||
|   int sshift= rhs._grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,cb); |   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|   for(int x=0;x<rd;x++){        |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
| @@ -138,24 +139,26 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|  |  | ||||||
|     } else { |     } else { | ||||||
|  |  | ||||||
|       int words = send_buf.size(); |       int words = buffer_size; | ||||||
|       if (cbmask != 0x3) words=words>>1; |       if (cbmask != 0x3) words=words>>1; | ||||||
|  |  | ||||||
|       int bytes = words * sizeof(vobj); |       int bytes = words * sizeof(vobj); | ||||||
|  |  | ||||||
|       Gather_plane_simple (rhs,send_buf,dimension,sx,cbmask); |       Gather_plane_simple (rhs,send_buf,dimension,sx,cbmask); | ||||||
|  |  | ||||||
|       int rank           = grid->_processor; |       //      int rank           = grid->_processor; | ||||||
|       int recv_from_rank; |       int recv_from_rank; | ||||||
|       int xmit_to_rank; |       int xmit_to_rank; | ||||||
|       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); |       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|       grid->SendToRecvFrom((void *)&send_buf[0], |       grid->SendToRecvFrom((void *)&send_buf[0], | ||||||
| 			   xmit_to_rank, | 			   xmit_to_rank, | ||||||
| 			   (void *)&recv_buf[0], | 			   (void *)&recv_buf[0], | ||||||
| 			   recv_from_rank, | 			   recv_from_rank, | ||||||
| 			   bytes); | 			   bytes); | ||||||
|  |  | ||||||
|       grid->Barrier(); |       grid->Barrier(); | ||||||
|  |  | ||||||
|       Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask); |       Scatter_plane_simple (ret,recv_buf,dimension,x,cbmask); | ||||||
| @@ -165,7 +168,7 @@ template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &r | |||||||
|  |  | ||||||
| template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
| { | { | ||||||
|   GridBase *grid=rhs._grid; |   GridBase *grid=rhs.Grid(); | ||||||
|   const int Nsimd = grid->Nsimd(); |   const int Nsimd = grid->Nsimd(); | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|   typedef typename vobj::scalar_object scalar_object; |   typedef typename vobj::scalar_object scalar_object; | ||||||
| @@ -193,21 +196,28 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|   // Simd direction uses an extract/merge pair |   // Simd direction uses an extract/merge pair | ||||||
|   /////////////////////////////////////////////// |   /////////////////////////////////////////////// | ||||||
|   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; |   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||||
|   int words = sizeof(vobj)/sizeof(vector_type); |   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||||
|  |  | ||||||
|   std::vector<commVector<scalar_object> >   send_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); |   std::vector<cshiftVector<scalar_object> >  send_buf_extract(Nsimd); | ||||||
|   std::vector<commVector<scalar_object> >   recv_buf_extract(Nsimd,commVector<scalar_object>(buffer_size) ); |   std::vector<cshiftVector<scalar_object> >  recv_buf_extract(Nsimd); | ||||||
|  |   scalar_object *  recv_buf_extract_mpi; | ||||||
|  |   scalar_object *  send_buf_extract_mpi; | ||||||
|  |   | ||||||
|  |   for(int s=0;s<Nsimd;s++){ | ||||||
|  |     send_buf_extract[s].resize(buffer_size); | ||||||
|  |     recv_buf_extract[s].resize(buffer_size); | ||||||
|  |   } | ||||||
|  |  | ||||||
|   int bytes = buffer_size*sizeof(scalar_object); |   int bytes = buffer_size*sizeof(scalar_object); | ||||||
|  |  | ||||||
|   std::vector<scalar_object *>  pointers(Nsimd); //  |   ExtractPointerArray<scalar_object>  pointers(Nsimd); //  | ||||||
|   std::vector<scalar_object *> rpointers(Nsimd); // received pointers |   ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers | ||||||
|  |  | ||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   // Work out what to send where |   // Work out what to send where | ||||||
|   /////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   int cb    = (cbmask==0x2)? Odd : Even; |   int cb    = (cbmask==0x2)? Odd : Even; | ||||||
|   int sshift= grid->CheckerBoardShiftForCB(rhs.checkerboard,dimension,shift,cb); |   int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|   // loop over outer coord planes orthog to dim |   // loop over outer coord planes orthog to dim | ||||||
|   for(int x=0;x<rd;x++){        |   for(int x=0;x<rd;x++){        | ||||||
| @@ -242,11 +252,204 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|       if(nbr_proc){ |       if(nbr_proc){ | ||||||
| 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||||
|  |  | ||||||
| 	grid->SendToRecvFrom((void *)&send_buf_extract[nbr_lane][0], | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	send_buf_extract_mpi = &send_buf_extract[nbr_lane][0]; | ||||||
|  | 	recv_buf_extract_mpi = &recv_buf_extract[i][0]; | ||||||
|  | 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||||
| 			     xmit_to_rank, | 			     xmit_to_rank, | ||||||
| 			     (void *)&recv_buf_extract[i][0], | 			     (void *)recv_buf_extract_mpi, | ||||||
| 			     recv_from_rank, | 			     recv_from_rank, | ||||||
| 			     bytes); | 			     bytes); | ||||||
|  |  | ||||||
|  | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	rpointers[i] = &recv_buf_extract[i][0]; | ||||||
|  |       } else {  | ||||||
|  | 	rpointers[i] = &send_buf_extract[nbr_lane][0]; | ||||||
|  |       } | ||||||
|  |  | ||||||
|  |     } | ||||||
|  |     Scatter_plane_merge(ret,rpointers,dimension,x,cbmask); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | } | ||||||
|  | #else  | ||||||
|  | template<class vobj> void Cshift_comms(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |  | ||||||
|  |   GridBase *grid=rhs.Grid(); | ||||||
|  |   Lattice<vobj> temp(rhs.Grid()); | ||||||
|  |  | ||||||
|  |   int fd              = rhs.Grid()->_fdimensions[dimension]; | ||||||
|  |   int rd              = rhs.Grid()->_rdimensions[dimension]; | ||||||
|  |   int pd              = rhs.Grid()->_processors[dimension]; | ||||||
|  |   int simd_layout     = rhs.Grid()->_simd_layout[dimension]; | ||||||
|  |   int comm_dim        = rhs.Grid()->_processors[dimension] >1 ; | ||||||
|  |   assert(simd_layout==1); | ||||||
|  |   assert(comm_dim==1); | ||||||
|  |   assert(shift>=0); | ||||||
|  |   assert(shift<fd); | ||||||
|  |    | ||||||
|  |   int buffer_size = rhs.Grid()->_slice_nblock[dimension]*rhs.Grid()->_slice_block[dimension]; | ||||||
|  |   cshiftVector<vobj> send_buf_v(buffer_size); | ||||||
|  |   cshiftVector<vobj> recv_buf_v(buffer_size); | ||||||
|  |   vobj *send_buf; | ||||||
|  |   vobj *recv_buf; | ||||||
|  |   { | ||||||
|  |     grid->ShmBufferFreeAll(); | ||||||
|  |     size_t bytes = buffer_size*sizeof(vobj); | ||||||
|  |     send_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||||
|  |     recv_buf=(vobj *)grid->ShmBufferMalloc(bytes); | ||||||
|  |   } | ||||||
|  |      | ||||||
|  |   int cb= (cbmask==0x2)? Odd : Even; | ||||||
|  |   int sshift= rhs.Grid()->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|  |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
|  |     int sx        =  (x+sshift)%rd; | ||||||
|  |     int comm_proc = ((x+sshift)/rd)%pd; | ||||||
|  |      | ||||||
|  |     if (comm_proc==0) { | ||||||
|  |  | ||||||
|  |       Copy_plane(ret,rhs,dimension,x,sx,cbmask);  | ||||||
|  |  | ||||||
|  |     } else { | ||||||
|  |  | ||||||
|  |       int words = buffer_size; | ||||||
|  |       if (cbmask != 0x3) words=words>>1; | ||||||
|  |  | ||||||
|  |       int bytes = words * sizeof(vobj); | ||||||
|  |  | ||||||
|  |       Gather_plane_simple (rhs,send_buf_v,dimension,sx,cbmask); | ||||||
|  |  | ||||||
|  |       //      int rank           = grid->_processor; | ||||||
|  |       int recv_from_rank; | ||||||
|  |       int xmit_to_rank; | ||||||
|  |       grid->ShiftedRanks(dimension,comm_proc,xmit_to_rank,recv_from_rank); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|  |       acceleratorCopyDeviceToDevice((void *)&send_buf_v[0],(void *)&send_buf[0],bytes); | ||||||
|  |       grid->SendToRecvFrom((void *)&send_buf[0], | ||||||
|  | 			   xmit_to_rank, | ||||||
|  | 			   (void *)&recv_buf[0], | ||||||
|  | 			   recv_from_rank, | ||||||
|  | 			   bytes); | ||||||
|  |       acceleratorCopyDeviceToDevice((void *)&recv_buf[0],(void *)&recv_buf_v[0],bytes); | ||||||
|  |  | ||||||
|  |       grid->Barrier(); | ||||||
|  |  | ||||||
|  |       Scatter_plane_simple (ret,recv_buf_v,dimension,x,cbmask); | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vobj> &rhs,int dimension,int shift,int cbmask) | ||||||
|  | { | ||||||
|  |   GridBase *grid=rhs.Grid(); | ||||||
|  |   const int Nsimd = grid->Nsimd(); | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |   typedef typename vobj::scalar_object scalar_object; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |     | ||||||
|  |   int fd = grid->_fdimensions[dimension]; | ||||||
|  |   int rd = grid->_rdimensions[dimension]; | ||||||
|  |   int ld = grid->_ldimensions[dimension]; | ||||||
|  |   int pd = grid->_processors[dimension]; | ||||||
|  |   int simd_layout     = grid->_simd_layout[dimension]; | ||||||
|  |   int comm_dim        = grid->_processors[dimension] >1 ; | ||||||
|  |  | ||||||
|  |   //std::cout << "Cshift_comms_simd dim "<< dimension << " fd "<<fd<<" rd "<<rd | ||||||
|  |   //    << " ld "<<ld<<" pd " << pd<<" simd_layout "<<simd_layout  | ||||||
|  |   //    << " comm_dim " << comm_dim << " cbmask " << cbmask <<std::endl; | ||||||
|  |  | ||||||
|  |   assert(comm_dim==1); | ||||||
|  |   assert(simd_layout==2); | ||||||
|  |   assert(shift>=0); | ||||||
|  |   assert(shift<fd); | ||||||
|  |  | ||||||
|  |   int permute_type=grid->PermuteType(dimension); | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////////// | ||||||
|  |   // Simd direction uses an extract/merge pair | ||||||
|  |   /////////////////////////////////////////////// | ||||||
|  |   int buffer_size = grid->_slice_nblock[dimension]*grid->_slice_block[dimension]; | ||||||
|  |   //  int words = sizeof(vobj)/sizeof(vector_type); | ||||||
|  |  | ||||||
|  |   std::vector<cshiftVector<scalar_object> >  send_buf_extract(Nsimd); | ||||||
|  |   std::vector<cshiftVector<scalar_object> >  recv_buf_extract(Nsimd); | ||||||
|  |   scalar_object *  recv_buf_extract_mpi; | ||||||
|  |   scalar_object *  send_buf_extract_mpi; | ||||||
|  |   { | ||||||
|  |     size_t bytes = sizeof(scalar_object)*buffer_size; | ||||||
|  |     grid->ShmBufferFreeAll(); | ||||||
|  |     send_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||||
|  |     recv_buf_extract_mpi = (scalar_object *)grid->ShmBufferMalloc(bytes); | ||||||
|  |   } | ||||||
|  |   for(int s=0;s<Nsimd;s++){ | ||||||
|  |     send_buf_extract[s].resize(buffer_size); | ||||||
|  |     recv_buf_extract[s].resize(buffer_size); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   int bytes = buffer_size*sizeof(scalar_object); | ||||||
|  |  | ||||||
|  |   ExtractPointerArray<scalar_object>  pointers(Nsimd); //  | ||||||
|  |   ExtractPointerArray<scalar_object> rpointers(Nsimd); // received pointers | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // Work out what to send where | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   int cb    = (cbmask==0x2)? Odd : Even; | ||||||
|  |   int sshift= grid->CheckerBoardShiftForCB(rhs.Checkerboard(),dimension,shift,cb); | ||||||
|  |  | ||||||
|  |   // loop over outer coord planes orthog to dim | ||||||
|  |   for(int x=0;x<rd;x++){        | ||||||
|  |  | ||||||
|  |     // FIXME call local permute copy if none are offnode. | ||||||
|  |     for(int i=0;i<Nsimd;i++){        | ||||||
|  |       pointers[i] = &send_buf_extract[i][0]; | ||||||
|  |     } | ||||||
|  |     int sx   = (x+sshift)%rd; | ||||||
|  |     Gather_plane_extract(rhs,pointers,dimension,sx,cbmask); | ||||||
|  |  | ||||||
|  |     for(int i=0;i<Nsimd;i++){ | ||||||
|  |        | ||||||
|  |       int inner_bit = (Nsimd>>(permute_type+1)); | ||||||
|  |       int ic= (i&inner_bit)? 1:0; | ||||||
|  |  | ||||||
|  |       int my_coor          = rd*ic + x; | ||||||
|  |       int nbr_coor         = my_coor+sshift; | ||||||
|  |       int nbr_proc = ((nbr_coor)/ld) % pd;// relative shift in processors | ||||||
|  |  | ||||||
|  |       int nbr_ic   = (nbr_coor%ld)/rd;    // inner coord of peer | ||||||
|  |       int nbr_ox   = (nbr_coor%rd);       // outer coord of peer | ||||||
|  |       int nbr_lane = (i&(~inner_bit)); | ||||||
|  |  | ||||||
|  |       int recv_from_rank; | ||||||
|  |       int xmit_to_rank; | ||||||
|  |  | ||||||
|  |       if (nbr_ic) nbr_lane|=inner_bit; | ||||||
|  |  | ||||||
|  |       assert (sx == nbr_ox); | ||||||
|  |  | ||||||
|  |       if(nbr_proc){ | ||||||
|  | 	grid->ShiftedRanks(dimension,nbr_proc,xmit_to_rank,recv_from_rank);  | ||||||
|  |  | ||||||
|  | 	grid->Barrier(); | ||||||
|  |  | ||||||
|  | 	acceleratorCopyDeviceToDevice((void *)&send_buf_extract[nbr_lane][0],(void *)send_buf_extract_mpi,bytes); | ||||||
|  | 	grid->SendToRecvFrom((void *)send_buf_extract_mpi, | ||||||
|  | 			     xmit_to_rank, | ||||||
|  | 			     (void *)recv_buf_extract_mpi, | ||||||
|  | 			     recv_from_rank, | ||||||
|  | 			     bytes); | ||||||
|  | 	acceleratorCopyDeviceToDevice((void *)recv_buf_extract_mpi,(void *)&recv_buf_extract[i][0],bytes); | ||||||
|  |  | ||||||
| 	grid->Barrier(); | 	grid->Barrier(); | ||||||
| 	rpointers[i] = &recv_buf_extract[i][0]; | 	rpointers[i] = &recv_buf_extract[i][0]; | ||||||
|       } else {  |       } else {  | ||||||
| @@ -258,5 +461,7 @@ template<class vobj> void  Cshift_comms_simd(Lattice<vobj> &ret,const Lattice<vo | |||||||
|   } |   } | ||||||
|  |  | ||||||
| } | } | ||||||
| } | #endif | ||||||
|  | NAMESPACE_END(Grid);  | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -27,13 +27,14 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef _GRID_CSHIFT_NONE_H_ | #ifndef _GRID_CSHIFT_NONE_H_ | ||||||
| #define _GRID_CSHIFT_NONE_H_ | #define _GRID_CSHIFT_NONE_H_ | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
| template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension,int shift) | template<class vobj> Lattice<vobj> Cshift(const Lattice<vobj> &rhs,int dimension,int shift) | ||||||
| { | { | ||||||
|   Lattice<vobj> ret(rhs._grid); |   Lattice<vobj> ret(rhs.Grid()); | ||||||
|   ret.checkerboard = rhs._grid->CheckerBoardDestination(rhs.checkerboard,shift,dimension); |   ret.Checkerboard() = rhs.Grid()->CheckerBoardDestination(rhs.Checkerboard(),shift,dimension); | ||||||
|   Cshift_local(ret,rhs,dimension,shift); |   Cshift_local(ret,rhs,dimension,shift); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/cshift/Cshift_table.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | |||||||
|  | #include <Grid/GridCore.h>        | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  | Vector<std::pair<int,int> > Cshift_table;  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -1,3 +1,4 @@ | |||||||
|  | #ifndef __NVCC__ | ||||||
| /* | /* | ||||||
|     __ _____ _____ _____ |     __ _____ _____ _____ | ||||||
|  __|  |   __|     |   | |  JSON for Modern C++ |  __|  |   __|     |   | |  JSON for Modern C++ | ||||||
| @@ -18918,3 +18919,4 @@ inline nlohmann::json::json_pointer operator "" _json_pointer(const char* s, std | |||||||
|  |  | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|  | #endif | ||||||
|   | |||||||
| @@ -25,9 +25,24 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #ifndef GRID_LATTICE_H | #pragma once | ||||||
| #define GRID_LATTICE_H | #include <Grid/lattice/Lattice_view.h> | ||||||
|  |  | ||||||
| #include <Grid/lattice/Lattice_base.h> | #include <Grid/lattice/Lattice_base.h> | ||||||
|  | #include <Grid/lattice/Lattice_conformable.h> | ||||||
| #endif | #include <Grid/lattice/Lattice_ET.h> | ||||||
|  | #include <Grid/lattice/Lattice_arith.h> | ||||||
|  | #include <Grid/lattice/Lattice_trace.h> | ||||||
|  | #include <Grid/lattice/Lattice_transpose.h> | ||||||
|  | #include <Grid/lattice/Lattice_local.h> | ||||||
|  | #include <Grid/lattice/Lattice_reduction.h> | ||||||
|  | #include <Grid/lattice/Lattice_peekpoke.h> | ||||||
|  | #include <Grid/lattice/Lattice_reality.h> | ||||||
|  | #include <Grid/lattice/Lattice_real_imag.h> | ||||||
|  | #include <Grid/lattice/Lattice_comparison_utils.h> | ||||||
|  | #include <Grid/lattice/Lattice_comparison.h> | ||||||
|  | #include <Grid/lattice/Lattice_coordinate.h> | ||||||
|  | //#include <Grid/lattice/Lattice_where.h> | ||||||
|  | #include <Grid/lattice/Lattice_rng.h> | ||||||
|  | #include <Grid/lattice/Lattice_unary.h> | ||||||
|  | #include <Grid/lattice/Lattice_transfer.h> | ||||||
|  | #include <Grid/lattice/Lattice_basis.h> | ||||||
|   | |||||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: neo <cossu@post.kek.jp> | Author: neo <cossu@post.kek.jp> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de | ||||||
|  |  | ||||||
| This program is free software; you can redistribute it and/or modify | This program is free software; you can redistribute it and/or modify | ||||||
| it under the terms of the GNU General Public License as published by | it under the terms of the GNU General Public License as published by | ||||||
| @@ -36,14 +37,29 @@ directory | |||||||
| #include <typeinfo> | #include <typeinfo> | ||||||
| #include <vector> | #include <vector> | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
| // Predicated where support | // Predicated where support | ||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
|  | #ifdef GRID_SIMT | ||||||
|  | // drop to scalar in SIMT; cleaner in fact | ||||||
| template <class iobj, class vobj, class robj> | template <class iobj, class vobj, class robj> | ||||||
| inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, | accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||||
|                             const robj &iffalse) { | 					const vobj &iftrue,  | ||||||
|  | 					const robj &iffalse)  | ||||||
|  | { | ||||||
|  |   Integer mask = TensorRemove(predicate); | ||||||
|  |   typename std::remove_const<vobj>::type ret= iffalse; | ||||||
|  |   if (mask) ret=iftrue; | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  | #else | ||||||
|  | template <class iobj, class vobj, class robj> | ||||||
|  | accelerator_inline vobj predicatedWhere(const iobj &predicate,  | ||||||
|  | 					const vobj &iftrue,  | ||||||
|  | 					const robj &iffalse)  | ||||||
|  | { | ||||||
|   typename std::remove_const<vobj>::type ret; |   typename std::remove_const<vobj>::type ret; | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_object scalar_object; |   typedef typename vobj::scalar_object scalar_object; | ||||||
| @@ -51,11 +67,10 @@ inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, | |||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   const int Nsimd = vobj::vector_type::Nsimd(); |   const int Nsimd = vobj::vector_type::Nsimd(); | ||||||
|   const int words = sizeof(vobj) / sizeof(vector_type); |  | ||||||
|  |  | ||||||
|   std::vector<Integer> mask(Nsimd); |   ExtractBuffer<Integer> mask(Nsimd); | ||||||
|   std::vector<scalar_object> truevals(Nsimd); |   ExtractBuffer<scalar_object> truevals(Nsimd); | ||||||
|   std::vector<scalar_object> falsevals(Nsimd); |   ExtractBuffer<scalar_object> falsevals(Nsimd); | ||||||
|  |  | ||||||
|   extract(iftrue, truevals); |   extract(iftrue, truevals); | ||||||
|   extract(iffalse, falsevals); |   extract(iffalse, falsevals); | ||||||
| @@ -68,178 +83,273 @@ inline vobj predicatedWhere(const iobj &predicate, const vobj &iftrue, | |||||||
|   merge(ret, falsevals); |   merge(ret, falsevals); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|  | #endif | ||||||
|  |  | ||||||
| //////////////////////////////////////////// | ///////////////////////////////////////////////////// | ||||||
| // recursive evaluation of expressions; Could |  | ||||||
| // switch to generic approach with variadics, a la |  | ||||||
| // Antonin's Lat Sim but the repack to variadic with popped |  | ||||||
| // from tuple is hideous; C++14 introduces std::make_index_sequence for this |  | ||||||
| //////////////////////////////////////////// |  | ||||||
|  |  | ||||||
| // leaf eval of lattice ; should enable if protect using traits |  | ||||||
|  |  | ||||||
| template <typename T> |  | ||||||
| using is_lattice = std::is_base_of<LatticeBase, T>; |  | ||||||
|  |  | ||||||
| template <typename T> |  | ||||||
| using is_lattice_expr = std::is_base_of<LatticeExpressionBase, T>; |  | ||||||
|  |  | ||||||
| template <typename T> using is_lattice_expr = std::is_base_of<LatticeExpressionBase,T >; |  | ||||||
|  |  | ||||||
| //Specialization of getVectorType for lattices | //Specialization of getVectorType for lattices | ||||||
|  | ///////////////////////////////////////////////////// | ||||||
| template<typename T> | template<typename T> | ||||||
| struct getVectorType<Lattice<T> >{ | struct getVectorType<Lattice<T> >{ | ||||||
|   typedef typename Lattice<T>::vector_object type; |   typedef typename Lattice<T>::vector_object type; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class sobj> | //////////////////////////////////////////// | ||||||
| inline sobj eval(const unsigned int ss, const sobj &arg) | //--  recursive evaluation of expressions; -- | ||||||
|  | // handle leaves of syntax tree | ||||||
|  | /////////////////////////////////////////////////// | ||||||
|  | template<class sobj, | ||||||
|  |   typename std::enable_if<!is_lattice<sobj>::value&&!is_lattice_expr<sobj>::value,sobj>::type * = nullptr>  | ||||||
|  | accelerator_inline  | ||||||
|  | sobj eval(const uint64_t ss, const sobj &arg) | ||||||
| { | { | ||||||
|   return arg; |   return arg; | ||||||
| } | } | ||||||
| template <class lobj> | template <class lobj> accelerator_inline  | ||||||
| inline const lobj &eval(const unsigned int ss, const Lattice<lobj> &arg) { | auto eval(const uint64_t ss, const LatticeView<lobj> &arg) -> decltype(arg(ss)) | ||||||
|   return arg._odata[ss]; | { | ||||||
|  |   return arg(ss); | ||||||
| } | } | ||||||
|  |  | ||||||
| // handle nodes in syntax tree | //////////////////////////////////////////// | ||||||
| template <typename Op, typename T1> | //--  recursive evaluation of expressions; -- | ||||||
| auto inline eval( | // whole vector return, used only for expression return type inference | ||||||
|     const unsigned int ss, | /////////////////////////////////////////////////// | ||||||
|     const LatticeUnaryExpression<Op, T1> &expr)  // eval one operand | template<class sobj> accelerator_inline  | ||||||
|     -> decltype(expr.first.func(eval(ss, std::get<0>(expr.second)))) { | sobj vecEval(const uint64_t ss, const sobj &arg) | ||||||
|   return expr.first.func(eval(ss, std::get<0>(expr.second))); | { | ||||||
|  |   return arg; | ||||||
|  | } | ||||||
|  | template <class lobj> accelerator_inline  | ||||||
|  | const lobj & vecEval(const uint64_t ss, const LatticeView<lobj> &arg)  | ||||||
|  | { | ||||||
|  |   return arg[ss]; | ||||||
| } | } | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2> | /////////////////////////////////////////////////// | ||||||
| auto inline eval( | // handle nodes in syntax tree- eval one operand | ||||||
|     const unsigned int ss, | // vecEval needed (but never called as all expressions offloaded) to infer the return type | ||||||
|     const LatticeBinaryExpression<Op, T1, T2> &expr)  // eval two operands | // in SIMT contexts of closure. | ||||||
|     -> decltype(expr.first.func(eval(ss, std::get<0>(expr.second)), | /////////////////////////////////////////////////// | ||||||
|                                 eval(ss, std::get<1>(expr.second)))) { | template <typename Op, typename T1> accelerator_inline  | ||||||
|   return expr.first.func(eval(ss, std::get<0>(expr.second)), | auto vecEval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||||
|                          eval(ss, std::get<1>(expr.second))); |   -> decltype(expr.op.func( vecEval(ss, expr.arg1))) | ||||||
|  | { | ||||||
|  |   return expr.op.func( vecEval(ss, expr.arg1) ); | ||||||
|  | } | ||||||
|  | // vecEval two operands | ||||||
|  | template <typename Op, typename T1, typename T2> accelerator_inline | ||||||
|  | auto vecEval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||||
|  |   -> decltype(expr.op.func( vecEval(ss,expr.arg1),vecEval(ss,expr.arg2))) | ||||||
|  | { | ||||||
|  |   return expr.op.func( vecEval(ss,expr.arg1), vecEval(ss,expr.arg2) ); | ||||||
|  | } | ||||||
|  | // vecEval three operands | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||||
|  | auto vecEval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||||
|  |   -> decltype(expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3))) | ||||||
|  | { | ||||||
|  |   return expr.op.func(vecEval(ss, expr.arg1), vecEval(ss, expr.arg2), vecEval(ss, expr.arg3)); | ||||||
| } | } | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2, typename T3> | /////////////////////////////////////////////////// | ||||||
| auto inline eval(const unsigned int ss, | // handle nodes in syntax tree- eval one operand coalesced | ||||||
|                  const LatticeTrinaryExpression<Op, T1, T2, T3> | /////////////////////////////////////////////////// | ||||||
|                      &expr)  // eval three operands | template <typename Op, typename T1> accelerator_inline  | ||||||
|     -> decltype(expr.first.func(eval(ss, std::get<0>(expr.second)), | auto eval(const uint64_t ss, const LatticeUnaryExpression<Op, T1> &expr)   | ||||||
|                                 eval(ss, std::get<1>(expr.second)), |   -> decltype(expr.op.func( eval(ss, expr.arg1))) | ||||||
|                                 eval(ss, std::get<2>(expr.second)))) { | { | ||||||
|   return expr.first.func(eval(ss, std::get<0>(expr.second)), |   return expr.op.func( eval(ss, expr.arg1) ); | ||||||
|                          eval(ss, std::get<1>(expr.second)), | } | ||||||
|                          eval(ss, std::get<2>(expr.second))); | // eval two operands | ||||||
|  | template <typename Op, typename T1, typename T2> accelerator_inline | ||||||
|  | auto eval(const uint64_t ss, const LatticeBinaryExpression<Op, T1, T2> &expr)   | ||||||
|  |   -> decltype(expr.op.func( eval(ss,expr.arg1),eval(ss,expr.arg2))) | ||||||
|  | { | ||||||
|  |   return expr.op.func( eval(ss,expr.arg1), eval(ss,expr.arg2) ); | ||||||
|  | } | ||||||
|  | // eval three operands | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> accelerator_inline | ||||||
|  | auto eval(const uint64_t ss, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)   | ||||||
|  |   -> decltype(expr.op.func(eval(ss, expr.arg1),  | ||||||
|  | 			   eval(ss, expr.arg2),  | ||||||
|  | 			   eval(ss, expr.arg3))) | ||||||
|  | { | ||||||
|  | #ifdef GRID_SIMT | ||||||
|  |   // Handles Nsimd (vInteger) != Nsimd(ComplexD) | ||||||
|  |   typedef decltype(vecEval(ss, expr.arg2)) rvobj; | ||||||
|  |   typedef typename std::remove_reference<rvobj>::type vobj; | ||||||
|  |  | ||||||
|  |   const int Nsimd = vobj::vector_type::Nsimd(); | ||||||
|  |  | ||||||
|  |   auto vpred = vecEval(ss,expr.arg1); | ||||||
|  |  | ||||||
|  |   ExtractBuffer<Integer> mask(Nsimd); | ||||||
|  |   extract<vInteger, Integer>(TensorRemove(vpred), mask); | ||||||
|  |  | ||||||
|  |   int s = acceleratorSIMTlane(Nsimd); | ||||||
|  |   return expr.op.func(mask[s], | ||||||
|  | 		      eval(ss, expr.arg2),  | ||||||
|  | 		      eval(ss, expr.arg3)); | ||||||
|  | #else | ||||||
|  |   return expr.op.func(eval(ss, expr.arg1), | ||||||
|  | 		      eval(ss, expr.arg2),  | ||||||
|  | 		      eval(ss, expr.arg3)); | ||||||
|  | #endif | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // Obtain the grid from an expression, ensuring conformable. This must follow a | // Obtain the grid from an expression, ensuring conformable. This must follow a | ||||||
| // tree recursion | // tree recursion; must retain grid pointer in the LatticeView class which sucks | ||||||
|  | // Use a different method, and make it void *. | ||||||
|  | // Perhaps a conformable method. | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| template <class T1, | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|           typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | accelerator_inline void GridFromExpression(GridBase *&grid, const T1 &lat)  // Lattice leaf | ||||||
| inline void GridFromExpression(GridBase *&grid, const T1 &lat)  // Lattice leaf |  | ||||||
| { | { | ||||||
|   if (grid) { |   lat.Conformable(grid); | ||||||
|     conformable(grid, lat._grid); |  | ||||||
| } | } | ||||||
|   grid = lat._grid; |  | ||||||
| } | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
| template <class T1, | accelerator_inline  | ||||||
|           typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | void GridFromExpression(GridBase *&grid,const T1 ¬lat)  // non-lattice leaf | ||||||
| inline void GridFromExpression(GridBase *&grid, |  | ||||||
|                                const T1 ¬lat)  // non-lattice leaf |  | ||||||
| {} | {} | ||||||
|  |  | ||||||
| template <typename Op, typename T1> | template <typename Op, typename T1> | ||||||
| inline void GridFromExpression(GridBase *&grid, | accelerator_inline  | ||||||
|                                const LatticeUnaryExpression<Op, T1> &expr) { | void GridFromExpression(GridBase *&grid,const LatticeUnaryExpression<Op, T1> &expr)  | ||||||
|   GridFromExpression(grid, std::get<0>(expr.second));  // recurse | { | ||||||
|  |   GridFromExpression(grid, expr.arg1);  // recurse | ||||||
| } | } | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2> | template <typename Op, typename T1, typename T2> | ||||||
| inline void GridFromExpression( | accelerator_inline  | ||||||
|     GridBase *&grid, const LatticeBinaryExpression<Op, T1, T2> &expr) { | void GridFromExpression(GridBase *&grid, const LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|   GridFromExpression(grid, std::get<0>(expr.second));  // recurse | { | ||||||
|   GridFromExpression(grid, std::get<1>(expr.second)); |   GridFromExpression(grid, expr.arg1);  // recurse | ||||||
|  |   GridFromExpression(grid, expr.arg2); | ||||||
| } | } | ||||||
| template <typename Op, typename T1, typename T2, typename T3> | template <typename Op, typename T1, typename T2, typename T3> | ||||||
| inline void GridFromExpression( | accelerator_inline  | ||||||
|     GridBase *&grid, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) { | void GridFromExpression(GridBase *&grid, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|   GridFromExpression(grid, std::get<0>(expr.second));  // recurse | { | ||||||
|   GridFromExpression(grid, std::get<1>(expr.second)); |   GridFromExpression(grid, expr.arg1);  // recurse | ||||||
|   GridFromExpression(grid, std::get<2>(expr.second)); |   GridFromExpression(grid, expr.arg2);  // recurse | ||||||
|  |   GridFromExpression(grid, expr.arg3);  // recurse | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // Obtain the CB from an expression, ensuring conformable. This must follow a | // Obtain the CB from an expression, ensuring conformable. This must follow a | ||||||
| // tree recursion | // tree recursion | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| template <class T1, | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|           typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> |  | ||||||
| inline void CBFromExpression(int &cb, const T1 &lat)  // Lattice leaf | inline void CBFromExpression(int &cb, const T1 &lat)  // Lattice leaf | ||||||
| { | { | ||||||
|   if ((cb == Odd) || (cb == Even)) { |   if ((cb == Odd) || (cb == Even)) { | ||||||
|     assert(cb == lat.checkerboard); |     assert(cb == lat.Checkerboard()); | ||||||
|   } |   } | ||||||
|   cb = lat.checkerboard; |   cb = lat.Checkerboard(); | ||||||
|   //  std::cout<<GridLogMessage<<"Lattice leaf cb "<<cb<<std::endl; |  | ||||||
| } | } | ||||||
| template <class T1, | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|           typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | inline void CBFromExpression(int &cb, const T1 ¬lat) {} // non-lattice leaf | ||||||
| inline void CBFromExpression(int &cb, const T1 ¬lat)  // non-lattice leaf | template <typename Op, typename T1> inline  | ||||||
|  | void CBFromExpression(int &cb,const LatticeUnaryExpression<Op, T1> &expr)  | ||||||
| { | { | ||||||
|   //  std::cout<<GridLogMessage<<"Non lattice leaf cb"<<cb<<std::endl; |   CBFromExpression(cb, expr.arg1);  // recurse AST | ||||||
| } | } | ||||||
| template <typename Op, typename T1> | template <typename Op, typename T1, typename T2> inline  | ||||||
| inline void CBFromExpression(int &cb, | void CBFromExpression(int &cb,const LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|                              const LatticeUnaryExpression<Op, T1> &expr) { | { | ||||||
|   CBFromExpression(cb, std::get<0>(expr.second));  // recurse |   CBFromExpression(cb, expr.arg1);  // recurse AST | ||||||
|   //  std::cout<<GridLogMessage<<"Unary node cb "<<cb<<std::endl; |   CBFromExpression(cb, expr.arg2);  // recurse AST | ||||||
| } |  | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2> |  | ||||||
| inline void CBFromExpression(int &cb, |  | ||||||
|                              const LatticeBinaryExpression<Op, T1, T2> &expr) { |  | ||||||
|   CBFromExpression(cb, std::get<0>(expr.second));  // recurse |  | ||||||
|   CBFromExpression(cb, std::get<1>(expr.second)); |  | ||||||
|   //  std::cout<<GridLogMessage<<"Binary node cb "<<cb<<std::endl; |  | ||||||
| } | } | ||||||
| template <typename Op, typename T1, typename T2, typename T3> | template <typename Op, typename T1, typename T2, typename T3> | ||||||
| inline void CBFromExpression( | inline void CBFromExpression(int &cb, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|     int &cb, const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) { | { | ||||||
|   CBFromExpression(cb, std::get<0>(expr.second));  // recurse |   CBFromExpression(cb, expr.arg1);  // recurse AST | ||||||
|   CBFromExpression(cb, std::get<1>(expr.second)); |   CBFromExpression(cb, expr.arg2);  // recurse AST | ||||||
|   CBFromExpression(cb, std::get<2>(expr.second)); |   CBFromExpression(cb, expr.arg3);  // recurse AST | ||||||
|   //  std::cout<<GridLogMessage<<"Trinary node cb "<<cb<<std::endl; | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | // ViewOpen | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewOpen(T1 &lat)  // Lattice leaf | ||||||
|  | { | ||||||
|  |   lat.ViewOpen(AcceleratorRead); | ||||||
|  | } | ||||||
|  | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  |   inline void ExpressionViewOpen(T1 ¬lat) {} | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1> inline  | ||||||
|  | void ExpressionViewOpen(LatticeUnaryExpression<Op, T1> &expr)  | ||||||
|  | {   | ||||||
|  |   ExpressionViewOpen(expr.arg1); // recurse AST | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1, typename T2> inline  | ||||||
|  | void ExpressionViewOpen(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg2);  // rrecurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> | ||||||
|  | inline void ExpressionViewOpen(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewOpen(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg2);  // recurse AST | ||||||
|  |   ExpressionViewOpen(expr.arg3);  // recurse AST | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | // ViewClose | ||||||
|  | ////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class T1,typename std::enable_if<is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewClose( T1 &lat)  // Lattice leaf | ||||||
|  | { | ||||||
|  |   lat.ViewClose(); | ||||||
|  | } | ||||||
|  | template <class T1,typename std::enable_if<!is_lattice<T1>::value, T1>::type * = nullptr> | ||||||
|  | inline void ExpressionViewClose(T1 ¬lat) {} | ||||||
|  |  | ||||||
|  | template <typename Op, typename T1> inline  | ||||||
|  | void ExpressionViewClose(LatticeUnaryExpression<Op, T1> &expr)  | ||||||
|  | {   | ||||||
|  |   ExpressionViewClose(expr.arg1); // recurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2> inline  | ||||||
|  | void ExpressionViewClose(LatticeBinaryExpression<Op, T1, T2> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewClose(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg2);  // recurse AST | ||||||
|  | } | ||||||
|  | template <typename Op, typename T1, typename T2, typename T3> | ||||||
|  | inline void ExpressionViewClose(LatticeTrinaryExpression<Op, T1, T2, T3> &expr)  | ||||||
|  | { | ||||||
|  |   ExpressionViewClose(expr.arg1);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg2);  // recurse AST | ||||||
|  |   ExpressionViewClose(expr.arg3);  // recurse AST | ||||||
| } | } | ||||||
|  |  | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| // Unary operators and funcs | // Unary operators and funcs | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| #define GridUnopClass(name, ret)					\ | #define GridUnopClass(name, ret)					\ | ||||||
|   template <class arg>                                                    \ |  | ||||||
|   struct name {								\ |   struct name {								\ | ||||||
|     static auto inline func(const arg a) -> decltype(ret) { return ret; } \ |     template<class _arg> static auto accelerator_inline func(const _arg a) -> decltype(ret) { return ret; } \ | ||||||
|   }; |   }; | ||||||
|  |  | ||||||
| GridUnopClass(UnarySub, -a); | GridUnopClass(UnarySub, -a); | ||||||
| GridUnopClass(UnaryNot, Not(a)); | GridUnopClass(UnaryNot, Not(a)); | ||||||
| GridUnopClass(UnaryAdj, adj(a)); |  | ||||||
| GridUnopClass(UnaryConj, conjugate(a)); |  | ||||||
| GridUnopClass(UnaryTrace, trace(a)); | GridUnopClass(UnaryTrace, trace(a)); | ||||||
| GridUnopClass(UnaryTranspose, transpose(a)); | GridUnopClass(UnaryTranspose, transpose(a)); | ||||||
| GridUnopClass(UnaryTa, Ta(a)); | GridUnopClass(UnaryTa, Ta(a)); | ||||||
| GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a)); | GridUnopClass(UnaryProjectOnGroup, ProjectOnGroup(a)); | ||||||
| GridUnopClass(UnaryReal, real(a)); |  | ||||||
| GridUnopClass(UnaryImag, imag(a)); |  | ||||||
| GridUnopClass(UnaryToReal, toReal(a)); |  | ||||||
| GridUnopClass(UnaryToComplex, toComplex(a)); |  | ||||||
| GridUnopClass(UnaryTimesI, timesI(a)); | GridUnopClass(UnaryTimesI, timesI(a)); | ||||||
| GridUnopClass(UnaryTimesMinusI, timesMinusI(a)); | GridUnopClass(UnaryTimesMinusI, timesMinusI(a)); | ||||||
| GridUnopClass(UnaryAbs, abs(a)); | GridUnopClass(UnaryAbs, abs(a)); | ||||||
| GridUnopClass(UnarySqrt, sqrt(a)); | GridUnopClass(UnarySqrt, sqrt(a)); | ||||||
| GridUnopClass(UnaryRsqrt, rsqrt(a)); |  | ||||||
| GridUnopClass(UnarySin, sin(a)); | GridUnopClass(UnarySin, sin(a)); | ||||||
| GridUnopClass(UnaryCos, cos(a)); | GridUnopClass(UnaryCos, cos(a)); | ||||||
| GridUnopClass(UnaryAsin, asin(a)); | GridUnopClass(UnaryAsin, asin(a)); | ||||||
| @@ -251,18 +361,20 @@ GridUnopClass(UnaryExp, exp(a)); | |||||||
| // Binary operators | // Binary operators | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| #define GridBinOpClass(name, combination)			\ | #define GridBinOpClass(name, combination)			\ | ||||||
|   template <class left, class right>                           \ |  | ||||||
|   struct name {							\ |   struct name {							\ | ||||||
|     static auto inline func(const left &lhs, const right &rhs) \ |     template <class _left, class _right>			\ | ||||||
|         -> decltype(combination) const {                       \ |     static auto accelerator_inline				\ | ||||||
|  |     func(const _left &lhs, const _right &rhs)			\ | ||||||
|  |       -> decltype(combination) const				\ | ||||||
|  |     {								\ | ||||||
|       return combination;					\ |       return combination;					\ | ||||||
|     }								\ |     }								\ | ||||||
|   } |   }; | ||||||
|  |  | ||||||
| GridBinOpClass(BinaryAdd, lhs + rhs); | GridBinOpClass(BinaryAdd, lhs + rhs); | ||||||
| GridBinOpClass(BinarySub, lhs - rhs); | GridBinOpClass(BinarySub, lhs - rhs); | ||||||
| GridBinOpClass(BinaryMul, lhs *rhs); | GridBinOpClass(BinaryMul, lhs *rhs); | ||||||
| GridBinOpClass(BinaryDiv, lhs /rhs); | GridBinOpClass(BinaryDiv, lhs /rhs); | ||||||
|  |  | ||||||
| GridBinOpClass(BinaryAnd, lhs &rhs); | GridBinOpClass(BinaryAnd, lhs &rhs); | ||||||
| GridBinOpClass(BinaryOr, lhs | rhs); | GridBinOpClass(BinaryOr, lhs | rhs); | ||||||
| GridBinOpClass(BinaryAndAnd, lhs &&rhs); | GridBinOpClass(BinaryAndAnd, lhs &&rhs); | ||||||
| @@ -272,70 +384,53 @@ GridBinOpClass(BinaryOrOr, lhs || rhs); | |||||||
| // Trinary conditional op | // Trinary conditional op | ||||||
| //////////////////////////////////////////////////// | //////////////////////////////////////////////////// | ||||||
| #define GridTrinOpClass(name, combination)				\ | #define GridTrinOpClass(name, combination)				\ | ||||||
|   template <class predicate, class left, class right>                          \ |  | ||||||
|   struct name {								\ |   struct name {								\ | ||||||
|     static auto inline func(const predicate &pred, const left &lhs,            \ |     template <class _predicate,class _left, class _right>		\ | ||||||
|                             const right &rhs) -> decltype(combination) const { \ |     static auto accelerator_inline					\ | ||||||
|  |     func(const _predicate &pred, const _left &lhs, const _right &rhs)	\ | ||||||
|  |       -> decltype(combination) const					\ | ||||||
|  |     {									\ | ||||||
|       return combination;						\ |       return combination;						\ | ||||||
|     }									\ |     }									\ | ||||||
|   } |   }; | ||||||
|  |  | ||||||
| GridTrinOpClass( | GridTrinOpClass(TrinaryWhere, | ||||||
|     TrinaryWhere, | 		(predicatedWhere< | ||||||
|     (predicatedWhere<predicate, typename std::remove_reference<left>::type, | 		 typename std::remove_reference<_predicate>::type,  | ||||||
|                      typename std::remove_reference<right>::type>(pred, lhs, | 		 typename std::remove_reference<_left>::type, | ||||||
|                                                                   rhs))); | 		 typename std::remove_reference<_right>::type>(pred, lhs,rhs))); | ||||||
|  |  | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
| // Operator syntactical glue | // Operator syntactical glue | ||||||
| //////////////////////////////////////////// | //////////////////////////////////////////// | ||||||
|  | #define GRID_UNOP(name)   name | ||||||
| #define GRID_UNOP(name) name<decltype(eval(0, arg))> | #define GRID_BINOP(name)  name | ||||||
| #define GRID_BINOP(name) name<decltype(eval(0, lhs)), decltype(eval(0, rhs))> | #define GRID_TRINOP(name) name | ||||||
| #define GRID_TRINOP(name) \ |  | ||||||
|   name<decltype(eval(0, pred)), decltype(eval(0, lhs)), decltype(eval(0, rhs))> |  | ||||||
|  |  | ||||||
| #define GRID_DEF_UNOP(op, name)						\ | #define GRID_DEF_UNOP(op, name)						\ | ||||||
|   template <typename T1,                                                    \ |   template <typename T1, typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \ | ||||||
|             typename std::enable_if<is_lattice<T1>::value ||                \ |   inline auto op(const T1 &arg) ->decltype(LatticeUnaryExpression<GRID_UNOP(name),T1>(GRID_UNOP(name)(), arg)) \ | ||||||
|                                         is_lattice_expr<T1>::value,         \ |   {									\ | ||||||
|                                     T1>::type * = nullptr>                  \ |     return     LatticeUnaryExpression<GRID_UNOP(name),T1>(GRID_UNOP(name)(), arg); \ | ||||||
|   inline auto op(const T1 &arg)                                             \ |  | ||||||
|       ->decltype(LatticeUnaryExpression<GRID_UNOP(name), const T1 &>(       \ |  | ||||||
|           std::make_pair(GRID_UNOP(name)(), std::forward_as_tuple(arg)))) { \ |  | ||||||
|     return LatticeUnaryExpression<GRID_UNOP(name), const T1 &>(             \ |  | ||||||
|         std::make_pair(GRID_UNOP(name)(), std::forward_as_tuple(arg)));     \ |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
| #define GRID_BINOP_LEFT(op, name)					\ | #define GRID_BINOP_LEFT(op, name)					\ | ||||||
|   template <typename T1, typename T2,					\ |   template <typename T1, typename T2,					\ | ||||||
|             typename std::enable_if<is_lattice<T1>::value ||                  \ |             typename std::enable_if<is_lattice<T1>::value||is_lattice_expr<T1>::value,T1>::type * = nullptr> \ | ||||||
|                                         is_lattice_expr<T1>::value,           \ |  | ||||||
|                                     T1>::type * = nullptr>                    \ |  | ||||||
|   inline auto op(const T1 &lhs, const T2 &rhs)				\ |   inline auto op(const T1 &lhs, const T2 &rhs)				\ | ||||||
|       ->decltype(                                                             \ |     ->decltype(LatticeBinaryExpression<GRID_BINOP(name),T1,T2>(GRID_BINOP(name)(),lhs,rhs)) \ | ||||||
|           LatticeBinaryExpression<GRID_BINOP(name), const T1 &, const T2 &>(  \ |   {									\ | ||||||
|               std::make_pair(GRID_BINOP(name)(),                              \ |     return     LatticeBinaryExpression<GRID_BINOP(name),T1,T2>(GRID_BINOP(name)(),lhs,rhs);\ | ||||||
|                              std::forward_as_tuple(lhs, rhs)))) {             \ |  | ||||||
|     return LatticeBinaryExpression<GRID_BINOP(name), const T1 &, const T2 &>( \ |  | ||||||
|         std::make_pair(GRID_BINOP(name)(), std::forward_as_tuple(lhs, rhs))); \ |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
| #define GRID_BINOP_RIGHT(op, name)					\ | #define GRID_BINOP_RIGHT(op, name)					\ | ||||||
|   template <typename T1, typename T2,					\ |   template <typename T1, typename T2,					\ | ||||||
|             typename std::enable_if<!is_lattice<T1>::value &&                 \ |             typename std::enable_if<!is_lattice<T1>::value&&!is_lattice_expr<T1>::value,T1>::type * = nullptr, \ | ||||||
|                                         !is_lattice_expr<T1>::value,          \ |             typename std::enable_if< is_lattice<T2>::value|| is_lattice_expr<T2>::value,T2>::type * = nullptr> \ | ||||||
|                                     T1>::type * = nullptr,                    \ |  | ||||||
|             typename std::enable_if<is_lattice<T2>::value ||                  \ |  | ||||||
|                                         is_lattice_expr<T2>::value,           \ |  | ||||||
|                                     T2>::type * = nullptr>                    \ |  | ||||||
|   inline auto op(const T1 &lhs, const T2 &rhs)				\ |   inline auto op(const T1 &lhs, const T2 &rhs)				\ | ||||||
|       ->decltype(                                                             \ |     ->decltype(LatticeBinaryExpression<GRID_BINOP(name),T1,T2>(GRID_BINOP(name)(),lhs, rhs)) \ | ||||||
|           LatticeBinaryExpression<GRID_BINOP(name), const T1 &, const T2 &>(  \ |   {									\ | ||||||
|               std::make_pair(GRID_BINOP(name)(),                              \ |     return     LatticeBinaryExpression<GRID_BINOP(name),T1,T2>(GRID_BINOP(name)(),lhs, rhs); \ | ||||||
|                              std::forward_as_tuple(lhs, rhs)))) {             \ |  | ||||||
|     return LatticeBinaryExpression<GRID_BINOP(name), const T1 &, const T2 &>( \ |  | ||||||
|         std::make_pair(GRID_BINOP(name)(), std::forward_as_tuple(lhs, rhs))); \ |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
| #define GRID_DEF_BINOP(op, name)		\ | #define GRID_DEF_BINOP(op, name)		\ | ||||||
| @@ -345,37 +440,28 @@ GridTrinOpClass( | |||||||
| #define GRID_DEF_TRINOP(op, name)					\ | #define GRID_DEF_TRINOP(op, name)					\ | ||||||
|   template <typename T1, typename T2, typename T3>			\ |   template <typename T1, typename T2, typename T3>			\ | ||||||
|   inline auto op(const T1 &pred, const T2 &lhs, const T3 &rhs)		\ |   inline auto op(const T1 &pred, const T2 &lhs, const T3 &rhs)		\ | ||||||
|       ->decltype(                                                              \ |     ->decltype(LatticeTrinaryExpression<GRID_TRINOP(name),T1,T2,T3>(GRID_TRINOP(name)(),pred, lhs, rhs)) \ | ||||||
|           LatticeTrinaryExpression<GRID_TRINOP(name), const T1 &, const T2 &,  \ |   {									\ | ||||||
|                                    const T3 &>(std::make_pair(                 \ |     return LatticeTrinaryExpression<GRID_TRINOP(name),T1,T2,T3>(GRID_TRINOP(name)(),pred, lhs, rhs); \ | ||||||
|               GRID_TRINOP(name)(), std::forward_as_tuple(pred, lhs, rhs)))) {  \ |  | ||||||
|     return LatticeTrinaryExpression<GRID_TRINOP(name), const T1 &, const T2 &, \ |  | ||||||
|                                     const T3 &>(std::make_pair(                \ |  | ||||||
|         GRID_TRINOP(name)(), std::forward_as_tuple(pred, lhs, rhs)));          \ |  | ||||||
|   } |   } | ||||||
|  |  | ||||||
| //////////////////////// | //////////////////////// | ||||||
| // Operator definitions | // Operator definitions | ||||||
| //////////////////////// | //////////////////////// | ||||||
|  |  | ||||||
| GRID_DEF_UNOP(operator-, UnarySub); | GRID_DEF_UNOP(operator-, UnarySub); | ||||||
| GRID_DEF_UNOP(Not, UnaryNot); | GRID_DEF_UNOP(Not, UnaryNot); | ||||||
| GRID_DEF_UNOP(operator!, UnaryNot); | GRID_DEF_UNOP(operator!, UnaryNot); | ||||||
| GRID_DEF_UNOP(adj, UnaryAdj); | //GRID_DEF_UNOP(adj, UnaryAdj); | ||||||
| GRID_DEF_UNOP(conjugate, UnaryConj); | //GRID_DEF_UNOP(conjugate, UnaryConj); | ||||||
| GRID_DEF_UNOP(trace, UnaryTrace); | GRID_DEF_UNOP(trace, UnaryTrace); | ||||||
| GRID_DEF_UNOP(transpose, UnaryTranspose); | GRID_DEF_UNOP(transpose, UnaryTranspose); | ||||||
| GRID_DEF_UNOP(Ta, UnaryTa); | GRID_DEF_UNOP(Ta, UnaryTa); | ||||||
| GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup); | GRID_DEF_UNOP(ProjectOnGroup, UnaryProjectOnGroup); | ||||||
| GRID_DEF_UNOP(real, UnaryReal); |  | ||||||
| GRID_DEF_UNOP(imag, UnaryImag); |  | ||||||
| GRID_DEF_UNOP(toReal, UnaryToReal); |  | ||||||
| GRID_DEF_UNOP(toComplex, UnaryToComplex); |  | ||||||
| GRID_DEF_UNOP(timesI, UnaryTimesI); | GRID_DEF_UNOP(timesI, UnaryTimesI); | ||||||
| GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI); | GRID_DEF_UNOP(timesMinusI, UnaryTimesMinusI); | ||||||
| GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the | GRID_DEF_UNOP(abs, UnaryAbs);  // abs overloaded in cmath C++98; DON'T do the | ||||||
|                                // abs-fabs-dabs-labs thing |                                // abs-fabs-dabs-labs thing | ||||||
| GRID_DEF_UNOP(sqrt, UnarySqrt); | GRID_DEF_UNOP(sqrt, UnarySqrt); | ||||||
| GRID_DEF_UNOP(rsqrt, UnaryRsqrt); |  | ||||||
| GRID_DEF_UNOP(sin, UnarySin); | GRID_DEF_UNOP(sin, UnarySin); | ||||||
| GRID_DEF_UNOP(cos, UnaryCos); | GRID_DEF_UNOP(cos, UnaryCos); | ||||||
| GRID_DEF_UNOP(asin, UnaryAsin); | GRID_DEF_UNOP(asin, UnaryAsin); | ||||||
| @@ -400,31 +486,36 @@ GRID_DEF_TRINOP(where, TrinaryWhere); | |||||||
| ///////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////// | ||||||
| template <class Op, class T1> | template <class Op, class T1> | ||||||
| auto closure(const LatticeUnaryExpression<Op, T1> &expr) | auto closure(const LatticeUnaryExpression<Op, T1> &expr) | ||||||
|     -> Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second))))> { |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type >  | ||||||
|   Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second))))> ret( | { | ||||||
|       expr); |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1)))>::type > ret(expr); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| template <class Op, class T1, class T2> | template <class Op, class T1, class T2> | ||||||
| auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr) | auto closure(const LatticeBinaryExpression<Op, T1, T2> &expr) | ||||||
|     -> Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second)), |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > | ||||||
|                                         eval(0, std::get<1>(expr.second))))> { | { | ||||||
|   Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second)), |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1),vecEval(0, expr.arg2)))>::type > ret(expr); | ||||||
|                                    eval(0, std::get<1>(expr.second))))> |  | ||||||
|       ret(expr); |  | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| template <class Op, class T1, class T2, class T3> | template <class Op, class T1, class T2, class T3> | ||||||
| auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | ||||||
|     -> Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second)), |   -> Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||||
|                                         eval(0, std::get<1>(expr.second)), | 				   vecEval(0, expr.arg2), | ||||||
|                                         eval(0, std::get<2>(expr.second))))> { | 				   vecEval(0, expr.arg3)))>::type > | ||||||
|   Lattice<decltype(expr.first.func(eval(0, std::get<0>(expr.second)), | { | ||||||
|                                    eval(0, std::get<1>(expr.second)), |   Lattice<typename std::remove_const<decltype(expr.op.func(vecEval(0, expr.arg1), | ||||||
|                                    eval(0, std::get<2>(expr.second))))> | 				vecEval(0, expr.arg2), | ||||||
|       ret(expr); | 			        vecEval(0, expr.arg3)))>::type >  ret(expr); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|  | #define EXPRESSION_CLOSURE(function)					\ | ||||||
|  |   template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr> \ | ||||||
|  |     auto function(Expression &expr) -> decltype(function(closure(expr))) \ | ||||||
|  |   {									\ | ||||||
|  |     return function(closure(expr));					\ | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |  | ||||||
| #undef GRID_UNOP | #undef GRID_UNOP | ||||||
| #undef GRID_BINOP | #undef GRID_BINOP | ||||||
| @@ -433,34 +524,7 @@ auto closure(const LatticeTrinaryExpression<Op, T1, T2, T3> &expr) | |||||||
| #undef GRID_DEF_UNOP | #undef GRID_DEF_UNOP | ||||||
| #undef GRID_DEF_BINOP | #undef GRID_DEF_BINOP | ||||||
| #undef GRID_DEF_TRINOP | #undef GRID_DEF_TRINOP | ||||||
| } |  | ||||||
|  |  | ||||||
| #if 0 | NAMESPACE_END(Grid); | ||||||
| using namespace Grid; |  | ||||||
|          |  | ||||||
|  int main(int argc,char **argv){ |  | ||||||
|     |  | ||||||
|    Lattice<double> v1(16); |  | ||||||
|    Lattice<double> v2(16); |  | ||||||
|    Lattice<double> v3(16); |  | ||||||
|  |  | ||||||
|    BinaryAdd<double,double> tmp; |  | ||||||
|    LatticeBinaryExpression<BinaryAdd<double,double>,Lattice<double> &,Lattice<double> &>  |  | ||||||
|      expr(std::make_pair(tmp, |  | ||||||
|     std::forward_as_tuple(v1,v2))); |  | ||||||
|    tmp.func(eval(0,v1),eval(0,v2)); |  | ||||||
|  |  | ||||||
|    auto var = v1+v2; |  | ||||||
|    std::cout<<GridLogMessage<<typeid(var).name()<<std::endl; |  | ||||||
|  |  | ||||||
|    v3=v1+v2; |  | ||||||
|    v3=v1+v2+v1*v2; |  | ||||||
|  }; |  | ||||||
|  |  | ||||||
| void testit(Lattice<double> &v1,Lattice<double> &v2,Lattice<double> &v3) |  | ||||||
| { |  | ||||||
|    v3=v1+v2+v1*v2; |  | ||||||
| } |  | ||||||
| #endif |  | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -7,6 +7,7 @@ | |||||||
|     Copyright (C) 2015 |     Copyright (C) 2015 | ||||||
|  |  | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
| @@ -28,228 +29,230 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_LATTICE_ARITH_H | #ifndef GRID_LATTICE_ARITH_H | ||||||
| #define GRID_LATTICE_ARITH_H | #define GRID_LATTICE_ARITH_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| //  avoid copy back routines for mult, mac, sub, add | //  avoid copy back routines for mult, mac, sub, add | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|  |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|  |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
| #ifdef STREAMING_STORES |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       obj1 tmp; |     auto lhs_t = lhs_v(ss); | ||||||
|       mult(&tmp,&lhs._odata[ss],&rhs._odata[ss]); |     auto rhs_t = rhs_v(ss); | ||||||
|       vstream(ret._odata[ss],tmp); |     mult(&tmp,&lhs_t,&rhs_t); | ||||||
| #else |     coalescedWrite(ret_v[ss],tmp); | ||||||
|       mult(&ret._odata[ss],&lhs._odata[ss],&rhs._odata[ss]); |   }); | ||||||
| #endif |  | ||||||
|     } |  | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|       mac(&tmp,&lhs._odata[ss],&rhs._odata[ss]); |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       vstream(ret._odata[ss],tmp); |     auto lhs_t=lhs_v(ss); | ||||||
| #else |     auto rhs_t=rhs_v(ss); | ||||||
|       mac(&ret._odata[ss],&lhs._odata[ss],&rhs._odata[ss]); |     auto tmp  =ret_v(ss); | ||||||
| #endif |     mac(&tmp,&lhs_t,&rhs_t); | ||||||
|     } |     coalescedWrite(ret_v[ss],tmp); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|       sub(&tmp,&lhs._odata[ss],&rhs._odata[ss]); |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       vstream(ret._odata[ss],tmp); |     decltype(coalescedRead(obj1())) tmp; | ||||||
| #else |     auto lhs_t=lhs_v(ss); | ||||||
|       sub(&ret._odata[ss],&lhs._odata[ss],&rhs._odata[ss]); |     auto rhs_t=rhs_v(ss); | ||||||
| #endif |     sub(&tmp,&lhs_t,&rhs_t); | ||||||
|  |     coalescedWrite(ret_v[ss],tmp); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|   } | template<class obj1,class obj2,class obj3> inline | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline |  | ||||||
| void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|   conformable(lhs,rhs); |   conformable(lhs,rhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|       add(&tmp,&lhs._odata[ss],&rhs._odata[ss]); |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       vstream(ret._odata[ss],tmp); |     decltype(coalescedRead(obj1())) tmp; | ||||||
| #else |     auto lhs_t=lhs_v(ss); | ||||||
|       add(&ret._odata[ss],&lhs._odata[ss],&rhs._odata[ss]); |     auto rhs_t=rhs_v(ss); | ||||||
| #endif |     add(&tmp,&lhs_t,&rhs_t); | ||||||
|     } |     coalescedWrite(ret_v[ss],tmp); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|    |    | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| //  avoid copy back routines for mult, mac, sub, add | //  avoid copy back routines for mult, mac, sub, add | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void mult(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(lhs,ret); |   conformable(lhs,ret); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|       obj1 tmp; |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       mult(&tmp,&lhs._odata[ss],&rhs); |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       vstream(ret._odata[ss],tmp); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|     } |     mult(&tmp,&lhs_v(ss),&rhs); | ||||||
|  |     coalescedWrite(ret_v[ss],tmp); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void mac(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,lhs); |   conformable(ret,lhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|       obj1 tmp; |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       mac(&tmp,&lhs._odata[ss],&rhs); |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       vstream(ret._odata[ss],tmp); |     auto tmp  =ret_v(ss); | ||||||
|     } |     auto lhs_t=lhs_v(ss); | ||||||
|  |     mac(&tmp,&lhs_t,&rhs); | ||||||
|  |     coalescedWrite(ret_v[ss],tmp); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void sub(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(ret,lhs); |   conformable(ret,lhs); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       sub(&tmp,&lhs._odata[ss],&rhs); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       vstream(ret._odata[ss],tmp); |     auto lhs_t=lhs_v(ss); | ||||||
| #else  |     sub(&tmp,&lhs_t,&rhs); | ||||||
|       sub(&ret._odata[ss],&lhs._odata[ss],&rhs); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
| } | } | ||||||
|   } | template<class obj1,class obj2,class obj3> inline | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline |  | ||||||
| void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | void add(Lattice<obj1> &ret,const Lattice<obj2> &lhs,const obj3 &rhs){ | ||||||
|     ret.checkerboard = lhs.checkerboard; |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|   conformable(lhs,ret); |   conformable(lhs,ret); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,lhs_v.size(),obj1::Nsimd(),{ | ||||||
|       add(&tmp,&lhs._odata[ss],&rhs); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       vstream(ret._odata[ss],tmp); |     auto lhs_t=lhs_v(ss); | ||||||
| #else  |     add(&tmp,&lhs_t,&rhs); | ||||||
|       add(&ret._odata[ss],&lhs._odata[ss],&rhs); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
|     } |  | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| //  avoid copy back routines for mult, mac, sub, add | //  avoid copy back routines for mult, mac, sub, add | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|     template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void mult(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = rhs.checkerboard; |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|       mult(&tmp,&lhs,&rhs._odata[ss]); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       vstream(ret._odata[ss],tmp); |     auto rhs_t=rhs_v(ss); | ||||||
| #else  |     mult(&tmp,&lhs,&rhs_t); | ||||||
|       mult(&ret._odata[ss],&lhs,&rhs._odata[ss]); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
|     } |  | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void mac(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = rhs.checkerboard; |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|       mac(&tmp,&lhs,&rhs._odata[ss]); |     auto tmp  =ret_v(ss); | ||||||
|       vstream(ret._odata[ss],tmp); |     auto rhs_t=rhs_v(ss); | ||||||
| #else  |     mac(&tmp,&lhs,&rhs_t); | ||||||
|       mac(&ret._odata[ss],&lhs,&rhs._odata[ss]); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
|     } |  | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline | template<class obj1,class obj2,class obj3> inline | ||||||
| void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void sub(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = rhs.checkerboard; |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|       sub(&tmp,&lhs,&rhs._odata[ss]); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       vstream(ret._odata[ss],tmp); |     auto rhs_t=rhs_v(ss); | ||||||
| #else  |     sub(&tmp,&lhs,&rhs_t); | ||||||
|       sub(&ret._odata[ss],&lhs,&rhs._odata[ss]); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
| } | } | ||||||
|   } | template<class obj1,class obj2,class obj3> inline | ||||||
|   template<class obj1,class obj2,class obj3> strong_inline |  | ||||||
| void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | void add(Lattice<obj1> &ret,const obj2 &lhs,const Lattice<obj3> &rhs){ | ||||||
|     ret.checkerboard = rhs.checkerboard; |   ret.Checkerboard() = rhs.Checkerboard(); | ||||||
|   conformable(ret,rhs); |   conformable(ret,rhs); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( rhs_v , lhs, AcceleratorRead); | ||||||
|       obj1 tmp; |   accelerator_for(ss,rhs_v.size(),obj1::Nsimd(),{ | ||||||
|       add(&tmp,&lhs,&rhs._odata[ss]); |     decltype(coalescedRead(obj1())) tmp; | ||||||
|       vstream(ret._odata[ss],tmp); |     auto rhs_t=rhs_v(ss); | ||||||
| #else  |     add(&tmp,&lhs,&rhs_t); | ||||||
|       add(&ret._odata[ss],&lhs,&rhs._odata[ss]); |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
|     } |  | ||||||
| } | } | ||||||
|    |    | ||||||
|   template<class sobj,class vobj> strong_inline | template<class sobj,class vobj> inline | ||||||
| void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y){ | void axpy(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y){ | ||||||
|     ret.checkerboard = x.checkerboard; |   ret.Checkerboard() = x.Checkerboard(); | ||||||
|   conformable(ret,x); |   conformable(ret,x); | ||||||
|   conformable(x,y); |   conformable(x,y); | ||||||
|     parallel_for(int ss=0;ss<x._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( x_v , x, AcceleratorRead); | ||||||
|       vobj tmp = a*x._odata[ss]+y._odata[ss]; |   autoView( y_v , y, AcceleratorRead); | ||||||
|       vstream(ret._odata[ss],tmp); |   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||||
| #else |     auto tmp = a*x_v(ss)+y_v(ss); | ||||||
|       ret._odata[ss]=a*x._odata[ss]+y._odata[ss]; |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
| } | } | ||||||
|   } | template<class sobj,class vobj> inline | ||||||
|   template<class sobj,class vobj> strong_inline |  | ||||||
| void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y){ | void axpby(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y){ | ||||||
|     ret.checkerboard = x.checkerboard; |   ret.Checkerboard() = x.Checkerboard(); | ||||||
|   conformable(ret,x); |   conformable(ret,x); | ||||||
|   conformable(x,y); |   conformable(x,y); | ||||||
|     parallel_for(int ss=0;ss<x._grid->oSites();ss++){ |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
| #ifdef STREAMING_STORES |   autoView( x_v , x, AcceleratorRead); | ||||||
|       vobj tmp = a*x._odata[ss]+b*y._odata[ss]; |   autoView( y_v , y, AcceleratorRead); | ||||||
|       vstream(ret._odata[ss],tmp); |   accelerator_for(ss,x_v.size(),vobj::Nsimd(),{ | ||||||
| #else |     auto tmp = a*x_v(ss)+b*y_v(ss); | ||||||
|       ret._odata[ss]=a*x._odata[ss]+b*y._odata[ss]; |     coalescedWrite(ret_v[ss],tmp); | ||||||
| #endif |   }); | ||||||
|     } |  | ||||||
| } | } | ||||||
|  |  | ||||||
|   template<class sobj,class vobj> strong_inline | template<class sobj,class vobj> inline | ||||||
|   RealD axpy_norm(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y){ | RealD axpy_norm(Lattice<vobj> &ret,sobj a,const Lattice<vobj> &x,const Lattice<vobj> &y) | ||||||
|  | { | ||||||
|     return axpy_norm_fast(ret,a,x,y); |     return axpy_norm_fast(ret,a,x,y); | ||||||
| } | } | ||||||
|   template<class sobj,class vobj> strong_inline | template<class sobj,class vobj> inline | ||||||
|   RealD axpby_norm(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y){ | RealD axpby_norm(Lattice<vobj> &ret,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y) | ||||||
|  | { | ||||||
|     return axpby_norm_fast(ret,a,b,x,y); |     return axpby_norm_fast(ret,a,b,x,y); | ||||||
| } | } | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -9,6 +9,7 @@ Copyright (C) 2015 | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
| This program is free software; you can redistribute it and/or modify | This program is free software; you can redistribute it and/or modify | ||||||
| it under the terms of the GNU General Public License as published by | it under the terms of the GNU General Public License as published by | ||||||
| @@ -28,311 +29,333 @@ See the full license in the file "LICENSE" in the top level distribution | |||||||
| directory | directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| 			   /*  END LEGAL */ | 			   /*  END LEGAL */ | ||||||
| #ifndef GRID_LATTICE_BASE_H |  | ||||||
| #define GRID_LATTICE_BASE_H | #pragma once  | ||||||
|  |  | ||||||
| #define STREAMING_STORES | #define STREAMING_STORES | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| // TODO:  |  | ||||||
| //       mac,real,imag |  | ||||||
|  |  | ||||||
| // Functionality: |  | ||||||
| //     -=,+=,*=,() |  | ||||||
| //     add,+,sub,-,mult,mac,* |  | ||||||
| //     adj,conjugate |  | ||||||
| //     real,imag |  | ||||||
| //     transpose,transposeIndex   |  | ||||||
| //     trace,traceIndex |  | ||||||
| //     peekIndex |  | ||||||
| //     innerProduct,outerProduct, |  | ||||||
| //     localNorm2 |  | ||||||
| //     localInnerProduct |  | ||||||
|  |  | ||||||
| extern int GridCshiftPermuteMap[4][16]; | extern int GridCshiftPermuteMap[4][16]; | ||||||
|  |  | ||||||
| //////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Basic expressions used in Expression Template | // The real lattice class, with normal copy and assignment semantics. | ||||||
| //////////////////////////////////////////////// | // This contains extra (host resident) grid pointer data that may be accessed by host code | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////// | ||||||
| class LatticeBase |  | ||||||
| { |  | ||||||
| public: |  | ||||||
|     virtual ~LatticeBase(void) = default; |  | ||||||
|     GridBase *_grid; |  | ||||||
| }; |  | ||||||
|      |  | ||||||
| class LatticeExpressionBase {}; |  | ||||||
|  |  | ||||||
| template <typename Op, typename T1>                            |  | ||||||
| class LatticeUnaryExpression  : public std::pair<Op,std::tuple<T1> > , public LatticeExpressionBase { |  | ||||||
|  public: |  | ||||||
|  LatticeUnaryExpression(const std::pair<Op,std::tuple<T1> > &arg): std::pair<Op,std::tuple<T1> >(arg) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2>               |  | ||||||
| class LatticeBinaryExpression : public std::pair<Op,std::tuple<T1,T2> > , public LatticeExpressionBase { |  | ||||||
|  public: |  | ||||||
|  LatticeBinaryExpression(const std::pair<Op,std::tuple<T1,T2> > &arg): std::pair<Op,std::tuple<T1,T2> >(arg) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| template <typename Op, typename T1, typename T2, typename T3>  |  | ||||||
| class LatticeTrinaryExpression :public std::pair<Op,std::tuple<T1,T2,T3> >, public LatticeExpressionBase { |  | ||||||
|  public: |  | ||||||
|  LatticeTrinaryExpression(const std::pair<Op,std::tuple<T1,T2,T3> > &arg): std::pair<Op,std::tuple<T1,T2,T3> >(arg) {}; |  | ||||||
| }; |  | ||||||
|  |  | ||||||
| void inline conformable(GridBase *lhs,GridBase *rhs) |  | ||||||
| { |  | ||||||
|   assert(lhs == rhs); |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template<class vobj> | template<class vobj> | ||||||
| class Lattice : public LatticeBase | class Lattice : public LatticeAccelerator<vobj> | ||||||
| { | { | ||||||
| public: | public: | ||||||
|     int checkerboard; |   GridBase *Grid(void) const { return this->_grid; } | ||||||
|     Vector<vobj> _odata; |   /////////////////////////////////////////////////// | ||||||
|      |   // Member types | ||||||
|     // to pthread need a computable loop where loop induction is not required |   /////////////////////////////////////////////////// | ||||||
|     int begin(void) { return 0;}; |  | ||||||
|     int end(void)   { return _odata.size(); } |  | ||||||
|     vobj & operator[](int i) { return _odata[i]; }; |  | ||||||
|     const vobj & operator[](int i) const { return _odata[i]; }; |  | ||||||
|  |  | ||||||
| public: |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |   typedef typename vobj::scalar_object scalar_object; | ||||||
|   typedef vobj vector_object; |   typedef vobj vector_object; | ||||||
|  |  | ||||||
|  | private: | ||||||
|  |   void dealloc(void) | ||||||
|  |   { | ||||||
|  |     if( this->_odata_size ) { | ||||||
|  |       alignedAllocator<vobj> alloc; | ||||||
|  |       alloc.deallocate(this->_odata,this->_odata_size); | ||||||
|  |       this->_odata=nullptr; | ||||||
|  |       this->_odata_size=0; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  |   void resize(uint64_t size) | ||||||
|  |   { | ||||||
|  |     if ( this->_odata_size != size ) { | ||||||
|  |       alignedAllocator<vobj> alloc; | ||||||
|  |  | ||||||
|  |       dealloc(); | ||||||
|  |        | ||||||
|  |       this->_odata_size = size; | ||||||
|  |       if ( size ) | ||||||
|  | 	this->_odata      = alloc.allocate(this->_odata_size); | ||||||
|  |       else  | ||||||
|  | 	this->_odata      = nullptr; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | public: | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Can use to make accelerator dirty without copy from host ; useful for temporaries "dont care" prev contents | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   void SetViewMode(ViewMode mode) { | ||||||
|  |     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||||
|  |     accessor.ViewClose(); | ||||||
|  |   } | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |   // Return a view object that may be dereferenced in site loops. | ||||||
|  |   // The view is trivially copy constructible and may be copied to an accelerator device | ||||||
|  |   // in device lambdas | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  |   LatticeView<vobj> View (ViewMode mode) const  | ||||||
|  |   { | ||||||
|  |     LatticeView<vobj> accessor(*( (LatticeAccelerator<vobj> *) this),mode); | ||||||
|  |     return accessor; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   ~Lattice() {  | ||||||
|  |     if ( this->_odata_size ) { | ||||||
|  |       dealloc(); | ||||||
|  |     } | ||||||
|  |    } | ||||||
|   //////////////////////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////////////////////// | ||||||
|   // Expression Template closure support |   // Expression Template closure support | ||||||
|   //////////////////////////////////////////////////////////////////////////////// |   //////////////////////////////////////////////////////////////////////////////// | ||||||
|   template <typename Op, typename T1>                         strong_inline Lattice<vobj> & operator=(const LatticeUnaryExpression<Op,T1> &expr) |   template <typename Op, typename T1> inline Lattice<vobj> & operator=(const LatticeUnaryExpression<Op,T1> &expr) | ||||||
|   { |   { | ||||||
|     GridBase *egrid(nullptr); |     GridBase *egrid(nullptr); | ||||||
|     GridFromExpression(egrid,expr); |     GridFromExpression(egrid,expr); | ||||||
|     assert(egrid!=nullptr); |     assert(egrid!=nullptr); | ||||||
|     conformable(_grid,egrid); |     conformable(this->_grid,egrid); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|      |      | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |     auto exprCopy = expr; | ||||||
| #ifdef STREAMING_STORES |     ExpressionViewOpen(exprCopy); | ||||||
|       vobj tmp = eval(ss,expr); |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       vstream(_odata[ss] ,tmp); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
| #else |       auto tmp = eval(ss,exprCopy); | ||||||
|       _odata[ss]=eval(ss,expr); |       coalescedWrite(me[ss],tmp); | ||||||
| #endif |     }); | ||||||
|     } |     me.ViewClose(); | ||||||
|  |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   template <typename Op, typename T1,typename T2> strong_inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr) |   template <typename Op, typename T1,typename T2> inline Lattice<vobj> & operator=(const LatticeBinaryExpression<Op,T1,T2> &expr) | ||||||
|   { |   { | ||||||
|     GridBase *egrid(nullptr); |     GridBase *egrid(nullptr); | ||||||
|     GridFromExpression(egrid,expr); |     GridFromExpression(egrid,expr); | ||||||
|     assert(egrid!=nullptr); |     assert(egrid!=nullptr); | ||||||
|     conformable(_grid,egrid); |     conformable(this->_grid,egrid); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |  | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |     auto exprCopy = expr; | ||||||
| #ifdef STREAMING_STORES |     ExpressionViewOpen(exprCopy); | ||||||
|       vobj tmp = eval(ss,expr); |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       vstream(_odata[ss] ,tmp); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
| #else |       auto tmp = eval(ss,exprCopy); | ||||||
|       _odata[ss]=eval(ss,expr); |       coalescedWrite(me[ss],tmp); | ||||||
| #endif |     }); | ||||||
|     } |     me.ViewClose(); | ||||||
|  |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   template <typename Op, typename T1,typename T2,typename T3> strong_inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr) |   template <typename Op, typename T1,typename T2,typename T3> inline Lattice<vobj> & operator=(const LatticeTrinaryExpression<Op,T1,T2,T3> &expr) | ||||||
|   { |   { | ||||||
|     GridBase *egrid(nullptr); |     GridBase *egrid(nullptr); | ||||||
|     GridFromExpression(egrid,expr); |     GridFromExpression(egrid,expr); | ||||||
|     assert(egrid!=nullptr); |     assert(egrid!=nullptr); | ||||||
|     conformable(_grid,egrid); |     conformable(this->_grid,egrid); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |     auto exprCopy = expr; | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |     ExpressionViewOpen(exprCopy); | ||||||
| #ifdef STREAMING_STORES |     auto me  = View(AcceleratorWriteDiscard); | ||||||
|       //vobj tmp = eval(ss,expr); |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|       vstream(_odata[ss] ,eval(ss,expr)); |       auto tmp = eval(ss,exprCopy); | ||||||
| #else |       coalescedWrite(me[ss],tmp); | ||||||
|       _odata[ss] = eval(ss,expr); |     }); | ||||||
| #endif |     me.ViewClose(); | ||||||
|     } |     ExpressionViewClose(exprCopy); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   //GridFromExpression is tricky to do |   //GridFromExpression is tricky to do | ||||||
|   template<class Op,class T1> |   template<class Op,class T1> | ||||||
|   Lattice(const LatticeUnaryExpression<Op,T1> & expr) { |   Lattice(const LatticeUnaryExpression<Op,T1> & expr) { | ||||||
|     _grid = nullptr; |     this->_grid = nullptr; | ||||||
|     GridFromExpression(_grid,expr); |     GridFromExpression(this->_grid,expr); | ||||||
|     assert(_grid!=nullptr); |     assert(this->_grid!=nullptr); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |  | ||||||
|     _odata.resize(_grid->oSites()); |     resize(this->_grid->oSites()); | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
| #ifdef STREAMING_STORES |     *this = expr; | ||||||
|       vobj tmp = eval(ss,expr); |  | ||||||
|       vstream(_odata[ss] ,tmp); |  | ||||||
| #else |  | ||||||
|       _odata[ss]=eval(ss,expr); |  | ||||||
| #endif |  | ||||||
|   } |   } | ||||||
|   }; |  | ||||||
|   template<class Op,class T1, class T2> |   template<class Op,class T1, class T2> | ||||||
|   Lattice(const LatticeBinaryExpression<Op,T1,T2> & expr) { |   Lattice(const LatticeBinaryExpression<Op,T1,T2> & expr) { | ||||||
|     _grid = nullptr; |     this->_grid = nullptr; | ||||||
|     GridFromExpression(_grid,expr); |     GridFromExpression(this->_grid,expr); | ||||||
|     assert(_grid!=nullptr); |     assert(this->_grid!=nullptr); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |  | ||||||
|     _odata.resize(_grid->oSites()); |     resize(this->_grid->oSites()); | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
| #ifdef STREAMING_STORES |     *this = expr; | ||||||
|       vobj tmp = eval(ss,expr); |  | ||||||
|       vstream(_odata[ss] ,tmp); |  | ||||||
| #else |  | ||||||
|       _odata[ss]=eval(ss,expr); |  | ||||||
| #endif |  | ||||||
|   } |   } | ||||||
|   }; |  | ||||||
|   template<class Op,class T1, class T2, class T3> |   template<class Op,class T1, class T2, class T3> | ||||||
|   Lattice(const LatticeTrinaryExpression<Op,T1,T2,T3> & expr) { |   Lattice(const LatticeTrinaryExpression<Op,T1,T2,T3> & expr) { | ||||||
|     _grid = nullptr; |     this->_grid = nullptr; | ||||||
|     GridFromExpression(_grid,expr); |     GridFromExpression(this->_grid,expr); | ||||||
|     assert(_grid!=nullptr); |     assert(this->_grid!=nullptr); | ||||||
|  |  | ||||||
|     int cb=-1; |     int cb=-1; | ||||||
|     CBFromExpression(cb,expr); |     CBFromExpression(cb,expr); | ||||||
|     assert( (cb==Odd) || (cb==Even)); |     assert( (cb==Odd) || (cb==Even)); | ||||||
|     checkerboard=cb; |     this->checkerboard=cb; | ||||||
|  |  | ||||||
|     _odata.resize(_grid->oSites()); |     resize(this->_grid->oSites()); | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
|       vstream(_odata[ss] ,eval(ss,expr)); |     *this = expr; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   template<class sobj> inline Lattice<vobj> & operator = (const sobj & r){ | ||||||
|  |     auto me  = View(CpuWrite); | ||||||
|  |     thread_for(ss,me.size(),{ | ||||||
|  | 	me[ss]= r; | ||||||
|  |     }); | ||||||
|  |     me.ViewClose(); | ||||||
|  |     return *this; | ||||||
|   } |   } | ||||||
|   }; |  | ||||||
|  |  | ||||||
|   ////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////// | ||||||
|   // Constructor requires "grid" passed. |   // Follow rule of five, with Constructor requires "grid" passed | ||||||
|   // what about a default grid? |   // to user defined constructor | ||||||
|   ////////////////////////////////////////////////////////////////// |   /////////////////////////////////////////// | ||||||
|   Lattice(GridBase *grid) : _odata(grid->oSites()) { |   // user defined constructor | ||||||
|     _grid = grid; |   /////////////////////////////////////////// | ||||||
|     //        _odata.reserve(_grid->oSites()); |   Lattice(GridBase *grid,ViewMode mode=AcceleratorWriteDiscard) {  | ||||||
|     //        _odata.resize(_grid->oSites()); |     this->_grid = grid; | ||||||
|     //      std::cout << "Constructing lattice object with Grid pointer "<<_grid<<std::endl; |     resize(this->_grid->oSites()); | ||||||
|     assert((((uint64_t)&_odata[0])&0xF) ==0); |     assert((((uint64_t)&this->_odata[0])&0xF) ==0); | ||||||
|     checkerboard=0; |     this->checkerboard=0; | ||||||
|  |     SetViewMode(mode); | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   Lattice(const Lattice& r){ // copy constructor |   //  virtual ~Lattice(void) = default; | ||||||
|     _grid = r._grid; |  | ||||||
|     checkerboard = r.checkerboard; |  | ||||||
|     _odata.resize(_grid->oSites());// essential |  | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
|       _odata[ss]=r._odata[ss]; |  | ||||||
|     }  	 |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   Lattice(Lattice&& r){ // move constructor |  | ||||||
|     _grid = r._grid; |  | ||||||
|     checkerboard = r.checkerboard; |  | ||||||
|     _odata=std::move(r._odata); |  | ||||||
|   } |  | ||||||
|    |  | ||||||
|   inline Lattice<vobj> & operator = (Lattice<vobj> && r) |  | ||||||
|   { |  | ||||||
|     _grid        = r._grid; |  | ||||||
|     checkerboard = r.checkerboard; |  | ||||||
|     _odata       =std::move(r._odata); |  | ||||||
|     return *this; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   inline Lattice<vobj> & operator = (const Lattice<vobj> & r){ |  | ||||||
|     _grid        = r._grid; |  | ||||||
|     checkerboard = r.checkerboard; |  | ||||||
|     _odata.resize(_grid->oSites());// essential |  | ||||||
|      |  | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
|       _odata[ss]=r._odata[ss]; |  | ||||||
|     }  	 |  | ||||||
|     return *this; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   template<class robj> strong_inline Lattice<vobj> & operator = (const Lattice<robj> & r){ |  | ||||||
|     this->checkerboard = r.checkerboard; |  | ||||||
|     conformable(*this,r); |  | ||||||
|      |  | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |  | ||||||
|       this->_odata[ss]=r._odata[ss]; |  | ||||||
|     } |  | ||||||
|     return *this; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   virtual ~Lattice(void) = default; |  | ||||||
|      |      | ||||||
|   void reset(GridBase* grid) { |   void reset(GridBase* grid) { | ||||||
|     if (_grid != grid) { |     if (this->_grid != grid) { | ||||||
|       _grid = grid; |       this->_grid = grid; | ||||||
|       _odata.resize(grid->oSites()); |       this->resize(grid->oSites()); | ||||||
|       checkerboard = 0; |       this->checkerboard = 0; | ||||||
|     } |     } | ||||||
|   } |   } | ||||||
|    |   /////////////////////////////////////////// | ||||||
|  |   // copy constructor | ||||||
|   template<class sobj> strong_inline Lattice<vobj> & operator = (const sobj & r){ |   /////////////////////////////////////////// | ||||||
|     parallel_for(int ss=0;ss<_grid->oSites();ss++){ |   Lattice(const Lattice& r){  | ||||||
|       this->_odata[ss]=r; |     this->_grid = r.Grid(); | ||||||
|  |     resize(this->_grid->oSites()); | ||||||
|  |     *this = r; | ||||||
|   } |   } | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // move constructor | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   Lattice(Lattice && r){  | ||||||
|  |     this->_grid = r.Grid(); | ||||||
|  |     this->_odata      = r._odata; | ||||||
|  |     this->_odata_size = r._odata_size; | ||||||
|  |     this->checkerboard= r.Checkerboard(); | ||||||
|  |     r._odata      = nullptr; | ||||||
|  |     r._odata_size = 0; | ||||||
|  |   } | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // assignment template | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   template<class robj> inline Lattice<vobj> & operator = (const Lattice<robj> & r){ | ||||||
|  |     typename std::enable_if<!std::is_same<robj,vobj>::value,int>::type i=0; | ||||||
|  |     conformable(*this,r); | ||||||
|  |     this->checkerboard = r.Checkerboard(); | ||||||
|  |     auto me =   View(AcceleratorWriteDiscard); | ||||||
|  |     auto him= r.View(AcceleratorRead); | ||||||
|  |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|  |       coalescedWrite(me[ss],him(ss)); | ||||||
|  |     }); | ||||||
|  |     me.ViewClose();    him.ViewClose(); | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // Copy assignment  | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   inline Lattice<vobj> & operator = (const Lattice<vobj> & r){ | ||||||
|  |     this->checkerboard = r.Checkerboard(); | ||||||
|  |     conformable(*this,r); | ||||||
|  |     auto me =   View(AcceleratorWriteDiscard); | ||||||
|  |     auto him= r.View(AcceleratorRead); | ||||||
|  |     accelerator_for(ss,me.size(),vobj::Nsimd(),{ | ||||||
|  |       coalescedWrite(me[ss],him(ss)); | ||||||
|  |     }); | ||||||
|  |     me.ViewClose();    him.ViewClose(); | ||||||
|  |     return *this; | ||||||
|  |   } | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   // Move assignment possible if same type | ||||||
|  |   /////////////////////////////////////////// | ||||||
|  |   inline Lattice<vobj> & operator = (Lattice<vobj> && r){ | ||||||
|  |  | ||||||
|  |     resize(0); // deletes if appropriate | ||||||
|  |     this->_grid       = r.Grid(); | ||||||
|  |     this->_odata      = r._odata; | ||||||
|  |     this->_odata_size = r._odata_size; | ||||||
|  |     this->checkerboard= r.Checkerboard(); | ||||||
|  |  | ||||||
|  |     r._odata      = nullptr; | ||||||
|  |     r._odata_size = 0; | ||||||
|  |      | ||||||
|  |     return *this; | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   ///////////////////////////////////////////////////////////////////////////// | ||||||
|   // *=,+=,-= operators inherit behvour from correspond */+/- operation |   // *=,+=,-= operators inherit behvour from correspond */+/- operation | ||||||
|   template<class T> strong_inline Lattice<vobj> &operator *=(const T &r) { |   ///////////////////////////////////////////////////////////////////////////// | ||||||
|  |   template<class T> inline Lattice<vobj> &operator *=(const T &r) { | ||||||
|     *this = (*this)*r; |     *this = (*this)*r; | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|    |    | ||||||
|   template<class T> strong_inline Lattice<vobj> &operator -=(const T &r) { |   template<class T> inline Lattice<vobj> &operator -=(const T &r) { | ||||||
|     *this = (*this)-r; |     *this = (*this)-r; | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|   template<class T> strong_inline Lattice<vobj> &operator +=(const T &r) { |   template<class T> inline Lattice<vobj> &operator +=(const T &r) { | ||||||
|     *this = (*this)+r; |     *this = (*this)+r; | ||||||
|     return *this; |     return *this; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|  |   friend inline void swap(Lattice &l, Lattice &r) {  | ||||||
|  |     conformable(l,r); | ||||||
|  |     LatticeAccelerator<vobj> tmp; | ||||||
|  |     LatticeAccelerator<vobj> *lp = (LatticeAccelerator<vobj> *)&l; | ||||||
|  |     LatticeAccelerator<vobj> *rp = (LatticeAccelerator<vobj> *)&r; | ||||||
|  |     tmp = *lp;    *lp=*rp;    *rp=tmp; | ||||||
|  |   } | ||||||
|  |  | ||||||
| }; // class Lattice | }; // class Lattice | ||||||
|  |  | ||||||
| template<class vobj> std::ostream& operator<< (std::ostream& stream, const Lattice<vobj> &o){ | template<class vobj> std::ostream& operator<< (std::ostream& stream, const Lattice<vobj> &o){ | ||||||
|     std::vector<int> gcoor; |  | ||||||
|   typedef typename vobj::scalar_object sobj; |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   for(int g=0;g<o.Grid()->_gsites;g++){ | ||||||
|  |  | ||||||
|  |     Coordinate gcoor; | ||||||
|  |     o.Grid()->GlobalIndexToGlobalCoor(g,gcoor); | ||||||
|  |  | ||||||
|     sobj ss; |     sobj ss; | ||||||
|     for(int g=0;g<o._grid->_gsites;g++){ |  | ||||||
|       o._grid->GlobalIndexToGlobalCoor(g,gcoor); |  | ||||||
|     peekSite(ss,o,gcoor); |     peekSite(ss,o,gcoor); | ||||||
|     stream<<"["; |     stream<<"["; | ||||||
|     for(int d=0;d<gcoor.size();d++){ |     for(int d=0;d<gcoor.size();d++){ | ||||||
| @@ -345,31 +368,5 @@ public: | |||||||
|   return stream; |   return stream; | ||||||
| } | } | ||||||
|    |    | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
| #include "Lattice_conformable.h" |  | ||||||
| #define GRID_LATTICE_EXPRESSION_TEMPLATES |  | ||||||
| #ifdef  GRID_LATTICE_EXPRESSION_TEMPLATES |  | ||||||
| #include "Lattice_ET.h" |  | ||||||
| #else  |  | ||||||
| #include "Lattice_overload.h" |  | ||||||
| #endif |  | ||||||
| #include "Lattice_arith.h" |  | ||||||
| #include "Lattice_trace.h" |  | ||||||
| #include "Lattice_transpose.h" |  | ||||||
| #include "Lattice_local.h" |  | ||||||
| #include "Lattice_reduction.h" |  | ||||||
| #include "Lattice_peekpoke.h" |  | ||||||
| #include "Lattice_reality.h" |  | ||||||
| #include "Lattice_comparison_utils.h" |  | ||||||
| #include "Lattice_comparison.h" |  | ||||||
| #include "Lattice_coordinate.h" |  | ||||||
| #include "Lattice_where.h" |  | ||||||
| #include "Lattice_rng.h" |  | ||||||
| #include "Lattice_unary.h" |  | ||||||
| #include "Lattice_transfer.h" |  | ||||||
|  |  | ||||||
|  |  | ||||||
| #endif |  | ||||||
|   | |||||||
							
								
								
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										248
									
								
								Grid/lattice/Lattice_basis.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,248 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  | Grid physics library, www.github.com/paboyle/Grid | ||||||
|  |  | ||||||
|  | Source file: ./lib/lattice/Lattice_basis.h | ||||||
|  |  | ||||||
|  | Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|  |  | ||||||
|  | This program is free software; you can redistribute it and/or modify | ||||||
|  | it under the terms of the GNU General Public License as published by | ||||||
|  | the Free Software Foundation; either version 2 of the License, or | ||||||
|  | (at your option) any later version. | ||||||
|  |  | ||||||
|  | This program is distributed in the hope that it will be useful, | ||||||
|  | but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  | GNU General Public License for more details. | ||||||
|  |  | ||||||
|  | You should have received a copy of the GNU General Public License along | ||||||
|  | with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  | See the full license in the file "LICENSE" in the top level distribution | ||||||
|  | directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | 			   /*  END LEGAL */ | ||||||
|  |  | ||||||
|  | #pragma once | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisOrthogonalize(std::vector<Field> &basis,Field &w,int k)  | ||||||
|  | { | ||||||
|  |   // If assume basis[j] are already orthonormal, | ||||||
|  |   // can take all inner products in parallel saving 2x bandwidth | ||||||
|  |   // Save 3x bandwidth on the second line of loop. | ||||||
|  |   // perhaps 2.5x speed up. | ||||||
|  |   // 2x overall in Multigrid Lanczos   | ||||||
|  |   for(int j=0; j<k; ++j){ | ||||||
|  |     auto ip = innerProduct(basis[j],w); | ||||||
|  |     w = w - ip*basis[j]; | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class VField, class Matrix> | ||||||
|  | void basisRotate(VField &basis,Matrix& Qt,int j0, int j1, int k0,int k1,int Nm)  | ||||||
|  | { | ||||||
|  |   typedef decltype(basis[0]) Field; | ||||||
|  |   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||||
|  |  | ||||||
|  |   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||||
|  |   typedef typename std::remove_reference<decltype(basis_v[0][0])>::type vobj; | ||||||
|  |   typedef typename std::remove_reference<decltype(Qt(0,0))>::type Coeff_t; | ||||||
|  |   GridBase* grid = basis[0].Grid(); | ||||||
|  |        | ||||||
|  |   for(int k=0;k<basis.size();k++){ | ||||||
|  |     basis_v.push_back(basis[k].View(AcceleratorWrite)); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | #if ( (!defined(GRID_CUDA)) ) | ||||||
|  |   int max_threads = thread_max(); | ||||||
|  |   Vector < vobj > Bt(Nm * max_threads); | ||||||
|  |   thread_region | ||||||
|  |     { | ||||||
|  |       vobj* B = &Bt[Nm * thread_num()]; | ||||||
|  |       thread_for_in_region(ss, grid->oSites(),{ | ||||||
|  | 	  for(int j=j0; j<j1; ++j) B[j]=0.; | ||||||
|  |        | ||||||
|  | 	  for(int j=j0; j<j1; ++j){ | ||||||
|  | 	    for(int k=k0; k<k1; ++k){ | ||||||
|  | 	      B[j] +=Qt(j,k) * basis_v[k][ss]; | ||||||
|  | 	    } | ||||||
|  | 	  } | ||||||
|  | 	  for(int j=j0; j<j1; ++j){ | ||||||
|  | 	    basis_v[j][ss] = B[j]; | ||||||
|  | 	  } | ||||||
|  | 	}); | ||||||
|  |     } | ||||||
|  | #else | ||||||
|  |   View *basis_vp = &basis_v[0]; | ||||||
|  |  | ||||||
|  |   int nrot = j1-j0; | ||||||
|  |   if (!nrot) // edge case not handled gracefully by Cuda | ||||||
|  |     return; | ||||||
|  |  | ||||||
|  |   uint64_t oSites   =grid->oSites(); | ||||||
|  |   uint64_t siteBlock=(grid->oSites()+nrot-1)/nrot; // Maximum 1 additional vector overhead | ||||||
|  |  | ||||||
|  |   Vector <vobj> Bt(siteBlock * nrot);  | ||||||
|  |   auto Bp=&Bt[0]; | ||||||
|  |  | ||||||
|  |   // GPU readable copy of matrix | ||||||
|  |   Vector<Coeff_t> Qt_jv(Nm*Nm); | ||||||
|  |   Coeff_t *Qt_p = & Qt_jv[0]; | ||||||
|  |   thread_for(i,Nm*Nm,{ | ||||||
|  |       int j = i/Nm; | ||||||
|  |       int k = i%Nm; | ||||||
|  |       Qt_p[i]=Qt(j,k); | ||||||
|  |   }); | ||||||
|  |  | ||||||
|  |   // Block the loop to keep storage footprint down | ||||||
|  |   for(uint64_t s=0;s<oSites;s+=siteBlock){ | ||||||
|  |  | ||||||
|  |     // remaining work in this block | ||||||
|  |     int ssites=MIN(siteBlock,oSites-s); | ||||||
|  |  | ||||||
|  |     // zero out the accumulators | ||||||
|  |     accelerator_for(ss,siteBlock*nrot,vobj::Nsimd(),{ | ||||||
|  | 	decltype(coalescedRead(Bp[ss])) z; | ||||||
|  | 	z=Zero(); | ||||||
|  | 	coalescedWrite(Bp[ss],z); | ||||||
|  |       }); | ||||||
|  |  | ||||||
|  |     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||||
|  | 	 | ||||||
|  | 	int j =sj%nrot; | ||||||
|  | 	int jj  =j0+j; | ||||||
|  | 	int ss =sj/nrot; | ||||||
|  | 	int sss=ss+s; | ||||||
|  |  | ||||||
|  | 	for(int k=k0; k<k1; ++k){ | ||||||
|  | 	  auto tmp = coalescedRead(Bp[ss*nrot+j]); | ||||||
|  | 	  coalescedWrite(Bp[ss*nrot+j],tmp+ Qt_p[jj*Nm+k] * coalescedRead(basis_v[k][sss])); | ||||||
|  | 	} | ||||||
|  |       }); | ||||||
|  |  | ||||||
|  |     accelerator_for(sj,ssites*nrot,vobj::Nsimd(),{ | ||||||
|  | 	int j =sj%nrot; | ||||||
|  | 	int jj  =j0+j; | ||||||
|  | 	int ss =sj/nrot; | ||||||
|  | 	int sss=ss+s; | ||||||
|  | 	coalescedWrite(basis_v[jj][sss],coalescedRead(Bp[ss*nrot+j])); | ||||||
|  |       }); | ||||||
|  |   } | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  |   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // Extract a single rotated vector | ||||||
|  | template<class Field> | ||||||
|  | void basisRotateJ(Field &result,std::vector<Field> &basis,Eigen::MatrixXd& Qt,int j, int k0,int k1,int Nm)  | ||||||
|  | { | ||||||
|  |   typedef decltype(basis[0].View(AcceleratorRead)) View; | ||||||
|  |   typedef typename Field::vector_object vobj; | ||||||
|  |   GridBase* grid = basis[0].Grid(); | ||||||
|  |  | ||||||
|  |   result.Checkerboard() = basis[0].Checkerboard(); | ||||||
|  |  | ||||||
|  |   Vector<View> basis_v; basis_v.reserve(basis.size()); | ||||||
|  |   for(int k=0;k<basis.size();k++){ | ||||||
|  |     basis_v.push_back(basis[k].View(AcceleratorRead)); | ||||||
|  |   } | ||||||
|  |   vobj zz=Zero(); | ||||||
|  |   Vector<double> Qt_jv(Nm); | ||||||
|  |   double * Qt_j = & Qt_jv[0]; | ||||||
|  |   for(int k=0;k<Nm;++k) Qt_j[k]=Qt(j,k); | ||||||
|  |  | ||||||
|  |   auto basis_vp=& basis_v[0]; | ||||||
|  |   autoView(result_v,result,AcceleratorWrite); | ||||||
|  |   accelerator_for(ss, grid->oSites(),vobj::Nsimd(),{ | ||||||
|  |     vobj zzz=Zero(); | ||||||
|  |     auto B=coalescedRead(zzz); | ||||||
|  |     for(int k=k0; k<k1; ++k){ | ||||||
|  |       B +=Qt_j[k] * coalescedRead(basis_vp[k][ss]); | ||||||
|  |     } | ||||||
|  |     coalescedWrite(result_v[ss], B); | ||||||
|  |   }); | ||||||
|  |   for(int k=0;k<basis.size();k++) basis_v[k].ViewClose(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisReorderInPlace(std::vector<Field> &_v,std::vector<RealD>& sort_vals, std::vector<int>& idx)  | ||||||
|  | { | ||||||
|  |   int vlen = idx.size(); | ||||||
|  |  | ||||||
|  |   assert(vlen>=1); | ||||||
|  |   assert(vlen<=sort_vals.size()); | ||||||
|  |   assert(vlen<=_v.size()); | ||||||
|  |  | ||||||
|  |   for (size_t i=0;i<vlen;i++) { | ||||||
|  |  | ||||||
|  |     if (idx[i] != i) { | ||||||
|  |  | ||||||
|  |       ////////////////////////////////////// | ||||||
|  |       // idx[i] is a table of desired sources giving a permutation. | ||||||
|  |       // Swap v[i] with v[idx[i]]. | ||||||
|  |       // Find  j>i for which _vnew[j] = _vold[i], | ||||||
|  |       // track the move idx[j] => idx[i] | ||||||
|  |       // track the move idx[i] => i | ||||||
|  |       ////////////////////////////////////// | ||||||
|  |       size_t j; | ||||||
|  |       for (j=i;j<idx.size();j++) | ||||||
|  | 	if (idx[j]==i) | ||||||
|  | 	  break; | ||||||
|  |  | ||||||
|  |       assert(idx[i] > i);     assert(j!=idx.size());      assert(idx[j]==i); | ||||||
|  |  | ||||||
|  |       swap(_v[i],_v[idx[i]]); // should use vector move constructor, no data copy | ||||||
|  |       std::swap(sort_vals[i],sort_vals[idx[i]]); | ||||||
|  |  | ||||||
|  |       idx[j] = idx[i]; | ||||||
|  |       idx[i] = i; | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | inline std::vector<int> basisSortGetIndex(std::vector<RealD>& sort_vals)  | ||||||
|  | { | ||||||
|  |   std::vector<int> idx(sort_vals.size()); | ||||||
|  |   std::iota(idx.begin(), idx.end(), 0); | ||||||
|  |  | ||||||
|  |   // sort indexes based on comparing values in v | ||||||
|  |   std::sort(idx.begin(), idx.end(), [&sort_vals](int i1, int i2) { | ||||||
|  |     return ::fabs(sort_vals[i1]) < ::fabs(sort_vals[i2]); | ||||||
|  |   }); | ||||||
|  |   return idx; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class Field> | ||||||
|  | void basisSortInPlace(std::vector<Field> & _v,std::vector<RealD>& sort_vals, bool reverse)  | ||||||
|  | { | ||||||
|  |   std::vector<int> idx = basisSortGetIndex(sort_vals); | ||||||
|  |   if (reverse) | ||||||
|  |     std::reverse(idx.begin(), idx.end()); | ||||||
|  |    | ||||||
|  |   basisReorderInPlace(_v,sort_vals,idx); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | // PAB: faster to compute the inner products first then fuse loops. | ||||||
|  | // If performance critical can improve. | ||||||
|  | template<class Field> | ||||||
|  | void basisDeflate(const std::vector<Field> &_v,const std::vector<RealD>& eval,const Field& src_orig,Field& result) { | ||||||
|  |   result = Zero(); | ||||||
|  |   assert(_v.size()==eval.size()); | ||||||
|  |   int N = (int)_v.size(); | ||||||
|  |   for (int i=0;i<N;i++) { | ||||||
|  |     Field& tmp = _v[i]; | ||||||
|  |     axpy(result,TensorRemove(innerProduct(tmp,src_orig)) / eval[i],tmp,result); | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_LATTICE_COMPARISON_H | #ifndef GRID_LATTICE_COMPARISON_H | ||||||
| #define GRID_LATTICE_COMPARISON_H | #define GRID_LATTICE_COMPARISON_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // relational operators | // relational operators | ||||||
| @@ -40,40 +40,50 @@ namespace Grid { | |||||||
| //Query supporting logical &&, ||,  | //Query supporting logical &&, ||,  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
|  | typedef iScalar<vInteger> vPredicate ; | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // compare lattice to lattice | // compare lattice to lattice | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
|  |  | ||||||
| template<class vfunctor,class lobj,class robj>   | template<class vfunctor,class lobj,class robj>   | ||||||
|     inline Lattice<vInteger> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs) | inline Lattice<vPredicate> LLComparison(vfunctor op,const Lattice<lobj> &lhs,const Lattice<robj> &rhs) | ||||||
| { | { | ||||||
|     Lattice<vInteger> ret(rhs._grid); |   Lattice<vPredicate> ret(rhs.Grid()); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |   autoView( lhs_v, lhs, CpuRead); | ||||||
|       ret._odata[ss]=op(lhs._odata[ss],rhs._odata[ss]); |   autoView( rhs_v, rhs, CpuRead); | ||||||
|     } |   autoView( ret_v, ret, CpuWrite); | ||||||
|  |   thread_for( ss, rhs_v.size(), { | ||||||
|  |       ret_v[ss]=op(lhs_v[ss],rhs_v[ss]); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // compare lattice to scalar | // compare lattice to scalar | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| template<class vfunctor,class lobj,class robj>  | template<class vfunctor,class lobj,class robj>  | ||||||
|     inline Lattice<vInteger> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs) | inline Lattice<vPredicate> LSComparison(vfunctor op,const Lattice<lobj> &lhs,const robj &rhs) | ||||||
| { | { | ||||||
|     Lattice<vInteger> ret(lhs._grid); |   Lattice<vPredicate> ret(lhs.Grid()); | ||||||
|     parallel_for(int ss=0;ss<lhs._grid->oSites(); ss++){ |   autoView( lhs_v, lhs, CpuRead); | ||||||
|       ret._odata[ss]=op(lhs._odata[ss],rhs); |   autoView( ret_v, ret, CpuWrite); | ||||||
|     } |   thread_for( ss, lhs_v.size(), { | ||||||
|  |     ret_v[ss]=op(lhs_v[ss],rhs); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // compare scalar to lattice | // compare scalar to lattice | ||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| template<class vfunctor,class lobj,class robj>  | template<class vfunctor,class lobj,class robj>  | ||||||
|     inline Lattice<vInteger> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs) | inline Lattice<vPredicate> SLComparison(vfunctor op,const lobj &lhs,const Lattice<robj> &rhs) | ||||||
| { | { | ||||||
|     Lattice<vInteger> ret(rhs._grid); |   Lattice<vPredicate> ret(rhs.Grid()); | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |   autoView( rhs_v, rhs, CpuRead); | ||||||
|       ret._odata[ss]=op(lhs._odata[ss],rhs); |   autoView( ret_v, ret, CpuWrite); | ||||||
|     } |   thread_for( ss, rhs_v.size(), { | ||||||
|  |     ret_v[ss]=op(lhs,rhs_v[ss]); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|    |    | ||||||
| @@ -82,88 +92,88 @@ namespace Grid { | |||||||
| ////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////// | ||||||
| // Less than | // Less than | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator < (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator < (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(vlt<lobj,robj>(),lhs,rhs); |   return LLComparison(vlt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator < (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator < (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(vlt<lobj,robj>(),lhs,rhs); |   return LSComparison(vlt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator < (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator < (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(vlt<lobj,robj>(),lhs,rhs); |   return SLComparison(vlt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
|    |    | ||||||
| // Less than equal | // Less than equal | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator <= (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator <= (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(vle<lobj,robj>(),lhs,rhs); |   return LLComparison(vle<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator <= (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator <= (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(vle<lobj,robj>(),lhs,rhs); |   return LSComparison(vle<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator <= (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator <= (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(vle<lobj,robj>(),lhs,rhs); |   return SLComparison(vle<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
|    |    | ||||||
| // Greater than  | // Greater than  | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator > (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator > (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(vgt<lobj,robj>(),lhs,rhs); |   return LLComparison(vgt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator > (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator > (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(vgt<lobj,robj>(),lhs,rhs); |   return LSComparison(vgt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|     inline Lattice<vInteger> operator > (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator > (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(vgt<lobj,robj>(),lhs,rhs); |   return SLComparison(vgt<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
|    |    | ||||||
|    |    | ||||||
| // Greater than equal | // Greater than equal | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator >= (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator >= (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(vge<lobj,robj>(),lhs,rhs); |   return LLComparison(vge<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|    inline Lattice<vInteger> operator >= (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator >= (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(vge<lobj,robj>(),lhs,rhs); |   return LSComparison(vge<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator >= (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator >= (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(vge<lobj,robj>(),lhs,rhs); |   return SLComparison(vge<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
|     |     | ||||||
| // equal | // equal | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator == (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator == (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(veq<lobj,robj>(),lhs,rhs); |   return LLComparison(veq<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator == (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator == (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(veq<lobj,robj>(),lhs,rhs); |   return LSComparison(veq<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator == (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator == (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(veq<lobj,robj>(),lhs,rhs); |   return SLComparison(veq<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
|     |     | ||||||
|     |     | ||||||
| // not equal | // not equal | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator != (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator != (const Lattice<lobj> & lhs, const Lattice<robj> & rhs) { | ||||||
|   return LLComparison(vne<lobj,robj>(),lhs,rhs); |   return LLComparison(vne<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator != (const Lattice<lobj> & lhs, const robj & rhs) { | inline Lattice<vPredicate> operator != (const Lattice<lobj> & lhs, const robj & rhs) { | ||||||
|   return LSComparison(vne<lobj,robj>(),lhs,rhs); |   return LSComparison(vne<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| template<class lobj,class robj> | template<class lobj,class robj> | ||||||
|      inline Lattice<vInteger> operator != (const lobj & lhs, const Lattice<robj> & rhs) { | inline Lattice<vPredicate> operator != (const lobj & lhs, const Lattice<robj> & rhs) { | ||||||
|   return SLComparison(vne<lobj,robj>(),lhs,rhs); |   return SLComparison(vne<lobj,robj>(),lhs,rhs); | ||||||
| } | } | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -26,10 +26,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #ifndef GRID_COMPARISON_H |  | ||||||
| #define GRID_COMPARISON_H |  | ||||||
|  |  | ||||||
| namespace Grid { | #pragma once | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|   ///////////////////////////////////////// |   ///////////////////////////////////////// | ||||||
|   // This implementation is a bit poor. |   // This implementation is a bit poor. | ||||||
| @@ -44,42 +44,42 @@ namespace Grid { | |||||||
|   // |   // | ||||||
|   template<class lobj,class robj> class veq { |   template<class lobj,class robj> class veq { | ||||||
|   public: |   public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) == (rhs); |       return (lhs) == (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class vne { |   template<class lobj,class robj> class vne { | ||||||
|   public: |   public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) != (rhs); |       return (lhs) != (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class vlt { |   template<class lobj,class robj> class vlt { | ||||||
|   public: |   public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) < (rhs); |       return (lhs) < (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class vle { |   template<class lobj,class robj> class vle { | ||||||
|   public: |   public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) <= (rhs); |       return (lhs) <= (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class vgt { |   template<class lobj,class robj> class vgt { | ||||||
|   public: |   public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) > (rhs); |       return (lhs) > (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class vge { |   template<class lobj,class robj> class vge { | ||||||
|     public: |     public: | ||||||
|     vInteger operator()(const lobj &lhs, const robj &rhs) |     accelerator vInteger operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) >= (rhs); |       return (lhs) >= (rhs); | ||||||
|     } |     } | ||||||
| @@ -88,42 +88,42 @@ namespace Grid { | |||||||
|   // Generic list of functors |   // Generic list of functors | ||||||
|   template<class lobj,class robj> class seq { |   template<class lobj,class robj> class seq { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) == (rhs); |       return (lhs) == (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class sne { |   template<class lobj,class robj> class sne { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) != (rhs); |       return (lhs) != (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class slt { |   template<class lobj,class robj> class slt { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) < (rhs); |       return (lhs) < (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class sle { |   template<class lobj,class robj> class sle { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) <= (rhs); |       return (lhs) <= (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class sgt { |   template<class lobj,class robj> class sgt { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) > (rhs); |       return (lhs) > (rhs); | ||||||
|     } |     } | ||||||
|   }; |   }; | ||||||
|   template<class lobj,class robj> class sge { |   template<class lobj,class robj> class sge { | ||||||
|   public: |   public: | ||||||
|     Integer operator()(const lobj &lhs, const robj &rhs) |     accelerator Integer operator()(const lobj &lhs, const robj &rhs) | ||||||
|     {  |     {  | ||||||
|       return (lhs) >= (rhs); |       return (lhs) >= (rhs); | ||||||
|     } |     } | ||||||
| @@ -133,12 +133,12 @@ namespace Grid { | |||||||
|   // Integer and real get extra relational functions. |   // Integer and real get extra relational functions. | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// |   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  |   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  | ||||||
|     inline vInteger Comparison(sfunctor sop,const vsimd & lhs, const vsimd & rhs) |     accelerator_inline vInteger Comparison(sfunctor sop,const vsimd & lhs, const vsimd & rhs) | ||||||
|     { |     { | ||||||
|       typedef typename vsimd::scalar_type scalar; |       typedef typename vsimd::scalar_type scalar; | ||||||
|       std::vector<scalar> vlhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation |       ExtractBuffer<scalar> vlhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation | ||||||
|       std::vector<scalar> vrhs(vsimd::Nsimd()); |       ExtractBuffer<scalar> vrhs(vsimd::Nsimd()); | ||||||
|       std::vector<Integer> vpred(vsimd::Nsimd()); |       ExtractBuffer<Integer> vpred(vsimd::Nsimd()); | ||||||
|       vInteger ret; |       vInteger ret; | ||||||
|       extract<vsimd,scalar>(lhs,vlhs); |       extract<vsimd,scalar>(lhs,vlhs); | ||||||
|       extract<vsimd,scalar>(rhs,vrhs); |       extract<vsimd,scalar>(rhs,vrhs); | ||||||
| @@ -150,11 +150,11 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|  |  | ||||||
|   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  |   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  | ||||||
|     inline vInteger Comparison(sfunctor sop,const vsimd & lhs, const typename vsimd::scalar_type & rhs) |     accelerator_inline vInteger Comparison(sfunctor sop,const vsimd & lhs, const typename vsimd::scalar_type & rhs) | ||||||
|     { |     { | ||||||
|       typedef typename vsimd::scalar_type scalar; |       typedef typename vsimd::scalar_type scalar; | ||||||
|       std::vector<scalar> vlhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation |       ExtractBuffer<scalar> vlhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation | ||||||
|       std::vector<Integer> vpred(vsimd::Nsimd()); |       ExtractBuffer<Integer> vpred(vsimd::Nsimd()); | ||||||
|       vInteger ret; |       vInteger ret; | ||||||
|       extract<vsimd,scalar>(lhs,vlhs); |       extract<vsimd,scalar>(lhs,vlhs); | ||||||
|       for(int s=0;s<vsimd::Nsimd();s++){ |       for(int s=0;s<vsimd::Nsimd();s++){ | ||||||
| @@ -165,11 +165,11 @@ namespace Grid { | |||||||
|     } |     } | ||||||
|  |  | ||||||
|   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  |   template<class sfunctor, class vsimd,IfNotComplex<vsimd> = 0>  | ||||||
|     inline vInteger Comparison(sfunctor sop,const typename vsimd::scalar_type & lhs, const vsimd & rhs) |     accelerator_inline vInteger Comparison(sfunctor sop,const typename vsimd::scalar_type & lhs, const vsimd & rhs) | ||||||
|     { |     { | ||||||
|       typedef typename vsimd::scalar_type scalar; |       typedef typename vsimd::scalar_type scalar; | ||||||
|       std::vector<scalar> vrhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation |       ExtractBuffer<scalar> vrhs(vsimd::Nsimd());   // Use functors to reduce this to single implementation | ||||||
|       std::vector<Integer> vpred(vsimd::Nsimd()); |       ExtractBuffer<Integer> vpred(vsimd::Nsimd()); | ||||||
|       vInteger ret; |       vInteger ret; | ||||||
|       extract<vsimd,scalar>(rhs,vrhs); |       extract<vsimd,scalar>(rhs,vrhs); | ||||||
|       for(int s=0;s<vsimd::Nsimd();s++){ |       for(int s=0;s<vsimd::Nsimd();s++){ | ||||||
| @@ -181,30 +181,30 @@ namespace Grid { | |||||||
|  |  | ||||||
| #define DECLARE_RELATIONAL_EQ(op,functor) \ | #define DECLARE_RELATIONAL_EQ(op,functor) \ | ||||||
|   template<class vsimd,IfSimd<vsimd> = 0>\ |   template<class vsimd,IfSimd<vsimd> = 0>\ | ||||||
|     inline vInteger operator op (const vsimd & lhs, const vsimd & rhs)\ |     accelerator_inline vInteger operator op (const vsimd & lhs, const vsimd & rhs)\ | ||||||
|     {\ |     {\ | ||||||
|       typedef typename vsimd::scalar_type scalar;\ |       typedef typename vsimd::scalar_type scalar;\ | ||||||
|       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ |       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ | ||||||
|     }\ |     }\ | ||||||
|   template<class vsimd,IfSimd<vsimd> = 0>\ |   template<class vsimd,IfSimd<vsimd> = 0>\ | ||||||
|     inline vInteger operator op (const vsimd & lhs, const typename vsimd::scalar_type & rhs) \ |     accelerator_inline vInteger operator op (const vsimd & lhs, const typename vsimd::scalar_type & rhs) \ | ||||||
|     {\ |     {\ | ||||||
|       typedef typename vsimd::scalar_type scalar;\ |       typedef typename vsimd::scalar_type scalar;\ | ||||||
|       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ |       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ | ||||||
|     }\ |     }\ | ||||||
|   template<class vsimd,IfSimd<vsimd> = 0>\ |   template<class vsimd,IfSimd<vsimd> = 0>\ | ||||||
|     inline vInteger operator op (const typename vsimd::scalar_type & lhs, const vsimd & rhs) \ |     accelerator_inline vInteger operator op (const typename vsimd::scalar_type & lhs, const vsimd & rhs) \ | ||||||
|     {\ |     {\ | ||||||
|       typedef typename vsimd::scalar_type scalar;\ |       typedef typename vsimd::scalar_type scalar;\ | ||||||
|       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ |       return Comparison(functor<scalar,scalar>(),lhs,rhs);\ | ||||||
|     }\ |     }\ | ||||||
|   template<class vsimd>\ |   template<class vsimd>\ | ||||||
|     inline vInteger operator op(const iScalar<vsimd> &lhs,const typename vsimd::scalar_type &rhs) \ |     accelerator_inline vInteger operator op(const iScalar<vsimd> &lhs,const typename vsimd::scalar_type &rhs) \ | ||||||
|     {									\ |     {									\ | ||||||
|       return lhs._internal op rhs;					\ |       return lhs._internal op rhs;					\ | ||||||
|     }									\ |     }									\ | ||||||
|   template<class vsimd>\ |   template<class vsimd>\ | ||||||
|     inline vInteger operator op(const typename vsimd::scalar_type &lhs,const iScalar<vsimd> &rhs) \ |     accelerator_inline vInteger operator op(const typename vsimd::scalar_type &lhs,const iScalar<vsimd> &rhs) \ | ||||||
|     {									\ |     {									\ | ||||||
|       return lhs op rhs._internal;					\ |       return lhs op rhs._internal;					\ | ||||||
|     }									\ |     }									\ | ||||||
| @@ -212,7 +212,7 @@ namespace Grid { | |||||||
| #define DECLARE_RELATIONAL(op,functor) \ | #define DECLARE_RELATIONAL(op,functor) \ | ||||||
|   DECLARE_RELATIONAL_EQ(op,functor)    \ |   DECLARE_RELATIONAL_EQ(op,functor)    \ | ||||||
|   template<class vsimd>\ |   template<class vsimd>\ | ||||||
|     inline vInteger operator op(const iScalar<vsimd> &lhs,const iScalar<vsimd> &rhs)\ |     accelerator_inline vInteger operator op(const iScalar<vsimd> &lhs,const iScalar<vsimd> &rhs)\ | ||||||
|     {									\ |     {									\ | ||||||
|       return lhs._internal op rhs._internal;				\ |       return lhs._internal op rhs._internal;				\ | ||||||
|     }									 |     }									 | ||||||
| @@ -226,7 +226,7 @@ DECLARE_RELATIONAL(!=,sne); | |||||||
|  |  | ||||||
| #undef DECLARE_RELATIONAL | #undef DECLARE_RELATIONAL | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
| #endif |  | ||||||
|   | |||||||
| @@ -28,13 +28,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| #ifndef GRID_LATTICE_CONFORMABLE_H | #ifndef GRID_LATTICE_CONFORMABLE_H | ||||||
| #define GRID_LATTICE_CONFORMABLE_H | #define GRID_LATTICE_CONFORMABLE_H | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| template<class obj1,class obj2> void conformable(const Lattice<obj1> &lhs,const Lattice<obj2> &rhs) | template<class obj1,class obj2> void conformable(const Lattice<obj1> &lhs,const Lattice<obj2> &rhs) | ||||||
| { | { | ||||||
|         assert(lhs._grid == rhs._grid); |   assert(lhs.Grid() == rhs.Grid()); | ||||||
|         assert(lhs.checkerboard == rhs.checkerboard); |   assert(lhs.Checkerboard() == rhs.Checkerboard()); | ||||||
| } | } | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -25,32 +25,31 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
| *************************************************************************************/ | *************************************************************************************/ | ||||||
| /*  END LEGAL */ | /*  END LEGAL */ | ||||||
| #ifndef GRID_LATTICE_COORDINATE_H | #pragma once  | ||||||
| #define GRID_LATTICE_COORDINATE_H |  | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | template<class iobj> inline void LatticeCoordinate(Lattice<iobj> &l,int mu) | ||||||
| { | { | ||||||
|   typedef typename iobj::scalar_type scalar_type; |   typedef typename iobj::scalar_type scalar_type; | ||||||
|   typedef typename iobj::vector_type vector_type; |   typedef typename iobj::vector_type vector_type; | ||||||
|  |  | ||||||
|       GridBase *grid = l._grid; |   GridBase *grid = l.Grid(); | ||||||
|   int Nsimd = grid->iSites(); |   int Nsimd = grid->iSites(); | ||||||
|  |  | ||||||
|       std::vector<int> gcoor; |   autoView(l_v, l, CpuWrite); | ||||||
|       std::vector<scalar_type> mergebuf(Nsimd); |   thread_for( o, grid->oSites(), { | ||||||
|  |  | ||||||
|     vector_type vI; |     vector_type vI; | ||||||
|       for(int o=0;o<grid->oSites();o++){ |     Coordinate gcoor; | ||||||
|  |     ExtractBuffer<scalar_type> mergebuf(Nsimd); | ||||||
|     for(int i=0;i<grid->iSites();i++){ |     for(int i=0;i<grid->iSites();i++){ | ||||||
|       grid->RankIndexToGlobalCoor(grid->ThisRank(),o,i,gcoor); |       grid->RankIndexToGlobalCoor(grid->ThisRank(),o,i,gcoor); | ||||||
|       mergebuf[i]=(Integer)gcoor[mu]; |       mergebuf[i]=(Integer)gcoor[mu]; | ||||||
|     } |     } | ||||||
|     merge<vector_type,scalar_type>(vI,mergebuf); |     merge<vector_type,scalar_type>(vI,mergebuf); | ||||||
| 	l._odata[o]=vI; |     l_v[o]=vI; | ||||||
|       } |   }); | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif |  | ||||||
|   | |||||||
| @@ -32,7 +32,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | |||||||
| // localInner, localNorm, outerProduct | // localInner, localNorm, outerProduct | ||||||
| /////////////////////////////////////////////// | /////////////////////////////////////////////// | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| ///////////////////////////////////////////////////// | ///////////////////////////////////////////////////// | ||||||
| // Non site, reduced locally reduced routines | // Non site, reduced locally reduced routines | ||||||
| @@ -42,10 +42,12 @@ namespace Grid { | |||||||
| template<class vobj> | template<class vobj> | ||||||
| inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced> | inline auto localNorm2 (const Lattice<vobj> &rhs)-> Lattice<typename vobj::tensor_reduced> | ||||||
| { | { | ||||||
|       Lattice<typename vobj::tensor_reduced> ret(rhs._grid); |   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||||
|       parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
| 	ret._odata[ss]=innerProduct(rhs._odata[ss],rhs._odata[ss]); |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|       } |   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||||
|  |     coalescedWrite(ret_v[ss],innerProduct(rhs_v(ss),rhs_v(ss))); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|    |    | ||||||
| @@ -53,23 +55,33 @@ namespace Grid { | |||||||
| template<class vobj> | template<class vobj> | ||||||
| inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced> | inline auto localInnerProduct (const Lattice<vobj> &lhs,const Lattice<vobj> &rhs) -> Lattice<typename vobj::tensor_reduced> | ||||||
| { | { | ||||||
|       Lattice<typename vobj::tensor_reduced> ret(rhs._grid); |   Lattice<typename vobj::tensor_reduced> ret(rhs.Grid()); | ||||||
|       parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
| 	ret._odata[ss]=innerProduct(lhs._odata[ss],rhs._odata[ss]); |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|       } |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|  |   accelerator_for(ss,rhs_v.size(),vobj::Nsimd(),{ | ||||||
|  |     coalescedWrite(ret_v[ss],innerProduct(lhs_v(ss),rhs_v(ss))); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
|    |    | ||||||
| // outerProduct Scalar x Scalar -> Scalar | // outerProduct Scalar x Scalar -> Scalar | ||||||
| //              Vector x Vector -> Matrix | //              Vector x Vector -> Matrix | ||||||
| template<class ll,class rr> | template<class ll,class rr> | ||||||
|     inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Lattice<decltype(outerProduct(lhs._odata[0],rhs._odata[0]))> | inline auto outerProduct (const Lattice<ll> &lhs,const Lattice<rr> &rhs) -> Lattice<decltype(outerProduct(ll(),rr()))> | ||||||
| { | { | ||||||
|     Lattice<decltype(outerProduct(lhs._odata[0],rhs._odata[0]))> ret(rhs._grid); |   typedef decltype(coalescedRead(ll())) sll; | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |   typedef decltype(coalescedRead(rr())) srr; | ||||||
|       ret._odata[ss]=outerProduct(lhs._odata[ss],rhs._odata[ss]); |   Lattice<decltype(outerProduct(ll(),rr()))> ret(rhs.Grid()); | ||||||
|     } |   autoView( lhs_v , lhs, AcceleratorRead); | ||||||
|  |   autoView( rhs_v , rhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v , ret, AcceleratorWrite); | ||||||
|  |   accelerator_for(ss,rhs_v.size(),1,{ | ||||||
|  |     // FIXME had issues with scalar version of outer  | ||||||
|  |     // Use vector [] operator and don't read coalesce this loop | ||||||
|  |     ret_v[ss]=outerProduct(lhs_v[ss],rhs_v[ss]); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| } | } | ||||||
| } | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|   | |||||||
							
								
								
									
										202
									
								
								Grid/lattice/Lattice_matrix_reduction.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										202
									
								
								Grid/lattice/Lattice_matrix_reduction.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,202 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |     Source file: ./lib/lattice/Lattice_reduction.h | ||||||
|  |     Copyright (C) 2015 | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #pragma once  | ||||||
|  | #include <Grid/Grid_Eigen_Dense.h> | ||||||
|  |  | ||||||
|  | #ifdef GRID_WARN_SUBOPTIMAL | ||||||
|  | #warning "Optimisation alert all these reduction loops are NOT threaded " | ||||||
|  | #endif      | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,const Lattice<vobj> &Y,int Orthog,RealD scale=1.0)  | ||||||
|  | {     | ||||||
|  |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|  |   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||||
|  |  | ||||||
|  |   GridBase *FullGrid  = X.Grid(); | ||||||
|  |   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); | ||||||
|  |  | ||||||
|  |   //  Lattice<vobj> Xslice(SliceGrid); | ||||||
|  |   //  Lattice<vobj> Rslice(SliceGrid); | ||||||
|  |  | ||||||
|  |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|  |  | ||||||
|  |   //FIXME package in a convenient iterator | ||||||
|  |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
|  |   int stride=FullGrid->_slice_stride[Orthog]; | ||||||
|  |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|  |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|  |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |   autoView( X_v , X, CpuRead); | ||||||
|  |   autoView( Y_v , Y, CpuRead); | ||||||
|  |   autoView( R_v , R, CpuWrite); | ||||||
|  |   thread_region | ||||||
|  |   { | ||||||
|  |     std::vector<vobj> s_x(Nblock); | ||||||
|  |  | ||||||
|  |     thread_loop_collapse2( (int n=0;n<nblock;n++),{ | ||||||
|  |       for(int b=0;b<block;b++){ | ||||||
|  | 	int o  = n*stride + b; | ||||||
|  |  | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  s_x[i] = X_v[o+i*ostride]; | ||||||
|  | 	} | ||||||
|  |  | ||||||
|  | 	vobj dot; | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  dot = Y_v[o+i*ostride]; | ||||||
|  | 	  for(int j=0;j<Nblock;j++){ | ||||||
|  | 	    dot = dot + s_x[j]*(scale*aa(j,i)); | ||||||
|  | 	  } | ||||||
|  | 	  R_v[o+i*ostride]=dot; | ||||||
|  | 	} | ||||||
|  |       }}); | ||||||
|  |   } | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice<vobj> &X,int Orthog,RealD scale=1.0)  | ||||||
|  | {     | ||||||
|  |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|  |   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||||
|  |  | ||||||
|  |   GridBase *FullGrid  = X.Grid(); | ||||||
|  |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|  |  | ||||||
|  |   //FIXME package in a convenient iterator | ||||||
|  |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
|  |   int stride=FullGrid->_slice_stride[Orthog]; | ||||||
|  |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|  |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|  |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |  | ||||||
|  |   autoView( X_v , X, CpuRead); | ||||||
|  |   autoView( R_v , R, CpuWrite); | ||||||
|  |  | ||||||
|  |   thread_region | ||||||
|  |   { | ||||||
|  |     std::vector<vobj> s_x(Nblock); | ||||||
|  |      | ||||||
|  |     thread_loop_collapse2( (int n=0;n<nblock;n++),{ | ||||||
|  |       for(int b=0;b<block;b++){ | ||||||
|  | 	int o  = n*stride + b; | ||||||
|  |  | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  s_x[i] = X_v[o+i*ostride]; | ||||||
|  | 	} | ||||||
|  |  | ||||||
|  | 	vobj dot; | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  dot = s_x[0]*(scale*aa(0,i)); | ||||||
|  | 	  for(int j=1;j<Nblock;j++){ | ||||||
|  | 	    dot = dot + s_x[j]*(scale*aa(j,i)); | ||||||
|  | 	  } | ||||||
|  | 	  R_v[o+i*ostride]=dot; | ||||||
|  | 	} | ||||||
|  |     }}); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  | }; | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int Orthog)  | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |   typedef typename vobj::vector_type vector_type; | ||||||
|  |    | ||||||
|  |   GridBase *FullGrid  = lhs.Grid(); | ||||||
|  |   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); | ||||||
|  |    | ||||||
|  |   int Nblock = FullGrid->GlobalDimensions()[Orthog]; | ||||||
|  |    | ||||||
|  |   //  Lattice<vobj> Lslice(SliceGrid); | ||||||
|  |   //  Lattice<vobj> Rslice(SliceGrid); | ||||||
|  |    | ||||||
|  |   mat = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||||
|  |  | ||||||
|  |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|  |   //  int nh =  FullGrid->_ndimension; | ||||||
|  |   //  int nl = SliceGrid->_ndimension; | ||||||
|  |   //  int nl = nh-1; | ||||||
|  |  | ||||||
|  |   //FIXME package in a convenient iterator | ||||||
|  |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
|  |   int stride=FullGrid->_slice_stride[Orthog]; | ||||||
|  |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|  |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|  |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
|  |  | ||||||
|  |   typedef typename vobj::vector_typeD vector_typeD; | ||||||
|  |   autoView( lhs_v , lhs, CpuRead); | ||||||
|  |   autoView( rhs_v , rhs, CpuRead); | ||||||
|  |   thread_region { | ||||||
|  |     std::vector<vobj> Left(Nblock); | ||||||
|  |     std::vector<vobj> Right(Nblock); | ||||||
|  |     Eigen::MatrixXcd  mat_thread = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||||
|  |  | ||||||
|  |     thread_loop_collapse2((int n=0;n<nblock;n++),{ | ||||||
|  |       for(int b=0;b<block;b++){ | ||||||
|  |  | ||||||
|  | 	int o  = n*stride + b; | ||||||
|  |  | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  Left [i] = lhs_v[o+i*ostride]; | ||||||
|  | 	  Right[i] = rhs_v[o+i*ostride]; | ||||||
|  | 	} | ||||||
|  |  | ||||||
|  | 	for(int i=0;i<Nblock;i++){ | ||||||
|  | 	  for(int j=0;j<Nblock;j++){ | ||||||
|  | 	    auto tmp = innerProduct(Left[i],Right[j]); | ||||||
|  | 	    auto rtmp = TensorRemove(tmp); | ||||||
|  | 	    ComplexD z = Reduce(rtmp); | ||||||
|  | 	    mat_thread(i,j) += std::complex<double>(real(z),imag(z)); | ||||||
|  | 	  }} | ||||||
|  |     }}); | ||||||
|  |     thread_critical { | ||||||
|  |       mat += mat_thread; | ||||||
|  |     }   | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   for(int i=0;i<Nblock;i++){ | ||||||
|  |     for(int j=0;j<Nblock;j++){ | ||||||
|  |       ComplexD sum = mat(i,j); | ||||||
|  |       FullGrid->GlobalSum(sum); | ||||||
|  |       mat(i,j)=sum; | ||||||
|  |     }} | ||||||
|  |  | ||||||
|  |   return; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
| @@ -1,138 +0,0 @@ | |||||||
|     /************************************************************************************* |  | ||||||
|  |  | ||||||
|     Grid physics library, www.github.com/paboyle/Grid  |  | ||||||
|  |  | ||||||
|     Source file: ./lib/lattice/Lattice_overload.h |  | ||||||
|  |  | ||||||
|     Copyright (C) 2015 |  | ||||||
|  |  | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> |  | ||||||
|  |  | ||||||
|     This program is free software; you can redistribute it and/or modify |  | ||||||
|     it under the terms of the GNU General Public License as published by |  | ||||||
|     the Free Software Foundation; either version 2 of the License, or |  | ||||||
|     (at your option) any later version. |  | ||||||
|  |  | ||||||
|     This program is distributed in the hope that it will be useful, |  | ||||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of |  | ||||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the |  | ||||||
|     GNU General Public License for more details. |  | ||||||
|  |  | ||||||
|     You should have received a copy of the GNU General Public License along |  | ||||||
|     with this program; if not, write to the Free Software Foundation, Inc., |  | ||||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. |  | ||||||
|  |  | ||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |  | ||||||
|     *************************************************************************************/ |  | ||||||
|     /*  END LEGAL */ |  | ||||||
| #ifndef GRID_LATTICE_OVERLOAD_H |  | ||||||
| #define GRID_LATTICE_OVERLOAD_H |  | ||||||
|  |  | ||||||
| namespace Grid { |  | ||||||
|  |  | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   // unary negation |  | ||||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   template<class vobj> |  | ||||||
|   inline Lattice<vobj> operator -(const Lattice<vobj> &r) |  | ||||||
|   { |  | ||||||
|     Lattice<vobj> ret(r._grid); |  | ||||||
|     parallel_for(int ss=0;ss<r._grid->oSites();ss++){ |  | ||||||
|       vstream(ret._odata[ss], -r._odata[ss]); |  | ||||||
|     } |  | ||||||
|     return ret; |  | ||||||
|   }  |  | ||||||
|   ///////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   // Lattice BinOp Lattice, |  | ||||||
|   //NB mult performs conformable check. Do not reapply here for performance. |  | ||||||
|   ///////////////////////////////////////////////////////////////////////////////////// |  | ||||||
|   template<class left,class right> |  | ||||||
|     inline auto operator * (const Lattice<left> &lhs,const Lattice<right> &rhs)-> Lattice<decltype(lhs._odata[0]*rhs._odata[0])> |  | ||||||
|   { |  | ||||||
|     Lattice<decltype(lhs._odata[0]*rhs._odata[0])> ret(rhs._grid); |  | ||||||
|     mult(ret,lhs,rhs); |  | ||||||
|     return ret; |  | ||||||
|   } |  | ||||||
|   template<class left,class right> |  | ||||||
|     inline auto operator + (const Lattice<left> &lhs,const Lattice<right> &rhs)-> Lattice<decltype(lhs._odata[0]+rhs._odata[0])> |  | ||||||
|   { |  | ||||||
|     Lattice<decltype(lhs._odata[0]+rhs._odata[0])> ret(rhs._grid); |  | ||||||
|     add(ret,lhs,rhs); |  | ||||||
|     return ret; |  | ||||||
|   } |  | ||||||
|   template<class left,class right> |  | ||||||
|     inline auto operator - (const Lattice<left> &lhs,const Lattice<right> &rhs)-> Lattice<decltype(lhs._odata[0]-rhs._odata[0])> |  | ||||||
|   { |  | ||||||
|     Lattice<decltype(lhs._odata[0]-rhs._odata[0])> ret(rhs._grid); |  | ||||||
|     sub(ret,lhs,rhs); |  | ||||||
|     return ret; |  | ||||||
|   } |  | ||||||
|    |  | ||||||
|   // Scalar BinOp Lattice ;generate return type |  | ||||||
|   template<class left,class right> |  | ||||||
|   inline auto operator * (const left &lhs,const Lattice<right> &rhs) -> Lattice<decltype(lhs*rhs._odata[0])> |  | ||||||
|   { |  | ||||||
|     Lattice<decltype(lhs*rhs._odata[0])> ret(rhs._grid); |  | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |  | ||||||
|       decltype(lhs*rhs._odata[0]) tmp=lhs*rhs._odata[ss];  |  | ||||||
|       vstream(ret._odata[ss],tmp); |  | ||||||
| 	   //      ret._odata[ss]=lhs*rhs._odata[ss]; |  | ||||||
|     } |  | ||||||
|     return ret; |  | ||||||
|   } |  | ||||||
|   template<class left,class right> |  | ||||||
|     inline auto operator + (const left &lhs,const Lattice<right> &rhs) -> Lattice<decltype(lhs+rhs._odata[0])> |  | ||||||
|     { |  | ||||||
|       Lattice<decltype(lhs+rhs._odata[0])> ret(rhs._grid); |  | ||||||
|       parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |  | ||||||
| 	decltype(lhs+rhs._odata[0]) tmp =lhs-rhs._odata[ss];   |  | ||||||
| 	vstream(ret._odata[ss],tmp); |  | ||||||
| 	//	ret._odata[ss]=lhs+rhs._odata[ss]; |  | ||||||
|       } |  | ||||||
|         return ret; |  | ||||||
|     } |  | ||||||
|   template<class left,class right> |  | ||||||
|     inline auto operator - (const left &lhs,const Lattice<right> &rhs) -> Lattice<decltype(lhs-rhs._odata[0])> |  | ||||||
|   { |  | ||||||
|     Lattice<decltype(lhs-rhs._odata[0])> ret(rhs._grid); |  | ||||||
|     parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |  | ||||||
|       decltype(lhs-rhs._odata[0]) tmp=lhs-rhs._odata[ss];   |  | ||||||
|       vstream(ret._odata[ss],tmp); |  | ||||||
|     } |  | ||||||
|     return ret; |  | ||||||
|   } |  | ||||||
|     template<class left,class right> |  | ||||||
|       inline auto operator * (const Lattice<left> &lhs,const right &rhs) -> Lattice<decltype(lhs._odata[0]*rhs)> |  | ||||||
|     { |  | ||||||
|       Lattice<decltype(lhs._odata[0]*rhs)> ret(lhs._grid); |  | ||||||
|       parallel_for(int ss=0;ss<lhs._grid->oSites(); ss++){ |  | ||||||
| 	decltype(lhs._odata[0]*rhs) tmp =lhs._odata[ss]*rhs; |  | ||||||
| 	vstream(ret._odata[ss],tmp); |  | ||||||
| 	//            ret._odata[ss]=lhs._odata[ss]*rhs; |  | ||||||
|       } |  | ||||||
|       return ret; |  | ||||||
|     } |  | ||||||
|     template<class left,class right> |  | ||||||
|       inline auto operator + (const Lattice<left> &lhs,const right &rhs) -> Lattice<decltype(lhs._odata[0]+rhs)> |  | ||||||
|     { |  | ||||||
|         Lattice<decltype(lhs._odata[0]+rhs)> ret(lhs._grid); |  | ||||||
| 	parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |  | ||||||
| 	  decltype(lhs._odata[0]+rhs) tmp=lhs._odata[ss]+rhs;  |  | ||||||
| 	  vstream(ret._odata[ss],tmp); |  | ||||||
| 	  //	  ret._odata[ss]=lhs._odata[ss]+rhs; |  | ||||||
|         } |  | ||||||
|         return ret; |  | ||||||
|     } |  | ||||||
|     template<class left,class right> |  | ||||||
|       inline auto operator - (const Lattice<left> &lhs,const right &rhs) -> Lattice<decltype(lhs._odata[0]-rhs)> |  | ||||||
|     { |  | ||||||
|       Lattice<decltype(lhs._odata[0]-rhs)> ret(lhs._grid); |  | ||||||
|       parallel_for(int ss=0;ss<rhs._grid->oSites(); ss++){ |  | ||||||
| 	  decltype(lhs._odata[0]-rhs) tmp=lhs._odata[ss]-rhs; |  | ||||||
| 	  vstream(ret._odata[ss],tmp); |  | ||||||
| 	  //	ret._odata[ss]=lhs._odata[ss]-rhs; |  | ||||||
|       } |  | ||||||
|       return ret; |  | ||||||
|     } |  | ||||||
| } |  | ||||||
| #endif |  | ||||||
| @@ -34,29 +34,35 @@ Author: Peter Boyle <peterboyle@Peters-MacBook-Pro-2.local> | |||||||
| // Peeking and poking around | // Peeking and poking around | ||||||
| /////////////////////////////////////////////// | /////////////////////////////////////////////// | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // FIXME accelerator_loop and accelerator_inline these | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Peek internal indices of a Lattice object | // Peek internal indices of a Lattice object | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<int Index,class vobj>  | template<int Index,class vobj>  | ||||||
|        auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Index>(lhs._odata[0],i))> | auto PeekIndex(const Lattice<vobj> &lhs,int i) -> Lattice<decltype(peekIndex<Index>(vobj(),i))> | ||||||
| { | { | ||||||
|       Lattice<decltype(peekIndex<Index>(lhs._odata[0],i))> ret(lhs._grid); |   Lattice<decltype(peekIndex<Index>(vobj(),i))> ret(lhs.Grid()); | ||||||
|       ret.checkerboard=lhs.checkerboard; |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|       parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
| 	ret._odata[ss] = peekIndex<Index>(lhs._odata[ss],i); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|       } |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
| template<int Index,class vobj>  | template<int Index,class vobj>  | ||||||
|       auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekIndex<Index>(lhs._odata[0],i,j))> | auto PeekIndex(const Lattice<vobj> &lhs,int i,int j) -> Lattice<decltype(peekIndex<Index>(vobj(),i,j))> | ||||||
| { | { | ||||||
|       Lattice<decltype(peekIndex<Index>(lhs._odata[0],i,j))> ret(lhs._grid); |   Lattice<decltype(peekIndex<Index>(vobj(),i,j))> ret(lhs.Grid()); | ||||||
|       ret.checkerboard=lhs.checkerboard; |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|       parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
| 	ret._odata[ss] = peekIndex<Index>(lhs._odata[ss],i,j); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|       } |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = peekIndex<Index>(lhs_v[ss],i,j); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -64,34 +70,38 @@ namespace Grid { | |||||||
| // Poke internal indices of a Lattice object | // Poke internal indices of a Lattice object | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<int Index,class vobj>   | template<int Index,class vobj>   | ||||||
|     void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(lhs._odata[0],0))> & rhs,int i) | void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0))> & rhs,int i) | ||||||
| { | { | ||||||
|       parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( rhs_v, rhs, AcceleratorRead); | ||||||
| 	pokeIndex<Index>(lhs._odata[ss],rhs._odata[ss],i); |   autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|       }       |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i); | ||||||
|  |   }); | ||||||
| } | } | ||||||
| template<int Index,class vobj>  | template<int Index,class vobj>  | ||||||
|       void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(lhs._odata[0],0,0))> & rhs,int i,int j) | void PokeIndex(Lattice<vobj> &lhs,const Lattice<decltype(peekIndex<Index>(vobj(),0,0))> & rhs,int i,int j) | ||||||
| { | { | ||||||
|       parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |   autoView( rhs_v, rhs, AcceleratorRead); | ||||||
| 	pokeIndex<Index>(lhs._odata[ss],rhs._odata[ss],i,j); |   autoView( lhs_v, lhs, AcceleratorWrite); | ||||||
|       }       |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     pokeIndex<Index>(lhs_v[ss],rhs_v[ss],i,j); | ||||||
|  |   }); | ||||||
| } | } | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| // Poke a scalar object into the SIMD array | // Poke a scalar object into the SIMD array | ||||||
| ////////////////////////////////////////////////////// | ////////////////////////////////////////////////////// | ||||||
| template<class vobj,class sobj>  | template<class vobj,class sobj>  | ||||||
|     void pokeSite(const sobj &s,Lattice<vobj> &l,const std::vector<int> &site){ | void pokeSite(const sobj &s,Lattice<vobj> &l,const Coordinate &site){ | ||||||
|  |  | ||||||
|       GridBase *grid=l._grid; |   GridBase *grid=l.Grid(); | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|       assert( l.checkerboard== l._grid->CheckerBoard(site)); |   assert( l.Checkerboard()== l.Grid()->CheckerBoard(site)); | ||||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); |   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||||
|  |  | ||||||
|   int rank,odx,idx; |   int rank,odx,idx; | ||||||
| @@ -99,13 +109,13 @@ namespace Grid { | |||||||
|   grid->GlobalCoorToRankIndex(rank,odx,idx,site); |   grid->GlobalCoorToRankIndex(rank,odx,idx,site); | ||||||
|   grid->Broadcast(grid->BossRank(),s); |   grid->Broadcast(grid->BossRank(),s); | ||||||
|  |  | ||||||
|       std::vector<sobj> buf(Nsimd); |  | ||||||
|  |  | ||||||
|   // extract-modify-merge cycle is easiest way and this is not perf critical |   // extract-modify-merge cycle is easiest way and this is not perf critical | ||||||
|  |   ExtractBuffer<sobj> buf(Nsimd); | ||||||
|  |   autoView( l_v , l, CpuWrite); | ||||||
|   if ( rank == grid->ThisRank() ) { |   if ( rank == grid->ThisRank() ) { | ||||||
| 	extract(l._odata[odx],buf); |     extract(l_v[odx],buf); | ||||||
|     buf[idx] = s; |     buf[idx] = s; | ||||||
| 	merge(l._odata[odx],buf); |     merge(l_v[odx],buf); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   return; |   return; | ||||||
| @@ -116,22 +126,23 @@ namespace Grid { | |||||||
| // Peek a scalar object from the SIMD array | // Peek a scalar object from the SIMD array | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
| template<class vobj,class sobj> | template<class vobj,class sobj> | ||||||
|       void peekSite(sobj &s,const Lattice<vobj> &l,const std::vector<int> &site){ | void peekSite(sobj &s,const Lattice<vobj> &l,const Coordinate &site){ | ||||||
|          |          | ||||||
|       GridBase *grid=l._grid; |   GridBase *grid=l.Grid(); | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|       assert( l.checkerboard == l._grid->CheckerBoard(site)); |   assert( l.Checkerboard() == l.Grid()->CheckerBoard(site)); | ||||||
|  |  | ||||||
|   int rank,odx,idx; |   int rank,odx,idx; | ||||||
|   grid->GlobalCoorToRankIndex(rank,odx,idx,site); |   grid->GlobalCoorToRankIndex(rank,odx,idx,site); | ||||||
|  |  | ||||||
|       std::vector<sobj> buf(Nsimd); |   ExtractBuffer<sobj> buf(Nsimd); | ||||||
|       extract(l._odata[odx],buf); |   autoView( l_v , l, CpuWrite); | ||||||
|  |   extract(l_v[odx],buf); | ||||||
|  |  | ||||||
|   s = buf[idx]; |   s = buf[idx]; | ||||||
|  |  | ||||||
| @@ -140,21 +151,21 @@ namespace Grid { | |||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
| // Peek a scalar object from the SIMD array | // Peek a scalar object from the SIMD array | ||||||
| ////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////// | ||||||
|  | // Must be CPU read view | ||||||
| template<class vobj,class sobj> | template<class vobj,class sobj> | ||||||
|     void peekLocalSite(sobj &s,const Lattice<vobj> &l,std::vector<int> &site){ | inline void peekLocalSite(sobj &s,const LatticeView<vobj> &l,Coordinate &site) | ||||||
|          | { | ||||||
|       GridBase *grid = l._grid; |   GridBase *grid = l.getGrid(); | ||||||
|  |   assert(l.mode==CpuRead); | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|       assert( l.checkerboard== l._grid->CheckerBoard(site)); |   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); |   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||||
|  |  | ||||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); |   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||||
| @@ -162,7 +173,7 @@ namespace Grid { | |||||||
|   idx= grid->iIndex(site); |   idx= grid->iIndex(site); | ||||||
|   odx= grid->oIndex(site); |   odx= grid->oIndex(site); | ||||||
|    |    | ||||||
|       scalar_type * vp = (scalar_type *)&l._odata[odx]; |   scalar_type * vp = (scalar_type *)&l[odx]; | ||||||
|   scalar_type * pt = (scalar_type *)&s; |   scalar_type * pt = (scalar_type *)&s; | ||||||
|        |        | ||||||
|   for(int w=0;w<words;w++){ |   for(int w=0;w<words;w++){ | ||||||
| @@ -171,18 +182,27 @@ namespace Grid { | |||||||
|        |        | ||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class vobj,class sobj> | template<class vobj,class sobj> | ||||||
|     void pokeLocalSite(const sobj &s,Lattice<vobj> &l,std::vector<int> &site){ | inline void peekLocalSite(sobj &s,const Lattice<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   autoView(lv,l,CpuRead); | ||||||
|  |   peekLocalSite(s,lv,site); | ||||||
|  |   return; | ||||||
|  | }; | ||||||
|  |  | ||||||
|       GridBase *grid=l._grid; | // Must be CPU write view | ||||||
|  | template<class vobj,class sobj> | ||||||
|  | inline void pokeLocalSite(const sobj &s,LatticeView<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   GridBase *grid=l.getGrid(); | ||||||
|  |   assert(l.mode==CpuWrite); | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nsimd = grid->Nsimd(); |   int Nsimd = grid->Nsimd(); | ||||||
|  |  | ||||||
|       assert( l.checkerboard== l._grid->CheckerBoard(site)); |   assert( l.Checkerboard()== grid->CheckerBoard(site)); | ||||||
|   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); |   assert( sizeof(sobj)*Nsimd == sizeof(vobj)); | ||||||
|  |  | ||||||
|   static const int words=sizeof(vobj)/sizeof(vector_type); |   static const int words=sizeof(vobj)/sizeof(vector_type); | ||||||
| @@ -190,16 +210,22 @@ namespace Grid { | |||||||
|   idx= grid->iIndex(site); |   idx= grid->iIndex(site); | ||||||
|   odx= grid->oIndex(site); |   odx= grid->oIndex(site); | ||||||
|  |  | ||||||
|       scalar_type * vp = (scalar_type *)&l._odata[odx]; |   scalar_type * vp = (scalar_type *)&l[odx]; | ||||||
|   scalar_type * pt = (scalar_type *)&s; |   scalar_type * pt = (scalar_type *)&s; | ||||||
|        |  | ||||||
|   for(int w=0;w<words;w++){ |   for(int w=0;w<words;w++){ | ||||||
|     vp[idx+w*Nsimd] = pt[w]; |     vp[idx+w*Nsimd] = pt[w]; | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   return; |   return; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| } | template<class vobj,class sobj> | ||||||
|  | inline void pokeLocalSite(const sobj &s, Lattice<vobj> &l,Coordinate &site) | ||||||
|  | { | ||||||
|  |   autoView(lv,l,CpuWrite); | ||||||
|  |   pokeLocalSite(s,lv,site); | ||||||
|  |   return; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										79
									
								
								Grid/lattice/Lattice_real_imag.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,79 @@ | |||||||
|  | /************************************************************************************* | ||||||
|  |  | ||||||
|  |     Grid physics library, www.github.com/paboyle/Grid  | ||||||
|  |  | ||||||
|  |     Source file: ./lib/lattice/Lattice_reality.h | ||||||
|  |  | ||||||
|  |     Copyright (C) 2015 | ||||||
|  |  | ||||||
|  | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
|  | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: neo <cossu@post.kek.jp> | ||||||
|  |  | ||||||
|  |     This program is free software; you can redistribute it and/or modify | ||||||
|  |     it under the terms of the GNU General Public License as published by | ||||||
|  |     the Free Software Foundation; either version 2 of the License, or | ||||||
|  |     (at your option) any later version. | ||||||
|  |  | ||||||
|  |     This program is distributed in the hope that it will be useful, | ||||||
|  |     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||||
|  |     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||||
|  |     GNU General Public License for more details. | ||||||
|  |  | ||||||
|  |     You should have received a copy of the GNU General Public License along | ||||||
|  |     with this program; if not, write to the Free Software Foundation, Inc., | ||||||
|  |     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||||
|  |  | ||||||
|  |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|  | *************************************************************************************/ | ||||||
|  | /*  END LEGAL */ | ||||||
|  | #ifndef GRID_LATTICE_REAL_IMAG_H | ||||||
|  | #define GRID_LATTICE_REAL_IMAG_H | ||||||
|  |  | ||||||
|  |  | ||||||
|  | // FIXME .. this is the sector of the code  | ||||||
|  | // I am most worried about the directions | ||||||
|  | // The choice of burying complex in the SIMD | ||||||
|  | // is making the use of "real" and "imag" very cumbersome | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | template<class vobj> inline Lattice<vobj> real(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] =real(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  | template<class vobj> inline Lattice<vobj> imag(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<vobj> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] =imag(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  |   auto real(const Expression &expr) -> decltype(real(closure(expr)))		 | ||||||
|  | {									 | ||||||
|  |   return real(closure(expr));					 | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  |   auto imag(const Expression &expr) -> decltype(imag(closure(expr)))		 | ||||||
|  | {									 | ||||||
|  |   return imag(closure(expr));					 | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
|  | #endif | ||||||
| @@ -36,22 +36,81 @@ Author: neo <cossu@post.kek.jp> | |||||||
| // The choice of burying complex in the SIMD | // The choice of burying complex in the SIMD | ||||||
| // is making the use of "real" and "imag" very cumbersome | // is making the use of "real" and "imag" very cumbersome | ||||||
|  |  | ||||||
| namespace Grid { | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
| template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){ | template<class vobj> inline Lattice<vobj> adj(const Lattice<vobj> &lhs){ | ||||||
|         Lattice<vobj> ret(lhs._grid); |   Lattice<vobj> ret(lhs.Grid()); | ||||||
| 	parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |  | ||||||
|             ret._odata[ss] = adj(lhs._odata[ss]); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|         } |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard()=lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |      ret_v[ss] = adj(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  |  | ||||||
| template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){ | template<class vobj> inline Lattice<vobj> conjugate(const Lattice<vobj> &lhs){ | ||||||
|         Lattice<vobj> ret(lhs._grid); |   Lattice<vobj> ret(lhs.Grid()); | ||||||
| 	parallel_for(int ss=0;ss<lhs._grid->oSites();ss++){ |  | ||||||
| 	  ret._odata[ss] = conjugate(lhs._odata[ss]); |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|         } |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), vobj::Nsimd(), { | ||||||
|  |     coalescedWrite( ret_v[ss] , conjugate(lhs_v(ss))); | ||||||
|  |   }); | ||||||
|   return ret; |   return ret; | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  | template<class vobj> inline Lattice<typename vobj::Complexified> toComplex(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<typename vobj::Complexified> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = toComplex(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  | template<class vobj> inline Lattice<typename vobj::Realified> toReal(const Lattice<vobj> &lhs){ | ||||||
|  |   Lattice<typename vobj::Realified> ret(lhs.Grid()); | ||||||
|  |  | ||||||
|  |   autoView( lhs_v, lhs, AcceleratorRead); | ||||||
|  |   autoView( ret_v, ret, AcceleratorWrite); | ||||||
|  |  | ||||||
|  |   ret.Checkerboard() = lhs.Checkerboard(); | ||||||
|  |   accelerator_for( ss, lhs_v.size(), 1, { | ||||||
|  |     ret_v[ss] = toReal(lhs_v[ss]); | ||||||
|  |   }); | ||||||
|  |   return ret; | ||||||
|  | }; | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto toComplex(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return toComplex(closure(expr)); | ||||||
| } | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto toReal(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return toReal(closure(expr)); | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto adj(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return adj(closure(expr)); | ||||||
|  | } | ||||||
|  | template<class Expression,typename std::enable_if<is_lattice_expr<Expression>::value,void>::type * = nullptr>  | ||||||
|  | auto conjugate(const Expression &expr)  -> decltype(closure(expr))  | ||||||
|  | { | ||||||
|  |   return conjugate(closure(expr)); | ||||||
|  | } | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
|  |  | ||||||
| #endif | #endif | ||||||
|   | |||||||
| @@ -5,6 +5,7 @@ | |||||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | Author: paboyle <paboyle@ph.ed.ac.uk> | ||||||
|  | Author: Christoph Lehner <christoph@lhnr.de> | ||||||
|     This program is free software; you can redistribute it and/or modify |     This program is free software; you can redistribute it and/or modify | ||||||
|     it under the terms of the GNU General Public License as published by |     it under the terms of the GNU General Public License as published by | ||||||
|     the Free Software Foundation; either version 2 of the License, or |     the Free Software Foundation; either version 2 of the License, or | ||||||
| @@ -19,58 +20,172 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | |||||||
|     See the full license in the file "LICENSE" in the top level distribution directory |     See the full license in the file "LICENSE" in the top level distribution directory | ||||||
|     *************************************************************************************/ |     *************************************************************************************/ | ||||||
|     /*  END LEGAL */ |     /*  END LEGAL */ | ||||||
| #ifndef GRID_LATTICE_REDUCTION_H | #pragma once | ||||||
| #define GRID_LATTICE_REDUCTION_H |  | ||||||
|  |  | ||||||
| #include <Grid/Grid_Eigen_Dense.h> | #include <Grid/Grid_Eigen_Dense.h> | ||||||
|  |  | ||||||
| namespace Grid { |  | ||||||
| #ifdef GRID_WARN_SUBOPTIMAL | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
| #warning "Optimisation alert all these reduction loops are NOT threaded " | #include <Grid/lattice/Lattice_reduction_gpu.h> | ||||||
| #endif | #endif | ||||||
|  |  | ||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | ////////////////////////////////////////////////////// | ||||||
|  | // FIXME this should promote to double and accumulate | ||||||
|  | ////////////////////////////////////////////////////// | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_object sum_cpu(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_object  sobj; | ||||||
|  |  | ||||||
|  |   //  const int Nsimd = vobj::Nsimd(); | ||||||
|  |   const int nthread = GridThread::GetThreads(); | ||||||
|  |  | ||||||
|  |   Vector<sobj> sumarray(nthread); | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     sumarray[i]=Zero(); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   thread_for(thr,nthread, { | ||||||
|  |     int nwork, mywork, myoff; | ||||||
|  |     nwork = osites; | ||||||
|  |     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||||
|  |     vobj vvsum=Zero(); | ||||||
|  |     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||||
|  |       vvsum = vvsum + arg[ss]; | ||||||
|  |     } | ||||||
|  |     sumarray[thr]=Reduce(vvsum); | ||||||
|  |   }); | ||||||
|  |    | ||||||
|  |   sobj ssum=Zero();  // sum across threads | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     ssum = ssum+sumarray[i]; | ||||||
|  |   }  | ||||||
|  |   return ssum; | ||||||
|  | } | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_objectD sumD_cpu(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_objectD  sobj; | ||||||
|  |  | ||||||
|  |   const int nthread = GridThread::GetThreads(); | ||||||
|  |  | ||||||
|  |   Vector<sobj> sumarray(nthread); | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     sumarray[i]=Zero(); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   thread_for(thr,nthread, { | ||||||
|  |     int nwork, mywork, myoff; | ||||||
|  |     nwork = osites; | ||||||
|  |     GridThread::GetWork(nwork,thr,mywork,myoff); | ||||||
|  |     vobj vvsum=Zero(); | ||||||
|  |     for(int ss=myoff;ss<mywork+myoff; ss++){ | ||||||
|  |       vvsum = vvsum + arg[ss]; | ||||||
|  |     } | ||||||
|  |     sumarray[thr]=Reduce(vvsum); | ||||||
|  |   }); | ||||||
|  |    | ||||||
|  |   sobj ssum=Zero();  // sum across threads | ||||||
|  |   for(int i=0;i<nthread;i++){ | ||||||
|  |     ssum = ssum+sumarray[i]; | ||||||
|  |   }  | ||||||
|  |    | ||||||
|  |   typedef typename vobj::scalar_object ssobj; | ||||||
|  |   ssobj ret = ssum; | ||||||
|  |   return ret; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_object sum(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|  |   return sum_gpu(arg,osites); | ||||||
|  | #else | ||||||
|  |   return sum_cpu(arg,osites); | ||||||
|  | #endif   | ||||||
|  | } | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_objectD sumD(const vobj *arg, Integer osites) | ||||||
|  | { | ||||||
|  | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|  |   return sumD_gpu(arg,osites); | ||||||
|  | #else | ||||||
|  |   return sumD_cpu(arg,osites); | ||||||
|  | #endif   | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template<class vobj> | ||||||
|  | inline typename vobj::scalar_object sum(const Lattice<vobj> &arg) | ||||||
|  | { | ||||||
|  | #if defined(GRID_CUDA)||defined(GRID_HIP) | ||||||
|  |   autoView( arg_v, arg, AcceleratorRead); | ||||||
|  |   Integer osites = arg.Grid()->oSites(); | ||||||
|  |   auto ssum= sum_gpu(&arg_v[0],osites); | ||||||
|  | #else | ||||||
|  |   autoView(arg_v, arg, CpuRead); | ||||||
|  |   Integer osites = arg.Grid()->oSites(); | ||||||
|  |   auto ssum= sum_cpu(&arg_v[0],osites); | ||||||
|  | #endif   | ||||||
|  |   arg.Grid()->GlobalSum(ssum); | ||||||
|  |   return ssum; | ||||||
|  | } | ||||||
|  |  | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // Deterministic Reduction operations | // Deterministic Reduction operations | ||||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){ | template<class vobj> inline RealD norm2(const Lattice<vobj> &arg){ | ||||||
|   auto nrm = innerProduct(arg,arg); |   ComplexD nrm = innerProduct(arg,arg); | ||||||
|   return std::real(nrm);  |   return real(nrm);  | ||||||
| } | } | ||||||
|  |  | ||||||
| // Double inner product | // Double inner product | ||||||
| template<class vobj> | template<class vobj> | ||||||
| inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | inline ComplexD rankInnerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||||
| { | { | ||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_typeD vector_type; |   typedef typename vobj::vector_typeD vector_type; | ||||||
|   GridBase *grid = left._grid; |   ComplexD  nrm; | ||||||
|   const int pad = 8; |  | ||||||
|    |    | ||||||
|   ComplexD  inner; |   GridBase *grid = left.Grid(); | ||||||
|   Vector<ComplexD> sumarray(grid->SumArraySize()*pad); |  | ||||||
|  |  | ||||||
|   parallel_for(int thr=0;thr<grid->SumArraySize();thr++){ |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|     int nwork, mywork, myoff; |   const uint64_t sites = grid->oSites(); | ||||||
|     GridThread::GetWork(left._grid->oSites(),thr,mywork,myoff); |  | ||||||
|    |    | ||||||
|     decltype(innerProductD(left._odata[0],right._odata[0])) vinner=zero; // private to thread; sub summation |   // Might make all code paths go this way. | ||||||
|     for(int ss=myoff;ss<mywork+myoff; ss++){ |   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||||
|       vinner = vinner + innerProductD(left._odata[ss],right._odata[ss]); |   Vector<inner_t> inner_tmp(sites); | ||||||
|     } |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|     // All threads sum across SIMD; reduce serial work at end |      | ||||||
|     // one write per cacheline with streaming store |   { | ||||||
|     ComplexD tmp = Reduce(TensorRemove(vinner)) ; |     autoView( left_v , left, AcceleratorRead); | ||||||
|     vstream(sumarray[thr*pad],tmp); |     autoView( right_v,right, AcceleratorRead); | ||||||
|  |  | ||||||
|  |     // GPU - SIMT lane compliance... | ||||||
|  |     accelerator_for( ss, sites, 1,{ | ||||||
|  | 	auto x_l = left_v[ss]; | ||||||
|  | 	auto y_l = right_v[ss]; | ||||||
|  | 	inner_tmp_v[ss]=innerProductD(x_l,y_l); | ||||||
|  |     }); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   inner=0.0; |   // This is in single precision and fails some tests | ||||||
|   for(int i=0;i<grid->SumArraySize();i++){ |   auto anrm = sum(inner_tmp_v,sites);   | ||||||
|     inner = inner+sumarray[i*pad]; |   nrm = anrm; | ||||||
|  |   return nrm; | ||||||
| } | } | ||||||
|   right._grid->GlobalSum(inner); |  | ||||||
|   return inner; | template<class vobj> | ||||||
|  | inline ComplexD innerProduct(const Lattice<vobj> &left,const Lattice<vobj> &right) { | ||||||
|  |   GridBase *grid = left.Grid(); | ||||||
|  |   ComplexD nrm = rankInnerProduct(left,right); | ||||||
|  |   grid->GlobalSum(nrm); | ||||||
|  |   return nrm; | ||||||
| } | } | ||||||
|  |  | ||||||
|  |  | ||||||
| ///////////////////////// | ///////////////////////// | ||||||
| // Fast axpby_norm | // Fast axpby_norm | ||||||
| // z = a x + b y | // z = a x + b y | ||||||
| @@ -86,8 +201,7 @@ axpy_norm_fast(Lattice<vobj> &z,sobj a,const Lattice<vobj> &x,const Lattice<vobj | |||||||
| template<class sobj,class vobj> strong_inline RealD  | template<class sobj,class vobj> strong_inline RealD  | ||||||
| axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y)  | axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Lattice<vobj> &y)  | ||||||
| { | { | ||||||
|   const int pad = 8; |   z.Checkerboard() = x.Checkerboard(); | ||||||
|   z.checkerboard = x.checkerboard; |  | ||||||
|   conformable(z,x); |   conformable(z,x); | ||||||
|   conformable(x,y); |   conformable(x,y); | ||||||
|  |  | ||||||
| @@ -95,43 +209,79 @@ axpby_norm_fast(Lattice<vobj> &z,sobj a,sobj b,const Lattice<vobj> &x,const Latt | |||||||
|   typedef typename vobj::vector_typeD vector_type; |   typedef typename vobj::vector_typeD vector_type; | ||||||
|   RealD  nrm; |   RealD  nrm; | ||||||
|    |    | ||||||
|   GridBase *grid = x._grid; |   GridBase *grid = x.Grid(); | ||||||
|  |  | ||||||
|   Vector<RealD> sumarray(grid->SumArraySize()*pad); |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|  |   const uint64_t sites = grid->oSites(); | ||||||
|    |    | ||||||
|   parallel_for(int thr=0;thr<grid->SumArraySize();thr++){ |   // GPU | ||||||
|     int nwork, mywork, myoff; |   autoView( x_v, x, AcceleratorRead); | ||||||
|     GridThread::GetWork(x._grid->oSites(),thr,mywork,myoff); |   autoView( y_v, y, AcceleratorRead); | ||||||
|  |   autoView( z_v, z, AcceleratorWrite); | ||||||
|  |  | ||||||
|     // private to thread; sub summation |   typedef decltype(innerProductD(x_v[0],y_v[0])) inner_t; | ||||||
|     decltype(innerProductD(z._odata[0],z._odata[0])) vnrm=zero;  |   Vector<inner_t> inner_tmp(sites); | ||||||
|     for(int ss=myoff;ss<mywork+myoff; ss++){ |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|       vobj tmp = a*x._odata[ss]+b*y._odata[ss]; |  | ||||||
|       vnrm = vnrm + innerProductD(tmp,tmp); |  | ||||||
|       vstream(z._odata[ss],tmp); |  | ||||||
|     } |  | ||||||
|     vstream(sumarray[thr*pad],real(Reduce(TensorRemove(vnrm)))) ; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   nrm = 0.0; // sum across threads; linear in thread count but fast |   accelerator_for( ss, sites, 1,{ | ||||||
|   for(int i=0;i<grid->SumArraySize();i++){ |       auto tmp = a*x_v[ss]+b*y_v[ss]; | ||||||
|     nrm = nrm+sumarray[i*pad]; |       inner_tmp_v[ss]=innerProductD(tmp,tmp); | ||||||
|   }  |       z_v[ss]=tmp; | ||||||
|   z._grid->GlobalSum(nrm); |   }); | ||||||
|  |   nrm = real(TensorRemove(sum(inner_tmp_v,sites))); | ||||||
|  |   grid->GlobalSum(nrm); | ||||||
|   return nrm;  |   return nrm;  | ||||||
| } | } | ||||||
|   |   | ||||||
|  | template<class vobj> strong_inline void | ||||||
|  | innerProductNorm(ComplexD& ip, RealD &nrm, const Lattice<vobj> &left,const Lattice<vobj> &right) | ||||||
|  | { | ||||||
|  |   conformable(left,right); | ||||||
|  |  | ||||||
|  |   typedef typename vobj::scalar_type scalar_type; | ||||||
|  |   typedef typename vobj::vector_typeD vector_type; | ||||||
|  |   Vector<ComplexD> tmp(2); | ||||||
|  |  | ||||||
|  |   GridBase *grid = left.Grid(); | ||||||
|  |  | ||||||
|  |   const uint64_t nsimd = grid->Nsimd(); | ||||||
|  |   const uint64_t sites = grid->oSites(); | ||||||
|  |  | ||||||
|  |   // GPU | ||||||
|  |   typedef decltype(innerProductD(vobj(),vobj())) inner_t; | ||||||
|  |   typedef decltype(innerProductD(vobj(),vobj())) norm_t; | ||||||
|  |   Vector<inner_t> inner_tmp(sites); | ||||||
|  |   Vector<norm_t>  norm_tmp(sites); | ||||||
|  |   auto inner_tmp_v = &inner_tmp[0]; | ||||||
|  |   auto norm_tmp_v = &norm_tmp[0]; | ||||||
|  |   { | ||||||
|  |     autoView(left_v,left, AcceleratorRead); | ||||||
|  |     autoView(right_v,right,AcceleratorRead); | ||||||
|  |     accelerator_for( ss, sites, 1,{ | ||||||
|  | 	auto left_tmp = left_v[ss]; | ||||||
|  | 	inner_tmp_v[ss]=innerProductD(left_tmp,right_v[ss]); | ||||||
|  |         norm_tmp_v [ss]=innerProductD(left_tmp,left_tmp); | ||||||
|  |       }); | ||||||
|  |   } | ||||||
|  |  | ||||||
|  |   tmp[0] = TensorRemove(sum(inner_tmp_v,sites)); | ||||||
|  |   tmp[1] = TensorRemove(sum(norm_tmp_v,sites)); | ||||||
|  |  | ||||||
|  |   grid->GlobalSumVector(&tmp[0],2); // keep norm Complex -> can use GlobalSumVector | ||||||
|  |   ip = tmp[0]; | ||||||
|  |   nrm = real(tmp[1]); | ||||||
|  | } | ||||||
|  |  | ||||||
| template<class Op,class T1> | template<class Op,class T1> | ||||||
| inline auto sum(const LatticeUnaryExpression<Op,T1> & expr) | inline auto sum(const LatticeUnaryExpression<Op,T1> & expr) | ||||||
|   ->typename decltype(expr.first.func(eval(0,std::get<0>(expr.second))))::scalar_object |   ->typename decltype(expr.op.func(eval(0,expr.arg1)))::scalar_object | ||||||
| { | { | ||||||
|   return sum(closure(expr)); |   return sum(closure(expr)); | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class Op,class T1,class T2> | template<class Op,class T1,class T2> | ||||||
| inline auto sum(const LatticeBinaryExpression<Op,T1,T2> & expr) | inline auto sum(const LatticeBinaryExpression<Op,T1,T2> & expr) | ||||||
|       ->typename decltype(expr.first.func(eval(0,std::get<0>(expr.second)),eval(0,std::get<1>(expr.second))))::scalar_object |       ->typename decltype(expr.op.func(eval(0,expr.arg1),eval(0,expr.arg2)))::scalar_object | ||||||
| { | { | ||||||
|   return sum(closure(expr)); |   return sum(closure(expr)); | ||||||
| } | } | ||||||
| @@ -139,54 +289,14 @@ inline auto sum(const LatticeBinaryExpression<Op,T1,T2> & expr) | |||||||
|  |  | ||||||
| template<class Op,class T1,class T2,class T3> | template<class Op,class T1,class T2,class T3> | ||||||
| inline auto sum(const LatticeTrinaryExpression<Op,T1,T2,T3> & expr) | inline auto sum(const LatticeTrinaryExpression<Op,T1,T2,T3> & expr) | ||||||
|   ->typename decltype(expr.first.func(eval(0,std::get<0>(expr.second)), |   ->typename decltype(expr.op.func(eval(0,expr.arg1), | ||||||
| 				      eval(0,std::get<1>(expr.second)), | 				      eval(0,expr.arg2), | ||||||
| 				      eval(0,std::get<2>(expr.second)) | 				      eval(0,expr.arg3) | ||||||
| 				      ))::scalar_object | 				      ))::scalar_object | ||||||
| { | { | ||||||
|   return sum(closure(expr)); |   return sum(closure(expr)); | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj> |  | ||||||
| inline typename vobj::scalar_object sum(const Lattice<vobj> &arg) |  | ||||||
| { |  | ||||||
|   GridBase *grid=arg._grid; |  | ||||||
|   int Nsimd = grid->Nsimd(); |  | ||||||
|    |  | ||||||
|   std::vector<vobj,alignedAllocator<vobj> > sumarray(grid->SumArraySize()); |  | ||||||
|   for(int i=0;i<grid->SumArraySize();i++){ |  | ||||||
|     sumarray[i]=zero; |  | ||||||
|   } |  | ||||||
|    |  | ||||||
|   parallel_for(int thr=0;thr<grid->SumArraySize();thr++){ |  | ||||||
|     int nwork, mywork, myoff; |  | ||||||
|     GridThread::GetWork(grid->oSites(),thr,mywork,myoff); |  | ||||||
|      |  | ||||||
|     vobj vvsum=zero; |  | ||||||
|     for(int ss=myoff;ss<mywork+myoff; ss++){ |  | ||||||
|       vvsum = vvsum + arg._odata[ss]; |  | ||||||
|     } |  | ||||||
|     sumarray[thr]=vvsum; |  | ||||||
|   } |  | ||||||
|    |  | ||||||
|   vobj vsum=zero;  // sum across threads |  | ||||||
|   for(int i=0;i<grid->SumArraySize();i++){ |  | ||||||
|     vsum = vsum+sumarray[i]; |  | ||||||
|   }  |  | ||||||
|    |  | ||||||
|   typedef typename vobj::scalar_object sobj; |  | ||||||
|   sobj ssum=zero; |  | ||||||
|    |  | ||||||
|   std::vector<sobj>               buf(Nsimd); |  | ||||||
|   extract(vsum,buf); |  | ||||||
|    |  | ||||||
|   for(int i=0;i<Nsimd;i++) ssum = ssum + buf[i]; |  | ||||||
|   arg._grid->GlobalSum(ssum); |  | ||||||
|    |  | ||||||
|   return ssum; |  | ||||||
| } |  | ||||||
|  |  | ||||||
|  |  | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| // sliceSum, sliceInnerProduct, sliceAxpy, sliceNorm etc... | // sliceSum, sliceInnerProduct, sliceAxpy, sliceNorm etc... | ||||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ////////////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
| @@ -199,7 +309,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|   // But easily avoided by using double precision fields |   // But easily avoided by using double precision fields | ||||||
|   /////////////////////////////////////////////////////// |   /////////////////////////////////////////////////////// | ||||||
|   typedef typename vobj::scalar_object sobj; |   typedef typename vobj::scalar_object sobj; | ||||||
|   GridBase  *grid = Data._grid; |   GridBase  *grid = Data.Grid(); | ||||||
|   assert(grid!=NULL); |   assert(grid!=NULL); | ||||||
|  |  | ||||||
|   const int    Nd = grid->_ndimension; |   const int    Nd = grid->_ndimension; | ||||||
| @@ -212,13 +322,13 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|   int ld=grid->_ldimensions[orthogdim]; |   int ld=grid->_ldimensions[orthogdim]; | ||||||
|   int rd=grid->_rdimensions[orthogdim]; |   int rd=grid->_rdimensions[orthogdim]; | ||||||
|  |  | ||||||
|   std::vector<vobj,alignedAllocator<vobj> > lvSum(rd); // will locally sum vectors first |   Vector<vobj> lvSum(rd); // will locally sum vectors first | ||||||
|   std::vector<sobj> lsSum(ld,zero);                    // sum across these down to scalars |   Vector<sobj> lsSum(ld,Zero());                    // sum across these down to scalars | ||||||
|   std::vector<sobj> extracted(Nsimd);                  // splitting the SIMD |   ExtractBuffer<sobj> extracted(Nsimd);                  // splitting the SIMD | ||||||
|  |  | ||||||
|   result.resize(fd); // And then global sum to return the same vector to every node  |   result.resize(fd); // And then global sum to return the same vector to every node  | ||||||
|   for(int r=0;r<rd;r++){ |   for(int r=0;r<rd;r++){ | ||||||
|     lvSum[r]=zero; |     lvSum[r]=Zero(); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int e1=    grid->_slice_nblock[orthogdim]; |   int e1=    grid->_slice_nblock[orthogdim]; | ||||||
| @@ -227,20 +337,19 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|  |  | ||||||
|   // sum over reduced dimension planes, breaking out orthog dir |   // sum over reduced dimension planes, breaking out orthog dir | ||||||
|   // Parallel over orthog direction |   // Parallel over orthog direction | ||||||
|   parallel_for(int r=0;r<rd;r++){ |   autoView( Data_v, Data, CpuRead); | ||||||
|  |   thread_for( r,rd, { | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||||
|  |  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int ss= so+n*stride+b; | 	int ss= so+n*stride+b; | ||||||
| 	lvSum[r]=lvSum[r]+Data._odata[ss]; | 	lvSum[r]=lvSum[r]+Data_v[ss]; | ||||||
|       } |  | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|  |   }); | ||||||
|  |  | ||||||
|   // Sum across simd lanes in the plane, breaking out orthog dir. |   // Sum across simd lanes in the plane, breaking out orthog dir. | ||||||
|   std::vector<int> icoor(Nd); |   Coordinate icoor(Nd); | ||||||
|  |  | ||||||
|   for(int rt=0;rt<rd;rt++){ |   for(int rt=0;rt<rd;rt++){ | ||||||
|  |  | ||||||
| @@ -265,7 +374,7 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|     if ( pt == grid->_processor_coor[orthogdim] ) { |     if ( pt == grid->_processor_coor[orthogdim] ) { | ||||||
|       gsum=lsSum[lt]; |       gsum=lsSum[lt]; | ||||||
|     } else { |     } else { | ||||||
|       gsum=zero; |       gsum=Zero(); | ||||||
|     } |     } | ||||||
|  |  | ||||||
|     grid->GlobalSum(gsum); |     grid->GlobalSum(gsum); | ||||||
| @@ -274,123 +383,14 @@ template<class vobj> inline void sliceSum(const Lattice<vobj> &Data,std::vector< | |||||||
|   } |   } | ||||||
| } | } | ||||||
|  |  | ||||||
| template<class vobj> |  | ||||||
| static void mySliceInnerProductVector( std::vector<ComplexD> & result, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int orthogdim) |  | ||||||
| { |  | ||||||
|   // std::cout << GridLogMessage << "Start mySliceInnerProductVector" << std::endl; |  | ||||||
|  |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |  | ||||||
|   std::vector<scalar_type> lsSum; |  | ||||||
|   localSliceInnerProductVector(result, lhs, rhs, lsSum, orthogdim); |  | ||||||
|   globalSliceInnerProductVector(result, lhs, lsSum, orthogdim); |  | ||||||
|   // std::cout << GridLogMessage << "End mySliceInnerProductVector" << std::endl; |  | ||||||
| } |  | ||||||
|  |  | ||||||
| template <class vobj> |  | ||||||
| static void localSliceInnerProductVector(std::vector<ComplexD> &result, const Lattice<vobj> &lhs, const Lattice<vobj> &rhs, std::vector<typename vobj::scalar_type> &lsSum, int orthogdim) |  | ||||||
| { |  | ||||||
|   // std::cout << GridLogMessage << "Start prep" << std::endl; |  | ||||||
|   typedef typename vobj::vector_type   vector_type; |  | ||||||
|   typedef typename vobj::scalar_type   scalar_type; |  | ||||||
|   GridBase  *grid = lhs._grid; |  | ||||||
|   assert(grid!=NULL); |  | ||||||
|   conformable(grid,rhs._grid); |  | ||||||
|  |  | ||||||
|   const int    Nd = grid->_ndimension; |  | ||||||
|   const int Nsimd = grid->Nsimd(); |  | ||||||
|  |  | ||||||
|   assert(orthogdim >= 0); |  | ||||||
|   assert(orthogdim < Nd); |  | ||||||
|  |  | ||||||
|   int fd=grid->_fdimensions[orthogdim]; |  | ||||||
|   int ld=grid->_ldimensions[orthogdim]; |  | ||||||
|   int rd=grid->_rdimensions[orthogdim]; |  | ||||||
|   // std::cout << GridLogMessage << "Start alloc" << std::endl; |  | ||||||
|  |  | ||||||
|   std::vector<vector_type,alignedAllocator<vector_type> > lvSum(rd); // will locally sum vectors first |  | ||||||
|   lsSum.resize(ld,scalar_type(0.0));                    // sum across these down to scalars |  | ||||||
|   std::vector<iScalar<scalar_type>> extracted(Nsimd);   // splitting the SIMD   |  | ||||||
|   // std::cout << GridLogMessage << "End alloc" << std::endl; |  | ||||||
|  |  | ||||||
|   result.resize(fd); // And then global sum to return the same vector to every node for IO to file |  | ||||||
|   for(int r=0;r<rd;r++){ |  | ||||||
|     lvSum[r]=zero; |  | ||||||
|   } |  | ||||||
|  |  | ||||||
|   int e1=    grid->_slice_nblock[orthogdim]; |  | ||||||
|   int e2=    grid->_slice_block [orthogdim]; |  | ||||||
|   int stride=grid->_slice_stride[orthogdim]; |  | ||||||
|   // std::cout << GridLogMessage << "End prep" << std::endl; |  | ||||||
|   // std::cout << GridLogMessage << "Start parallel inner product, _rd = " << rd << std::endl; |  | ||||||
|   vector_type vv; |  | ||||||
|   parallel_for(int r=0;r<rd;r++) |  | ||||||
|   { |  | ||||||
|  |  | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |  | ||||||
|  |  | ||||||
|     for(int n=0;n<e1;n++){ |  | ||||||
|       for(int b=0;b<e2;b++){ |  | ||||||
|         int ss = so + n * stride + b; |  | ||||||
|         vv = TensorRemove(innerProduct(lhs._odata[ss], rhs._odata[ss])); |  | ||||||
|         lvSum[r] = lvSum[r] + vv; |  | ||||||
|       } |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|   // std::cout << GridLogMessage << "End parallel inner product" << std::endl; |  | ||||||
|  |  | ||||||
|   // Sum across simd lanes in the plane, breaking out orthog dir. |  | ||||||
|   std::vector<int> icoor(Nd); |  | ||||||
|   for(int rt=0;rt<rd;rt++){ |  | ||||||
|  |  | ||||||
|     iScalar<vector_type> temp;  |  | ||||||
|     temp._internal = lvSum[rt]; |  | ||||||
|     extract(temp,extracted); |  | ||||||
|  |  | ||||||
|     for(int idx=0;idx<Nsimd;idx++){ |  | ||||||
|  |  | ||||||
|       grid->iCoorFromIindex(icoor,idx); |  | ||||||
|  |  | ||||||
|       int ldx =rt+icoor[orthogdim]*rd; |  | ||||||
|  |  | ||||||
|       lsSum[ldx]=lsSum[ldx]+extracted[idx]._internal; |  | ||||||
|  |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|   // std::cout << GridLogMessage << "End sum over simd lanes" << std::endl; |  | ||||||
| } |  | ||||||
| template <class vobj> |  | ||||||
| static void globalSliceInnerProductVector(std::vector<ComplexD> &result, const Lattice<vobj> &lhs, std::vector<typename vobj::scalar_type> &lsSum, int orthogdim) |  | ||||||
| { |  | ||||||
|   typedef typename vobj::scalar_type scalar_type; |  | ||||||
|   GridBase *grid = lhs._grid; |  | ||||||
|   int fd = result.size(); |  | ||||||
|   int ld = lsSum.size(); |  | ||||||
|   // sum over nodes. |  | ||||||
|   std::vector<scalar_type> gsum; |  | ||||||
|   gsum.resize(fd, scalar_type(0.0)); |  | ||||||
|   // std::cout << GridLogMessage << "Start of gsum[t] creation:" << std::endl; |  | ||||||
|   for(int t=0;t<fd;t++){ |  | ||||||
|     int pt = t/ld; // processor plane |  | ||||||
|     int lt = t%ld; |  | ||||||
|     if ( pt == grid->_processor_coor[orthogdim] ) { |  | ||||||
|       gsum[t]=lsSum[lt]; |  | ||||||
|     } |  | ||||||
|   } |  | ||||||
|   // std::cout << GridLogMessage << "End of gsum[t] creation:" << std::endl; |  | ||||||
|   // std::cout << GridLogMessage << "Start of GlobalSumVector:" << std::endl; |  | ||||||
|   grid->GlobalSumVector(&gsum[0], fd); |  | ||||||
|   // std::cout << GridLogMessage << "End of GlobalSumVector:" << std::endl; |  | ||||||
|  |  | ||||||
|   result = gsum; |  | ||||||
| } |  | ||||||
| template<class vobj> | template<class vobj> | ||||||
| static void sliceInnerProductVector( std::vector<ComplexD> & result, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int orthogdim)  | static void sliceInnerProductVector( std::vector<ComplexD> & result, const Lattice<vobj> &lhs,const Lattice<vobj> &rhs,int orthogdim)  | ||||||
| { | { | ||||||
|   typedef typename vobj::vector_type   vector_type; |   typedef typename vobj::vector_type   vector_type; | ||||||
|   typedef typename vobj::scalar_type   scalar_type; |   typedef typename vobj::scalar_type   scalar_type; | ||||||
|   GridBase  *grid = lhs._grid; |   GridBase  *grid = lhs.Grid(); | ||||||
|   assert(grid!=NULL); |   assert(grid!=NULL); | ||||||
|   conformable(grid,rhs._grid); |   conformable(grid,rhs.Grid()); | ||||||
|  |  | ||||||
|   const int    Nd = grid->_ndimension; |   const int    Nd = grid->_ndimension; | ||||||
|   const int Nsimd = grid->Nsimd(); |   const int Nsimd = grid->Nsimd(); | ||||||
| @@ -402,34 +402,36 @@ static void sliceInnerProductVector( std::vector<ComplexD> & result, const Latti | |||||||
|   int ld=grid->_ldimensions[orthogdim]; |   int ld=grid->_ldimensions[orthogdim]; | ||||||
|   int rd=grid->_rdimensions[orthogdim]; |   int rd=grid->_rdimensions[orthogdim]; | ||||||
|  |  | ||||||
|   std::vector<vector_type,alignedAllocator<vector_type> > lvSum(rd); // will locally sum vectors first |   Vector<vector_type> lvSum(rd); // will locally sum vectors first | ||||||
|   std::vector<scalar_type > lsSum(ld,scalar_type(0.0));                    // sum across these down to scalars |   Vector<scalar_type > lsSum(ld,scalar_type(0.0));                    // sum across these down to scalars | ||||||
|   std::vector<iScalar<scalar_type> > extracted(Nsimd);                  // splitting the SIMD |   ExtractBuffer<iScalar<scalar_type> > extracted(Nsimd);   // splitting the SIMD   | ||||||
|  |  | ||||||
|   result.resize(fd); // And then global sum to return the same vector to every node for IO to file |   result.resize(fd); // And then global sum to return the same vector to every node for IO to file | ||||||
|   for(int r=0;r<rd;r++){ |   for(int r=0;r<rd;r++){ | ||||||
|     lvSum[r]=zero; |     lvSum[r]=Zero(); | ||||||
|   } |   } | ||||||
|  |  | ||||||
|   int e1=    grid->_slice_nblock[orthogdim]; |   int e1=    grid->_slice_nblock[orthogdim]; | ||||||
|   int e2=    grid->_slice_block [orthogdim]; |   int e2=    grid->_slice_block [orthogdim]; | ||||||
|   int stride=grid->_slice_stride[orthogdim]; |   int stride=grid->_slice_stride[orthogdim]; | ||||||
|  |  | ||||||
|   parallel_for(int r=0;r<rd;r++){ |   autoView( lhv, lhs, CpuRead); | ||||||
|  |   autoView( rhv, rhs, CpuRead); | ||||||
|  |   thread_for( r,rd,{ | ||||||
|  |  | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||||
|  |  | ||||||
|     for(int n=0;n<e1;n++){ |     for(int n=0;n<e1;n++){ | ||||||
|       for(int b=0;b<e2;b++){ |       for(int b=0;b<e2;b++){ | ||||||
| 	int ss= so+n*stride+b; | 	int ss= so+n*stride+b; | ||||||
| 	vector_type vv = TensorRemove(innerProduct(lhs._odata[ss],rhs._odata[ss])); | 	vector_type vv = TensorRemove(innerProduct(lhv[ss],rhv[ss])); | ||||||
| 	lvSum[r]=lvSum[r]+vv; | 	lvSum[r]=lvSum[r]+vv; | ||||||
|       } |       } | ||||||
|     } |     } | ||||||
|   } |   }); | ||||||
|  |  | ||||||
|   // Sum across simd lanes in the plane, breaking out orthog dir. |   // Sum across simd lanes in the plane, breaking out orthog dir. | ||||||
|   std::vector<int> icoor(Nd); |   Coordinate icoor(Nd); | ||||||
|   for(int rt=0;rt<rd;rt++){ |   for(int rt=0;rt<rd;rt++){ | ||||||
|  |  | ||||||
|     iScalar<vector_type> temp;  |     iScalar<vector_type> temp;  | ||||||
| @@ -470,7 +472,7 @@ static void sliceNorm (std::vector<RealD> &sn,const Lattice<vobj> &rhs,int Ortho | |||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|    |    | ||||||
|   int Nblock = rhs._grid->GlobalDimensions()[Orthog]; |   int Nblock = rhs.Grid()->GlobalDimensions()[Orthog]; | ||||||
|   std::vector<ComplexD> ip(Nblock); |   std::vector<ComplexD> ip(Nblock); | ||||||
|   sn.resize(Nblock); |   sn.resize(Nblock); | ||||||
|    |    | ||||||
| @@ -492,7 +494,7 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice | |||||||
|    |    | ||||||
|   scalar_type zscale(scale); |   scalar_type zscale(scale); | ||||||
|  |  | ||||||
|   GridBase *grid  = X._grid; |   GridBase *grid  = X.Grid(); | ||||||
|  |  | ||||||
|   int Nsimd  =grid->Nsimd(); |   int Nsimd  =grid->Nsimd(); | ||||||
|   int Nblock =grid->GlobalDimensions()[orthogdim]; |   int Nblock =grid->GlobalDimensions()[orthogdim]; | ||||||
| @@ -505,8 +507,7 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice | |||||||
|   int e2     =grid->_slice_block [orthogdim]; |   int e2     =grid->_slice_block [orthogdim]; | ||||||
|   int stride =grid->_slice_stride[orthogdim]; |   int stride =grid->_slice_stride[orthogdim]; | ||||||
|  |  | ||||||
|   std::vector<int> icoor; |   Coordinate icoor; | ||||||
|  |  | ||||||
|   for(int r=0;r<rd;r++){ |   for(int r=0;r<rd;r++){ | ||||||
|  |  | ||||||
|     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  |     int so=r*grid->_ostride[orthogdim]; // base offset for start of plane  | ||||||
| @@ -522,12 +523,13 @@ static void sliceMaddVector(Lattice<vobj> &R,std::vector<RealD> &a,const Lattice | |||||||
|  |  | ||||||
|     tensor_reduced at; at=av; |     tensor_reduced at; at=av; | ||||||
|  |  | ||||||
|     parallel_for_nest2(int n=0;n<e1;n++){ |     autoView( Rv, R, CpuWrite); | ||||||
|       for(int b=0;b<e2;b++){ |     autoView( Xv, X, CpuRead); | ||||||
|  |     autoView( Yv, Y, CpuRead); | ||||||
|  |     thread_for2d( n, e1, b,e2, { | ||||||
| 	int ss= so+n*stride+b; | 	int ss= so+n*stride+b; | ||||||
| 	R._odata[ss] = at*X._odata[ss]+Y._odata[ss]; | 	Rv[ss] = at*Xv[ss]+Yv[ss]; | ||||||
|       } |     }); | ||||||
|     } |  | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -559,18 +561,18 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | |||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nblock = X._grid->GlobalDimensions()[Orthog]; |   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||||
|  |  | ||||||
|   GridBase *FullGrid  = X._grid; |   GridBase *FullGrid  = X.Grid(); | ||||||
|   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); |   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); | ||||||
|  |  | ||||||
|   //  Lattice<vobj> Xslice(SliceGrid); |   //  Lattice<vobj> Xslice(SliceGrid); | ||||||
|   //  Lattice<vobj> Rslice(SliceGrid); |   //  Lattice<vobj> Rslice(SliceGrid); | ||||||
|  |  | ||||||
|   assert( FullGrid->_simd_layout[Orthog]==1); |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|   int nh =  FullGrid->_ndimension; |   //  int nh =  FullGrid->_ndimension; | ||||||
|   //  int nl = SliceGrid->_ndimension; |   //  int nl = SliceGrid->_ndimension; | ||||||
|   int nl = nh-1; |   //  int nl = nh-1; | ||||||
|  |  | ||||||
|   //FIXME package in a convenient iterator |   //FIXME package in a convenient iterator | ||||||
|   //Should loop over a plane orthogonal to direction "Orthog" |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
| @@ -578,28 +580,31 @@ static void sliceMaddMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice | |||||||
|   int block =FullGrid->_slice_block [Orthog]; |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
| #pragma omp parallel  |  | ||||||
|   { |  | ||||||
|     std::vector<vobj> s_x(Nblock); |  | ||||||
|  |  | ||||||
| #pragma omp for collapse(2) |   autoView( X_v, X, CpuRead); | ||||||
|     for(int n=0;n<nblock;n++){ |   autoView( Y_v, Y, CpuRead); | ||||||
|  |   autoView( R_v, R, CpuWrite); | ||||||
|  |   thread_region | ||||||
|  |   { | ||||||
|  |     Vector<vobj> s_x(Nblock); | ||||||
|  |  | ||||||
|  |     thread_for_collapse_in_region(2, n,nblock, { | ||||||
|      for(int b=0;b<block;b++){ |      for(int b=0;b<block;b++){ | ||||||
|       int o  = n*stride + b; |       int o  = n*stride + b; | ||||||
|  |  | ||||||
|       for(int i=0;i<Nblock;i++){ |       for(int i=0;i<Nblock;i++){ | ||||||
| 	s_x[i] = X[o+i*ostride]; | 	s_x[i] = X_v[o+i*ostride]; | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       vobj dot; |       vobj dot; | ||||||
|       for(int i=0;i<Nblock;i++){ |       for(int i=0;i<Nblock;i++){ | ||||||
| 	dot = Y[o+i*ostride]; | 	dot = Y_v[o+i*ostride]; | ||||||
| 	for(int j=0;j<Nblock;j++){ | 	for(int j=0;j<Nblock;j++){ | ||||||
| 	  dot = dot + s_x[j]*(scale*aa(j,i)); | 	  dot = dot + s_x[j]*(scale*aa(j,i)); | ||||||
| 	} | 	} | ||||||
| 	R[o+i*ostride]=dot; | 	R_v[o+i*ostride]=dot; | ||||||
|       } |       } | ||||||
|     }} |     }}); | ||||||
|   } |   } | ||||||
| }; | }; | ||||||
|  |  | ||||||
| @@ -610,35 +615,38 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | |||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|  |  | ||||||
|   int Nblock = X._grid->GlobalDimensions()[Orthog]; |   int Nblock = X.Grid()->GlobalDimensions()[Orthog]; | ||||||
|  |  | ||||||
|   GridBase *FullGrid  = X._grid; |   GridBase *FullGrid  = X.Grid(); | ||||||
|   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); |   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); | ||||||
|   //  Lattice<vobj> Xslice(SliceGrid); |   //  Lattice<vobj> Xslice(SliceGrid); | ||||||
|   //  Lattice<vobj> Rslice(SliceGrid); |   //  Lattice<vobj> Rslice(SliceGrid); | ||||||
|  |  | ||||||
|   assert( FullGrid->_simd_layout[Orthog]==1); |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|   int nh =  FullGrid->_ndimension; |   //  int nh =  FullGrid->_ndimension; | ||||||
|   //  int nl = SliceGrid->_ndimension; |   //  int nl = SliceGrid->_ndimension; | ||||||
|   int nl=1; |   //  int nl=1; | ||||||
|  |  | ||||||
|   //FIXME package in a convenient iterator |   //FIXME package in a convenient iterator | ||||||
|  |   // thread_for2d_in_region | ||||||
|   //Should loop over a plane orthogonal to direction "Orthog" |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
|   int stride=FullGrid->_slice_stride[Orthog]; |   int stride=FullGrid->_slice_stride[Orthog]; | ||||||
|   int block =FullGrid->_slice_block [Orthog]; |   int block =FullGrid->_slice_block [Orthog]; | ||||||
|   int nblock=FullGrid->_slice_nblock[Orthog]; |   int nblock=FullGrid->_slice_nblock[Orthog]; | ||||||
|   int ostride=FullGrid->_ostride[Orthog]; |   int ostride=FullGrid->_ostride[Orthog]; | ||||||
| #pragma omp parallel  |   autoView( R_v, R, CpuWrite); | ||||||
|  |   autoView( X_v, X, CpuRead); | ||||||
|  |   thread_region | ||||||
|   { |   { | ||||||
|     std::vector<vobj> s_x(Nblock); |     std::vector<vobj> s_x(Nblock); | ||||||
|  |  | ||||||
| #pragma omp for collapse(2) |  | ||||||
|     for(int n=0;n<nblock;n++){ |     thread_for_collapse_in_region( 2 ,n,nblock,{ | ||||||
|     for(int b=0;b<block;b++){ |     for(int b=0;b<block;b++){ | ||||||
|       int o  = n*stride + b; |       int o  = n*stride + b; | ||||||
|  |  | ||||||
|       for(int i=0;i<Nblock;i++){ |       for(int i=0;i<Nblock;i++){ | ||||||
| 	s_x[i] = X[o+i*ostride]; | 	s_x[i] = X_v[o+i*ostride]; | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       vobj dot; |       vobj dot; | ||||||
| @@ -647,11 +655,10 @@ static void sliceMulMatrix (Lattice<vobj> &R,Eigen::MatrixXcd &aa,const Lattice< | |||||||
| 	for(int j=1;j<Nblock;j++){ | 	for(int j=1;j<Nblock;j++){ | ||||||
| 	  dot = dot + s_x[j]*(scale*aa(j,i)); | 	  dot = dot + s_x[j]*(scale*aa(j,i)); | ||||||
| 	} | 	} | ||||||
| 	R[o+i*ostride]=dot; | 	R_v[o+i*ostride]=dot; | ||||||
|       } |       } | ||||||
|     }} |     }}); | ||||||
|   } |   } | ||||||
|  |  | ||||||
| }; | }; | ||||||
|  |  | ||||||
|  |  | ||||||
| @@ -662,7 +669,7 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|   typedef typename vobj::scalar_type scalar_type; |   typedef typename vobj::scalar_type scalar_type; | ||||||
|   typedef typename vobj::vector_type vector_type; |   typedef typename vobj::vector_type vector_type; | ||||||
|    |    | ||||||
|   GridBase *FullGrid  = lhs._grid; |   GridBase *FullGrid  = lhs.Grid(); | ||||||
|   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); |   //  GridBase *SliceGrid = makeSubSliceGrid(FullGrid,Orthog); | ||||||
|    |    | ||||||
|   int Nblock = FullGrid->GlobalDimensions()[Orthog]; |   int Nblock = FullGrid->GlobalDimensions()[Orthog]; | ||||||
| @@ -673,9 +680,9 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|   mat = Eigen::MatrixXcd::Zero(Nblock,Nblock); |   mat = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||||
|  |  | ||||||
|   assert( FullGrid->_simd_layout[Orthog]==1); |   assert( FullGrid->_simd_layout[Orthog]==1); | ||||||
|   int nh =  FullGrid->_ndimension; |   //  int nh =  FullGrid->_ndimension; | ||||||
|   //  int nl = SliceGrid->_ndimension; |   //  int nl = SliceGrid->_ndimension; | ||||||
|   int nl = nh-1; |   //  int nl = nh-1; | ||||||
|  |  | ||||||
|   //FIXME package in a convenient iterator |   //FIXME package in a convenient iterator | ||||||
|   //Should loop over a plane orthogonal to direction "Orthog" |   //Should loop over a plane orthogonal to direction "Orthog" | ||||||
| @@ -686,31 +693,33 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|  |  | ||||||
|   typedef typename vobj::vector_typeD vector_typeD; |   typedef typename vobj::vector_typeD vector_typeD; | ||||||
|  |  | ||||||
| #pragma omp parallel  |   autoView( lhs_v, lhs, CpuRead); | ||||||
|  |   autoView( rhs_v, rhs, CpuRead); | ||||||
|  |   thread_region | ||||||
|   { |   { | ||||||
|     std::vector<vobj> Left(Nblock); |     std::vector<vobj> Left(Nblock); | ||||||
|     std::vector<vobj> Right(Nblock); |     std::vector<vobj> Right(Nblock); | ||||||
|     Eigen::MatrixXcd  mat_thread = Eigen::MatrixXcd::Zero(Nblock,Nblock); |     Eigen::MatrixXcd  mat_thread = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||||
|  |  | ||||||
| #pragma omp for collapse(2) |     thread_for_collapse_in_region( 2, n,nblock,{ | ||||||
|     for(int n=0;n<nblock;n++){ |  | ||||||
|     for(int b=0;b<block;b++){ |     for(int b=0;b<block;b++){ | ||||||
|  |  | ||||||
|       int o  = n*stride + b; |       int o  = n*stride + b; | ||||||
|  |  | ||||||
|       for(int i=0;i<Nblock;i++){ |       for(int i=0;i<Nblock;i++){ | ||||||
| 	Left [i] = lhs[o+i*ostride]; | 	Left [i] = lhs_v[o+i*ostride]; | ||||||
| 	Right[i] = rhs[o+i*ostride]; | 	Right[i] = rhs_v[o+i*ostride]; | ||||||
|       } |       } | ||||||
|  |  | ||||||
|       for(int i=0;i<Nblock;i++){ |       for(int i=0;i<Nblock;i++){ | ||||||
|       for(int j=0;j<Nblock;j++){ |       for(int j=0;j<Nblock;j++){ | ||||||
| 	auto tmp = innerProduct(Left[i],Right[j]); | 	auto tmp = innerProduct(Left[i],Right[j]); | ||||||
| 	auto rtmp = TensorRemove(tmp); | 	auto rtmp = TensorRemove(tmp); | ||||||
| 	mat_thread(i,j) += Reduce(rtmp); | 	auto red  =  Reduce(rtmp); | ||||||
|  | 	mat_thread(i,j) += std::complex<double>(real(red),imag(red)); | ||||||
|       }} |       }} | ||||||
|     }} |     }}); | ||||||
| #pragma omp critical |     thread_critical | ||||||
|     { |     { | ||||||
|       mat += mat_thread; |       mat += mat_thread; | ||||||
|     }   |     }   | ||||||
| @@ -726,8 +735,8 @@ static void sliceInnerProductMatrix(  Eigen::MatrixXcd &mat, const Lattice<vobj> | |||||||
|   return; |   return; | ||||||
| } | } | ||||||
|  |  | ||||||
| } /*END NAMESPACE GRID*/ | NAMESPACE_END(Grid); | ||||||
| #endif |  | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
|   | |||||||
							
								
								
									
										232
									
								
								Grid/lattice/Lattice_reduction_gpu.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										232
									
								
								Grid/lattice/Lattice_reduction_gpu.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,232 @@ | |||||||
|  | NAMESPACE_BEGIN(Grid); | ||||||
|  |  | ||||||
|  | #ifdef GRID_HIP | ||||||
|  | extern hipDeviceProp_t *gpu_props; | ||||||
|  | #define WARP_SIZE 64 | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  | extern cudaDeviceProp *gpu_props; | ||||||
|  | #define WARP_SIZE 32 | ||||||
|  | #endif | ||||||
|  |  | ||||||
|  | __device__ unsigned int retirementCount = 0; | ||||||
|  |  | ||||||
|  | template <class Iterator> | ||||||
|  | unsigned int nextPow2(Iterator x) { | ||||||
|  |   --x; | ||||||
|  |   x |= x >> 1; | ||||||
|  |   x |= x >> 2; | ||||||
|  |   x |= x >> 4; | ||||||
|  |   x |= x >> 8; | ||||||
|  |   x |= x >> 16; | ||||||
|  |   return ++x; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template <class Iterator> | ||||||
|  | void getNumBlocksAndThreads(const Iterator n, const size_t sizeofsobj, Iterator &threads, Iterator &blocks) { | ||||||
|  |    | ||||||
|  |   int device; | ||||||
|  | #ifdef GRID_CUDA | ||||||
|  |   cudaGetDevice(&device); | ||||||
|  | #endif | ||||||
|  | #ifdef GRID_HIP | ||||||
|  |   hipGetDevice(&device); | ||||||
|  | #endif | ||||||
|  |    | ||||||
|  |   Iterator warpSize            = gpu_props[device].warpSize; | ||||||
|  |   Iterator sharedMemPerBlock   = gpu_props[device].sharedMemPerBlock; | ||||||
|  |   Iterator maxThreadsPerBlock  = gpu_props[device].maxThreadsPerBlock; | ||||||
|  |   Iterator multiProcessorCount = gpu_props[device].multiProcessorCount; | ||||||
|  |    | ||||||
|  |   std::cout << GridLogDebug << "GPU has:" << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "\twarpSize            = " << warpSize << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "\tsharedMemPerBlock   = " << sharedMemPerBlock << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "\tmaxThreadsPerBlock  = " << maxThreadsPerBlock << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "\tmaxThreadsPerBlock  = " << warpSize << std::endl; | ||||||
|  |   std::cout << GridLogDebug << "\tmultiProcessorCount = " << multiProcessorCount << std::endl; | ||||||
|  |    | ||||||
|  |   if (warpSize != WARP_SIZE) { | ||||||
|  |     std::cout << GridLogError << "The warp size of the GPU in use does not match the warp size set when compiling Grid." << std::endl; | ||||||
|  |     exit(EXIT_FAILURE); | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   // let the number of threads in a block be a multiple of 2, starting from warpSize | ||||||
|  |   threads = warpSize; | ||||||
|  |   while( 2*threads*sizeofsobj < sharedMemPerBlock && 2*threads <= maxThreadsPerBlock ) threads *= 2; | ||||||
|  |   // keep all the streaming multiprocessors busy | ||||||
|  |   blocks = nextPow2(multiProcessorCount); | ||||||
|  |    | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template <class sobj, class Iterator> | ||||||
|  | __device__ void reduceBlock(volatile sobj *sdata, sobj mySum, const Iterator tid) { | ||||||
|  |    | ||||||
|  |   Iterator blockSize = blockDim.x; | ||||||
|  |    | ||||||
|  |   // cannot use overloaded operators for sobj as they are not volatile-qualified | ||||||
|  |   memcpy((void *)&sdata[tid], (void *)&mySum, sizeof(sobj)); | ||||||
|  |   acceleratorSynchronise(); | ||||||
|  |    | ||||||
|  |   const Iterator VEC = WARP_SIZE; | ||||||
|  |   const Iterator vid = tid & (VEC-1); | ||||||
|  |    | ||||||
|  |   sobj beta, temp; | ||||||
|  |   memcpy((void *)&beta, (void *)&mySum, sizeof(sobj)); | ||||||
|  |    | ||||||
|  |   for (int i = VEC/2; i > 0; i>>=1) { | ||||||
|  |     if (vid < i) { | ||||||
|  |       memcpy((void *)&temp, (void *)&sdata[tid+i], sizeof(sobj)); | ||||||
|  |       beta += temp; | ||||||
|  |       memcpy((void *)&sdata[tid], (void *)&beta, sizeof(sobj)); | ||||||
|  |     } | ||||||
|  |     acceleratorSynchronise(); | ||||||
|  |   } | ||||||
|  |   acceleratorSynchroniseAll(); | ||||||
|  |    | ||||||
|  |   if (threadIdx.x == 0) { | ||||||
|  |     beta  = Zero(); | ||||||
|  |     for (Iterator i = 0; i < blockSize; i += VEC) { | ||||||
|  |       memcpy((void *)&temp, (void *)&sdata[i], sizeof(sobj)); | ||||||
|  |       beta  += temp; | ||||||
|  |     } | ||||||
|  |     memcpy((void *)&sdata[0], (void *)&beta, sizeof(sobj)); | ||||||
|  |   } | ||||||
|  |   acceleratorSynchroniseAll(); | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  | template <class vobj, class sobj, class Iterator> | ||||||
|  | __device__ void reduceBlocks(const vobj *g_idata, sobj *g_odata, Iterator n)  | ||||||
|  | { | ||||||
|  |   constexpr Iterator nsimd = vobj::Nsimd(); | ||||||
|  |    | ||||||
|  |   Iterator blockSize = blockDim.x; | ||||||
|  |    | ||||||
|  |   // force shared memory alignment | ||||||
|  |   extern __shared__ __align__(COALESCE_GRANULARITY) unsigned char shmem_pointer[]; | ||||||
|  |   // it's not possible to have two extern __shared__ arrays with same name | ||||||
|  |   // but different types in different scopes -- need to cast each time | ||||||
|  |   sobj *sdata = (sobj *)shmem_pointer; | ||||||
|  |    | ||||||
|  |   // first level of reduction, | ||||||
|  |   // each thread writes result in mySum | ||||||
|  |   Iterator tid = threadIdx.x; | ||||||
|  |   Iterator i = blockIdx.x*(blockSize*2) + threadIdx.x; | ||||||
|  |   Iterator gridSize = blockSize*2*gridDim.x; | ||||||
|  |   sobj mySum = Zero(); | ||||||
|  |    | ||||||
|  |   while (i < n) { | ||||||
|  |     Iterator lane = i % nsimd; | ||||||
|  |     Iterator ss   = i / nsimd; | ||||||
|  |     auto tmp = extractLane(lane,g_idata[ss]); | ||||||
|  |     sobj tmpD; | ||||||
|  |     tmpD=tmp; | ||||||
|  |     mySum   +=tmpD; | ||||||
|  |      | ||||||
|  |     if (i + blockSize < n) { | ||||||
|  |       lane = (i+blockSize) % nsimd; | ||||||
|  |       ss   = (i+blockSize) / nsimd; | ||||||
|  |       tmp = extractLane(lane,g_idata[ss]); | ||||||
|  |       tmpD = tmp; | ||||||
|  |       mySum += tmpD; | ||||||
|  |     } | ||||||
|  |     i += gridSize; | ||||||
|  |   } | ||||||
|  |    | ||||||
|  |   // copy mySum to shared memory and perform | ||||||
|  |   // reduction for all threads in this block | ||||||
|  |   reduceBlock(sdata, mySum, tid); | ||||||
|  |   if (tid == 0) g_odata[blockIdx.x] = sdata[0]; | ||||||
|  | } | ||||||
|  |  | ||||||
|  | template <class vobj, class sobj,class Iterator> | ||||||
|  | __global__ void reduceKernel(const vobj *lat, sobj *buffer, Iterator n) { | ||||||
|  |    | ||||||
|  |   Iterator blockSize = blockDim.x; | ||||||
|  |    | ||||||
|  |   // perform reduction for this block and | ||||||
|  |   // write result to global memory buffer | ||||||
|  |   reduceBlocks(lat, buffer, n); | ||||||
|  |    | ||||||
|  |   if (gridDim.x > 1) { | ||||||
|  |      | ||||||
|  |     const Iterator tid = threadIdx.x; | ||||||
|  |     __shared__ bool amLast; | ||||||
|  |     // force shared memory alignment | ||||||
|  |     extern __shared__ __align__(COALESCE_GRANULARITY) unsigned char shmem_pointer[]; | ||||||
|  |     // it's not possible to have two extern __shared__ arrays with same name | ||||||
|  |     // but different types in different scopes -- need to cast each time | ||||||
|  |     sobj *smem = (sobj *)shmem_pointer; | ||||||
|  |      | ||||||
|  |     // wait until all outstanding memory instructions in this thread are finished | ||||||
|  |     acceleratorFence(); | ||||||
|  |      | ||||||
|  |     if (tid==0) { | ||||||
|  |       unsigned int ticket = atomicInc(&retirementCount, gridDim.x); | ||||||
|  |       // true if this block is the last block to be done | ||||||
|  |       amLast = (ticket == gridDim.x-1); | ||||||
|  |     } | ||||||
|  |      | ||||||
|  |     // each thread must read the correct value of amLast | ||||||
|  |     acceleratorSynchroniseAll(); | ||||||
|  |  | ||||||
|  |     if (amLast) { | ||||||
|  |       // reduce buffer[0], ..., buffer[gridDim.x-1] | ||||||
|  |       Iterator i = tid; | ||||||
|  |       sobj mySum = Zero(); | ||||||
|  |        | ||||||
|  |       while (i < gridDim.x) { | ||||||
|  |         mySum += buffer[i]; | ||||||
|  |         i += blockSize; | ||||||
|  |       } | ||||||
|  |        | ||||||
|  |       reduceBlock(smem, mySum, tid); | ||||||
|  |        | ||||||
|  |       if (tid==0) { | ||||||
|  |         buffer[0] = smem[0]; | ||||||
|  |         // reset count variable | ||||||
|  |         retirementCount = 0; | ||||||
|  |       } | ||||||
|  |     } | ||||||
|  |   } | ||||||
|  | } | ||||||
|  |  | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Possibly promote to double and sum | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class vobj> | ||||||
|  | inline typename vobj::scalar_objectD sumD_gpu(const vobj *lat, Integer osites)  | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_objectD sobj; | ||||||
|  |   typedef decltype(lat) Iterator; | ||||||
|  |    | ||||||
|  |   Integer nsimd= vobj::Nsimd(); | ||||||
|  |   Integer size = osites*nsimd; | ||||||
|  |  | ||||||
|  |   Integer numThreads, numBlocks; | ||||||
|  |   getNumBlocksAndThreads(size, sizeof(sobj), numThreads, numBlocks); | ||||||
|  |   Integer smemSize = numThreads * sizeof(sobj); | ||||||
|  |  | ||||||
|  |   Vector<sobj> buffer(numBlocks); | ||||||
|  |   sobj *buffer_v = &buffer[0]; | ||||||
|  |    | ||||||
|  |   reduceKernel<<< numBlocks, numThreads, smemSize >>>(lat, buffer_v, size); | ||||||
|  |   accelerator_barrier(); | ||||||
|  |   auto result = buffer_v[0]; | ||||||
|  |   return result; | ||||||
|  | } | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | // Return as same precision as input performing reduction in double precision though | ||||||
|  | ///////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||||
|  | template <class vobj> | ||||||
|  | inline typename vobj::scalar_object sum_gpu(const vobj *lat, Integer osites)  | ||||||
|  | { | ||||||
|  |   typedef typename vobj::scalar_object sobj; | ||||||
|  |   sobj result; | ||||||
|  |   result = sumD_gpu(lat,osites); | ||||||
|  |   return result; | ||||||
|  | } | ||||||
|  |  | ||||||
|  |  | ||||||
|  |  | ||||||
|  | NAMESPACE_END(Grid); | ||||||
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