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|  | 0cd6b1858c | 
							
								
								
									
										54
									
								
								.github/ISSUE_TEMPLATE/bug-report.yml
									
									
									
									
										vendored
									
									
										Normal file
									
								
							
							
						
						
									
										54
									
								
								.github/ISSUE_TEMPLATE/bug-report.yml
									
									
									
									
										vendored
									
									
										Normal file
									
								
							| @@ -0,0 +1,54 @@ | ||||
| name: Bug report | ||||
| description: Report a bug. | ||||
| title: "<insert title>" | ||||
| labels: [bug] | ||||
|  | ||||
| body: | ||||
|   - type: markdown | ||||
|     attributes: | ||||
|       value: > | ||||
|         Thank you for taking the time to file a bug report. | ||||
|         Please check that the code is pointing to the HEAD of develop | ||||
|         or any commit in master which is tagged with a version number. | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Describe the issue:" | ||||
|       description: > | ||||
|         Describe the issue and any previous attempt to solve it. | ||||
|     validations: | ||||
|       required: true | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Code example:" | ||||
|       description: > | ||||
|         If relevant, show how to reproduce the issue using a minimal working | ||||
|         example. | ||||
|       placeholder: | | ||||
|         << your code here >> | ||||
|       render: shell | ||||
|     validations: | ||||
|       required: false | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Target platform:" | ||||
|       description: > | ||||
|         Give a description of the target platform (CPU, network, compiler). | ||||
|         Please give the full CPU part description, using for example | ||||
|         `cat /proc/cpuinfo | grep 'model name' | uniq` (Linux) | ||||
|         or `sysctl machdep.cpu.brand_string` (macOS) and the full output | ||||
|         the `--version` option of your compiler. | ||||
|     validations: | ||||
|       required: true | ||||
|  | ||||
|   - type: textarea | ||||
|     attributes: | ||||
|       label: "Configure options:" | ||||
|       description: > | ||||
|         Please give the exact configure command used and attach | ||||
|         `config.log`, `grid.config.summary` and the output of `make V=1`. | ||||
|       render: shell | ||||
|     validations: | ||||
|       required: true | ||||
							
								
								
									
										27
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							
							
						
						
									
										27
									
								
								.gitignore
									
									
									
									
										vendored
									
									
								
							| @@ -1,3 +1,7 @@ | ||||
| # Doxygen stuff | ||||
| html/* | ||||
| latex/* | ||||
|  | ||||
| # Compiled Object files # | ||||
| ######################### | ||||
| *.slo | ||||
| @@ -83,24 +87,24 @@ ltmain.sh | ||||
| .Trashes | ||||
| ehthumbs.db | ||||
| Thumbs.db | ||||
| .dirstamp | ||||
|  | ||||
| # build directory # | ||||
| ################### | ||||
| build*/* | ||||
| Documentation/_build | ||||
|  | ||||
| # IDE related files # | ||||
| ##################### | ||||
| *.xcodeproj/* | ||||
| build.sh | ||||
| .vscode | ||||
| *.code-workspace | ||||
|  | ||||
| # Eigen source # | ||||
| ################ | ||||
| lib/Eigen/* | ||||
|  | ||||
| # FFTW source # | ||||
| ################ | ||||
| lib/fftw/* | ||||
| Grid/Eigen | ||||
| Eigen/* | ||||
|  | ||||
| # libtool macros # | ||||
| ################## | ||||
| @@ -111,15 +115,8 @@ m4/libtool.m4 | ||||
| ################ | ||||
| gh-pages/ | ||||
|  | ||||
| # Buck files # | ||||
| ############## | ||||
| .buck* | ||||
| buck-out | ||||
| BUCK | ||||
| make-bin-BUCK.sh | ||||
|  | ||||
| # generated sources # | ||||
| ##################### | ||||
| lib/qcd/spin/gamma-gen/*.h | ||||
| lib/qcd/spin/gamma-gen/*.cc | ||||
|  | ||||
| Grid/qcd/spin/gamma-gen/*.h | ||||
| Grid/qcd/spin/gamma-gen/*.cc | ||||
| Grid/util/Version.h | ||||
|   | ||||
							
								
								
									
										46
									
								
								.travis.yml
									
									
									
									
									
								
							
							
						
						
									
										46
									
								
								.travis.yml
									
									
									
									
									
								
							| @@ -1,46 +0,0 @@ | ||||
| language: cpp | ||||
|  | ||||
| cache: | ||||
|   directories: | ||||
|     - clang | ||||
|  | ||||
| matrix: | ||||
|   include: | ||||
|     - os:        osx | ||||
|       osx_image: xcode8.3 | ||||
|       compiler: clang | ||||
|        | ||||
| before_install: | ||||
|     - export GRIDDIR=`pwd` | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]] && [ ! -e clang/bin ]; then wget $CLANG_LINK; tar -xf `basename $CLANG_LINK`; mkdir clang; mv clang+*/* clang/; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export PATH="${GRIDDIR}/clang/bin:${PATH}"; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "linux" ]] && [[ "$CC" == "clang" ]]; then export LD_LIBRARY_PATH="${GRIDDIR}/clang/lib:${LD_LIBRARY_PATH}"; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew update; fi | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then brew install libmpc; fi | ||||
|      | ||||
| install: | ||||
|     - export CC=$CC$VERSION | ||||
|     - export CXX=$CXX$VERSION | ||||
|     - echo $PATH | ||||
|     - which autoconf | ||||
|     - autoconf  --version | ||||
|     - which automake | ||||
|     - automake  --version | ||||
|     - which $CC | ||||
|     - $CC  --version | ||||
|     - which $CXX | ||||
|     - $CXX --version | ||||
|     - if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then export LDFLAGS='-L/usr/local/lib'; fi | ||||
|      | ||||
| script: | ||||
|     - ./bootstrap.sh | ||||
|     - mkdir build | ||||
|     - cd build | ||||
|     - ../configure --enable-precision=single --enable-simd=SSE4 --enable-comms=none | ||||
|     - make -j4  | ||||
|     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals | ||||
|     - echo make clean | ||||
|     - ../configure --enable-precision=double --enable-simd=SSE4 --enable-comms=none | ||||
|     - make -j4 | ||||
|     - ./benchmarks/Benchmark_dwf --threads 1 --debug-signals | ||||
|     - make check | ||||
							
								
								
									
										1125
									
								
								BLAS_benchmark/BatchBlasBench.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										1125
									
								
								BLAS_benchmark/BatchBlasBench.cc
									
									
									
									
									
										Normal file
									
								
							
										
											
												File diff suppressed because it is too large
												Load Diff
											
										
									
								
							
							
								
								
									
										2
									
								
								BLAS_benchmark/compile-command
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										2
									
								
								BLAS_benchmark/compile-command
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,2 @@ | ||||
|  | ||||
| mpicxx -qmkl=parallel -fsycl BatchBlasBench.cc -o BatchBlasBench -DGRID_SYCL | ||||
							
								
								
									
										5
									
								
								BLAS_benchmark/compile-command-frontier
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										5
									
								
								BLAS_benchmark/compile-command-frontier
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,5 @@ | ||||
| CXX=hipcc | ||||
| MPICXX=mpicxx  | ||||
| CXXFLAGS="-fPIC -I{$ROCM_PATH}/include/ -I${MPICH_DIR}/include -L/lib64 -I/opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3/include -DGRID_HIP" | ||||
| LDFLAGS="-L/lib64 -L${MPICH_DIR}/lib -lmpi -L${CRAY_MPICH_ROOTDIR}/gtl/lib -lmpi_gtl_hsa -lamdhip64 -lhipblas -lrocblas -lmpi_gnu_123" | ||||
| hipcc $CXXFLAGS $LDFLAGS BatchBlasBench.cc -o BatchBlasBench | ||||
							
								
								
									
										2
									
								
								BLAS_benchmark/compile-command-sunspot
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										2
									
								
								BLAS_benchmark/compile-command-sunspot
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,2 @@ | ||||
|  | ||||
| mpicxx -qmkl=parallel -fsycl BatchBlasBench.cc -o BatchBlasBench -DGRID_SYCL | ||||
| @@ -0,0 +1,5 @@ | ||||
| Version : 0.8.0 | ||||
|  | ||||
| - Clang 3.5 and above, ICPC v16 and above, GCC 6.3 and above recommended | ||||
| - MPI and MPI3 comms optimisations for KNL and OPA finished | ||||
| - Half precision comms | ||||
|   | ||||
							
								
								
									
										73
									
								
								Grid/DisableWarnings.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										73
									
								
								Grid/DisableWarnings.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,73 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/DisableWarnings.h | ||||
|  | ||||
| Copyright (C) 2016 | ||||
|  | ||||
| Author: Guido Cossu <guido.cossu@ed.ac.uk> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #ifndef DISABLE_WARNINGS_H | ||||
| #define DISABLE_WARNINGS_H | ||||
|  | ||||
|  | ||||
|  | ||||
| #if defined __GNUC__ && __GNUC__>=6 | ||||
| #pragma GCC diagnostic ignored "-Wignored-attributes" | ||||
| #endif | ||||
|  | ||||
|  //disables and intel compiler specific warning (in json.hpp) | ||||
| #ifdef __ICC | ||||
| #pragma warning disable 488   | ||||
| #endif | ||||
|  | ||||
| #ifdef __NVCC__ | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma clang diagnostic ignored "-Wdeprecated-register" | ||||
|  | ||||
| #ifdef __NVCC_DIAG_PRAGMA_SUPPORT__ | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma nv_diag_suppress unsigned_compare_with_zero | ||||
| #pragma nv_diag_suppress cast_to_qualified_type | ||||
|  //disables nvcc specific warning in many files | ||||
| #pragma nv_diag_suppress esa_on_defaulted_function_ignored | ||||
| #pragma nv_diag_suppress extra_semicolon | ||||
| #else | ||||
|  //disables nvcc specific warning in json.hpp | ||||
| #pragma diag_suppress unsigned_compare_with_zero | ||||
| #pragma diag_suppress cast_to_qualified_type | ||||
|  //disables nvcc specific warning in many files | ||||
| #pragma diag_suppress esa_on_defaulted_function_ignored | ||||
| #pragma diag_suppress extra_semicolon | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| // Disable vectorisation in Eigen on the Power8/9 and PowerPC | ||||
| #ifdef  __ALTIVEC__ | ||||
| #define  EIGEN_DONT_VECTORIZE | ||||
| #endif | ||||
| #ifdef  __VSX__ | ||||
| #define  EIGEN_DONT_VECTORIZE | ||||
| #endif | ||||
|  | ||||
| #endif | ||||
| @@ -42,6 +42,7 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/GridQCDcore.h> | ||||
| #include <Grid/qcd/action/Action.h> | ||||
| #include <Grid/qcd/utils/GaugeFix.h> | ||||
| #include <Grid/qcd/utils/CovariantSmearing.h> | ||||
| #include <Grid/qcd/smearing/Smearing.h> | ||||
| #include <Grid/parallelIO/MetaData.h> | ||||
| #include <Grid/qcd/hmc/HMC_aggregate.h> | ||||
| @@ -38,23 +38,30 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #ifndef GRID_BASE_H | ||||
| #define GRID_BASE_H | ||||
| 
 | ||||
| #include <Grid/GridStd.h> | ||||
| 
 | ||||
| #include <Grid/DisableWarnings.h> | ||||
| #include <Grid/Namespace.h> | ||||
| #include <Grid/GridStd.h> | ||||
| #include <Grid/threads/Pragmas.h> | ||||
| #include <Grid/perfmon/Timer.h> | ||||
| #include <Grid/perfmon/PerfCount.h> | ||||
| #include <Grid/log/Log.h> | ||||
| #include <Grid/allocator/AlignedAllocator.h> | ||||
| #include <Grid/simd/Simd.h> | ||||
| #include <Grid/serialisation/Serialisation.h> | ||||
| #include <Grid/threads/Threads.h> | ||||
| //#include <Grid/perfmon/PerfCount.h>
 | ||||
| #include <Grid/util/Util.h> | ||||
| #include <Grid/log/Log.h> | ||||
| #include <Grid/perfmon/Tracing.h> | ||||
| #include <Grid/allocator/Allocator.h> | ||||
| #include <Grid/simd/Simd.h> | ||||
| #include <Grid/threads/ThreadReduction.h> | ||||
| #include <Grid/serialisation/Serialisation.h> | ||||
| #include <Grid/util/Sha.h> | ||||
| #include <Grid/communicator/Communicator.h>  | ||||
| #include <Grid/cartesian/Cartesian.h>     | ||||
| #include <Grid/tensors/Tensors.h>       | ||||
| #include <Grid/lattice/Lattice.h>       | ||||
| #include <Grid/cshift/Cshift.h>        | ||||
| #include <Grid/stencil/Stencil.h>       | ||||
| #include <Grid/stencil/GeneralLocalStencil.h>       | ||||
| #include <Grid/parallelIO/BinaryIO.h> | ||||
| #include <Grid/algorithms/Algorithms.h>    | ||||
| NAMESPACE_CHECK(GridCore) | ||||
| 
 | ||||
| #endif | ||||
| @@ -36,7 +36,9 @@ Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| #include <Grid/GridCore.h> | ||||
| #include <Grid/qcd/QCD.h> | ||||
| #include <Grid/qcd/spin/Spin.h> | ||||
| #include <Grid/qcd/gparity/Gparity.h> | ||||
| #include <Grid/qcd/utils/Utils.h> | ||||
| #include <Grid/qcd/representations/Representations.h> | ||||
| NAMESPACE_CHECK(GridQCDCore); | ||||
| 
 | ||||
| #endif | ||||
| @@ -6,7 +6,9 @@ | ||||
| ///////////////////
 | ||||
| #include <cassert> | ||||
| #include <complex> | ||||
| #include <memory> | ||||
| #include <vector> | ||||
| #include <array> | ||||
| #include <string> | ||||
| #include <iostream> | ||||
| #include <iomanip> | ||||
| @@ -14,6 +16,7 @@ | ||||
| #include <functional> | ||||
| #include <stdio.h> | ||||
| #include <stdlib.h> | ||||
| #include <strings.h> | ||||
| #include <stdio.h> | ||||
| #include <signal.h> | ||||
| #include <ctime> | ||||
| @@ -26,4 +29,7 @@ | ||||
| ///////////////////
 | ||||
| #include "Config.h" | ||||
| 
 | ||||
| #ifdef TOFU | ||||
| #undef GRID_COMMS_THREADS | ||||
| #endif | ||||
| #endif /* GRID_STD_H */ | ||||
							
								
								
									
										75
									
								
								Grid/Grid_Eigen_Dense.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										75
									
								
								Grid/Grid_Eigen_Dense.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,75 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #pragma once | ||||
| // Force Eigen to use MKL if Grid has been configured with --enable-mkl | ||||
| #ifdef USE_MKL | ||||
| #define EIGEN_USE_MKL_ALL | ||||
| #endif | ||||
|  | ||||
|  | ||||
| #if defined __GNUC__ | ||||
| #pragma GCC diagnostic push | ||||
| #pragma GCC diagnostic ignored "-Wdeprecated-declarations" | ||||
| #endif | ||||
|  | ||||
| /* NVCC save and restore compile environment*/ | ||||
| #ifdef __NVCC__ | ||||
| #pragma push | ||||
| #ifdef __NVCC_DIAG_PRAGMA_SUPPORT__ | ||||
| #pragma nv_diag_suppress code_is_unreachable | ||||
| #else | ||||
| #pragma diag_suppress code_is_unreachable | ||||
| #endif | ||||
| #pragma push_macro("__CUDA_ARCH__") | ||||
| #pragma push_macro("__NVCC__") | ||||
| #pragma push_macro("__CUDACC__") | ||||
| #undef __CUDA_ARCH__ | ||||
| #undef __NVCC__ | ||||
| #undef __CUDACC__ | ||||
| #define __NVCC__REDEFINE__ | ||||
| #endif  | ||||
|  | ||||
| /* SYCL save and restore compile environment*/ | ||||
| #ifdef GRID_SYCL | ||||
| #pragma push | ||||
| #pragma push_macro("__SYCL_DEVICE_ONLY__") | ||||
| #undef __SYCL_DEVICE_ONLY__ | ||||
| #define EIGEN_DONT_VECTORIZE | ||||
| #undef EIGEN_USE_SYCL | ||||
| #define __SYCL__REDEFINE__ | ||||
| #endif | ||||
|  | ||||
| /* HIP save and restore compile environment*/ | ||||
| #ifdef GRID_HIP | ||||
| #pragma push | ||||
| #pragma push_macro("__HIP_DEVICE_COMPILE__") | ||||
| #endif | ||||
| #define EIGEN_NO_HIP | ||||
|  | ||||
| #include <Grid/Eigen/Dense> | ||||
| #include <Grid/Eigen/unsupported/CXX11/Tensor> | ||||
|  | ||||
| /* NVCC restore */ | ||||
| #ifdef __NVCC__REDEFINE__ | ||||
| #pragma pop_macro("__CUDACC__") | ||||
| #pragma pop_macro("__NVCC__") | ||||
| #pragma pop_macro("__CUDA_ARCH__") | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| /*SYCL restore*/ | ||||
| #ifdef __SYCL__REDEFINE__ | ||||
| #pragma pop_macro("__SYCL_DEVICE_ONLY__") | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| /*HIP restore*/ | ||||
| #ifdef __HIP__REDEFINE__ | ||||
| #pragma pop_macro("__HIP_DEVICE_COMPILE__") | ||||
| #pragma pop | ||||
| #endif | ||||
|  | ||||
| #if defined __GNUC__ | ||||
| #pragma GCC diagnostic pop | ||||
| #endif | ||||
|  | ||||
|  | ||||
							
								
								
									
										1
									
								
								Grid/Grid_Eigen_Tensor.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										1
									
								
								Grid/Grid_Eigen_Tensor.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1 @@ | ||||
| #include <Grid/Grid_Eigen_Dense.h> | ||||
							
								
								
									
										81
									
								
								Grid/Makefile.am
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										81
									
								
								Grid/Makefile.am
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,81 @@ | ||||
| extra_sources= | ||||
| extra_headers= | ||||
|  | ||||
| if BUILD_COMMS_MPI3 | ||||
|   extra_sources+=communicator/Communicator_mpi3.cc | ||||
|   extra_sources+=communicator/Communicator_base.cc | ||||
|   extra_sources+=communicator/SharedMemoryMPI.cc | ||||
|   extra_sources+=communicator/SharedMemory.cc | ||||
| endif | ||||
|  | ||||
| if BUILD_COMMS_NONE | ||||
|   extra_sources+=communicator/Communicator_none.cc | ||||
|   extra_sources+=communicator/Communicator_base.cc | ||||
|   extra_sources+=communicator/SharedMemoryNone.cc | ||||
|   extra_sources+=communicator/SharedMemory.cc | ||||
| endif | ||||
|  | ||||
| if BUILD_HDF5 | ||||
|   extra_sources+=serialisation/Hdf5IO.cc  | ||||
|   extra_headers+=serialisation/Hdf5IO.h | ||||
|   extra_headers+=serialisation/Hdf5Type.h | ||||
| endif | ||||
|  | ||||
|  | ||||
| all: version-cache Version.h | ||||
|  | ||||
| version-cache: | ||||
| 	@if [ `git status --porcelain | grep -v '??' | wc -l` -gt 0 ]; then\ | ||||
| 		a="uncommited changes";\ | ||||
| 	else\ | ||||
| 		a="clean";\ | ||||
| 	fi;\ | ||||
| 	echo "`git log -n 1 --format=format:"#define GITHASH \\"%H:%d $$a\\"%n" HEAD`" > vertmp;\ | ||||
| 	if [ -e version-cache ]; then\ | ||||
| 		d=`diff vertmp version-cache`;\ | ||||
| 		if [ "$${d}" != "" ]; then\ | ||||
| 			mv vertmp version-cache;\ | ||||
| 			rm -f Version.h;\ | ||||
| 		fi;\ | ||||
| 	else\ | ||||
| 		mv vertmp version-cache;\ | ||||
| 		rm -f Version.h;\ | ||||
| 	fi;\ | ||||
| 	rm -f vertmp | ||||
|  | ||||
| Version.h: version-cache | ||||
| 	cp version-cache Version.h | ||||
|  | ||||
| .PHONY: version-cache | ||||
|  | ||||
| # | ||||
| # Libraries | ||||
| # | ||||
| include Make.inc | ||||
| include Eigen.inc | ||||
|  | ||||
| extra_sources+=$(WILS_FERMION_FILES) | ||||
| extra_sources+=$(STAG_FERMION_FILES) | ||||
| if BUILD_ZMOBIUS | ||||
|   extra_sources+=$(ZWILS_FERMION_FILES) | ||||
| endif | ||||
| if BUILD_GPARITY | ||||
|   extra_sources+=$(GP_FERMION_FILES) | ||||
| endif | ||||
| if BUILD_FERMION_REPS | ||||
|   extra_sources+=$(ADJ_FERMION_FILES) | ||||
|   extra_sources+=$(TWOIND_FERMION_FILES) | ||||
| endif | ||||
| if BUILD_SP | ||||
|     extra_sources+=$(SP_FERMION_FILES) | ||||
|     extra_sources+=$(SP_TWOIND_FERMION_FILES) | ||||
| endif | ||||
|  | ||||
| lib_LIBRARIES = libGrid.a | ||||
|  | ||||
| CCFILES += $(extra_sources) | ||||
| HFILES  += $(extra_headers) Config.h Version.h | ||||
|  | ||||
| libGrid_a_SOURCES              = $(CCFILES) | ||||
| libGrid_adir                   = $(includedir)/Grid | ||||
| nobase_dist_pkginclude_HEADERS = $(HFILES) $(eigen_files) $(eigen_unsupp_files) | ||||
							
								
								
									
										43
									
								
								Grid/Namespace.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										43
									
								
								Grid/Namespace.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,43 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/Namespace.h | ||||
|  | ||||
| Copyright (C) 2016 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| #include <type_traits> | ||||
| #include <cassert> | ||||
| #include <exception> | ||||
|  | ||||
| #define NAMESPACE_BEGIN(A) namespace A { | ||||
| #define NAMESPACE_END(A)   } | ||||
| #define GRID_NAMESPACE_BEGIN NAMESPACE_BEGIN(Grid) | ||||
| #define GRID_NAMESPACE_END   NAMESPACE_END(Grid) | ||||
| #define NAMESPACE_CHECK(x) struct namespaceTEST##x {};  static_assert(std::is_same<namespaceTEST##x, ::namespaceTEST##x>::value,"Not in :: at"  );  | ||||
|  | ||||
| #define EXCEPTION_CHECK_BEGIN(A) try { | ||||
| #define EXCEPTION_CHECK_END(A)   } catch ( std::exception e ) { BACKTRACEFP(stderr); std::cerr << __PRETTY_FUNCTION__ << " : " <<__LINE__<< " Caught exception "<<e.what()<<std::endl; throw; } | ||||
|  | ||||
| @@ -29,45 +29,56 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #ifndef GRID_ALGORITHMS_H | ||||
| #define GRID_ALGORITHMS_H | ||||
| 
 | ||||
| NAMESPACE_CHECK(blas); | ||||
| #include <Grid/algorithms/blas/BatchedBlas.h> | ||||
| 
 | ||||
| NAMESPACE_CHECK(algorithms); | ||||
| #include <Grid/algorithms/SparseMatrix.h> | ||||
| #include <Grid/algorithms/LinearOperator.h> | ||||
| #include <Grid/algorithms/Preconditioner.h> | ||||
| NAMESPACE_CHECK(SparseMatrix); | ||||
| 
 | ||||
| #include <Grid/algorithms/approx/Zolotarev.h> | ||||
| #include <Grid/algorithms/approx/Chebyshev.h> | ||||
| #include <Grid/algorithms/approx/JacobiPolynomial.h> | ||||
| #include <Grid/algorithms/approx/Remez.h> | ||||
| #include <Grid/algorithms/approx/MultiShiftFunction.h> | ||||
| 
 | ||||
| #include <Grid/algorithms/approx/Forecast.h> | ||||
| #include <Grid/algorithms/approx/RemezGeneral.h> | ||||
| #include <Grid/algorithms/approx/ZMobius.h> | ||||
| NAMESPACE_CHECK(approx); | ||||
| #include <Grid/algorithms/deflation/Deflation.h> | ||||
| #include <Grid/algorithms/deflation/MultiRHSBlockProject.h> | ||||
| #include <Grid/algorithms/deflation/MultiRHSDeflation.h> | ||||
| #include <Grid/algorithms/deflation/MultiRHSBlockCGLinalg.h> | ||||
| NAMESPACE_CHECK(deflation); | ||||
| #include <Grid/algorithms/iterative/ConjugateGradient.h> | ||||
| NAMESPACE_CHECK(ConjGrad); | ||||
| #include <Grid/algorithms/iterative/BiCGSTAB.h> | ||||
| NAMESPACE_CHECK(BiCGSTAB); | ||||
| #include <Grid/algorithms/iterative/ConjugateResidual.h> | ||||
| #include <Grid/algorithms/iterative/NormalEquations.h> | ||||
| #include <Grid/algorithms/iterative/SchurRedBlack.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShift.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrec.h> | ||||
| 
 | ||||
| // Lanczos support
 | ||||
| //#include <Grid/algorithms/iterative/MatrixUtils.h>
 | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h> | ||||
| #include <Grid/algorithms/iterative/BiCGSTABMixedPrec.h> | ||||
| #include <Grid/algorithms/iterative/BlockConjugateGradient.h> | ||||
| #include <Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h> | ||||
| #include <Grid/algorithms/iterative/MinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/GeneralisedMinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/CommunicationAvoidingGeneralisedMinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/FlexibleCommunicationAvoidingGeneralisedMinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/MixedPrecisionFlexibleGeneralisedMinimalResidual.h> | ||||
| #include <Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h> | ||||
| #include <Grid/algorithms/CoarsenedMatrix.h> | ||||
| #include <Grid/algorithms/iterative/PowerMethod.h> | ||||
| #include <Grid/algorithms/iterative/AdefGeneric.h> | ||||
| #include <Grid/algorithms/iterative/AdefMrhs.h> | ||||
| NAMESPACE_CHECK(PowerMethod); | ||||
| #include <Grid/algorithms/multigrid/MultiGrid.h> | ||||
| NAMESPACE_CHECK(multigrid); | ||||
| #include <Grid/algorithms/FFT.h> | ||||
| 
 | ||||
| // Eigen/lanczos
 | ||||
| // EigCg
 | ||||
| // MCR
 | ||||
| // Pcg
 | ||||
| // Multishift CG
 | ||||
| // Hdcg
 | ||||
| // GCR
 | ||||
| // etc..
 | ||||
| 
 | ||||
| // integrator/Leapfrog
 | ||||
| // integrator/Omelyan
 | ||||
| // integrator/ForceGradient
 | ||||
| 
 | ||||
| // montecarlo/hmc
 | ||||
| // montecarlo/rhmc
 | ||||
| // montecarlo/metropolis
 | ||||
| // etc...
 | ||||
| 
 | ||||
| 
 | ||||
| #endif | ||||
							
								
								
									
										303
									
								
								Grid/algorithms/FFT.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										303
									
								
								Grid/algorithms/FFT.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,303 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/Cshift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef _GRID_FFT_H_ | ||||
| #define _GRID_FFT_H_ | ||||
|  | ||||
| #ifdef HAVE_FFTW | ||||
| #if defined(USE_MKL) || defined(GRID_SYCL) | ||||
| #include <fftw/fftw3.h> | ||||
| #else | ||||
| #include <fftw3.h> | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class scalar> struct FFTW { }; | ||||
|  | ||||
| #ifdef HAVE_FFTW	 | ||||
| template<> struct FFTW<ComplexD> { | ||||
| public: | ||||
|  | ||||
|   typedef fftw_complex FFTW_scalar; | ||||
|   typedef fftw_plan    FFTW_plan; | ||||
|  | ||||
|   static FFTW_plan fftw_plan_many_dft(int rank, const int *n,int howmany, | ||||
| 				      FFTW_scalar *in, const int *inembed,		 | ||||
| 				      int istride, int idist,		 | ||||
| 				      FFTW_scalar *out, const int *onembed,		 | ||||
| 				      int ostride, int odist,		 | ||||
| 				      int sign, unsigned flags) { | ||||
|     return ::fftw_plan_many_dft(rank,n,howmany,in,inembed,istride,idist,out,onembed,ostride,odist,sign,flags); | ||||
|   }	   | ||||
|      | ||||
|   static void fftw_flops(const FFTW_plan p,double *add, double *mul, double *fmas){ | ||||
|     ::fftw_flops(p,add,mul,fmas); | ||||
|   } | ||||
|  | ||||
|   inline static void fftw_execute_dft(const FFTW_plan p,FFTW_scalar *in,FFTW_scalar *out) { | ||||
|     ::fftw_execute_dft(p,in,out); | ||||
|   } | ||||
|   inline static void fftw_destroy_plan(const FFTW_plan p) { | ||||
|     ::fftw_destroy_plan(p); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<> struct FFTW<ComplexF> { | ||||
| public: | ||||
|  | ||||
|   typedef fftwf_complex FFTW_scalar; | ||||
|   typedef fftwf_plan    FFTW_plan; | ||||
|  | ||||
|   static FFTW_plan fftw_plan_many_dft(int rank, const int *n,int howmany, | ||||
| 				      FFTW_scalar *in, const int *inembed,		 | ||||
| 				      int istride, int idist,		 | ||||
| 				      FFTW_scalar *out, const int *onembed,		 | ||||
| 				      int ostride, int odist,		 | ||||
| 				      int sign, unsigned flags) { | ||||
|     return ::fftwf_plan_many_dft(rank,n,howmany,in,inembed,istride,idist,out,onembed,ostride,odist,sign,flags); | ||||
|   }	   | ||||
|      | ||||
|   static void fftw_flops(const FFTW_plan p,double *add, double *mul, double *fmas){ | ||||
|     ::fftwf_flops(p,add,mul,fmas); | ||||
|   } | ||||
|  | ||||
|   inline static void fftw_execute_dft(const FFTW_plan p,FFTW_scalar *in,FFTW_scalar *out) { | ||||
|     ::fftwf_execute_dft(p,in,out); | ||||
|   } | ||||
|   inline static void fftw_destroy_plan(const FFTW_plan p) { | ||||
|     ::fftwf_destroy_plan(p); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| #endif | ||||
|  | ||||
| #ifndef FFTW_FORWARD | ||||
| #define FFTW_FORWARD (-1) | ||||
| #define FFTW_BACKWARD (+1) | ||||
| #endif | ||||
|  | ||||
| class FFT { | ||||
| private: | ||||
|      | ||||
|   GridCartesian *vgrid; | ||||
|   GridCartesian *sgrid; | ||||
|      | ||||
|   int Nd; | ||||
|   double flops; | ||||
|   double flops_call; | ||||
|   uint64_t usec; | ||||
|      | ||||
|   Coordinate dimensions; | ||||
|   Coordinate processors; | ||||
|   Coordinate processor_coor; | ||||
|      | ||||
| public: | ||||
|      | ||||
|   static const int forward=FFTW_FORWARD; | ||||
|   static const int backward=FFTW_BACKWARD; | ||||
|      | ||||
|   double Flops(void) {return flops;} | ||||
|   double MFlops(void) {return flops/usec;} | ||||
|   double USec(void)   {return (double)usec;}     | ||||
|  | ||||
|   FFT ( GridCartesian * grid ) : | ||||
|     vgrid(grid), | ||||
|     Nd(grid->_ndimension), | ||||
|     dimensions(grid->_fdimensions), | ||||
|     processors(grid->_processors), | ||||
|     processor_coor(grid->_processor_coor) | ||||
|   { | ||||
|     flops=0; | ||||
|     usec =0; | ||||
|     Coordinate layout(Nd,1); | ||||
|     sgrid = new GridCartesian(dimensions,layout,processors,*grid); | ||||
|   }; | ||||
|      | ||||
|   ~FFT ( void)  { | ||||
|     delete sgrid; | ||||
|   } | ||||
|      | ||||
|   template<class vobj> | ||||
|   void FFT_dim_mask(Lattice<vobj> &result,const Lattice<vobj> &source,Coordinate mask,int sign){ | ||||
|  | ||||
|     conformable(result.Grid(),vgrid); | ||||
|     conformable(source.Grid(),vgrid); | ||||
|     Lattice<vobj> tmp(vgrid); | ||||
|     tmp = source; | ||||
|     for(int d=0;d<Nd;d++){ | ||||
|       if( mask[d] ) { | ||||
| 	FFT_dim(result,tmp,d,sign); | ||||
| 	tmp=result; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   template<class vobj> | ||||
|   void FFT_all_dim(Lattice<vobj> &result,const Lattice<vobj> &source,int sign){ | ||||
|     Coordinate mask(Nd,1); | ||||
|     FFT_dim_mask(result,source,mask,sign); | ||||
|   } | ||||
|  | ||||
|  | ||||
|   template<class vobj> | ||||
|   void FFT_dim(Lattice<vobj> &result,const Lattice<vobj> &source,int dim, int sign){ | ||||
| #ifndef HAVE_FFTW | ||||
|     std::cerr << "FFTW is not compiled but is called"<<std::endl; | ||||
|     assert(0); | ||||
| #else | ||||
|     conformable(result.Grid(),vgrid); | ||||
|     conformable(source.Grid(),vgrid); | ||||
|  | ||||
|     int L = vgrid->_ldimensions[dim]; | ||||
|     int G = vgrid->_fdimensions[dim]; | ||||
|        | ||||
|     Coordinate layout(Nd,1); | ||||
|     Coordinate pencil_gd(vgrid->_fdimensions); | ||||
|        | ||||
|     pencil_gd[dim] = G*processors[dim]; | ||||
|        | ||||
|     // Pencil global vol LxLxGxLxL per node | ||||
|     GridCartesian pencil_g(pencil_gd,layout,processors,*vgrid); | ||||
|        | ||||
|     // Construct pencils | ||||
|     typedef typename vobj::scalar_object sobj; | ||||
|     typedef typename sobj::scalar_type   scalar; | ||||
|        | ||||
|     Lattice<sobj> pgbuf(&pencil_g); | ||||
|     autoView(pgbuf_v , pgbuf, CpuWrite); | ||||
|     std::cout << "CPU view" << std::endl; | ||||
|      | ||||
|     typedef typename FFTW<scalar>::FFTW_scalar FFTW_scalar; | ||||
|     typedef typename FFTW<scalar>::FFTW_plan   FFTW_plan; | ||||
|        | ||||
|     int Ncomp = sizeof(sobj)/sizeof(scalar); | ||||
|     int Nlow  = 1; | ||||
|     for(int d=0;d<dim;d++){ | ||||
|       Nlow*=vgrid->_ldimensions[d]; | ||||
|     } | ||||
|        | ||||
|     int rank = 1;  /* 1d transforms */ | ||||
|     int n[] = {G}; /* 1d transforms of length G */ | ||||
|     int howmany = Ncomp; | ||||
|     int odist,idist,istride,ostride; | ||||
|     idist   = odist   = 1;          /* Distance between consecutive FT's */ | ||||
|     istride = ostride = Ncomp*Nlow; /* distance between two elements in the same FT */ | ||||
|     int *inembed = n, *onembed = n; | ||||
|        | ||||
|     scalar div; | ||||
|     if ( sign == backward ) div = 1.0/G; | ||||
|     else if ( sign == forward ) div = 1.0; | ||||
|     else assert(0); | ||||
|        | ||||
|     std::cout << GridLogPerformance<<"Making FFTW plan" << std::endl; | ||||
|     FFTW_plan p; | ||||
|     { | ||||
|       FFTW_scalar *in = (FFTW_scalar *)&pgbuf_v[0]; | ||||
|       FFTW_scalar *out= (FFTW_scalar *)&pgbuf_v[0]; | ||||
|       p = FFTW<scalar>::fftw_plan_many_dft(rank,n,howmany, | ||||
| 					   in,inembed, | ||||
| 					   istride,idist, | ||||
| 					   out,onembed, | ||||
| 					   ostride, odist, | ||||
| 					   sign,FFTW_ESTIMATE); | ||||
|     } | ||||
|        | ||||
|     // Barrel shift and collect global pencil | ||||
|     std::cout << GridLogPerformance<<"Making pencil" << std::endl; | ||||
|     Coordinate lcoor(Nd), gcoor(Nd); | ||||
|     result = source; | ||||
|     int pc = processor_coor[dim]; | ||||
|     for(int p=0;p<processors[dim];p++) { | ||||
|       { | ||||
| 	autoView(r_v,result,CpuRead); | ||||
| 	autoView(p_v,pgbuf,CpuWrite); | ||||
| 	thread_for(idx, sgrid->lSites(),{ | ||||
|           Coordinate cbuf(Nd); | ||||
|           sobj s; | ||||
| 	  sgrid->LocalIndexToLocalCoor(idx,cbuf); | ||||
| 	  peekLocalSite(s,r_v,cbuf); | ||||
| 	  cbuf[dim]+=((pc+p) % processors[dim])*L; | ||||
| 	  pokeLocalSite(s,p_v,cbuf); | ||||
|         }); | ||||
|       } | ||||
|       if (p != processors[dim] - 1) { | ||||
| 	result = Cshift(result,dim,L); | ||||
|       } | ||||
|     } | ||||
|        | ||||
|     std::cout <<GridLogPerformance<< "Looping orthog" << std::endl; | ||||
|     // Loop over orthog coords | ||||
|     int NN=pencil_g.lSites(); | ||||
|     GridStopWatch timer; | ||||
|     timer.Start(); | ||||
|     thread_for( idx,NN,{ | ||||
|         Coordinate cbuf(Nd); | ||||
| 	pencil_g.LocalIndexToLocalCoor(idx, cbuf); | ||||
| 	if ( cbuf[dim] == 0 ) {  // restricts loop to plane at lcoor[dim]==0 | ||||
| 	  FFTW_scalar *in = (FFTW_scalar *)&pgbuf_v[idx]; | ||||
| 	  FFTW_scalar *out= (FFTW_scalar *)&pgbuf_v[idx]; | ||||
| 	  FFTW<scalar>::fftw_execute_dft(p,in,out); | ||||
| 	} | ||||
|     }); | ||||
|     timer.Stop(); | ||||
|        | ||||
|     // performance counting | ||||
|     double add,mul,fma; | ||||
|     FFTW<scalar>::fftw_flops(p,&add,&mul,&fma); | ||||
|     flops_call = add+mul+2.0*fma; | ||||
|     usec += timer.useconds(); | ||||
|     flops+= flops_call*NN; | ||||
|        | ||||
|     std::cout <<GridLogPerformance<< "Writing back results " << std::endl; | ||||
|     // writing out result | ||||
|     { | ||||
|       autoView(pgbuf_v,pgbuf,CpuRead); | ||||
|       autoView(result_v,result,CpuWrite); | ||||
|       thread_for(idx,sgrid->lSites(),{ | ||||
| 	Coordinate clbuf(Nd), cgbuf(Nd); | ||||
| 	sobj s; | ||||
| 	sgrid->LocalIndexToLocalCoor(idx,clbuf); | ||||
| 	cgbuf = clbuf; | ||||
| 	cgbuf[dim] = clbuf[dim]+L*pc; | ||||
| 	peekLocalSite(s,pgbuf_v,cgbuf); | ||||
| 	pokeLocalSite(s,result_v,clbuf); | ||||
|       }); | ||||
|     } | ||||
|     result = result*div; | ||||
|        | ||||
|     std::cout <<GridLogPerformance<< "Destroying plan " << std::endl; | ||||
|     // destroying plan | ||||
|     FFTW<scalar>::fftw_destroy_plan(p); | ||||
| #endif | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										711
									
								
								Grid/algorithms/LinearOperator.h
									
									
									
									
									
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										711
									
								
								Grid/algorithms/LinearOperator.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,711 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/LinearOperator.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // LinearOperators Take a something and return a something. | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // | ||||
| // Hopefully linearity is satisfied and the AdjOp is indeed the Hermitian Conjugateugate (transpose if real): | ||||
| //SBase | ||||
| //   i)  F(a x + b y) = aF(x) + b F(y). | ||||
| //  ii)  <x|Op|y> = <y|AdjOp|x>^\ast | ||||
| // | ||||
| // Would be fun to have a test linearity & Herm Conj function! | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> class LinearOperatorBase { | ||||
| public: | ||||
|   // Support for coarsening to a multigrid | ||||
|   virtual void OpDiag (const Field &in, Field &out) = 0; // Abstract base | ||||
|   virtual void OpDir  (const Field &in, Field &out,int dir,int disp) = 0; // Abstract base | ||||
|   virtual void OpDirAll  (const Field &in, std::vector<Field> &out) = 0; // Abstract base | ||||
|  | ||||
|   virtual void Op     (const Field &in, Field &out) = 0; // Abstract base | ||||
|   virtual void AdjOp  (const Field &in, Field &out) = 0; // Abstract base | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2)=0; | ||||
|   virtual void HermOp(const Field &in, Field &out)=0; | ||||
|   virtual ~LinearOperatorBase(){}; | ||||
| }; | ||||
|  | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // By sharing the class for Sparse Matrix across multiple operator wrappers, we can share code | ||||
| // between RB and non-RB variants. Sparse matrix is like the fermion action def, and then | ||||
| // the wrappers implement the specialisation of "Op" and "AdjOp" to the cases minimising | ||||
| // replication of code. | ||||
| // | ||||
| // I'm not entirely happy with implementation; to share the Schur code between herm and non-herm | ||||
| // while still having a "OpAndNorm" in the abstract base I had to implement it in both cases | ||||
| // with an assert trap in the non-herm. This isn't right; there must be a better C++ way to | ||||
| // do it, but I fear it required multiple inheritance and mixed in abstract base classes | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| // Construct herm op from non-herm matrix | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> | ||||
| class MdagMLinearOperator : public LinearOperatorBase<Field> { | ||||
|   Matrix &_Mat; | ||||
| public: | ||||
|   MdagMLinearOperator(Matrix &Mat): _Mat(Mat){}; | ||||
|  | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     _Mat.Mdiag(in,out); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     _Mat.Mdir(in,out,dir,disp); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     _Mat.MdirAll(in,out); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     _Mat.Mdag(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     _Mat.MdagM(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.MdagM(in,out); | ||||
|   } | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
| class MMdagLinearOperator : public LinearOperatorBase<Field> { | ||||
|   Matrix &_Mat; | ||||
| public: | ||||
|   MMdagLinearOperator(Matrix &Mat): _Mat(Mat){}; | ||||
|  | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     _Mat.Mdiag(in,out); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     _Mat.Mdir(in,out,dir,disp); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     _Mat.MdirAll(in,out); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     _Mat.Mdag(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     _Mat.MMdag(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.MMdag(in,out); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| // Construct herm op and shift it for mgrid smoother | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> | ||||
| class ShiftedMdagMLinearOperator : public LinearOperatorBase<Field> { | ||||
|   Matrix &_Mat; | ||||
|   RealD _shift; | ||||
| public: | ||||
|   ShiftedMdagMLinearOperator(Matrix &Mat,RealD shift): _Mat(Mat), _shift(shift){}; | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     _Mat.Mdiag(in,out); | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     _Mat.Mdir(in,out,dir,disp); | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     assert(0); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|     assert(0); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     _Mat.Mdag(in,out); | ||||
|     assert(0); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.MdagM(in,out); | ||||
|     out = out + _shift*in; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| // Create a shifted HermOp | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| template<class Field> | ||||
| class ShiftedHermOpLinearOperator : public LinearOperatorBase<Field> { | ||||
|   LinearOperatorBase<Field> &_Mat; | ||||
|   RealD _shift; | ||||
| public: | ||||
|   ShiftedHermOpLinearOperator(LinearOperatorBase<Field> &Mat,RealD shift): _Mat(Mat), _shift(shift){}; | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     assert(0); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     HermOp(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     HermOp(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.HermOp(in,out); | ||||
|     out = out + _shift*in; | ||||
|   } | ||||
| }; | ||||
|  | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| // Wrap an already herm matrix | ||||
| //////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> | ||||
| class HermitianLinearOperator : public LinearOperatorBase<Field> { | ||||
|   Matrix &_Mat; | ||||
| public: | ||||
|   HermitianLinearOperator(Matrix &Mat): _Mat(Mat){}; | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     _Mat.Mdiag(in,out); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     _Mat.Mdir(in,out,dir,disp); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     _Mat.MdirAll(in,out); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot= innerProduct(in,out); n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Matrix,class Field> | ||||
| class NonHermitianLinearOperator : public LinearOperatorBase<Field> { | ||||
|   Matrix &_Mat; | ||||
| public: | ||||
|   NonHermitianLinearOperator(Matrix &Mat): _Mat(Mat){}; | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     _Mat.Mdiag(in,out); | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     _Mat.Mdir(in,out,dir,disp); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     _Mat.MdirAll(in,out); | ||||
|   }; | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     _Mat.M(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){ | ||||
|     _Mat.Mdag(in,out); | ||||
|   } | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     assert(0); | ||||
|   } | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     assert(0); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| ////////////////////////////////////////////////////////// | ||||
| // Even Odd Schur decomp operators; there are several | ||||
| // ways to introduce the even odd checkerboarding | ||||
| ////////////////////////////////////////////////////////// | ||||
|  | ||||
| template<class Field> | ||||
| class SchurOperatorBase :  public LinearOperatorBase<Field> { | ||||
|  public: | ||||
|   virtual  void Mpc      (const Field &in, Field &out) =0; | ||||
|   virtual  void MpcDag   (const Field &in, Field &out) =0; | ||||
|   virtual  void MpcDagMpc(const Field &in, Field &out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = in.Checkerboard(); | ||||
|     Mpc(in,tmp); | ||||
|     MpcDag(tmp,out); | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|     MpcDagMpc(in,out); | ||||
|     ComplexD dot= innerProduct(in,out);  | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
|   virtual void HermOp(const Field &in, Field &out){ | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|     MpcDagMpc(in,out); | ||||
|   } | ||||
|   void Op     (const Field &in, Field &out){ | ||||
|     Mpc(in,out); | ||||
|   } | ||||
|   void AdjOp     (const Field &in, Field &out){  | ||||
|     MpcDag(in,out); | ||||
|   } | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag (const Field &in, Field &out) { | ||||
|     assert(0); // must coarsen the unpreconditioned system | ||||
|   } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ | ||||
|     assert(0); | ||||
|   }; | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagMooeeOperator :  public SchurOperatorBase<Field> { | ||||
|  public: | ||||
|     Matrix &_Mat; | ||||
|     SchurDiagMooeeOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|     virtual  void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|       tmp.Checkerboard() = !in.Checkerboard(); | ||||
|        | ||||
|       _Mat.Meooe(in,tmp); | ||||
|       _Mat.MooeeInv(tmp,out); | ||||
|       _Mat.Meooe(out,tmp); | ||||
|       _Mat.Mooee(in,out); | ||||
|       axpy(out,-1.0,tmp,out); | ||||
|     } | ||||
|     virtual void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
| 	 | ||||
|       _Mat.MeooeDag(in,tmp); | ||||
|       _Mat.MooeeInvDag(tmp,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|       _Mat.MooeeDag(in,out); | ||||
|       axpy(out,-1.0,tmp,out); | ||||
|     } | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagOneOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|     Matrix &_Mat; | ||||
|  public: | ||||
|     SchurDiagOneOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|      | ||||
|     virtual void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|  | ||||
|       _Mat.Meooe(in,out); | ||||
|       _Mat.MooeeInv(out,tmp); | ||||
|       _Mat.Meooe(tmp,out); | ||||
|       _Mat.MooeeInv(out,tmp); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
|     virtual void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
|        | ||||
|       _Mat.MooeeInvDag(in,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|       _Mat.MooeeInvDag(tmp,out); | ||||
|       _Mat.MeooeDag(out,tmp); | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
| }; | ||||
| template<class Matrix,class Field> | ||||
|   class SchurDiagTwoOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|     Matrix &_Mat; | ||||
|  public: | ||||
|     SchurDiagTwoOperator (Matrix &Mat): _Mat(Mat){}; | ||||
|      | ||||
|     virtual void Mpc      (const Field &in, Field &out) { | ||||
|       Field tmp(in.Grid()); | ||||
|        | ||||
|       _Mat.MooeeInv(in,out); | ||||
|       _Mat.Meooe(out,tmp); | ||||
|       _Mat.MooeeInv(tmp,out); | ||||
|       _Mat.Meooe(out,tmp); | ||||
|        | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
|     virtual  void MpcDag   (const Field &in, Field &out){ | ||||
|       Field tmp(in.Grid()); | ||||
|  | ||||
|       _Mat.MeooeDag(in,out); | ||||
|       _Mat.MooeeInvDag(out,tmp); | ||||
|       _Mat.MeooeDag(tmp,out); | ||||
|       _Mat.MooeeInvDag(out,tmp); | ||||
|  | ||||
|       axpy(out,-1.0,tmp,in); | ||||
|     } | ||||
| }; | ||||
|  | ||||
| template<class Field> | ||||
| class NonHermitianSchurOperatorBase :  public LinearOperatorBase<Field>  | ||||
| { | ||||
|  public: | ||||
|   virtual void  Mpc      (const Field& in, Field& out) = 0; | ||||
|   virtual void  MpcDag   (const Field& in, Field& out) = 0; | ||||
|   virtual void  MpcDagMpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = in.Checkerboard(); | ||||
|     Mpc(in,tmp); | ||||
|     MpcDag(tmp,out); | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field& in, Field& out, RealD& n1, RealD& n2) { | ||||
|     assert(0); | ||||
|   } | ||||
|   virtual void HermOp(const Field& in, Field& out) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void Op(const Field& in, Field& out) { | ||||
|     Mpc(in, out); | ||||
|   } | ||||
|   void AdjOp(const Field& in, Field& out) {  | ||||
|     MpcDag(in, out); | ||||
|   } | ||||
|   // Support for coarsening to a multigrid | ||||
|   void OpDiag(const Field& in, Field& out) { | ||||
|     assert(0); // must coarsen the unpreconditioned system | ||||
|   } | ||||
|   void OpDir(const Field& in, Field& out, int dir, int disp) { | ||||
|     assert(0); | ||||
|   } | ||||
|   void OpDirAll(const Field& in, std::vector<Field>& out){ | ||||
|     assert(0); | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| template<class Matrix, class Field> | ||||
| class NonHermitianSchurDiagMooeeOperator :  public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  public: | ||||
|   Matrix& _Mat; | ||||
|  NonHermitianSchurDiagMooeeOperator(Matrix& Mat): _Mat(Mat){}; | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|     tmp.Checkerboard() = !in.Checkerboard(); | ||||
|      | ||||
|     _Mat.Meooe(in, tmp); | ||||
|     _Mat.MooeeInv(tmp, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|      | ||||
|     _Mat.Mooee(in, out); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, out); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MeooeDag(in, tmp); | ||||
|     _Mat.MooeeInvDag(tmp, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
| 	   | ||||
|     _Mat.MooeeDag(in, out); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, out); | ||||
|   } | ||||
| }; | ||||
|      | ||||
| template<class Matrix,class Field> | ||||
| class NonHermitianSchurDiagOneOperator : public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  protected: | ||||
|   Matrix &_Mat; | ||||
|    | ||||
|  public: | ||||
|   NonHermitianSchurDiagOneOperator (Matrix& Mat): _Mat(Mat){}; | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
| 	   | ||||
|     _Mat.Meooe(in, out); | ||||
|     _Mat.MooeeInv(out, tmp); | ||||
|     _Mat.Meooe(tmp, out); | ||||
|     _Mat.MooeeInv(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MooeeInvDag(in, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
|     _Mat.MooeeInvDag(tmp, out); | ||||
|     _Mat.MeooeDag(out, tmp); | ||||
|      | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Matrix, class Field> | ||||
| class NonHermitianSchurDiagTwoOperator : public NonHermitianSchurOperatorBase<Field>  | ||||
| { | ||||
|  protected: | ||||
|   Matrix& _Mat; | ||||
|    | ||||
|  public: | ||||
|  NonHermitianSchurDiagTwoOperator(Matrix& Mat): _Mat(Mat){}; | ||||
|  | ||||
|   virtual void Mpc(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MooeeInv(in, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|     _Mat.MooeeInv(tmp, out); | ||||
|     _Mat.Meooe(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
|   virtual void MpcDag(const Field& in, Field& out) { | ||||
|     Field tmp(in.Grid()); | ||||
|      | ||||
|     _Mat.MeooeDag(in, out); | ||||
|     _Mat.MooeeInvDag(out, tmp); | ||||
|     _Mat.MeooeDag(tmp, out); | ||||
|     _Mat.MooeeInvDag(out, tmp); | ||||
|  | ||||
|     axpy(out, -1.0, tmp, in); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Left  handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) psi = eta  -->  ( 1 - Moo^-1 Moe Mee^-1 Meo ) psi = Moo^-1 eta | ||||
| // Right handed Moo^-1 ; (Moo - Moe Mee^-1 Meo) Moo^-1 Moo psi = eta  -->  ( 1 - Moe Mee^-1 Meo Moo^-1) phi=eta ; psi = Moo^-1 phi | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> using SchurDiagOneRH = SchurDiagTwoOperator<Matrix,Field> ; | ||||
| template<class Matrix,class Field> using SchurDiagOneLH = SchurDiagOneOperator<Matrix,Field> ; | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| //  Staggered use | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Matrix,class Field> | ||||
| class SchurStaggeredOperator :  public SchurOperatorBase<Field> { | ||||
|  protected: | ||||
|   Matrix &_Mat; | ||||
|   Field tmp; | ||||
|   RealD mass; | ||||
|  public: | ||||
|   SchurStaggeredOperator (Matrix &Mat): _Mat(Mat), tmp(_Mat.RedBlackGrid())  | ||||
|   {  | ||||
|     assert( _Mat.isTrivialEE() ); | ||||
|     mass = _Mat.Mass(); | ||||
|   } | ||||
|   virtual void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     Mpc(in,out); | ||||
|     ComplexD dot= innerProduct(in,out); | ||||
|     n1 = real(dot); | ||||
|     n2 =0.0; | ||||
|   } | ||||
|   virtual void HermOp(const Field &in, Field &out){ | ||||
|     Mpc(in,out); | ||||
|     //    _Mat.Meooe(in,out); | ||||
|     //    _Mat.Meooe(out,tmp); | ||||
|     //    axpby(out,-1.0,mass*mass,tmp,in); | ||||
|   } | ||||
|   virtual  void Mpc      (const Field &in, Field &out)  | ||||
|   { | ||||
|     Field tmp(in.Grid()); | ||||
|     Field tmp2(in.Grid()); | ||||
| 	 | ||||
|     //    _Mat.Mooee(in,out); | ||||
|     //    _Mat.Mooee(out,tmp); | ||||
|  | ||||
|     _Mat.Meooe(in,out); | ||||
|     _Mat.Meooe(out,tmp); | ||||
|     axpby(out,-1.0,mass*mass,tmp,in); | ||||
|   } | ||||
|   virtual  void MpcDag   (const Field &in, Field &out){ | ||||
|     Mpc(in,out); | ||||
|   } | ||||
|   virtual void MpcDagMpc(const Field &in, Field &out) { | ||||
|     assert(0);// Never need with staggered | ||||
|   } | ||||
| }; | ||||
| template<class Matrix,class Field> using SchurStagOperator = SchurStaggeredOperator<Matrix,Field>; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for functions of operators | ||||
| ///////////////////////////////////////////////////////////// | ||||
| template<class Field> class OperatorFunction { | ||||
| public: | ||||
|   virtual void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) = 0; | ||||
|   virtual void operator() (LinearOperatorBase<Field> &Linop, const std::vector<Field> &in,std::vector<Field> &out) { | ||||
|     assert(in.size()==out.size()); | ||||
|     for(int k=0;k<in.size();k++){ | ||||
|       (*this)(Linop,in[k],out[k]); | ||||
|     } | ||||
|   }; | ||||
|   virtual ~OperatorFunction(){}; | ||||
| }; | ||||
|  | ||||
| template<class Field> class LinearFunction { | ||||
| public: | ||||
|   virtual void operator() (const Field &in, Field &out) = 0; | ||||
|  | ||||
|   virtual void operator() (const std::vector<Field> &in, std::vector<Field> &out) | ||||
|   { | ||||
|     assert(in.size() == out.size()); | ||||
|  | ||||
|     for (unsigned int i = 0; i < in.size(); ++i) | ||||
|     { | ||||
|       (*this)(in[i], out[i]); | ||||
|     } | ||||
|   } | ||||
|   virtual ~LinearFunction(){}; | ||||
| }; | ||||
|  | ||||
| template<class Field> class IdentityLinearFunction : public LinearFunction<Field> { | ||||
| public: | ||||
|   void operator() (const Field &in, Field &out){ | ||||
|     out = in; | ||||
|   }; | ||||
| }; | ||||
|  | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for Multishift solvers for operators | ||||
| ///////////////////////////////////////////////////////////// | ||||
| template<class Field> class OperatorMultiFunction { | ||||
| public: | ||||
|   virtual void operator() (LinearOperatorBase<Field> &Linop, const Field &in, std::vector<Field> &out) = 0; | ||||
| }; | ||||
|  | ||||
| // FIXME : To think about | ||||
|  | ||||
| // Chroma functionality list defining LinearOperator | ||||
| /* | ||||
|   virtual void operator() (T& chi, const T& psi, enum PlusMinus isign) const = 0; | ||||
|   virtual void operator() (T& chi, const T& psi, enum PlusMinus isign, Real epsilon) const | ||||
|   virtual const Subset& subset() const = 0; | ||||
|   virtual unsigned long nFlops() const { return 0; } | ||||
|   virtual void deriv(P& ds_u, const T& chi, const T& psi, enum PlusMinus isign) const | ||||
|   class UnprecLinearOperator : public DiffLinearOperator<T,P,Q> | ||||
|   const Subset& subset() const {return all;} | ||||
|   }; | ||||
| */ | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Hermitian operator Linear function and operator function | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> | ||||
| class HermOpOperatorFunction : public OperatorFunction<Field> { | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||
|     Linop.HermOp(in,out); | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| template<typename Field> | ||||
| class PlainHermOp : public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   LinearOperatorBase<Field> &_Linop; | ||||
|        | ||||
|   PlainHermOp(LinearOperatorBase<Field>& linop) : _Linop(linop)  | ||||
|   {} | ||||
|        | ||||
|   void operator()(const Field& in, Field& out) { | ||||
|     _Linop.HermOp(in,out); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<typename Field> | ||||
| class FunctionHermOp : public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator();  | ||||
|   OperatorFunction<Field>   & _poly; | ||||
|   LinearOperatorBase<Field> &_Linop; | ||||
|        | ||||
|   FunctionHermOp(OperatorFunction<Field> & poly,LinearOperatorBase<Field>& linop)  | ||||
|     : _poly(poly), _Linop(linop) {}; | ||||
|        | ||||
|   void operator()(const Field& in, Field& out) { | ||||
|     _poly(_Linop,in,out); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Field> | ||||
| class Polynomial : public OperatorFunction<Field> { | ||||
| private: | ||||
|   std::vector<RealD> Coeffs; | ||||
| public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   Polynomial(std::vector<RealD> &_Coeffs) : Coeffs(_Coeffs) { }; | ||||
|  | ||||
|   // Implement the required interface | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||
|  | ||||
|     Field AtoN(in.Grid()); | ||||
|     Field Mtmp(in.Grid()); | ||||
|     AtoN = in; | ||||
|     out = AtoN*Coeffs[0]; | ||||
|     for(int n=1;n<Coeffs.size();n++){ | ||||
|       Mtmp = AtoN; | ||||
|       Linop.HermOp(Mtmp,AtoN); | ||||
|       out=out+AtoN*Coeffs[n]; | ||||
|     } | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										52
									
								
								Grid/algorithms/Preconditioner.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										52
									
								
								Grid/algorithms/Preconditioner.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,52 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/Preconditioner.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_PRECONDITIONER_H | ||||
| #define GRID_PRECONDITIONER_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Field> using Preconditioner =  LinearFunction<Field> ; | ||||
|  | ||||
| /* | ||||
| template<class Field> class Preconditioner :  public LinearFunction<Field> { | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field & psi)=0; | ||||
| }; | ||||
| */ | ||||
|  | ||||
| template<class Field> class TrivialPrecon :  public Preconditioner<Field> {  | ||||
| public: | ||||
|   using Preconditioner<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field & psi){ | ||||
|     psi = src; | ||||
|   } | ||||
|   TrivialPrecon(void){}; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										86
									
								
								Grid/algorithms/SparseMatrix.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										86
									
								
								Grid/algorithms/SparseMatrix.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,86 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/SparseMatrix.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef  GRID_ALGORITHM_SPARSE_MATRIX_H | ||||
| #define  GRID_ALGORITHM_SPARSE_MATRIX_H | ||||
|  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Interface defining what I expect of a general sparse matrix, such as a Fermion action | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> class SparseMatrixBase { | ||||
| public: | ||||
|   virtual GridBase *Grid(void) =0; | ||||
|   // Full checkerboar operations | ||||
|   virtual void  M    (const Field &in, Field &out)=0; | ||||
|   virtual void  Mdag (const Field &in, Field &out)=0; | ||||
|   virtual void  MdagM(const Field &in, Field &out) { | ||||
|     Field tmp (in.Grid()); | ||||
|     M(in,tmp); | ||||
|     Mdag(tmp,out); | ||||
|   } | ||||
|   virtual void  MMdag(const Field &in, Field &out) { | ||||
|     Field tmp (in.Grid()); | ||||
|     Mdag(in,tmp); | ||||
|     M(tmp,out); | ||||
|   } | ||||
|   virtual  void Mdiag    (const Field &in, Field &out)=0; | ||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp)=0; | ||||
|   virtual  void MdirAll  (const Field &in, std::vector<Field> &out)=0; | ||||
|   virtual ~SparseMatrixBase() {}; | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Interface augmented by a red black sparse matrix, such as a Fermion action | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> class CheckerBoardedSparseMatrixBase : public SparseMatrixBase<Field> { | ||||
| public: | ||||
|   virtual GridBase *RedBlackGrid(void)=0; | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   // Query the even even properties to make algorithmic decisions | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   virtual RealD  Mass(void)        { return 0.0; }; | ||||
|   virtual int    ConstEE(void)     { return 1; }; // Disable assumptions unless overridden | ||||
|   virtual int    isTrivialEE(void) { return 0; }; // by a derived class that knows better | ||||
|  | ||||
|   // half checkerboard operaions | ||||
|   virtual  void Meooe    (const Field &in, Field &out)=0; | ||||
|   virtual  void Mooee    (const Field &in, Field &out)=0; | ||||
|   virtual  void MooeeInv (const Field &in, Field &out)=0; | ||||
|  | ||||
|   virtual  void MeooeDag    (const Field &in, Field &out)=0; | ||||
|   virtual  void MooeeDag    (const Field &in, Field &out)=0; | ||||
|   virtual  void MooeeInvDag (const Field &in, Field &out)=0; | ||||
|   virtual ~CheckerBoardedSparseMatrixBase() {}; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										414
									
								
								Grid/algorithms/approx/Chebyshev.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										414
									
								
								Grid/algorithms/approx/Chebyshev.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,414 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/approx/Chebyshev.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christoph Lehner <clehner@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CHEBYSHEV_H | ||||
| #define GRID_CHEBYSHEV_H | ||||
|  | ||||
| #include <Grid/algorithms/LinearOperator.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| struct ChebyParams : Serializable { | ||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(ChebyParams, | ||||
| 				  RealD, alpha,   | ||||
| 				  RealD, beta,    | ||||
| 				  int, Npoly); | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Generic Chebyshev approximations | ||||
| //////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> | ||||
| class Chebyshev : public OperatorFunction<Field> { | ||||
| private: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   std::vector<RealD> Coeffs; | ||||
|   int order; | ||||
|   RealD hi; | ||||
|   RealD lo; | ||||
|  | ||||
| public: | ||||
|   void csv(std::ostream &out){ | ||||
|     RealD diff = hi-lo; | ||||
|     RealD delta = diff*1.0e-9; | ||||
|     for (RealD x=lo; x<hi; x+=delta) { | ||||
|       delta*=1.02; | ||||
|       RealD f = approx(x); | ||||
|       out<< x<<" "<<f<<std::endl; | ||||
|     } | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   // Convenience for plotting the approximation | ||||
|   void   PlotApprox(std::ostream &out) { | ||||
|     out<<"Polynomial approx ["<<lo<<","<<hi<<"]"<<std::endl; | ||||
|     for(RealD x=lo;x<hi;x+=(hi-lo)/50.0){ | ||||
|       out <<x<<"\t"<<approx(x)<<std::endl; | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   Chebyshev(){}; | ||||
|   Chebyshev(ChebyParams p){ Init(p.alpha,p.beta,p.Npoly);}; | ||||
|   Chebyshev(RealD _lo,RealD _hi,int _order, RealD (* func)(RealD) ) {Init(_lo,_hi,_order,func);}; | ||||
|   Chebyshev(RealD _lo,RealD _hi,int _order) {Init(_lo,_hi,_order);}; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // c.f. numerical recipes "chebft"/"chebev". This is sec 5.8 "Chebyshev approximation". | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // CJ: the one we need for Lanczos | ||||
|   void Init(RealD _lo,RealD _hi,int _order) | ||||
|   { | ||||
|     lo=_lo; | ||||
|     hi=_hi; | ||||
|     order=_order; | ||||
|        | ||||
|     if(order < 2) exit(-1); | ||||
|     Coeffs.resize(order,0.0); | ||||
|     Coeffs[order-1] = 1.0; | ||||
|   }; | ||||
|    | ||||
|   // PB - more efficient low pass drops high modes above the low as 1/x uses all Chebyshev's. | ||||
|   // Similar kick effect below the threshold as Lanczos filter approach | ||||
|   void InitLowPass(RealD _lo,RealD _hi,int _order) | ||||
|   { | ||||
|     lo=_lo; | ||||
|     hi=_hi; | ||||
|     order=_order; | ||||
|        | ||||
|     if(order < 2) exit(-1); | ||||
|     Coeffs.resize(order); | ||||
|     for(int j=0;j<order;j++){ | ||||
|       RealD k=(order-1.0); | ||||
|       RealD s=std::cos( j*M_PI*(k+0.5)/order ); | ||||
|       Coeffs[j] = s * 2.0/order; | ||||
|     } | ||||
|      | ||||
|   }; | ||||
|  | ||||
|   void Init(RealD _lo,RealD _hi,int _order, RealD (* func)(RealD)) | ||||
|   { | ||||
|     lo=_lo; | ||||
|     hi=_hi; | ||||
|     order=_order; | ||||
|        | ||||
|     if(order < 2) exit(-1); | ||||
|     Coeffs.resize(order); | ||||
|     for(int j=0;j<order;j++){ | ||||
|       RealD s=0; | ||||
|       for(int k=0;k<order;k++){ | ||||
| 	RealD y=std::cos(M_PI*(k+0.5)/order); | ||||
| 	RealD x=0.5*(y*(hi-lo)+(hi+lo)); | ||||
| 	RealD f=func(x); | ||||
| 	s=s+f*std::cos( j*M_PI*(k+0.5)/order ); | ||||
|       } | ||||
|       Coeffs[j] = s * 2.0/order; | ||||
|     } | ||||
|   }; | ||||
|   template<class functor> | ||||
|   void Init(RealD _lo,RealD _hi,int _order, functor & func) | ||||
|   { | ||||
|     lo=_lo; | ||||
|     hi=_hi; | ||||
|     order=_order; | ||||
|        | ||||
|     if(order < 2) exit(-1); | ||||
|     Coeffs.resize(order); | ||||
|     for(int j=0;j<order;j++){ | ||||
|       RealD s=0; | ||||
|       for(int k=0;k<order;k++){ | ||||
| 	RealD y=std::cos(M_PI*(k+0.5)/order); | ||||
| 	RealD x=0.5*(y*(hi-lo)+(hi+lo)); | ||||
| 	RealD f=func(x); | ||||
| 	s=s+f*std::cos( j*M_PI*(k+0.5)/order ); | ||||
|       } | ||||
|       Coeffs[j] = s * 2.0/order; | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|      | ||||
|   void JacksonSmooth(void){ | ||||
|     RealD M=order; | ||||
|     RealD alpha = M_PI/(M+2); | ||||
|     RealD lmax = std::cos(alpha); | ||||
|     RealD sumUsq =0; | ||||
|     std::vector<RealD> U(M); | ||||
|     std::vector<RealD> a(M); | ||||
|     std::vector<RealD> g(M); | ||||
|     for(int n=0;n<=M;n++){ | ||||
|       U[n] = std::sin((n+1)*std::acos(lmax))/std::sin(std::acos(lmax)); | ||||
|       sumUsq += U[n]*U[n]; | ||||
|     }       | ||||
|     sumUsq = std::sqrt(sumUsq); | ||||
|  | ||||
|     for(int i=1;i<=M;i++){ | ||||
|       a[i] = U[i]/sumUsq; | ||||
|     } | ||||
|     g[0] = 1.0; | ||||
|     for(int m=1;m<=M;m++){ | ||||
|       g[m] = 0; | ||||
|       for(int i=0;i<=M-m;i++){ | ||||
| 	g[m]+= a[i]*a[m+i]; | ||||
|       } | ||||
|     } | ||||
|     for(int m=1;m<=M;m++){ | ||||
|       Coeffs[m]*=g[m]; | ||||
|     } | ||||
|   } | ||||
|   RealD approx(RealD x) // Convenience for plotting the approximation | ||||
|   { | ||||
|     RealD Tn; | ||||
|     RealD Tnm; | ||||
|     RealD Tnp; | ||||
|        | ||||
|     RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo)); | ||||
|        | ||||
|     RealD T0=1; | ||||
|     RealD T1=y; | ||||
|        | ||||
|     RealD sum; | ||||
|     sum = 0.5*Coeffs[0]*T0; | ||||
|     sum+= Coeffs[1]*T1; | ||||
|        | ||||
|     Tn =T1; | ||||
|     Tnm=T0; | ||||
|     for(int i=2;i<order;i++){ | ||||
|       Tnp=2*y*Tn-Tnm; | ||||
|       Tnm=Tn; | ||||
|       Tn =Tnp; | ||||
|       sum+= Tn*Coeffs[i]; | ||||
|     } | ||||
|     return sum; | ||||
|   }; | ||||
|  | ||||
|   RealD approxD(RealD x) | ||||
|   { | ||||
|     RealD Un; | ||||
|     RealD Unm; | ||||
|     RealD Unp; | ||||
|        | ||||
|     RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo)); | ||||
|        | ||||
|     RealD U0=1; | ||||
|     RealD U1=2*y; | ||||
|        | ||||
|     RealD sum; | ||||
|     sum = Coeffs[1]*U0; | ||||
|     sum+= Coeffs[2]*U1*2.0; | ||||
|        | ||||
|     Un =U1; | ||||
|     Unm=U0; | ||||
|     for(int i=2;i<order-1;i++){ | ||||
|       Unp=2*y*Un-Unm; | ||||
|       Unm=Un; | ||||
|       Un =Unp; | ||||
|       sum+= Un*Coeffs[i+1]*(i+1.0); | ||||
|     } | ||||
|     return sum/(0.5*(hi-lo)); | ||||
|   }; | ||||
|      | ||||
|   RealD approxInv(RealD z, RealD x0, int maxiter, RealD resid) { | ||||
|     RealD x = x0; | ||||
|     RealD eps; | ||||
|        | ||||
|     int i; | ||||
|     for (i=0;i<maxiter;i++) { | ||||
|       eps = approx(x) - z; | ||||
|       if (fabs(eps / z) < resid) | ||||
| 	return x; | ||||
|       x = x - eps / approxD(x); | ||||
|     } | ||||
|        | ||||
|     return std::numeric_limits<double>::quiet_NaN(); | ||||
|   } | ||||
|      | ||||
|   // Implement the required interface | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||
|  | ||||
|     GridBase *grid=in.Grid(); | ||||
|  | ||||
|     int vol=grid->gSites(); | ||||
|     typedef typename Field::vector_type vector_type; | ||||
|  | ||||
|     Field T0(grid); T0 = in;   | ||||
|     Field T1(grid);  | ||||
|     Field T2(grid); | ||||
|     Field y(grid); | ||||
|        | ||||
|     Field *Tnm = &T0; | ||||
|     Field *Tn  = &T1; | ||||
|     Field *Tnp = &T2; | ||||
|  | ||||
|     // Tn=T1 = (xscale M + mscale)in | ||||
|     RealD xscale = 2.0/(hi-lo); | ||||
|     RealD mscale = -(hi+lo)/(hi-lo); | ||||
|     Linop.HermOp(T0,y); | ||||
|     axpby(T1,xscale,mscale,y,in); | ||||
|  | ||||
|     // sum = .5 c[0] T0 + c[1] T1 | ||||
|     //    out = ()*T0 + Coeffs[1]*T1; | ||||
|     axpby(out,0.5*Coeffs[0],Coeffs[1],T0,T1); | ||||
|     for(int n=2;n<order;n++){ | ||||
|  | ||||
|       Linop.HermOp(*Tn,y); | ||||
|       axpby(y,xscale,mscale,y,(*Tn)); | ||||
|       axpby(*Tnp,2.0,-1.0,y,(*Tnm)); | ||||
|       if ( Coeffs[n] != 0.0) { | ||||
| 	axpy(out,Coeffs[n],*Tnp,out); | ||||
|       } | ||||
|  | ||||
|       // Cycle pointers to avoid copies | ||||
|       Field *swizzle = Tnm; | ||||
|       Tnm    =Tn; | ||||
|       Tn     =Tnp; | ||||
|       Tnp    =swizzle; | ||||
| 	   | ||||
|     } | ||||
|   } | ||||
| }; | ||||
|  | ||||
|  | ||||
| template<class Field> | ||||
| class ChebyshevLanczos : public Chebyshev<Field> { | ||||
| private: | ||||
|   std::vector<RealD> Coeffs; | ||||
|   int order; | ||||
|   RealD alpha; | ||||
|   RealD beta; | ||||
|   RealD mu; | ||||
|  | ||||
| public: | ||||
|   ChebyshevLanczos(RealD _alpha,RealD _beta,RealD _mu,int _order) : | ||||
|     alpha(_alpha), | ||||
|     beta(_beta), | ||||
|     mu(_mu) | ||||
|   { | ||||
|     order=_order; | ||||
|     Coeffs.resize(order); | ||||
|     for(int i=0;i<_order;i++){ | ||||
|       Coeffs[i] = 0.0; | ||||
|     } | ||||
|     Coeffs[order-1]=1.0; | ||||
|   }; | ||||
|  | ||||
|   void csv(std::ostream &out){ | ||||
|     for (RealD x=-1.2*alpha; x<1.2*alpha; x+=(2.0*alpha)/10000) { | ||||
|       RealD f = approx(x); | ||||
|       out<< x<<" "<<f<<std::endl; | ||||
|     } | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   RealD approx(RealD xx) // Convenience for plotting the approximation | ||||
|   { | ||||
|     RealD Tn; | ||||
|     RealD Tnm; | ||||
|     RealD Tnp; | ||||
|     Real aa = alpha * alpha; | ||||
|     Real bb = beta  *  beta; | ||||
|        | ||||
|     RealD x = ( 2.0 * (xx-mu)*(xx-mu) - (aa+bb) ) / (aa-bb); | ||||
|  | ||||
|     RealD y= x; | ||||
|        | ||||
|     RealD T0=1; | ||||
|     RealD T1=y; | ||||
|        | ||||
|     RealD sum; | ||||
|     sum = 0.5*Coeffs[0]*T0; | ||||
|     sum+= Coeffs[1]*T1; | ||||
|        | ||||
|     Tn =T1; | ||||
|     Tnm=T0; | ||||
|     for(int i=2;i<order;i++){ | ||||
|       Tnp=2*y*Tn-Tnm; | ||||
|       Tnm=Tn; | ||||
|       Tn =Tnp; | ||||
|       sum+= Tn*Coeffs[i]; | ||||
|     } | ||||
|     return sum; | ||||
|   }; | ||||
|  | ||||
|   // shift_Multiply in Rudy's code | ||||
|   void AminusMuSq(LinearOperatorBase<Field> &Linop, const Field &in, Field &out)  | ||||
|   { | ||||
|     GridBase *grid=in.Grid(); | ||||
|     Field tmp(grid); | ||||
|  | ||||
|     RealD aa= alpha*alpha; | ||||
|     RealD bb= beta * beta; | ||||
|  | ||||
|     Linop.HermOp(in,out); | ||||
|     out = out - mu*in; | ||||
|  | ||||
|     Linop.HermOp(out,tmp); | ||||
|     tmp = tmp - mu * out; | ||||
|  | ||||
|     out = (2.0/ (aa-bb) ) * tmp -  ((aa+bb)/(aa-bb))*in; | ||||
|   }; | ||||
|   // Implement the required interface | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||
|  | ||||
|     GridBase *grid=in.Grid(); | ||||
|  | ||||
|     int vol=grid->gSites(); | ||||
|  | ||||
|     Field T0(grid); T0 = in;   | ||||
|     Field T1(grid);  | ||||
|     Field T2(grid); | ||||
|     Field  y(grid); | ||||
|        | ||||
|     Field *Tnm = &T0; | ||||
|     Field *Tn  = &T1; | ||||
|     Field *Tnp = &T2; | ||||
|  | ||||
|     // Tn=T1 = (xscale M )*in | ||||
|     AminusMuSq(Linop,T0,T1); | ||||
|  | ||||
|     // sum = .5 c[0] T0 + c[1] T1 | ||||
|     out = (0.5*Coeffs[0])*T0 + Coeffs[1]*T1; | ||||
|     for(int n=2;n<order;n++){ | ||||
| 	 | ||||
|       AminusMuSq(Linop,*Tn,y); | ||||
|  | ||||
|       *Tnp=2.0*y-(*Tnm); | ||||
|  | ||||
|       out=out+Coeffs[n]* (*Tnp); | ||||
|  | ||||
|       // Cycle pointers to avoid copies | ||||
|       Field *swizzle = Tnm; | ||||
|       Tnm    =Tn; | ||||
|       Tn     =Tnp; | ||||
|       Tnp    =swizzle; | ||||
| 	   | ||||
|     } | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										152
									
								
								Grid/algorithms/approx/Forecast.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										152
									
								
								Grid/algorithms/approx/Forecast.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,152 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/approx/Forecast.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: David Murphy <dmurphy@phys.columbia.edu> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| 			   /*  END LEGAL */ | ||||
|  | ||||
| #ifndef INCLUDED_FORECAST_H | ||||
| #define INCLUDED_FORECAST_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Abstract base class. | ||||
| // Takes a matrix (Mat), a source (phi), and a vector of Fields (chi) | ||||
| // and returns a forecasted solution to the system D*psi = phi (psi). | ||||
| template<class Matrix, class Field> | ||||
| class Forecast | ||||
| { | ||||
| public: | ||||
|   virtual Field operator()(Matrix &Mat, const Field& phi, const std::vector<Field>& chi) = 0; | ||||
| }; | ||||
|  | ||||
| // Implementation of Brower et al.'s chronological inverter (arXiv:hep-lat/9509012), | ||||
| // used to forecast solutions across poles of the EOFA heatbath. | ||||
| // | ||||
| // Modified from CPS (cps_pp/src/util/dirac_op/d_op_base/comsrc/minresext.C) | ||||
| template<class Matrix, class Field> | ||||
| class ChronoForecast : public Forecast<Matrix,Field> | ||||
| { | ||||
| public: | ||||
|   Field operator()(Matrix &Mat, const Field& phi, const std::vector<Field>& prev_solns) | ||||
|   { | ||||
|     int degree = prev_solns.size(); | ||||
|     Field chi(phi); // forecasted solution | ||||
|  | ||||
|     // Trivial cases | ||||
|     if(degree == 0){ chi = Zero(); return chi; } | ||||
|     else if(degree == 1){ return prev_solns[0]; } | ||||
|  | ||||
|     //    RealD dot; | ||||
|     ComplexD xp; | ||||
|     Field r(phi); // residual | ||||
|     Field Mv(phi); | ||||
|     std::vector<Field> v(prev_solns); // orthonormalized previous solutions | ||||
|     std::vector<Field> MdagMv(degree,phi); | ||||
|  | ||||
|     // Array to hold the matrix elements | ||||
|     std::vector<std::vector<ComplexD>> G(degree, std::vector<ComplexD>(degree)); | ||||
|  | ||||
|     // Solution and source vectors | ||||
|     std::vector<ComplexD> a(degree); | ||||
|     std::vector<ComplexD> b(degree); | ||||
|  | ||||
|     // Orthonormalize the vector basis | ||||
|     for(int i=0; i<degree; i++){ | ||||
|       v[i] *= 1.0/std::sqrt(norm2(v[i])); | ||||
|       for(int j=i+1; j<degree; j++){ v[j] -= innerProduct(v[i],v[j]) * v[i]; } | ||||
|     } | ||||
|  | ||||
|     // Perform sparse matrix multiplication and construct rhs | ||||
|     for(int i=0; i<degree; i++){ | ||||
|       b[i] = innerProduct(v[i],phi); | ||||
|       Mat.M(v[i],Mv); | ||||
|       Mat.Mdag(Mv,MdagMv[i]); | ||||
|       G[i][i] = innerProduct(v[i],MdagMv[i]); | ||||
|     } | ||||
|  | ||||
|     // Construct the matrix | ||||
|     for(int j=0; j<degree; j++){ | ||||
|       for(int k=j+1; k<degree; k++){ | ||||
| 	G[j][k] = innerProduct(v[j],MdagMv[k]); | ||||
| 	G[k][j] = conjugate(G[j][k]); | ||||
|       }} | ||||
|  | ||||
|     // Gauss-Jordan elimination with partial pivoting | ||||
|     for(int i=0; i<degree; i++){ | ||||
|  | ||||
|       // Perform partial pivoting | ||||
|       int k = i; | ||||
|       for(int j=i+1; j<degree; j++){ if(abs(G[j][j]) > abs(G[k][k])){ k = j; } } | ||||
|       if(k != i){ | ||||
| 	xp = b[k]; | ||||
| 	b[k] = b[i]; | ||||
| 	b[i] = xp; | ||||
| 	for(int j=0; j<degree; j++){ | ||||
| 	  xp = G[k][j]; | ||||
| 	  G[k][j] = G[i][j]; | ||||
| 	  G[i][j] = xp; | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       // Convert matrix to upper triangular form | ||||
|       for(int j=i+1; j<degree; j++){ | ||||
| 	xp = G[j][i]/G[i][i]; | ||||
| 	b[j] -= xp * b[i]; | ||||
| 	for(int k=0; k<degree; k++){ G[j][k] -= xp*G[i][k]; } | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     // Use Gaussian elimination to solve equations and calculate initial guess | ||||
|     chi = Zero(); | ||||
|     r = phi; | ||||
|     for(int i=degree-1; i>=0; i--){ | ||||
|       a[i] = 0.0; | ||||
|       for(int j=i+1; j<degree; j++){ a[i] += G[i][j] * a[j]; } | ||||
|       a[i] = (b[i]-a[i])/G[i][i]; | ||||
|       chi += a[i]*v[i]; | ||||
|       r -= a[i]*MdagMv[i]; | ||||
|     } | ||||
|  | ||||
|     RealD true_r(0.0); | ||||
|     ComplexD tmp; | ||||
|     for(int i=0; i<degree; i++){ | ||||
|       tmp = -b[i]; | ||||
|       for(int j=0; j<degree; j++){ tmp += G[i][j]*a[j]; } | ||||
|       tmp = conjugate(tmp)*tmp; | ||||
|       true_r += std::sqrt(tmp.real()); | ||||
|     } | ||||
|  | ||||
|     RealD error = std::sqrt(norm2(r)/norm2(phi)); | ||||
|     std::cout << GridLogMessage << "ChronoForecast: |res|/|src| = " << error << std::endl; | ||||
|  | ||||
|     return chi; | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										129
									
								
								Grid/algorithms/approx/JacobiPolynomial.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										129
									
								
								Grid/algorithms/approx/JacobiPolynomial.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,129 @@ | ||||
| #ifndef GRID_JACOBIPOLYNOMIAL_H | ||||
| #define GRID_JACOBIPOLYNOMIAL_H | ||||
|  | ||||
| #include <Grid/algorithms/LinearOperator.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Field> | ||||
| class JacobiPolynomial : public OperatorFunction<Field> { | ||||
|  private: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   int order; | ||||
|   RealD hi; | ||||
|   RealD lo; | ||||
|   RealD alpha; | ||||
|   RealD beta; | ||||
|  | ||||
|  public: | ||||
|   void csv(std::ostream &out){ | ||||
|     csv(out,lo,hi); | ||||
|   } | ||||
|   void csv(std::ostream &out,RealD llo,RealD hhi){ | ||||
|     RealD diff = hhi-llo; | ||||
|     RealD delta = diff*1.0e-5; | ||||
|     for (RealD x=llo-delta; x<=hhi; x+=delta) { | ||||
|       RealD f = approx(x); | ||||
|       out<< x<<" "<<f <<std::endl; | ||||
|     } | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   JacobiPolynomial(){}; | ||||
|   JacobiPolynomial(RealD _lo,RealD _hi,int _order,RealD _alpha, RealD _beta) | ||||
|   { | ||||
|       lo=_lo; | ||||
|       hi=_hi; | ||||
|       alpha=_alpha; | ||||
|       beta=_beta; | ||||
|       order=_order; | ||||
|   }; | ||||
|  | ||||
|   RealD approx(RealD x) // Convenience for plotting the approximation                                                        | ||||
|   { | ||||
|     RealD Tn; | ||||
|     RealD Tnm; | ||||
|     RealD Tnp; | ||||
|  | ||||
|     RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo)); | ||||
|  | ||||
|     RealD T0=1.0; | ||||
|     RealD T1=(alpha-beta)*0.5+(alpha+beta+2.0)*0.5*y; | ||||
|  | ||||
|     Tn =T1; | ||||
|     Tnm=T0; | ||||
|     for(int n=2;n<=order;n++){ | ||||
|       RealD cnp = 2.0*n*(n+alpha+beta)*(2.0*n-2.0+alpha+beta); | ||||
|       RealD cny = (2.0*n-2.0+alpha+beta)*(2.0*n-1.0+alpha+beta)*(2.0*n+alpha+beta); | ||||
|       RealD cn1 = (2.0*n+alpha+beta-1.0)*(alpha*alpha-beta*beta); | ||||
|       RealD cnm = - 2.0*(n+alpha-1.0)*(n+beta-1.0)*(2.0*n+alpha+beta); | ||||
|       Tnp= ( cny * y *Tn + cn1 * Tn + cnm * Tnm )/ cnp; | ||||
|       Tnm=Tn; | ||||
|       Tn =Tnp; | ||||
|     } | ||||
|     return Tnp; | ||||
|   }; | ||||
|  | ||||
|   // Implement the required interface                                                                                        | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &in, Field &out) { | ||||
|     GridBase *grid=in.Grid(); | ||||
|  | ||||
|     int vol=grid->gSites(); | ||||
|  | ||||
|     Field T0(grid); | ||||
|     Field T1(grid); | ||||
|     Field T2(grid); | ||||
|     Field y(grid); | ||||
|  | ||||
|  | ||||
|     Field *Tnm = &T0; | ||||
|     Field *Tn  = &T1; | ||||
|     Field *Tnp = &T2; | ||||
|  | ||||
|     //    RealD T0=1.0;                                                                                                      | ||||
|     T0=in; | ||||
|  | ||||
|     //    RealD y=( x-0.5*(hi+lo))/(0.5*(hi-lo));                                                                            | ||||
|     //           = x * 2/(hi-lo) - (hi+lo)/(hi-lo)                                                                           | ||||
|     Linop.HermOp(T0,y); | ||||
|     RealD xscale = 2.0/(hi-lo); | ||||
|     RealD mscale = -(hi+lo)/(hi-lo); | ||||
|     Linop.HermOp(T0,y); | ||||
|     y=y*xscale+in*mscale; | ||||
|  | ||||
|     // RealD T1=(alpha-beta)*0.5+(alpha+beta+2.0)*0.5*y; | ||||
|     RealD halfAmB  = (alpha-beta)*0.5; | ||||
|     RealD halfApBp2= (alpha+beta+2.0)*0.5; | ||||
|     T1 = halfAmB * in + halfApBp2*y; | ||||
|  | ||||
|     for(int n=2;n<=order;n++){ | ||||
|  | ||||
|       Linop.HermOp(*Tn,y); | ||||
|       y=xscale*y+mscale*(*Tn); | ||||
|  | ||||
|       RealD cnp = 2.0*n*(n+alpha+beta)*(2.0*n-2.0+alpha+beta); | ||||
|       RealD cny = (2.0*n-2.0+alpha+beta)*(2.0*n-1.0+alpha+beta)*(2.0*n+alpha+beta); | ||||
|       RealD cn1 = (2.0*n+alpha+beta-1.0)*(alpha*alpha-beta*beta); | ||||
|       RealD cnm = - 2.0*(n+alpha-1.0)*(n+beta-1.0)*(2.0*n+alpha+beta); | ||||
|  | ||||
|       //      Tnp= ( cny * y *Tn + cn1 * Tn + cnm * Tnm )/ cnp;                                                              | ||||
|       cny=cny/cnp; | ||||
|       cn1=cn1/cnp; | ||||
|       cn1=cn1/cnp; | ||||
|       cnm=cnm/cnp; | ||||
|  | ||||
|       *Tnp=cny*y + cn1 *(*Tn) + cnm * (*Tnm); | ||||
|  | ||||
|       // Cycle pointers to avoid copies                                                                                      | ||||
|       Field *swizzle = Tnm; | ||||
|       Tnm    =Tn; | ||||
|       Tn     =Tnp; | ||||
|       Tnp    =swizzle; | ||||
|     } | ||||
|     out=*Tnp; | ||||
|  | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -27,7 +27,8 @@ Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
|     /*  END LEGAL */ | ||||
| #include <Grid/GridCore.h> | ||||
| 
 | ||||
| namespace Grid { | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| double MultiShiftFunction::approx(double x) | ||||
| { | ||||
|   double a = norm; | ||||
| @@ -53,4 +54,4 @@ void MultiShiftFunction::csv(std::ostream &out) | ||||
|   } | ||||
|   return; | ||||
| } | ||||
| } | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -29,7 +29,7 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| #ifndef MULTI_SHIFT_FUNCTION | ||||
| #define MULTI_SHIFT_FUNCTION | ||||
| 
 | ||||
| namespace Grid { | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| class MultiShiftFunction { | ||||
| public: | ||||
| @@ -40,7 +40,7 @@ public: | ||||
|   RealD norm; | ||||
|   RealD lo,hi; | ||||
| 
 | ||||
|   MultiShiftFunction(int n,RealD _lo,RealD _hi): poles(n), residues(n), lo(_lo), hi(_hi) {;}; | ||||
|   MultiShiftFunction(int n,RealD _lo,RealD _hi): poles(n), residues(n), tolerances(n), lo(_lo), hi(_hi) {;}; | ||||
|   RealD approx(RealD x); | ||||
|   void csv(std::ostream &out); | ||||
|   void gnuplot(std::ostream &out); | ||||
| @@ -63,5 +63,5 @@ public: | ||||
|   } | ||||
| 
 | ||||
| }; | ||||
| } | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -298,7 +298,7 @@ void AlgRemez::stpini(bigfloat *step) { | ||||
| // Search for error maxima and minima
 | ||||
| void AlgRemez::search(bigfloat *step) { | ||||
|   bigfloat a, q, xm, ym, xn, yn, xx0, xx1; | ||||
|   int i, j, meq, emsign, ensign, steps; | ||||
|   int i, meq, emsign, ensign, steps; | ||||
| 
 | ||||
|   meq = neq + 1; | ||||
|   bigfloat *yy = new bigfloat[meq]; | ||||
| @@ -306,7 +306,6 @@ void AlgRemez::search(bigfloat *step) { | ||||
|   bigfloat eclose = 1.0e30; | ||||
|   bigfloat farther = 0l; | ||||
| 
 | ||||
|   j = 1; | ||||
|   xx0 = apstrt; | ||||
| 
 | ||||
|   for (i = 0; i < meq; i++) { | ||||
							
								
								
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										473
									
								
								Grid/algorithms/approx/RemezGeneral.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,473 @@ | ||||
| #include<math.h> | ||||
| #include<stdio.h> | ||||
| #include<stdlib.h> | ||||
| #include<string> | ||||
| #include<iostream> | ||||
| #include<iomanip> | ||||
| #include<cassert> | ||||
|  | ||||
| #include<Grid/algorithms/approx/RemezGeneral.h> | ||||
|  | ||||
|  | ||||
| // Constructor | ||||
| AlgRemezGeneral::AlgRemezGeneral(double lower, double upper, long precision, | ||||
| 				 bigfloat (*f)(bigfloat x, void *data), void *data): f(f),  | ||||
| 										     data(data),  | ||||
| 										     prec(precision), | ||||
| 										     apstrt(lower), apend(upper), apwidt(upper - lower), | ||||
| 										     n(0), d(0), pow_n(0), pow_d(0) | ||||
| { | ||||
|   bigfloat::setDefaultPrecision(prec); | ||||
|  | ||||
|   std::cout<<"Approximation bounds are ["<<apstrt<<","<<apend<<"]\n"; | ||||
|   std::cout<<"Precision of arithmetic is "<<precision<<std::endl; | ||||
| } | ||||
|  | ||||
| //Determine the properties of the numerator and denominator polynomials | ||||
| void AlgRemezGeneral::setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in){ | ||||
|   pow_n = num_degree; | ||||
|   pow_d = den_degree; | ||||
|  | ||||
|   if(pow_n % 2 == 0 && num_type_in == PolyType::Odd) assert(0); | ||||
|   if(pow_n % 2 == 1 && num_type_in == PolyType::Even) assert(0); | ||||
|  | ||||
|   if(pow_d % 2 == 0 && den_type_in == PolyType::Odd) assert(0); | ||||
|   if(pow_d % 2 == 1 && den_type_in == PolyType::Even) assert(0); | ||||
|  | ||||
|   num_type = num_type_in; | ||||
|   den_type = den_type_in; | ||||
|  | ||||
|   num_pows.resize(pow_n+1); | ||||
|   den_pows.resize(pow_d+1); | ||||
|  | ||||
|   int n_in = 0; | ||||
|   bool odd = num_type == PolyType::Full || num_type == PolyType::Odd; | ||||
|   bool even = num_type == PolyType::Full || num_type == PolyType::Even; | ||||
|   for(int i=0;i<=pow_n;i++){ | ||||
|     num_pows[i] = -1; | ||||
|     if(i % 2 == 0 && even) num_pows[i] = n_in++; | ||||
|     if(i % 2 == 1 && odd) num_pows[i] = n_in++; | ||||
|   } | ||||
|  | ||||
|   std::cout << n_in << " terms in numerator" << std::endl; | ||||
|   --n_in; //power is 1 less than the number of terms, eg  pow=1   a x^1  + b x^0 | ||||
|  | ||||
|   int d_in = 0; | ||||
|   odd = den_type == PolyType::Full || den_type == PolyType::Odd; | ||||
|   even = den_type == PolyType::Full || den_type == PolyType::Even; | ||||
|   for(int i=0;i<=pow_d;i++){ | ||||
|     den_pows[i] = -1; | ||||
|     if(i % 2 == 0 && even) den_pows[i] = d_in++; | ||||
|     if(i % 2 == 1 && odd) den_pows[i] = d_in++; | ||||
|   } | ||||
|  | ||||
|   std::cout << d_in << " terms in denominator" << std::endl; | ||||
|   --d_in; | ||||
|  | ||||
|   n = n_in; | ||||
|   d = d_in; | ||||
| } | ||||
|  | ||||
| //Setup algorithm | ||||
| void AlgRemezGeneral::reinitializeAlgorithm(){ | ||||
|   spread = 1.0e37; | ||||
|   iter = 0; | ||||
|  | ||||
|   neq = n + d + 1; //not +2 because highest-power term in denominator is fixed to 1 | ||||
|  | ||||
|   param.resize(neq); | ||||
|   yy.resize(neq+1); | ||||
|  | ||||
|   //Initialize linear equation temporaries | ||||
|   A.resize(neq*neq); | ||||
|   B.resize(neq); | ||||
|   IPS.resize(neq); | ||||
|  | ||||
|   //Initialize maximum and minimum errors | ||||
|   xx.resize(neq+2); | ||||
|   mm.resize(neq+1); | ||||
|   initialGuess(); | ||||
|  | ||||
|   //Initialize search steps | ||||
|   step.resize(neq+1); | ||||
|   stpini(); | ||||
| } | ||||
|  | ||||
| double AlgRemezGeneral::generateApprox(const int num_degree, const int den_degree,  | ||||
| 				       const PolyType num_type_in, const PolyType den_type_in,  | ||||
| 				       const double _tolerance, const int report_freq){ | ||||
|   //Setup the properties of the polynomial | ||||
|   setupPolyProperties(num_degree, den_degree, num_type_in, den_type_in); | ||||
|  | ||||
|   //Setup the algorithm | ||||
|   reinitializeAlgorithm(); | ||||
|  | ||||
|   bigfloat tolerance = _tolerance; | ||||
|  | ||||
|   //Iterate until convergance | ||||
|   while (spread > tolerance) {  | ||||
|     if (iter++ % report_freq==0) | ||||
|       std::cout<<"Iteration " <<iter-1<<" spread "<<(double)spread<<" delta "<<(double)delta << std::endl;  | ||||
|  | ||||
|     equations(); | ||||
|     if (delta < tolerance) { | ||||
|       std::cout<<"Iteration " << iter-1 << " delta too small (" << delta << "<" << tolerance << "), try increasing precision\n"; | ||||
|       assert(0); | ||||
|     };     | ||||
|     assert( delta>= tolerance ); | ||||
|  | ||||
|     search(); | ||||
|   } | ||||
|  | ||||
|   int sign; | ||||
|   double error = (double)getErr(mm[0],&sign); | ||||
|   std::cout<<"Converged at "<<iter<<" iterations; error = "<<error<<std::endl; | ||||
|  | ||||
|   // Return the maximum error in the approximation | ||||
|   return error; | ||||
| } | ||||
|  | ||||
|  | ||||
| // Initial values of maximal and minimal errors | ||||
| void AlgRemezGeneral::initialGuess(){ | ||||
|   // Supply initial guesses for solution points | ||||
|   long ncheb = neq;			// Degree of Chebyshev error estimate | ||||
|  | ||||
|   // Find ncheb+1 extrema of Chebyshev polynomial | ||||
|   bigfloat a = ncheb; | ||||
|   bigfloat r; | ||||
|  | ||||
|   mm[0] = apstrt; | ||||
|   for (long i = 1; i < ncheb; i++) { | ||||
|     r = 0.5 * (1 - cos((M_PI * i)/(double) a)); | ||||
|     //r *= sqrt_bf(r); | ||||
|     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||
|     mm[i] = apstrt + r * apwidt; | ||||
|   } | ||||
|   mm[ncheb] = apend; | ||||
|  | ||||
|   a = 2.0 * ncheb; | ||||
|   for (long i = 0; i <= ncheb; i++) { | ||||
|     r = 0.5 * (1 - cos(M_PI * (2*i+1)/(double) a)); | ||||
|     //r *= sqrt_bf(r); // Squeeze to low end of interval | ||||
|     r = (exp((double)r)-1.0)/(exp(1.0)-1.0); | ||||
|     xx[i] = apstrt + r * apwidt; | ||||
|   } | ||||
| } | ||||
|  | ||||
| // Initialise step sizes | ||||
| void AlgRemezGeneral::stpini(){ | ||||
|   xx[neq+1] = apend; | ||||
|   delta = 0.25; | ||||
|   step[0] = xx[0] - apstrt; | ||||
|   for (int i = 1; i < neq; i++) step[i] = xx[i] - xx[i-1]; | ||||
|   step[neq] = step[neq-1]; | ||||
| } | ||||
|  | ||||
| // Search for error maxima and minima | ||||
| void AlgRemezGeneral::search(){ | ||||
|   bigfloat a, q, xm, ym, xn, yn, xx1; | ||||
|   int emsign, ensign, steps; | ||||
|  | ||||
|   int meq = neq + 1; | ||||
|  | ||||
|   bigfloat eclose = 1.0e30; | ||||
|   bigfloat farther = 0l; | ||||
|  | ||||
|   bigfloat xx0 = apstrt; | ||||
|  | ||||
|   for (int i = 0; i < meq; i++) { | ||||
|     steps = 0; | ||||
|     xx1 = xx[i]; // Next zero | ||||
|     if (i == meq-1) xx1 = apend; | ||||
|     xm = mm[i]; | ||||
|     ym = getErr(xm,&emsign); | ||||
|     q = step[i]; | ||||
|     xn = xm + q; | ||||
|     if (xn < xx0 || xn >= xx1) {	// Cannot skip over adjacent boundaries | ||||
|       q = -q; | ||||
|       xn = xm; | ||||
|       yn = ym; | ||||
|       ensign = emsign; | ||||
|     } else { | ||||
|       yn = getErr(xn,&ensign); | ||||
|       if (yn < ym) { | ||||
| 	q = -q; | ||||
| 	xn = xm; | ||||
| 	yn = ym; | ||||
| 	ensign = emsign; | ||||
|       } | ||||
|     } | ||||
|    | ||||
|     while(yn >= ym) {		// March until error becomes smaller. | ||||
|       if (++steps > 10) | ||||
|       	break; | ||||
|        | ||||
|       ym = yn; | ||||
|       xm = xn; | ||||
|       emsign = ensign; | ||||
|       a = xm + q; | ||||
|       if (a == xm || a <= xx0 || a >= xx1) | ||||
| 	break;// Must not skip over the zeros either side.       | ||||
|  | ||||
|       xn = a; | ||||
|       yn = getErr(xn,&ensign); | ||||
|     } | ||||
|  | ||||
|     mm[i] = xm;			// Position of maximum | ||||
|     yy[i] = ym;			// Value of maximum | ||||
|  | ||||
|     if (eclose > ym) eclose = ym; | ||||
|     if (farther < ym) farther = ym; | ||||
|  | ||||
|     xx0 = xx1; // Walk to next zero. | ||||
|   } // end of search loop | ||||
|  | ||||
|   q = (farther - eclose);	// Decrease step size if error spread increased | ||||
|  | ||||
|   if (eclose != 0.0) q /= eclose; // Relative error spread | ||||
|  | ||||
|   if (q >= spread) | ||||
|     delta *= 0.5; // Spread is increasing; decrease step size | ||||
|    | ||||
|   spread = q; | ||||
|  | ||||
|   for (int i = 0; i < neq; i++) { | ||||
|     q = yy[i+1]; | ||||
|     if (q != 0.0) q = yy[i] / q  - (bigfloat)1l; | ||||
|     else q = 0.0625; | ||||
|     if (q > (bigfloat)0.25) q = 0.25; | ||||
|     q *= mm[i+1] - mm[i]; | ||||
|     step[i] = q * delta; | ||||
|   } | ||||
|   step[neq] = step[neq-1]; | ||||
|    | ||||
|   for (int i = 0; i < neq; i++) {	// Insert new locations for the zeros. | ||||
|     xm = xx[i] - step[i]; | ||||
|  | ||||
|     if (xm <= apstrt) | ||||
|       continue; | ||||
|  | ||||
|     if (xm >= apend) | ||||
|       continue; | ||||
|  | ||||
|     if (xm <= mm[i]) | ||||
|       xm = (bigfloat)0.5 * (mm[i] + xx[i]);     | ||||
|  | ||||
|     if (xm >= mm[i+1]) | ||||
|       xm = (bigfloat)0.5 * (mm[i+1] + xx[i]); | ||||
|      | ||||
|     xx[i] = xm; | ||||
|   } | ||||
| } | ||||
|  | ||||
| // Solve the equations | ||||
| void AlgRemezGeneral::equations(){ | ||||
|   bigfloat x, y, z; | ||||
|   bigfloat *aa; | ||||
|    | ||||
|   for (int i = 0; i < neq; i++) {	// set up the equations for solution by simq() | ||||
|     int ip = neq * i;		// offset to 1st element of this row of matrix | ||||
|     x = xx[i];			// the guess for this row | ||||
|     y = func(x);		// right-hand-side vector | ||||
|  | ||||
|     z = (bigfloat)1l; | ||||
|     aa = A.data()+ip; | ||||
|     int t = 0; | ||||
|     for (int j = 0; j <= pow_n; j++) { | ||||
|       if(num_pows[j] != -1){ *aa++ = z; t++; } | ||||
|       z *= x; | ||||
|     } | ||||
|     assert(t == n+1); | ||||
|  | ||||
|     z = (bigfloat)1l; | ||||
|     t = 0; | ||||
|     for (int j = 0; j < pow_d; j++) { | ||||
|       if(den_pows[j] != -1){ *aa++ = -y * z; t++; } | ||||
|       z *= x; | ||||
|     } | ||||
|     assert(t == d); | ||||
|  | ||||
|     B[i] = y * z;		// Right hand side vector | ||||
|   } | ||||
|  | ||||
|   // Solve the simultaneous linear equations. | ||||
|   if (simq()){ | ||||
|     std::cout<<"simq failed\n"; | ||||
|     exit(0); | ||||
|   } | ||||
| } | ||||
|  | ||||
|  | ||||
| // Evaluate the rational form P(x)/Q(x) using coefficients | ||||
| // from the solution vector param | ||||
| bigfloat AlgRemezGeneral::approx(const bigfloat x) const{ | ||||
|   // Work backwards toward the constant term. | ||||
|   int c = n; | ||||
|   bigfloat yn = param[c--];		// Highest order numerator coefficient | ||||
|   for (int i = pow_n-1; i >= 0; i--) yn = x * yn  +  (num_pows[i] != -1 ? param[c--] : bigfloat(0l));   | ||||
|  | ||||
|   c = n+d; | ||||
|   bigfloat yd = 1l; //Highest degree coefficient is 1.0 | ||||
|   for (int i = pow_d-1; i >= 0; i--) yd = x * yd  +  (den_pows[i] != -1 ? param[c--] : bigfloat(0l));  | ||||
|  | ||||
|   return(yn/yd); | ||||
| } | ||||
|  | ||||
| // Compute size and sign of the approximation error at x | ||||
| bigfloat AlgRemezGeneral::getErr(bigfloat x, int *sign) const{ | ||||
|   bigfloat f = func(x); | ||||
|   bigfloat e = approx(x) - f; | ||||
|   if (f != 0) e /= f; | ||||
|   if (e < (bigfloat)0.0) { | ||||
|     *sign = -1; | ||||
|     e = -e; | ||||
|   } | ||||
|   else *sign = 1; | ||||
|    | ||||
|   return(e); | ||||
| } | ||||
|  | ||||
| // Solve the system AX=B | ||||
| int AlgRemezGeneral::simq(){ | ||||
|  | ||||
|   int ip, ipj, ipk, ipn; | ||||
|   int idxpiv; | ||||
|   int kp, kp1, kpk, kpn; | ||||
|   int nip, nkp; | ||||
|   bigfloat em, q, rownrm, big, size, pivot, sum; | ||||
|   bigfloat *aa; | ||||
|   bigfloat *X = param.data(); | ||||
|  | ||||
|   int n = neq; | ||||
|   int nm1 = n - 1; | ||||
|   // Initialize IPS and X | ||||
|    | ||||
|   int ij = 0; | ||||
|   for (int i = 0; i < n; i++) { | ||||
|     IPS[i] = i; | ||||
|     rownrm = 0.0; | ||||
|     for(int j = 0; j < n; j++) { | ||||
|       q = abs_bf(A[ij]); | ||||
|       if(rownrm < q) rownrm = q; | ||||
|       ++ij; | ||||
|     } | ||||
|     if (rownrm == (bigfloat)0l) { | ||||
|       std::cout<<"simq rownrm=0\n"; | ||||
|       return(1); | ||||
|     } | ||||
|     X[i] = (bigfloat)1.0 / rownrm; | ||||
|   } | ||||
|    | ||||
|   for (int k = 0; k < nm1; k++) { | ||||
|     big = 0.0; | ||||
|     idxpiv = 0; | ||||
|      | ||||
|     for (int i = k; i < n; i++) { | ||||
|       ip = IPS[i]; | ||||
|       ipk = n*ip + k; | ||||
|       size = abs_bf(A[ipk]) * X[ip]; | ||||
|       if (size > big) { | ||||
| 	big = size; | ||||
| 	idxpiv = i; | ||||
|       } | ||||
|     } | ||||
|      | ||||
|     if (big == (bigfloat)0l) { | ||||
|       std::cout<<"simq big=0\n"; | ||||
|       return(2); | ||||
|     } | ||||
|     if (idxpiv != k) { | ||||
|       int j = IPS[k]; | ||||
|       IPS[k] = IPS[idxpiv]; | ||||
|       IPS[idxpiv] = j; | ||||
|     } | ||||
|     kp = IPS[k]; | ||||
|     kpk = n*kp + k; | ||||
|     pivot = A[kpk]; | ||||
|     kp1 = k+1; | ||||
|     for (int i = kp1; i < n; i++) { | ||||
|       ip = IPS[i]; | ||||
|       ipk = n*ip + k; | ||||
|       em = -A[ipk] / pivot; | ||||
|       A[ipk] = -em; | ||||
|       nip = n*ip; | ||||
|       nkp = n*kp; | ||||
|       aa = A.data()+nkp+kp1; | ||||
|       for (int j = kp1; j < n; j++) { | ||||
| 	ipj = nip + j; | ||||
| 	A[ipj] = A[ipj] + em * *aa++; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   kpn = n * IPS[n-1] + n - 1;	// last element of IPS[n] th row | ||||
|   if (A[kpn] == (bigfloat)0l) { | ||||
|     std::cout<<"simq A[kpn]=0\n"; | ||||
|     return(3); | ||||
|   } | ||||
|  | ||||
|    | ||||
|   ip = IPS[0]; | ||||
|   X[0] = B[ip]; | ||||
|   for (int i = 1; i < n; i++) { | ||||
|     ip = IPS[i]; | ||||
|     ipj = n * ip; | ||||
|     sum = 0.0; | ||||
|     for (int j = 0; j < i; j++) { | ||||
|       sum += A[ipj] * X[j]; | ||||
|       ++ipj; | ||||
|     } | ||||
|     X[i] = B[ip] - sum; | ||||
|   } | ||||
|    | ||||
|   ipn = n * IPS[n-1] + n - 1; | ||||
|   X[n-1] = X[n-1] / A[ipn]; | ||||
|    | ||||
|   for (int iback = 1; iback < n; iback++) { | ||||
|     //i goes (n-1),...,1 | ||||
|     int i = nm1 - iback; | ||||
|     ip = IPS[i]; | ||||
|     nip = n*ip; | ||||
|     sum = 0.0; | ||||
|     aa = A.data()+nip+i+1; | ||||
|     for (int j= i + 1; j < n; j++)  | ||||
|       sum += *aa++ * X[j]; | ||||
|     X[i] = (X[i] - sum) / A[nip+i]; | ||||
|   } | ||||
|    | ||||
|   return(0); | ||||
| } | ||||
|  | ||||
| void AlgRemezGeneral::csv(std::ostream & os) const{ | ||||
|   os << "Numerator" << std::endl; | ||||
|   for(int i=0;i<=pow_n;i++){ | ||||
|     os << getCoeffNum(i) << "*x^" << i; | ||||
|     if(i!=pow_n) os << " + "; | ||||
|   } | ||||
|   os << std::endl; | ||||
|  | ||||
|   os << "Denominator" << std::endl; | ||||
|   for(int i=0;i<=pow_d;i++){ | ||||
|     os << getCoeffDen(i) << "*x^" << i; | ||||
|     if(i!=pow_d) os << " + "; | ||||
|   } | ||||
|   os << std::endl; | ||||
|  | ||||
|   //For a true minimax solution the errors should all be equal and the signs should oscillate +-+-+- etc | ||||
|   int sign; | ||||
|   os << "Errors at maxima: coordinate, error, (sign)" << std::endl; | ||||
|   for(int i=0;i<neq+1;i++){  | ||||
|     os << mm[i] << " " << getErr(mm[i],&sign) << " (" << sign << ")" << std::endl; | ||||
|   } | ||||
|  | ||||
|   os << "Scan over range:" << std::endl; | ||||
|   int npt = 60; | ||||
|   bigfloat dlt = (apend - apstrt)/bigfloat(npt-1); | ||||
|  | ||||
|   for (bigfloat x=apstrt; x<=apend; x = x + dlt) { | ||||
|     double f = evaluateFunc(x); | ||||
|     double r = evaluateApprox(x); | ||||
|     os<< x<<","<<r<<","<<f<<","<<r-f<<std::endl; | ||||
|   } | ||||
|   return; | ||||
| } | ||||
							
								
								
									
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							| @@ -0,0 +1,170 @@ | ||||
| /* | ||||
|   C.Kelly Jan 2020 based on implementation by M. Clark May 2005 | ||||
|  | ||||
|   AlgRemezGeneral is an implementation of the Remez algorithm for approximating an arbitrary function by a rational polynomial  | ||||
|   It includes optional restriction to odd/even polynomials for the numerator and/or denominator | ||||
| */ | ||||
|  | ||||
| #ifndef INCLUDED_ALG_REMEZ_GENERAL_H | ||||
| #define INCLUDED_ALG_REMEZ_GENERAL_H | ||||
|  | ||||
| #include <stddef.h> | ||||
| #include <Grid/GridStd.h> | ||||
|  | ||||
| #ifdef HAVE_LIBGMP | ||||
| #include "bigfloat.h" | ||||
| #else | ||||
| #include "bigfloat_double.h" | ||||
| #endif | ||||
|  | ||||
|  | ||||
| class AlgRemezGeneral{ | ||||
|  public: | ||||
|   enum PolyType { Even, Odd, Full }; | ||||
|  | ||||
|  private: | ||||
|  | ||||
|   // In GSL-style, pass the function as a function pointer. Any data required to evaluate the function is passed in as a void pointer | ||||
|   bigfloat (*f)(bigfloat x, void *data); | ||||
|   void *data; | ||||
|  | ||||
|   // The approximation parameters | ||||
|   std::vector<bigfloat> param; | ||||
|   bigfloat norm; | ||||
|  | ||||
|   // The number of non-zero terms in the numerator and denominator | ||||
|   int n, d; | ||||
|   // The numerator and denominator degree (i.e.  the largest power) | ||||
|   int pow_n, pow_d; | ||||
|    | ||||
|   // Specify if the numerator and/or denominator are odd/even polynomials | ||||
|   PolyType num_type; | ||||
|   PolyType den_type; | ||||
|   std::vector<int> num_pows; //contains the mapping, with -1 if not present | ||||
|   std::vector<int> den_pows; | ||||
|  | ||||
|   // The bounds of the approximation | ||||
|   bigfloat apstrt, apwidt, apend; | ||||
|  | ||||
|   // Variables used to calculate the approximation | ||||
|   int nd1, iter; | ||||
|   std::vector<bigfloat> xx; | ||||
|   std::vector<bigfloat> mm; | ||||
|   std::vector<bigfloat> step; | ||||
|  | ||||
|   bigfloat delta, spread; | ||||
|    | ||||
|   // Variables used in search | ||||
|   std::vector<bigfloat> yy; | ||||
|  | ||||
|   // Variables used in solving linear equations | ||||
|   std::vector<bigfloat> A; | ||||
|   std::vector<bigfloat> B; | ||||
|   std::vector<int> IPS; | ||||
|  | ||||
|   // The number of equations we must solve at each iteration (n+d+1) | ||||
|   int neq; | ||||
|  | ||||
|   // The precision of the GNU MP library | ||||
|   long prec; | ||||
|  | ||||
|   // Initialize member variables associated with the polynomial's properties | ||||
|   void setupPolyProperties(int num_degree, int den_degree, PolyType num_type_in, PolyType den_type_in); | ||||
|  | ||||
|   // Initial values of maximal and minmal errors | ||||
|   void initialGuess(); | ||||
|  | ||||
|   // Initialise step sizes | ||||
|   void stpini(); | ||||
|  | ||||
|   // Initialize the algorithm | ||||
|   void reinitializeAlgorithm(); | ||||
|  | ||||
|   // Solve the equations | ||||
|   void equations(); | ||||
|  | ||||
|   // Search for error maxima and minima | ||||
|   void search();  | ||||
|  | ||||
|   // Calculate function required for the approximation | ||||
|   inline bigfloat func(bigfloat x) const{ | ||||
|     return f(x, data); | ||||
|   } | ||||
|  | ||||
|   // Compute size and sign of the approximation error at x | ||||
|   bigfloat getErr(bigfloat x, int *sign) const; | ||||
|  | ||||
|   // Solve the system AX=B   where X = param | ||||
|   int simq(); | ||||
|  | ||||
|   // Evaluate the rational form P(x)/Q(x) using coefficients from the solution vector param | ||||
|   bigfloat approx(bigfloat x) const; | ||||
|  | ||||
|  public: | ||||
|    | ||||
|   AlgRemezGeneral(double lower, double upper, long prec, | ||||
| 		  bigfloat (*f)(bigfloat x, void *data), void *data); | ||||
|  | ||||
|   inline int getDegree(void) const{  | ||||
|     assert(n==d); | ||||
|     return n; | ||||
|   } | ||||
|   // Reset the bounds of the approximation | ||||
|   inline void setBounds(double lower, double upper) { | ||||
|     apstrt = lower; | ||||
|     apend = upper; | ||||
|     apwidt = apend - apstrt; | ||||
|   } | ||||
|  | ||||
|   // Get the bounds of the approximation | ||||
|   inline void getBounds(double &lower, double &upper) const{  | ||||
|     lower=(double)apstrt; | ||||
|     upper=(double)apend; | ||||
|   } | ||||
|  | ||||
|   // Run the algorithm to generate the rational approximation | ||||
|   double generateApprox(int num_degree, int den_degree,  | ||||
| 			PolyType num_type, PolyType den_type, | ||||
| 			const double tolerance = 1e-15, const int report_freq = 1000); | ||||
|    | ||||
|   inline double generateApprox(int num_degree, int den_degree,  | ||||
| 			       const double tolerance = 1e-15, const int report_freq = 1000){ | ||||
|     return generateApprox(num_degree, den_degree, Full, Full, tolerance, report_freq); | ||||
|   } | ||||
|    | ||||
|   // Evaluate the rational form P(x)/Q(x) using coefficients from the | ||||
|   // solution vector param | ||||
|   inline double evaluateApprox(double x) const{ | ||||
|     return (double)approx((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Evaluate the rational form Q(x)/P(x) using coefficients from the solution vector param | ||||
|   inline double evaluateInverseApprox(double x) const{ | ||||
|     return 1.0/(double)approx((bigfloat)x); | ||||
|   }   | ||||
|  | ||||
|   // Calculate function required for the approximation | ||||
|   inline double evaluateFunc(double x) const{ | ||||
|     return (double)func((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Calculate inverse function required for the approximation | ||||
|   inline double evaluateInverseFunc(double x) const{ | ||||
|     return 1.0/(double)func((bigfloat)x); | ||||
|   } | ||||
|  | ||||
|   // Dump csv of function, approx and error | ||||
|   void csv(std::ostream &os = std::cout) const; | ||||
|  | ||||
|   // Get the coefficient of the term x^i in the numerator | ||||
|   inline double getCoeffNum(const int i) const{     | ||||
|     return num_pows[i] == -1 ? 0. : double(param[num_pows[i]]); | ||||
|   } | ||||
|   // Get the coefficient of the term x^i in the denominator | ||||
|   inline double getCoeffDen(const int i) const{  | ||||
|     if(i == pow_d) return 1.0; | ||||
|     else return den_pows[i] == -1 ? 0. : double(param[den_pows[i]+n+1]);  | ||||
|   } | ||||
| }; | ||||
|  | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/approx/ZMobius.cc
									
									
									
									
									
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							| @@ -0,0 +1,183 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/approx/ZMobius.cc | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #include <Grid/algorithms/approx/ZMobius.h> | ||||
| #include <Grid/algorithms/approx/RemezGeneral.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
|  | ||||
| //Compute the tanh approximation | ||||
| inline double epsilonMobius(const double x, const std::vector<ComplexD> &w){ | ||||
|   int Ls = w.size(); | ||||
|  | ||||
|   ComplexD fxp = 1., fmp = 1.; | ||||
|   for(int i=0;i<Ls;i++){ | ||||
|     fxp = fxp * ( w[i] + x ); | ||||
|     fmp = fmp * ( w[i] - x ); | ||||
|   } | ||||
|   return ((fxp - fmp)/(fxp + fmp)).real(); | ||||
| } | ||||
| inline double epsilonMobius(const double x, const std::vector<RealD> &w){ | ||||
|   int Ls = w.size(); | ||||
|  | ||||
|   double fxp = 1., fmp = 1.; | ||||
|   for(int i=0;i<Ls;i++){ | ||||
|     fxp = fxp * ( w[i] + x ); | ||||
|     fmp = fmp * ( w[i] - x ); | ||||
|   } | ||||
|   return (fxp - fmp)/(fxp + fmp); | ||||
| } | ||||
|  | ||||
|  | ||||
|  | ||||
| //Compute the tanh approximation in a form suitable for the Remez | ||||
| bigfloat epsilonMobius(bigfloat x, void* data){ | ||||
|   const std::vector<RealD> &omega = *( (std::vector<RealD> const*)data ); | ||||
|   bigfloat fxp(1.0); | ||||
|   bigfloat fmp(1.0); | ||||
|  | ||||
|   for(int i=0;i<omega.size();i++){ | ||||
|     fxp = fxp * ( bigfloat(omega[i]) + x); | ||||
|     fmp = fmp * ( bigfloat(omega[i]) - x); | ||||
|   } | ||||
|   return (fxp - fmp)/(fxp + fmp); | ||||
| } | ||||
|  | ||||
| //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||
| //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||
| 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound){ | ||||
|   assert(omega_in.size() == Ls_in); | ||||
|   omega_out.resize(Ls_out); | ||||
|  | ||||
|   //Use the Remez algorithm to generate the appropriate rational polynomial | ||||
|   //For odd polynomial, to satisfy Haar condition must take either positive or negative half of range (cf https://arxiv.org/pdf/0803.0439.pdf page 6)   | ||||
|   AlgRemezGeneral remez(0, lambda_bound, 64, &epsilonMobius, (void*)&omega_in);  | ||||
|   remez.generateApprox(Ls_out-1, Ls_out,AlgRemezGeneral::Odd, AlgRemezGeneral::Even, 1e-15, 100); | ||||
|   remez.csv(std::cout); | ||||
|  | ||||
|   //The rational approximation has the form  [ f(x) - f(-x) ] / [ f(x) + f(-x) ]  where  f(x) = \Prod_{i=0}^{L_s-1} ( \omega_i + x ) | ||||
|   //cf https://academiccommons.columbia.edu/doi/10.7916/D8T72HD7  pg 102 | ||||
|   //omega_i are therefore the negative of the complex roots of f(x) | ||||
|  | ||||
|   //We can find the roots by recognizing that the eigenvalues of a matrix A are the roots of the characteristic polynomial | ||||
|   // \rho(\lambda) = det( A - \lambda I )    where I is the unit matrix | ||||
|   //The matrix whose characteristic polynomial is an arbitrary monic polynomial a0 + a1 x + a2 x^2 + ... x^n   is the companion matrix  | ||||
|   // A = | 0    1   0    0 0 .... 0 | | ||||
|   //     | 0    0   1    0 0 .... 0 | | ||||
|   //     | :    :   :    : :      : | | ||||
|   //     | 0    0   0    0 0      1 | ||||
|   //     | -a0 -a1 -a2  ...  ... -an| | ||||
|  | ||||
|  | ||||
|   //Note the Remez defines the largest power to have unit coefficient | ||||
|   std::vector<RealD> coeffs(Ls_out+1); | ||||
|   for(int i=0;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffDen(i); //even powers | ||||
|   for(int i=1;i<Ls_out+1;i+=2) coeffs[i] = coeffs[i] = remez.getCoeffNum(i); //odd powers | ||||
|  | ||||
|   std::vector<std::complex<RealD> > roots(Ls_out); | ||||
|  | ||||
|   //Form the companion matrix | ||||
|   Eigen::MatrixXd compn(Ls_out,Ls_out); | ||||
|   for(int i=0;i<Ls_out-1;i++) compn(i,0) = 0.; | ||||
|   compn(Ls_out - 1, 0) = -coeffs[0]; | ||||
|    | ||||
|   for(int j=1;j<Ls_out;j++){ | ||||
|     for(int i=0;i<Ls_out-1;i++) compn(i,j) = i == j-1 ? 1. : 0.; | ||||
|     compn(Ls_out - 1, j) = -coeffs[j]; | ||||
|   } | ||||
|  | ||||
|   //Eigensolve | ||||
|   Eigen::EigenSolver<Eigen::MatrixXd> slv(compn, false); | ||||
|  | ||||
|   const auto & ev = slv.eigenvalues(); | ||||
|   for(int i=0;i<Ls_out;i++) | ||||
|     omega_out[i] = -ev(i); | ||||
|  | ||||
|   //Sort ascending (smallest at start of vector!) | ||||
|   std::sort(omega_out.begin(), omega_out.end(),  | ||||
| 	    [&](const ComplexD &a, const ComplexD &b){ return a.real() < b.real() || (a.real() == b.real() && a.imag() < b.imag()); }); | ||||
|  | ||||
|   //McGlynn thesis pg 122 suggest improved iteration counts if magnitude of omega diminishes towards the center of the 5th dimension | ||||
|   std::vector<ComplexD> omega_tmp = omega_out; | ||||
|   int s_low=0, s_high=Ls_out-1, ss=0; | ||||
|   for(int s_from = Ls_out-1; s_from >= 0; s_from--){ //loop from largest omega | ||||
|     int s_to; | ||||
|     if(ss % 2 == 0){ | ||||
|       s_to = s_low++; | ||||
|     }else{ | ||||
|       s_to = s_high--; | ||||
|     } | ||||
|     omega_out[s_to] = omega_tmp[s_from]; | ||||
|     ++ss; | ||||
|   } | ||||
|    | ||||
|   std::cout << "Resulting omega_i:" << std::endl;   | ||||
|   for(int i=0;i<Ls_out;i++) | ||||
|     std::cout << omega_out[i] << std::endl; | ||||
|  | ||||
|   std::cout << "Test result matches the approximate polynomial found by the Remez" << std::endl; | ||||
|   std::cout << "<x> <remez approx> <poly approx> <diff poly approx remez approx> <exact> <diff poly approx exact>\n"; | ||||
|    | ||||
|   int npt = 60; | ||||
|   double dlt = lambda_bound/double(npt-1); | ||||
|  | ||||
|   for (int i =0; i<npt; i++){ | ||||
|     double x = i*dlt; | ||||
|     double r = remez.evaluateApprox(x); | ||||
|     double p = epsilonMobius(x, omega_out); | ||||
|     double e = epsilonMobius(x, omega_in); | ||||
|  | ||||
|     std::cout << x<< " " << r << " " << p <<" " <<r-p << " " << e << " " << e-p << std::endl; | ||||
|   } | ||||
|  | ||||
| } | ||||
|    | ||||
| //mobius_param = b+c   with b-c=1 | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||
|   std::vector<RealD> omega_in(Ls_in, 1./mobius_param); | ||||
|   computeZmobiusOmega(omega_out, Ls_out, omega_in, Ls_in, lambda_bound); | ||||
| } | ||||
|  | ||||
| //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||
| 			 const RealD mobius_param_out, const int Ls_out,  | ||||
| 			 const RealD mobius_param_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound){ | ||||
|   computeZmobiusOmega(gamma_out, Ls_out, mobius_param_in, Ls_in, lambda_bound); | ||||
|   for(int i=0;i<Ls_out;i++) gamma_out[i] = gamma_out[i] * mobius_param_out; | ||||
| } | ||||
| //Assumes mobius_param_out == mobius_param_in | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound){ | ||||
|   computeZmobiusGamma(gamma_out, mobius_param, Ls_out, mobius_param, Ls_in, lambda_bound); | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
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										57
									
								
								Grid/algorithms/approx/ZMobius.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,57 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/approx/ZMobius.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_ZMOBIUS_APPROX_H | ||||
| #define GRID_ZMOBIUS_APPROX_H | ||||
|  | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
|  | ||||
| //Compute the Zmobius Omega parameters suitable for eigenvalue range   -lambda_bound <= lambda <= lambda_bound | ||||
| //Note omega_i = 1/(b_i + c_i)   where b_i and c_i are the Mobius parameters | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, | ||||
| 			 const std::vector<RealD> &omega_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound); | ||||
|    | ||||
| //mobius_param = b+c   with b-c=1 | ||||
| void computeZmobiusOmega(std::vector<ComplexD> &omega_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||
|  | ||||
| //ZMobius class takes  gamma_i = (b+c) omega_i as its input, where b, c are factored out | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out,  | ||||
| 			 const RealD mobius_param_out, const int Ls_out,  | ||||
| 			 const RealD mobius_param_in, const int Ls_in, | ||||
| 			 const RealD lambda_bound); | ||||
|  | ||||
| //Assumes mobius_param_out == mobius_param_in | ||||
| void computeZmobiusGamma(std::vector<ComplexD> &gamma_out, const int Ls_out, const RealD mobius_param, const int Ls_in, const RealD lambda_bound); | ||||
|  | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -58,8 +58,8 @@ | ||||
| 
 | ||||
| /* Compute the partial fraction expansion coefficients (alpha) from the
 | ||||
|  * factored form */ | ||||
| namespace Grid { | ||||
| namespace Approx { | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
| 
 | ||||
| static void construct_partfrac(izd *z) { | ||||
|   int dn = z -> dn, dd = z -> dd, type = z -> type; | ||||
| @@ -293,7 +293,7 @@ static void sncndnFK(INTERNAL_PRECISION u, INTERNAL_PRECISION k, | ||||
|  * Set type = 0 for the Zolotarev approximation, which is zero at x = 0, and | ||||
|  * type = 1 for the approximation which is infinite at x = 0. */ | ||||
| 
 | ||||
| zolotarev_data* zolotarev(PRECISION epsilon, int n, int type) { | ||||
| zolotarev_data* zolotarev(ZOLO_PRECISION epsilon, int n, int type) { | ||||
|   INTERNAL_PRECISION A, c, cp, kp, ksq, sn, cn, dn, Kp, Kj, z, z0, t, M, F, | ||||
|     l, invlambda, xi, xisq, *tv, s, opl; | ||||
|   int m, czero, ts; | ||||
| @@ -375,12 +375,12 @@ zolotarev_data* zolotarev(PRECISION epsilon, int n, int type) { | ||||
|   construct_partfrac(d); | ||||
|   construct_contfrac(d); | ||||
| 
 | ||||
|   /* Converting everything to PRECISION for external use only */ | ||||
|   /* Converting everything to ZOLO_PRECISION for external use only */ | ||||
| 
 | ||||
|   zd = (zolotarev_data*) malloc(sizeof(zolotarev_data)); | ||||
|   zd -> A = (PRECISION) d -> A; | ||||
|   zd -> Delta = (PRECISION) d -> Delta; | ||||
|   zd -> epsilon = (PRECISION) d -> epsilon; | ||||
|   zd -> A = (ZOLO_PRECISION) d -> A; | ||||
|   zd -> Delta = (ZOLO_PRECISION) d -> Delta; | ||||
|   zd -> epsilon = (ZOLO_PRECISION) d -> epsilon; | ||||
|   zd -> n = d -> n; | ||||
|   zd -> type = d -> type; | ||||
|   zd -> dn = d -> dn; | ||||
| @@ -390,24 +390,24 @@ zolotarev_data* zolotarev(PRECISION epsilon, int n, int type) { | ||||
|   zd -> deg_num = d -> deg_num; | ||||
|   zd -> deg_denom = d -> deg_denom; | ||||
| 
 | ||||
|   zd -> a = (PRECISION*) malloc(zd -> dn * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> dn; m++) zd -> a[m] = (PRECISION) d -> a[m]; | ||||
|   zd -> a = (ZOLO_PRECISION*) malloc(zd -> dn * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> dn; m++) zd -> a[m] = (ZOLO_PRECISION) d -> a[m]; | ||||
|   free(d -> a); | ||||
| 
 | ||||
|   zd -> ap = (PRECISION*) malloc(zd -> dd * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> dd; m++) zd -> ap[m] = (PRECISION) d -> ap[m]; | ||||
|   zd -> ap = (ZOLO_PRECISION*) malloc(zd -> dd * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> dd; m++) zd -> ap[m] = (ZOLO_PRECISION) d -> ap[m]; | ||||
|   free(d -> ap); | ||||
| 
 | ||||
|   zd -> alpha = (PRECISION*) malloc(zd -> da * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> da; m++) zd -> alpha[m] = (PRECISION) d -> alpha[m]; | ||||
|   zd -> alpha = (ZOLO_PRECISION*) malloc(zd -> da * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> da; m++) zd -> alpha[m] = (ZOLO_PRECISION) d -> alpha[m]; | ||||
|   free(d -> alpha); | ||||
| 
 | ||||
|   zd -> beta = (PRECISION*) malloc(zd -> db * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> db; m++) zd -> beta[m] = (PRECISION) d -> beta[m]; | ||||
|   zd -> beta = (ZOLO_PRECISION*) malloc(zd -> db * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> db; m++) zd -> beta[m] = (ZOLO_PRECISION) d -> beta[m]; | ||||
|   free(d -> beta); | ||||
| 
 | ||||
|   zd -> gamma = (PRECISION*) malloc(zd -> n * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> n; m++) zd -> gamma[m] = (PRECISION) d -> gamma[m]; | ||||
|   zd -> gamma = (ZOLO_PRECISION*) malloc(zd -> n * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> n; m++) zd -> gamma[m] = (ZOLO_PRECISION) d -> gamma[m]; | ||||
|   free(d -> gamma); | ||||
| 
 | ||||
|   free(d); | ||||
| @@ -426,7 +426,7 @@ void zolotarev_free(zolotarev_data *zdata) | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| zolotarev_data* higham(PRECISION epsilon, int n) { | ||||
| zolotarev_data* higham(ZOLO_PRECISION epsilon, int n) { | ||||
|   INTERNAL_PRECISION A, M, c, cp, z, z0, t, epssq; | ||||
|   int m, czero; | ||||
|   zolotarev_data *zd; | ||||
| @@ -481,9 +481,9 @@ zolotarev_data* higham(PRECISION epsilon, int n) { | ||||
|   /* Converting everything to PRECISION for external use only */ | ||||
| 
 | ||||
|   zd = (zolotarev_data*) malloc(sizeof(zolotarev_data)); | ||||
|   zd -> A = (PRECISION) d -> A; | ||||
|   zd -> Delta = (PRECISION) d -> Delta; | ||||
|   zd -> epsilon = (PRECISION) d -> epsilon; | ||||
|   zd -> A = (ZOLO_PRECISION) d -> A; | ||||
|   zd -> Delta = (ZOLO_PRECISION) d -> Delta; | ||||
|   zd -> epsilon = (ZOLO_PRECISION) d -> epsilon; | ||||
|   zd -> n = d -> n; | ||||
|   zd -> type = d -> type; | ||||
|   zd -> dn = d -> dn; | ||||
| @@ -493,45 +493,47 @@ zolotarev_data* higham(PRECISION epsilon, int n) { | ||||
|   zd -> deg_num = d -> deg_num; | ||||
|   zd -> deg_denom = d -> deg_denom; | ||||
| 
 | ||||
|   zd -> a = (PRECISION*) malloc(zd -> dn * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> dn; m++) zd -> a[m] = (PRECISION) d -> a[m]; | ||||
|   zd -> a = (ZOLO_PRECISION*) malloc(zd -> dn * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> dn; m++) zd -> a[m] = (ZOLO_PRECISION) d -> a[m]; | ||||
|   free(d -> a); | ||||
| 
 | ||||
|   zd -> ap = (PRECISION*) malloc(zd -> dd * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> dd; m++) zd -> ap[m] = (PRECISION) d -> ap[m]; | ||||
|   zd -> ap = (ZOLO_PRECISION*) malloc(zd -> dd * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> dd; m++) zd -> ap[m] = (ZOLO_PRECISION) d -> ap[m]; | ||||
|   free(d -> ap); | ||||
| 
 | ||||
|   zd -> alpha = (PRECISION*) malloc(zd -> da * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> da; m++) zd -> alpha[m] = (PRECISION) d -> alpha[m]; | ||||
|   zd -> alpha = (ZOLO_PRECISION*) malloc(zd -> da * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> da; m++) zd -> alpha[m] = (ZOLO_PRECISION) d -> alpha[m]; | ||||
|   free(d -> alpha); | ||||
| 
 | ||||
|   zd -> beta = (PRECISION*) malloc(zd -> db * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> db; m++) zd -> beta[m] = (PRECISION) d -> beta[m]; | ||||
|   zd -> beta = (ZOLO_PRECISION*) malloc(zd -> db * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> db; m++) zd -> beta[m] = (ZOLO_PRECISION) d -> beta[m]; | ||||
|   free(d -> beta); | ||||
| 
 | ||||
|   zd -> gamma = (PRECISION*) malloc(zd -> n * sizeof(PRECISION)); | ||||
|   for (m = 0; m < zd -> n; m++) zd -> gamma[m] = (PRECISION) d -> gamma[m]; | ||||
|   zd -> gamma = (ZOLO_PRECISION*) malloc(zd -> n * sizeof(ZOLO_PRECISION)); | ||||
|   for (m = 0; m < zd -> n; m++) zd -> gamma[m] = (ZOLO_PRECISION) d -> gamma[m]; | ||||
|   free(d -> gamma); | ||||
| 
 | ||||
|   free(d); | ||||
|   return zd; | ||||
| } | ||||
| }} | ||||
| 
 | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
| 
 | ||||
| #ifdef TEST | ||||
| 
 | ||||
| #undef ZERO | ||||
| #define ZERO ((PRECISION) 0) | ||||
| #define ZERO ((ZOLO_PRECISION) 0) | ||||
| #undef ONE | ||||
| #define ONE ((PRECISION) 1) | ||||
| #define ONE ((ZOLO_PRECISION) 1) | ||||
| #undef TWO | ||||
| #define TWO ((PRECISION) 2) | ||||
| #define TWO ((ZOLO_PRECISION) 2) | ||||
| 
 | ||||
| /* Evaluate the rational approximation R(x) using the factored form */ | ||||
| 
 | ||||
| static PRECISION zolotarev_eval(PRECISION x, zolotarev_data* rdata) { | ||||
| static ZOLO_PRECISION zolotarev_eval(ZOLO_PRECISION x, zolotarev_data* rdata) { | ||||
|   int m; | ||||
|   PRECISION R; | ||||
|   ZOLO_PRECISION R; | ||||
| 
 | ||||
|   if (rdata -> type == 0) { | ||||
|     R = rdata -> A * x; | ||||
| @@ -549,9 +551,9 @@ static PRECISION zolotarev_eval(PRECISION x, zolotarev_data* rdata) { | ||||
| 
 | ||||
| /* Evaluate the rational approximation R(x) using the partial fraction form */ | ||||
| 
 | ||||
| static PRECISION zolotarev_partfrac_eval(PRECISION x, zolotarev_data* rdata) { | ||||
| static ZOLO_PRECISION zolotarev_partfrac_eval(ZOLO_PRECISION x, zolotarev_data* rdata) { | ||||
|   int m; | ||||
|   PRECISION R = rdata -> alpha[rdata -> da - 1]; | ||||
|   ZOLO_PRECISION R = rdata -> alpha[rdata -> da - 1]; | ||||
|   for (m = 0; m < rdata -> dd; m++) | ||||
|     R += rdata -> alpha[m] / (x * x - rdata -> ap[m]); | ||||
|   if (rdata -> type == 1) R += rdata -> alpha[rdata -> dd] / (x * x); | ||||
| @@ -566,18 +568,18 @@ static PRECISION zolotarev_partfrac_eval(PRECISION x, zolotarev_data* rdata) { | ||||
|  * non-signalling overflow this will work correctly since 1/(1/0) = 1/INF = 0, | ||||
|  * but with signalling overflow you will get an error message. */ | ||||
| 
 | ||||
| static PRECISION zolotarev_contfrac_eval(PRECISION x, zolotarev_data* rdata) { | ||||
| static ZOLO_PRECISION zolotarev_contfrac_eval(ZOLO_PRECISION x, zolotarev_data* rdata) { | ||||
|   int m; | ||||
|   PRECISION R = rdata -> beta[0] * x; | ||||
|   ZOLO_PRECISION R = rdata -> beta[0] * x; | ||||
|   for (m = 1; m < rdata -> db; m++) R = rdata -> beta[m] * x + ONE / R; | ||||
|   return R; | ||||
| }     | ||||
| 
 | ||||
| /* Evaluate the rational approximation R(x) using Cayley form */ | ||||
| 
 | ||||
| static PRECISION zolotarev_cayley_eval(PRECISION x, zolotarev_data* rdata) { | ||||
| static ZOLO_PRECISION zolotarev_cayley_eval(ZOLO_PRECISION x, zolotarev_data* rdata) { | ||||
|   int m; | ||||
|   PRECISION T; | ||||
|   ZOLO_PRECISION T; | ||||
| 
 | ||||
|   T = rdata -> type == 0 ? ONE : -ONE; | ||||
|   for (m = 0; m < rdata -> n; m++) | ||||
| @@ -585,6 +587,7 @@ static PRECISION zolotarev_cayley_eval(PRECISION x, zolotarev_data* rdata) { | ||||
|   return (ONE - T) / (ONE + T); | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| /* Test program. Apart from printing out the parameters for R(x) it produces
 | ||||
|  * the following data files for plotting (unless NPLOT is defined): | ||||
|  * | ||||
| @@ -604,7 +607,7 @@ int main(int argc, char** argv) { | ||||
|   int m, n, plotpts = 5000, type = 0; | ||||
|   float eps, x, ypferr, ycferr, ycaylerr, maxypferr, maxycferr, maxycaylerr; | ||||
|   zolotarev_data *rdata; | ||||
|   PRECISION y; | ||||
|   ZOLO_PRECISION y; | ||||
|   FILE *plot_function, *plot_error,  | ||||
|     *plot_partfrac, *plot_contfrac, *plot_cayley; | ||||
| 
 | ||||
| @@ -623,13 +626,13 @@ int main(int argc, char** argv) { | ||||
|   } | ||||
| 
 | ||||
|   rdata = type == 2  | ||||
|     ? higham((PRECISION) eps, n)  | ||||
|     : zolotarev((PRECISION) eps, n, type); | ||||
|     ? higham((ZOLO_PRECISION) eps, n)  | ||||
|     : zolotarev((ZOLO_PRECISION) eps, n, type); | ||||
| 
 | ||||
|   printf("Zolotarev Test: R(epsilon = %g, n = %d, type = %d)\n\t"  | ||||
| 	 STRINGIFY(VERSION) "\n\t" STRINGIFY(HVERSION) | ||||
| 	 "\n\tINTERNAL_PRECISION = " STRINGIFY(INTERNAL_PRECISION) | ||||
| 	 "\tPRECISION = " STRINGIFY(PRECISION) | ||||
| 	 "\tZOLO_PRECISION = " STRINGIFY(ZOLO_PRECISION) | ||||
| 	 "\n\n\tRational approximation of degree (%d,%d), %s at x = 0\n" | ||||
| 	 "\tDelta = %g (maximum error)\n\n" | ||||
| 	 "\tA = %g (overall factor)\n", | ||||
| @@ -678,15 +681,15 @@ int main(int argc, char** argv) { | ||||
|     x = 2.4 * (float) m / plotpts - 1.2; | ||||
|     if (rdata -> type == 0 || fabs(x) * (float) plotpts > 1.0) { | ||||
|       /* skip x = 0 for type 1, as R(0) is singular */ | ||||
|       y = zolotarev_eval((PRECISION) x, rdata); | ||||
|       y = zolotarev_eval((ZOLO_PRECISION) x, rdata); | ||||
|       fprintf(plot_function, "%g %g\n", x, (float) y); | ||||
|       fprintf(plot_error, "%g %g\n", | ||||
| 	      x, (float)((y - ((x > 0.0 ? ONE : -ONE))) / rdata -> Delta)); | ||||
|       ypferr = (float)((zolotarev_partfrac_eval((PRECISION) x, rdata) - y) | ||||
|       ypferr = (float)((zolotarev_partfrac_eval((ZOLO_PRECISION) x, rdata) - y) | ||||
| 		       / rdata -> Delta); | ||||
|       ycferr = (float)((zolotarev_contfrac_eval((PRECISION) x, rdata) - y) | ||||
|       ycferr = (float)((zolotarev_contfrac_eval((ZOLO_PRECISION) x, rdata) - y) | ||||
| 		       / rdata -> Delta); | ||||
|       ycaylerr = (float)((zolotarev_cayley_eval((PRECISION) x, rdata) - y) | ||||
|       ycaylerr = (float)((zolotarev_cayley_eval((ZOLO_PRECISION) x, rdata) - y) | ||||
| 		       / rdata -> Delta); | ||||
|       if (fabs(x) < 1.0 && fabs(x) > rdata -> epsilon) { | ||||
| 	maxypferr = MAX(maxypferr, fabs(ypferr)); | ||||
| @@ -723,5 +726,5 @@ int main(int argc, char** argv) { | ||||
|   return EXIT_SUCCESS; | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| #endif /* TEST */ | ||||
| 
 | ||||
| @@ -1,18 +1,18 @@ | ||||
| /* -*- Mode: C; comment-column: 22; fill-column: 79; -*- */ | ||||
| 
 | ||||
| #ifdef __cplusplus | ||||
| namespace Grid { | ||||
| namespace Approx { | ||||
| #include <Grid/Namespace.h> | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| NAMESPACE_BEGIN(Approx); | ||||
| #endif | ||||
| 
 | ||||
| #define HVERSION Header Time-stamp: <14-OCT-2004 09:26:51.00 adk@MISSCONTRARY> | ||||
| 
 | ||||
| 
 | ||||
| #ifndef ZOLOTAREV_INTERNAL | ||||
| #ifndef PRECISION | ||||
| #define PRECISION double | ||||
| #ifndef ZOLO_PRECISION | ||||
| #define ZOLO_PRECISION double | ||||
| #endif | ||||
| #define ZPRECISION PRECISION | ||||
| #define ZPRECISION ZOLO_PRECISION | ||||
| #define ZOLOTAREV_DATA zolotarev_data | ||||
| #endif | ||||
| 
 | ||||
| @@ -77,11 +77,13 @@ typedef struct { | ||||
|  * zolotarev_data structure. The arguments must satisfy the constraints that | ||||
|  * epsilon > 0, n > 0, and type = 0 or 1. */ | ||||
| 
 | ||||
| ZOLOTAREV_DATA* higham(PRECISION epsilon, int n) ; | ||||
| ZOLOTAREV_DATA* zolotarev(PRECISION epsilon, int n, int type); | ||||
| ZOLOTAREV_DATA* higham(ZOLO_PRECISION epsilon, int n) ; | ||||
| ZOLOTAREV_DATA* zolotarev(ZOLO_PRECISION epsilon, int n, int type); | ||||
| void zolotarev_free(zolotarev_data *zdata); | ||||
| #endif | ||||
| 
 | ||||
| #ifdef __cplusplus | ||||
| }} | ||||
| NAMESPACE_END(Approx); | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| 
 | ||||
| @@ -10,10 +10,12 @@ | ||||
| #ifndef INCLUDED_BIGFLOAT_H | ||||
| #define INCLUDED_BIGFLOAT_H | ||||
| 
 | ||||
| 
 | ||||
| #define __GMP_WITHIN_CONFIGURE | ||||
| #include <gmp.h> | ||||
| #include <mpf2mpfr.h> | ||||
| #include <mpfr.h> | ||||
| #undef  __GMP_WITHIN_CONFIGURE | ||||
| 
 | ||||
| class bigfloat { | ||||
| 
 | ||||
| private: | ||||
| @@ -25,6 +25,10 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| 
 | ||||
| #ifndef INCLUDED_BIGFLOAT_DOUBLE_H | ||||
| #define INCLUDED_BIGFLOAT_DOUBLE_H | ||||
| 
 | ||||
| #include <math.h> | ||||
| 
 | ||||
| typedef double mfloat;  | ||||
| @@ -186,4 +190,6 @@ public: | ||||
|   //  friend bigfloat& random(void);
 | ||||
| }; | ||||
| 
 | ||||
| #endif | ||||
| 
 | ||||
| 
 | ||||
							
								
								
									
										34
									
								
								Grid/algorithms/blas/BatchedBlas.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										34
									
								
								Grid/algorithms/blas/BatchedBlas.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,34 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: BatchedBlas.h | ||||
|  | ||||
|     Copyright (C) 2023 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #include <Grid/GridCore.h> | ||||
| #include <Grid/algorithms/blas/BatchedBlas.h> | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| gridblasHandle_t GridBLAS::gridblasHandle; | ||||
| int              GridBLAS::gridblasInit; | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										895
									
								
								Grid/algorithms/blas/BatchedBlas.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										895
									
								
								Grid/algorithms/blas/BatchedBlas.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,895 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: BatchedBlas.h | ||||
|  | ||||
|     Copyright (C) 2023 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| #ifdef GRID_HIP | ||||
| #include <hipblas/hipblas.h> | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
| #include <cublas_v2.h> | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
| #include <oneapi/mkl.hpp> | ||||
| #endif | ||||
| #if 0 | ||||
| #define GRID_ONE_MKL | ||||
| #endif | ||||
| #ifdef GRID_ONE_MKL | ||||
| #include <oneapi/mkl.hpp> | ||||
| #endif | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////	   | ||||
| // Need to rearrange lattice data to be in the right format for a | ||||
| // batched multiply. Might as well make these static, dense packed | ||||
| /////////////////////////////////////////////////////////////////////// | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| #ifdef GRID_HIP | ||||
|   typedef hipblasHandle_t gridblasHandle_t; | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|   typedef cublasHandle_t gridblasHandle_t; | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|   typedef sycl::queue *gridblasHandle_t; | ||||
| #endif | ||||
| #ifdef GRID_ONE_MKL | ||||
|   typedef sycl::queue *gridblasHandle_t; | ||||
| #endif | ||||
| #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) && !defined(GRID_ONE_MKL) | ||||
|   typedef int32_t gridblasHandle_t; | ||||
| #endif | ||||
|  | ||||
| enum GridBLASOperation_t { GridBLAS_OP_N, GridBLAS_OP_T, GridBLAS_OP_C } ; | ||||
|  | ||||
| class GridBLAS { | ||||
| public: | ||||
|  | ||||
|    | ||||
|   static gridblasHandle_t gridblasHandle; | ||||
|   static int            gridblasInit; | ||||
|    | ||||
|   static void Init(void) | ||||
|   { | ||||
|     if ( ! gridblasInit ) { | ||||
| #ifdef GRID_CUDA | ||||
|       std::cout << "cublasCreate"<<std::endl; | ||||
|       cublasCreate(&gridblasHandle); | ||||
|       cublasSetPointerMode(gridblasHandle, CUBLAS_POINTER_MODE_DEVICE); | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|       std::cout << "hipblasCreate"<<std::endl; | ||||
|       hipblasCreate(&gridblasHandle); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|       gridblasHandle = theGridAccelerator; | ||||
| #endif | ||||
| #ifdef GRID_ONE_MKL | ||||
|       sycl::gpu_selector selector; | ||||
|       sycl::device selectedDevice { selector }; | ||||
|       sycl::property_list q_prop{sycl::property::queue::in_order()}; | ||||
|       gridblasHandle =new sycl::queue (selectedDevice,q_prop); | ||||
| #endif | ||||
|       gridblasInit=1; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   // Force construct once | ||||
|   GridBLAS() { Init(); }; | ||||
|   ~GridBLAS() { }; | ||||
|    | ||||
|   ///////////////////////////////////////////////////////////////////////////////////// | ||||
|   // BLAS GEMM conventions: | ||||
|   ///////////////////////////////////////////////////////////////////////////////////// | ||||
|   // - C = alpha A * B + beta C | ||||
|   // Dimensions: | ||||
|   // - C_m.n | ||||
|   // - A_m.k | ||||
|   // - B_k.n | ||||
|   // - Flops = 8 M N K | ||||
|   // - Bytes = 2*sizeof(word) * (MN+MK+KN) | ||||
|   // M=60, N=12 | ||||
|   // Flop/Byte = 8 . 60.60.12 / (60.12+60.60+60.12)/16 = 4 so expect about 4 TF/s on a GCD | ||||
|   ///////////////////////////////////////////////////////////////////////////////////// | ||||
|   void synchronise(void) | ||||
|   { | ||||
| #ifdef GRID_HIP | ||||
|     auto err = hipDeviceSynchronize(); | ||||
|     assert(err==hipSuccess); | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     auto err = cudaDeviceSynchronize(); | ||||
|     assert(err==cudaSuccess); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|     accelerator_barrier(); | ||||
| #endif | ||||
| #ifdef GRID_ONE_MKL | ||||
|     gridblasHandle->wait(); | ||||
| #endif | ||||
|   } | ||||
|    | ||||
|   void gemmBatched(int m,int n, int k, | ||||
| 		   ComplexD alpha, | ||||
| 		   deviceVector<ComplexD*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<ComplexD*> &Bkn, | ||||
| 		   ComplexD beta, | ||||
| 		   deviceVector<ComplexD*> &Cmn) | ||||
|   { | ||||
|     gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N, | ||||
| 		m,n,k, | ||||
| 		alpha, | ||||
| 		Amk, | ||||
| 		Bkn, | ||||
| 		beta, | ||||
| 		Cmn); | ||||
|   } | ||||
|   void gemmBatched(int m,int n, int k, | ||||
| 		   ComplexF alpha, | ||||
| 		   deviceVector<ComplexF*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<ComplexF*> &Bkn, | ||||
| 		   ComplexF beta, | ||||
| 		   deviceVector<ComplexF*> &Cmn) | ||||
|   { | ||||
|     gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N, | ||||
| 		m,n,k, | ||||
| 		alpha, | ||||
| 		Amk, | ||||
| 		Bkn, | ||||
| 		beta, | ||||
| 		Cmn); | ||||
|   } | ||||
|   void gemmBatched(int m,int n, int k, | ||||
| 		   RealD alpha, | ||||
| 		   deviceVector<RealD*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<RealD*> &Bkn, | ||||
| 		   RealD beta, | ||||
| 		   deviceVector<RealD*> &Cmn) | ||||
|   { | ||||
|     gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N, | ||||
| 		m,n,k, | ||||
| 		alpha, | ||||
| 		Amk, | ||||
| 		Bkn, | ||||
| 		beta, | ||||
| 		Cmn); | ||||
|   } | ||||
|   void gemmBatched(int m,int n, int k, | ||||
| 		   RealF alpha, | ||||
| 		   deviceVector<RealF*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<RealF*> &Bkn, | ||||
| 		   RealF beta, | ||||
| 		   deviceVector<RealF*> &Cmn) | ||||
|   { | ||||
|     gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N, | ||||
| 		m,n,k, | ||||
| 		alpha, | ||||
| 		Amk, | ||||
| 		Bkn, | ||||
| 		beta, | ||||
| 		Cmn); | ||||
|   } | ||||
|  | ||||
|   void gemmBatched(GridBLASOperation_t OpA, | ||||
| 		   GridBLASOperation_t OpB, | ||||
| 		   int m,int n, int k, | ||||
| 		   ComplexD alpha, | ||||
| 		   deviceVector<ComplexD*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<ComplexD*> &Bkn, | ||||
| 		   ComplexD beta, | ||||
| 		   deviceVector<ComplexD*> &Cmn) | ||||
|   { | ||||
|     RealD t2=usecond(); | ||||
|     int32_t batchCount = Amk.size(); | ||||
|     assert(Bkn.size()==batchCount); | ||||
|     assert(Cmn.size()==batchCount); | ||||
|  | ||||
|     assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose | ||||
|     assert(OpB!=GridBLAS_OP_T); | ||||
|  | ||||
|     int lda = m; // m x k column major | ||||
|     int ldb = k; // k x n column major | ||||
|     int ldc = m; // m x b column major | ||||
|     if(OpA!=GridBLAS_OP_N) | ||||
|       lda = k; | ||||
|     if(OpB!=GridBLAS_OP_N) | ||||
|       ldb = n; | ||||
|      | ||||
|     static deviceVector<ComplexD> alpha_p(1); | ||||
|     static deviceVector<ComplexD> beta_p(1); | ||||
|     // can prestore the 1 and the zero on device | ||||
|     acceleratorCopyToDevice((void *)&alpha,(void *)&alpha_p[0],sizeof(ComplexD)); | ||||
|     acceleratorCopyToDevice((void *)&beta ,(void *)&beta_p[0],sizeof(ComplexD)); | ||||
|     RealD t0=usecond(); | ||||
|     //    std::cout << "ZgemmBatched mnk  "<<m<<","<<n<<","<<k<<" count "<<batchCount<<std::endl; | ||||
| #ifdef GRID_HIP | ||||
|     hipblasOperation_t hOpA; | ||||
|     hipblasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = HIPBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = HIPBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = HIPBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = HIPBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = HIPBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = HIPBLAS_OP_C; | ||||
|     auto err = hipblasZgemmBatched(gridblasHandle, | ||||
| 				   hOpA, | ||||
| 				   hOpB, | ||||
| 				   m,n,k, | ||||
| 				   (hipblasDoubleComplex *) &alpha_p[0], | ||||
| 				   (hipblasDoubleComplex **)&Amk[0], lda, | ||||
| 				   (hipblasDoubleComplex **)&Bkn[0], ldb, | ||||
| 				   (hipblasDoubleComplex *) &beta_p[0], | ||||
| 				   (hipblasDoubleComplex **)&Cmn[0], ldc, | ||||
| 				   batchCount); | ||||
|     //	 std::cout << " hipblas return code " <<(int)err<<std::endl; | ||||
|     assert(err==HIPBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     cublasOperation_t hOpA; | ||||
|     cublasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = CUBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = CUBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = CUBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = CUBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = CUBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = CUBLAS_OP_C; | ||||
|     auto err = cublasZgemmBatched(gridblasHandle, | ||||
| 				  hOpA, | ||||
| 				  hOpB, | ||||
| 				  m,n,k, | ||||
| 				  (cuDoubleComplex *) &alpha_p[0], | ||||
| 				  (cuDoubleComplex **)&Amk[0], lda, | ||||
| 				  (cuDoubleComplex **)&Bkn[0], ldb, | ||||
| 				  (cuDoubleComplex *) &beta_p[0], | ||||
| 				  (cuDoubleComplex **)&Cmn[0], ldc, | ||||
| 				  batchCount); | ||||
|     assert(err==CUBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|       int64_t m64=m; | ||||
|       int64_t n64=n; | ||||
|       int64_t k64=k; | ||||
|       int64_t lda64=lda; | ||||
|       int64_t ldb64=ldb; | ||||
|       int64_t ldc64=ldc; | ||||
|       int64_t batchCount64=batchCount; | ||||
|  | ||||
|       oneapi::mkl::transpose iOpA; | ||||
|       oneapi::mkl::transpose iOpB; | ||||
|        | ||||
|       if ( OpA == GridBLAS_OP_N ) iOpA = oneapi::mkl::transpose::N; | ||||
|       if ( OpA == GridBLAS_OP_T ) iOpA = oneapi::mkl::transpose::T; | ||||
|       if ( OpA == GridBLAS_OP_C ) iOpA = oneapi::mkl::transpose::C; | ||||
|       if ( OpB == GridBLAS_OP_N ) iOpB = oneapi::mkl::transpose::N; | ||||
|       if ( OpB == GridBLAS_OP_T ) iOpB = oneapi::mkl::transpose::T; | ||||
|       if ( OpB == GridBLAS_OP_C ) iOpB = oneapi::mkl::transpose::C; | ||||
|  | ||||
|       oneapi::mkl::blas::column_major::gemm_batch(*gridblasHandle, | ||||
| 						  &iOpA, | ||||
| 						  &iOpB, | ||||
| 						  &m64,&n64,&k64, | ||||
| 						  (ComplexD *) &alpha_p[0], | ||||
| 						  (const ComplexD **)&Amk[0], (const int64_t *)&lda64, | ||||
| 						  (const ComplexD **)&Bkn[0], (const int64_t *)&ldb64, | ||||
| 						  (ComplexD *) &beta_p[0], | ||||
| 						  (ComplexD **)&Cmn[0], (const int64_t *)&ldc64, | ||||
| 						  (int64_t)1,&batchCount64,std::vector<sycl::event>()); | ||||
|       synchronise(); | ||||
| #if 0 | ||||
|       // This code was used to check the mat mul on Sunspot/OneMKL | ||||
|       std::cerr << " Called SYCL batched ZGEMM OpA "<< OpA << " OpB "<<OpB <<std::endl; | ||||
|       std::vector<ComplexD> A(m*k);  // pointer list to matrices | ||||
|       std::vector<ComplexD> B(k*n); | ||||
|       std::vector<ComplexD> C(m*n); | ||||
|       //      int sda = lda*k; | ||||
|       //      int sdb = ldb*k; | ||||
|       //      int sdc = ldc*n; | ||||
|       std::cerr << " Checking the GEMM results "<<std::endl; | ||||
|       for (int p = 0; p < 1; ++p) { | ||||
| 	ComplexD * Amk_p;  // pointer list to matrices | ||||
| 	ComplexD * Bkn_p;  // pointer list to matrices | ||||
| 	ComplexD * Cmn_p;  // pointer list to matrices | ||||
| 	acceleratorCopyFromDevice((void *)&Amk[p],(void *)&Amk_p,sizeof(ComplexD*)); | ||||
| 	acceleratorCopyFromDevice((void *)&Bkn[p],(void *)&Bkn_p,sizeof(ComplexD*)); | ||||
| 	acceleratorCopyFromDevice((void *)&Cmn[p],(void *)&Cmn_p,sizeof(ComplexD*)); | ||||
| 	std::cerr << " p " << p << " copied pointers "<<std::endl; | ||||
| 	acceleratorCopyFromDevice((void *)Amk_p,(void *)&A[0],m*k*sizeof(ComplexD)); | ||||
| 	acceleratorCopyFromDevice((void *)Bkn_p,(void *)&B[0],k*n*sizeof(ComplexD)); | ||||
| 	acceleratorCopyFromDevice((void *)Cmn_p,(void *)&C[0],m*n*sizeof(ComplexD)); | ||||
| 	std::cerr << " p " << p << " copied matrices "<<std::endl; | ||||
| 	std::cerr << " C[0] "<<C[0]<<std::endl; | ||||
| 	std::cerr << " A[0] "<<A[0]<<std::endl; | ||||
| 	std::cerr << " B[0] "<<B[0]<<std::endl; | ||||
| 	std::cerr << " m "<<m<<std::endl; | ||||
| 	std::cerr << " n "<<n<<std::endl; | ||||
| 	std::cerr << " k "<<k<<std::endl; | ||||
| 	for (int mm = 0; mm < m; ++mm) { | ||||
| 	  for (int nn = 0; nn < n; ++nn) { | ||||
| 	    ComplexD c_mn(0.0); | ||||
| 	    for (int kk = 0; kk < k; ++kk) { | ||||
| 	      int idx_a, idx_b; | ||||
| 	      //    int lda = m; // m x k column major | ||||
| 	      //    int ldb = k; // k x n column major | ||||
| 	      //    int ldc = m; // m x b column major | ||||
| 	      if(OpA!=GridBLAS_OP_N) { | ||||
| 		idx_a =kk + mm*lda; | ||||
| 	      } else { | ||||
| 		idx_a =mm + kk*lda; | ||||
| 	      } | ||||
| 	      if(OpB!=GridBLAS_OP_N) { | ||||
| 		idx_b =nn + kk*ldb; | ||||
| 	      } else { | ||||
| 		idx_b =kk + nn*ldb; | ||||
| 	      } | ||||
| 	      //	      std::cerr << " idx_a "<<idx_a<<" idx_b "<<idx_b<<std::endl; | ||||
|  | ||||
| 	      ComplexD Ac = A[idx_a]; | ||||
| 	      ComplexD Bc = B[idx_b]; | ||||
| 	      if(OpA==GridBLAS_OP_C) Ac = conjugate(Ac); | ||||
| 	      if(OpB==GridBLAS_OP_C) Bc = conjugate(Bc); | ||||
| 	       | ||||
| 	      c_mn += Ac*Bc; | ||||
| 	    } | ||||
| 	    std::cerr << " beta "<<beta<<" alpha "<<alpha<<" C_"<<mm<<","<<nn<<" "<<c_mn<<" "<<C[mm + nn*ldc]<<std::endl; | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
| #endif | ||||
| #endif | ||||
| #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) | ||||
|     // Need a default/reference implementation; use Eigen | ||||
|       if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn ; | ||||
|         }); | ||||
|       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_C) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_C) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ; | ||||
| 	  } ); | ||||
|       } else {  | ||||
| 	assert(0); | ||||
|       } | ||||
| #endif | ||||
|      RealD t1=usecond(); | ||||
|      RealD flops = 8.0*m*n*k*batchCount; | ||||
|      RealD bytes = 1.0*sizeof(ComplexD)*(m*k+k*n+m*n)*batchCount; | ||||
|      //     std::cout <<GridLogMessage<< " batched Blas copy "<<(t0-t2)/1.e3 <<" ms "<<std::endl; | ||||
|      //     std::cout <<GridLogMessage<< " batched Blas zGemm call "<<m<<","<<n<<","<<k<<" "<< flops/(t1-t0)/1.e3 <<" GF/s "<<(t1-t0)/1.e3<<" ms "<<std::endl; | ||||
|      //     std::cout <<GridLogMessage<< " batched Blas zGemm call "<<m<<","<<n<<","<<k<<" "<< bytes/(t1-t0)/1.e3 <<" GB/s "<<(t1-t0)/1.e3<<" ms "<<std::endl; | ||||
|   } | ||||
|  | ||||
|   void gemmBatched(GridBLASOperation_t OpA, | ||||
| 		   GridBLASOperation_t OpB, | ||||
| 		   int m,int n, int k, | ||||
| 		   ComplexF alpha, | ||||
| 		   deviceVector<ComplexF*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<ComplexF*> &Bkn, | ||||
| 		   ComplexF beta, | ||||
| 		   deviceVector<ComplexF*> &Cmn) | ||||
|   { | ||||
|     RealD t2=usecond(); | ||||
|     int32_t batchCount = Amk.size(); | ||||
|  | ||||
|     assert(OpA!=GridBLAS_OP_T); // Complex case expect no transpose | ||||
|     assert(OpB!=GridBLAS_OP_T); | ||||
|  | ||||
|     int lda = m; // m x k column major | ||||
|     int ldb = k; // k x n column major | ||||
|     int ldc = m; // m x b column major | ||||
|     if(OpA!=GridBLAS_OP_N) | ||||
|       lda = k; | ||||
|     if(OpB!=GridBLAS_OP_N) | ||||
|       ldb = n; | ||||
|     static deviceVector<ComplexF> alpha_p(1); | ||||
|     static deviceVector<ComplexF> beta_p(1); | ||||
|     // can prestore the 1 and the zero on device | ||||
|     acceleratorCopyToDevice((void *)&alpha,(void *)&alpha_p[0],sizeof(ComplexF)); | ||||
|     acceleratorCopyToDevice((void *)&beta ,(void *)&beta_p[0],sizeof(ComplexF)); | ||||
|     RealD t0=usecond(); | ||||
|  | ||||
|     assert(Bkn.size()==batchCount); | ||||
|     assert(Cmn.size()==batchCount); | ||||
| #ifdef GRID_HIP | ||||
|     hipblasOperation_t hOpA; | ||||
|     hipblasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = HIPBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = HIPBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = HIPBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = HIPBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = HIPBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = HIPBLAS_OP_C; | ||||
|     auto err = hipblasCgemmBatched(gridblasHandle, | ||||
| 				   hOpA, | ||||
| 				   hOpB, | ||||
| 				   m,n,k, | ||||
| 				   (hipblasComplex *) &alpha_p[0], | ||||
| 				   (hipblasComplex **)&Amk[0], lda, | ||||
| 				   (hipblasComplex **)&Bkn[0], ldb, | ||||
| 				   (hipblasComplex *) &beta_p[0], | ||||
| 				   (hipblasComplex **)&Cmn[0], ldc, | ||||
| 				   batchCount); | ||||
|  | ||||
|     assert(err==HIPBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     cublasOperation_t hOpA; | ||||
|     cublasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = CUBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = CUBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = CUBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = CUBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = CUBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = CUBLAS_OP_C; | ||||
|     auto err = cublasCgemmBatched(gridblasHandle, | ||||
| 				  hOpA, | ||||
| 				  hOpB, | ||||
| 				  m,n,k, | ||||
| 				  (cuComplex *) &alpha_p[0], | ||||
| 				  (cuComplex **)&Amk[0], lda, | ||||
| 				  (cuComplex **)&Bkn[0], ldb, | ||||
| 				  (cuComplex *) &beta_p[0], | ||||
| 				  (cuComplex **)&Cmn[0], ldc, | ||||
| 				  batchCount); | ||||
|     assert(err==CUBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|       int64_t m64=m; | ||||
|       int64_t n64=n; | ||||
|       int64_t k64=k; | ||||
|       int64_t lda64=lda; | ||||
|       int64_t ldb64=ldb; | ||||
|       int64_t ldc64=ldc; | ||||
|       int64_t batchCount64=batchCount; | ||||
|  | ||||
|       oneapi::mkl::transpose iOpA; | ||||
|       oneapi::mkl::transpose iOpB; | ||||
|        | ||||
|       if ( OpA == GridBLAS_OP_N ) iOpA = oneapi::mkl::transpose::N; | ||||
|       if ( OpA == GridBLAS_OP_T ) iOpA = oneapi::mkl::transpose::T; | ||||
|       if ( OpA == GridBLAS_OP_C ) iOpA = oneapi::mkl::transpose::C; | ||||
|       if ( OpB == GridBLAS_OP_N ) iOpB = oneapi::mkl::transpose::N; | ||||
|       if ( OpB == GridBLAS_OP_T ) iOpB = oneapi::mkl::transpose::T; | ||||
|       if ( OpB == GridBLAS_OP_C ) iOpB = oneapi::mkl::transpose::C; | ||||
|  | ||||
|       oneapi::mkl::blas::column_major::gemm_batch(*gridblasHandle, | ||||
| 						  &iOpA, | ||||
| 						  &iOpB, | ||||
| 						  &m64,&n64,&k64, | ||||
| 						  (ComplexF *) &alpha_p[0], | ||||
| 						  (const ComplexF **)&Amk[0], (const int64_t *)&lda64, | ||||
| 						  (const ComplexF **)&Bkn[0], (const int64_t *)&ldb64, | ||||
| 						  (ComplexF *) &beta_p[0], | ||||
| 						  (ComplexF **)&Cmn[0], (const int64_t *)&ldc64, | ||||
| 						  (int64_t)1,&batchCount64,std::vector<sycl::event>()); | ||||
|     synchronise(); | ||||
| #endif | ||||
| #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) | ||||
|     // Need a default/reference implementation; use Eigen | ||||
|       if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_C) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn.adjoint() ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_C ) && (OpB == GridBLAS_OP_C) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXcf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.adjoint() * eBkn.adjoint() ; | ||||
| 	  } ); | ||||
|       } else {  | ||||
| 	assert(0); | ||||
|       } | ||||
| #endif | ||||
|      RealD t1=usecond(); | ||||
|      RealD flops = 8.0*m*n*k*batchCount; | ||||
|      RealD bytes = 1.0*sizeof(ComplexF)*(m*k+k*n+m*n)*batchCount; | ||||
|   } | ||||
|    | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   // Single precision real GEMM | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
|   void gemmBatched(GridBLASOperation_t OpA, | ||||
| 		   GridBLASOperation_t OpB, | ||||
| 		   int m,int n, int k, | ||||
| 		   RealF alpha, | ||||
| 		   deviceVector<RealF*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<RealF*> &Bkn, | ||||
| 		   RealF beta, | ||||
| 		   deviceVector<RealF*> &Cmn) | ||||
|   { | ||||
|     RealD t2=usecond(); | ||||
|     int32_t batchCount = Amk.size(); | ||||
|  | ||||
|     assert(OpA!=GridBLAS_OP_C); // Real case no conjugate | ||||
|     assert(OpB!=GridBLAS_OP_C); | ||||
|  | ||||
|     int lda = m; // m x k column major | ||||
|     int ldb = k; // k x n column major | ||||
|     int ldc = m; // m x b column major | ||||
|     if(OpA!=GridBLAS_OP_N) | ||||
|       lda = k; | ||||
|     if(OpB!=GridBLAS_OP_N) | ||||
|       ldb = n; | ||||
|     static deviceVector<RealF> alpha_p(1); | ||||
|     static deviceVector<RealF> beta_p(1); | ||||
|     // can prestore the 1 and the zero on device | ||||
|     acceleratorCopyToDevice((void *)&alpha,(void *)&alpha_p[0],sizeof(RealF)); | ||||
|     acceleratorCopyToDevice((void *)&beta ,(void *)&beta_p[0],sizeof(RealF)); | ||||
|     RealD t0=usecond(); | ||||
|  | ||||
|     assert(Bkn.size()==batchCount); | ||||
|     assert(Cmn.size()==batchCount); | ||||
| #ifdef GRID_HIP | ||||
|     hipblasOperation_t hOpA; | ||||
|     hipblasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = HIPBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = HIPBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = HIPBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = HIPBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = HIPBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = HIPBLAS_OP_C; | ||||
|     auto err = hipblasSgemmBatched(gridblasHandle, | ||||
| 				   hOpA, | ||||
| 				   hOpB, | ||||
| 				   m,n,k, | ||||
| 				   (float *) &alpha_p[0], | ||||
| 				   (float **)&Amk[0], lda, | ||||
| 				   (float **)&Bkn[0], ldb, | ||||
| 				   (float *) &beta_p[0], | ||||
| 				   (float **)&Cmn[0], ldc, | ||||
| 				   batchCount); | ||||
|     assert(err==HIPBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     cublasOperation_t hOpA; | ||||
|     cublasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = CUBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = CUBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = CUBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = CUBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = CUBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = CUBLAS_OP_C; | ||||
|     auto err = cublasSgemmBatched(gridblasHandle, | ||||
| 				  hOpA, | ||||
| 				  hOpB, | ||||
| 				  m,n,k, | ||||
| 				  (float *) &alpha_p[0], | ||||
| 				  (float **)&Amk[0], lda, | ||||
| 				  (float **)&Bkn[0], ldb, | ||||
| 				  (float *) &beta_p[0], | ||||
| 				  (float **)&Cmn[0], ldc, | ||||
| 				  batchCount); | ||||
|     assert(err==CUBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|       int64_t m64=m; | ||||
|       int64_t n64=n; | ||||
|       int64_t k64=k; | ||||
|       int64_t lda64=lda; | ||||
|       int64_t ldb64=ldb; | ||||
|       int64_t ldc64=ldc; | ||||
|       int64_t batchCount64=batchCount; | ||||
|  | ||||
|       oneapi::mkl::transpose iOpA; | ||||
|       oneapi::mkl::transpose iOpB; | ||||
|        | ||||
|       if ( OpA == GridBLAS_OP_N ) iOpA = oneapi::mkl::transpose::N; | ||||
|       if ( OpA == GridBLAS_OP_T ) iOpA = oneapi::mkl::transpose::T; | ||||
|       if ( OpA == GridBLAS_OP_C ) iOpA = oneapi::mkl::transpose::C; | ||||
|       if ( OpB == GridBLAS_OP_N ) iOpB = oneapi::mkl::transpose::N; | ||||
|       if ( OpB == GridBLAS_OP_T ) iOpB = oneapi::mkl::transpose::T; | ||||
|       if ( OpB == GridBLAS_OP_C ) iOpB = oneapi::mkl::transpose::C; | ||||
|  | ||||
|       oneapi::mkl::blas::column_major::gemm_batch(*gridblasHandle, | ||||
| 						  &iOpA, | ||||
| 						  &iOpB, | ||||
| 						  &m64,&n64,&k64, | ||||
| 						  (float *) &alpha_p[0], | ||||
| 						  (const float **)&Amk[0], (const int64_t *)&lda64, | ||||
| 						  (const float **)&Bkn[0], (const int64_t *)&ldb64, | ||||
| 						  (float *) &beta_p[0], | ||||
| 						  (float **)&Cmn[0], (const int64_t *)&ldc64, | ||||
| 						  (int64_t)1,&batchCount64,std::vector<sycl::event>()); | ||||
|       synchronise(); | ||||
| #endif | ||||
| #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) | ||||
|     // Need a default/reference implementation; use Eigen | ||||
|       if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXf> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ; | ||||
| 	  } ); | ||||
|       } else {  | ||||
| 	assert(0); | ||||
|       } | ||||
| #endif | ||||
|      RealD t1=usecond(); | ||||
|      RealD flops = 2.0*m*n*k*batchCount; | ||||
|      RealD bytes = 1.0*sizeof(RealF)*(m*k+k*n+m*n)*batchCount; | ||||
|   } | ||||
|    | ||||
|    | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   // Double precision real GEMM | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   void gemmBatched(GridBLASOperation_t OpA, | ||||
| 		   GridBLASOperation_t OpB, | ||||
| 		   int m,int n, int k, | ||||
| 		   RealD alpha, | ||||
| 		   deviceVector<RealD*> &Amk,  // pointer list to matrices | ||||
| 		   deviceVector<RealD*> &Bkn, | ||||
| 		   RealD beta, | ||||
| 		   deviceVector<RealD*> &Cmn) | ||||
|   { | ||||
|     RealD t2=usecond(); | ||||
|     int32_t batchCount = Amk.size(); | ||||
|  | ||||
|     assert(OpA!=GridBLAS_OP_C); // Real case no conjugate | ||||
|     assert(OpB!=GridBLAS_OP_C); | ||||
|  | ||||
|     int lda = m; // m x k column major | ||||
|     int ldb = k; // k x n column major | ||||
|     int ldc = m; // m x b column major | ||||
|     if(OpA!=GridBLAS_OP_N) | ||||
|       lda = k; | ||||
|     if(OpB!=GridBLAS_OP_N) | ||||
|       ldb = n; | ||||
|      | ||||
|     static deviceVector<RealD> alpha_p(1); | ||||
|     static deviceVector<RealD> beta_p(1); | ||||
|     // can prestore the 1 and the zero on device | ||||
|     acceleratorCopyToDevice((void *)&alpha,(void *)&alpha_p[0],sizeof(RealD)); | ||||
|     acceleratorCopyToDevice((void *)&beta ,(void *)&beta_p[0],sizeof(RealD)); | ||||
|     RealD t0=usecond(); | ||||
|  | ||||
|     assert(Bkn.size()==batchCount); | ||||
|     assert(Cmn.size()==batchCount); | ||||
| #ifdef GRID_HIP | ||||
|     hipblasOperation_t hOpA; | ||||
|     hipblasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = HIPBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = HIPBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = HIPBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = HIPBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = HIPBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = HIPBLAS_OP_C; | ||||
|     auto err = hipblasDgemmBatched(gridblasHandle, | ||||
| 				   HIPBLAS_OP_N, | ||||
| 				   HIPBLAS_OP_N, | ||||
| 				   m,n,k, | ||||
| 				   (double *) &alpha_p[0], | ||||
| 				   (double **)&Amk[0], lda, | ||||
| 				   (double **)&Bkn[0], ldb, | ||||
| 				   (double *) &beta_p[0], | ||||
| 				   (double **)&Cmn[0], ldc, | ||||
| 				   batchCount); | ||||
|     assert(err==HIPBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_CUDA | ||||
|     cublasOperation_t hOpA; | ||||
|     cublasOperation_t hOpB; | ||||
|     if ( OpA == GridBLAS_OP_N ) hOpA = CUBLAS_OP_N; | ||||
|     if ( OpA == GridBLAS_OP_T ) hOpA = CUBLAS_OP_T; | ||||
|     if ( OpA == GridBLAS_OP_C ) hOpA = CUBLAS_OP_C; | ||||
|     if ( OpB == GridBLAS_OP_N ) hOpB = CUBLAS_OP_N; | ||||
|     if ( OpB == GridBLAS_OP_T ) hOpB = CUBLAS_OP_T; | ||||
|     if ( OpB == GridBLAS_OP_C ) hOpB = CUBLAS_OP_C; | ||||
|     auto err = cublasDgemmBatched(gridblasHandle, | ||||
| 				  hOpA, | ||||
| 				  hOpB, | ||||
| 				  m,n,k, | ||||
| 				  (double *) &alpha_p[0], | ||||
| 				  (double **)&Amk[0], lda, | ||||
| 				  (double **)&Bkn[0], ldb, | ||||
| 				  (double *) &beta_p[0], | ||||
| 				  (double **)&Cmn[0], ldc, | ||||
| 				  batchCount); | ||||
|     assert(err==CUBLAS_STATUS_SUCCESS); | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|       int64_t m64=m; | ||||
|       int64_t n64=n; | ||||
|       int64_t k64=k; | ||||
|       int64_t lda64=lda; | ||||
|       int64_t ldb64=ldb; | ||||
|       int64_t ldc64=ldc; | ||||
|       int64_t batchCount64=batchCount; | ||||
|  | ||||
|       oneapi::mkl::transpose iOpA; | ||||
|       oneapi::mkl::transpose iOpB; | ||||
|        | ||||
|       if ( OpA == GridBLAS_OP_N ) iOpA = oneapi::mkl::transpose::N; | ||||
|       if ( OpA == GridBLAS_OP_T ) iOpA = oneapi::mkl::transpose::T; | ||||
|       if ( OpA == GridBLAS_OP_C ) iOpA = oneapi::mkl::transpose::C; | ||||
|       if ( OpB == GridBLAS_OP_N ) iOpB = oneapi::mkl::transpose::N; | ||||
|       if ( OpB == GridBLAS_OP_T ) iOpB = oneapi::mkl::transpose::T; | ||||
|       if ( OpB == GridBLAS_OP_C ) iOpB = oneapi::mkl::transpose::C; | ||||
|  | ||||
|       oneapi::mkl::blas::column_major::gemm_batch(*gridblasHandle, | ||||
| 						  &iOpA, | ||||
| 						  &iOpB, | ||||
| 						  &m64,&n64,&k64, | ||||
| 						  (double *) &alpha_p[0], | ||||
| 						  (const double **)&Amk[0], (const int64_t *)&lda64, | ||||
| 						  (const double **)&Bkn[0], (const int64_t *)&ldb64, | ||||
| 						  (double *) &beta_p[0], | ||||
| 						  (double **)&Cmn[0], (const int64_t *)&ldc64, | ||||
| 						  (int64_t)1,&batchCount64,std::vector<sycl::event>()); | ||||
|       synchronise(); | ||||
| #endif | ||||
| #if !defined(GRID_SYCL) && !defined(GRID_CUDA) && !defined(GRID_HIP) | ||||
|     // Need a default/reference implementation; use Eigen | ||||
|       if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_N) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],k,n); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_N ) && (OpB == GridBLAS_OP_T) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],m,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk * eBkn.transpose() ; | ||||
| 	  }); | ||||
|       } else if ( (OpA == GridBLAS_OP_T ) && (OpB == GridBLAS_OP_T) ) { | ||||
| 	thread_for (p, batchCount, { | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eAmk(Amk[p],k,m); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eBkn(Bkn[p],n,k); | ||||
| 	  Eigen::Map<Eigen::MatrixXd> eCmn(Cmn[p],m,n); | ||||
| 	  eCmn = beta * eCmn + alpha * eAmk.transpose() * eBkn.transpose() ; | ||||
| 	  }); | ||||
|       } else {  | ||||
| 	assert(0); | ||||
|       } | ||||
| #endif | ||||
|      RealD t1=usecond(); | ||||
|      RealD flops = 2.0*m*n*k*batchCount; | ||||
|      RealD bytes = 1.0*sizeof(RealD)*(m*k+k*n+m*n)*batchCount; | ||||
|   } | ||||
|  | ||||
|   template<class CComplex> | ||||
|   double benchmark(int M, int N, int K, int BATCH) | ||||
|   { | ||||
|     int32_t N_A = M*K*BATCH; | ||||
|     int32_t N_B = K*N*BATCH; | ||||
|     int32_t N_C = M*N*BATCH; | ||||
|     deviceVector<CComplex> A(N_A); acceleratorMemSet(&A[0],0,N_A*sizeof(CComplex)); | ||||
|     deviceVector<CComplex> B(N_B); acceleratorMemSet(&B[0],0,N_B*sizeof(CComplex)); | ||||
|     deviceVector<CComplex> C(N_C); acceleratorMemSet(&C[0],0,N_C*sizeof(CComplex)); | ||||
|     CComplex alpha(1.0); | ||||
|     CComplex beta (1.0); | ||||
|     RealD flops = 8.0*M*N*K*BATCH; | ||||
|     int ncall=1000; | ||||
|     deviceVector<CComplex *> As(BATCH); | ||||
|     deviceVector<CComplex *> Bs(BATCH); | ||||
|     deviceVector<CComplex *> Cs(BATCH); | ||||
|     for(int b = 0 ; b < BATCH;b++) { | ||||
|       CComplex *ptr; | ||||
|       ptr = &A[b*M*K];      acceleratorPut(As[b],ptr); | ||||
|       ptr = &B[b*K*N];      acceleratorPut(Bs[b],ptr); | ||||
|       ptr = &C[b*M*N];      acceleratorPut(Cs[b],ptr); | ||||
|     } | ||||
|  | ||||
|     // Warm up call | ||||
|     gemmBatched(M,N,K, | ||||
| 		alpha, | ||||
| 		As, // m x k  | ||||
| 		Bs, // k x n | ||||
| 		beta,  | ||||
| 		Cs); | ||||
|     synchronise(); | ||||
|  | ||||
|     RealD t0 = usecond(); | ||||
|     for(int i=0;i<ncall;i++){ | ||||
|       gemmBatched(M,N,K, | ||||
| 		  alpha, | ||||
| 		  As, // m x k  | ||||
| 		  Bs, // k x n | ||||
| 		  beta,  | ||||
| 		  Cs); | ||||
|       synchronise(); | ||||
|     } | ||||
|     RealD t1 = usecond(); | ||||
|     RealD bytes = 1.0*sizeof(CComplex)*(M*N*2+N*K+M*K)*BATCH; | ||||
|     flops = 8.0*M*N*K*BATCH*ncall; | ||||
|     flops = flops/(t1-t0)/1.e3; | ||||
|     return flops; // Returns gigaflops | ||||
|   } | ||||
|  | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										157
									
								
								Grid/algorithms/deflation/Deflation.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										157
									
								
								Grid/algorithms/deflation/Deflation.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,157 @@ | ||||
|     /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ImplicitlyRestartedLanczos.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #ifndef GRID_DEFLATION_H | ||||
| #define GRID_DEFLATION_H | ||||
|  | ||||
| namespace Grid {  | ||||
|  | ||||
| template<class Field> | ||||
| class ZeroGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|     virtual void operator()(const Field &src, Field &guess) { guess = Zero(); }; | ||||
| }; | ||||
| template<class Field> | ||||
| class DoNothingGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field &guess) {  }; | ||||
| }; | ||||
| template<class Field> | ||||
| class SourceGuesser: public LinearFunction<Field> { | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   virtual void operator()(const Field &src, Field &guess) { guess = src; }; | ||||
| }; | ||||
|  | ||||
| //////////////////////////////// | ||||
| // Fine grid deflation | ||||
| //////////////////////////////// | ||||
| template<class Field> | ||||
| class DeflatedGuesser: public LinearFunction<Field> { | ||||
| private: | ||||
|   const std::vector<Field> &evec; | ||||
|   const std::vector<RealD> &eval; | ||||
|   const unsigned int       N; | ||||
|  | ||||
| public: | ||||
|   using LinearFunction<Field>::operator(); | ||||
|  | ||||
|   DeflatedGuesser(const std::vector<Field> & _evec,const std::vector<RealD> & _eval) | ||||
|   : DeflatedGuesser(_evec, _eval, _evec.size()) | ||||
|   {} | ||||
|  | ||||
|   DeflatedGuesser(const std::vector<Field> & _evec, const std::vector<RealD> & _eval, const unsigned int _N) | ||||
|   : evec(_evec), eval(_eval), N(_N) | ||||
|   { | ||||
|     assert(evec.size()==eval.size()); | ||||
|     assert(N <= evec.size()); | ||||
|   }  | ||||
|  | ||||
|   virtual void operator()(const Field &src,Field &guess) { | ||||
|     guess = Zero(); | ||||
|     for (int i=0;i<N;i++) { | ||||
|       const Field& tmp = evec[i]; | ||||
|       axpy(guess,TensorRemove(innerProduct(tmp,src)) / eval[i],tmp,guess); | ||||
|     } | ||||
|     guess.Checkerboard() = src.Checkerboard(); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class FineField, class CoarseField> | ||||
| class LocalCoherenceDeflatedGuesser: public LinearFunction<FineField> { | ||||
| private: | ||||
|   const std::vector<FineField>   &subspace; | ||||
|   const std::vector<CoarseField> &evec_coarse; | ||||
|   const std::vector<RealD>       &eval_coarse; | ||||
| public: | ||||
|    | ||||
|   using LinearFunction<FineField>::operator(); | ||||
|   LocalCoherenceDeflatedGuesser(const std::vector<FineField>   &_subspace, | ||||
| 				const std::vector<CoarseField> &_evec_coarse, | ||||
| 				const std::vector<RealD>       &_eval_coarse) | ||||
|     : subspace(_subspace),  | ||||
|       evec_coarse(_evec_coarse),  | ||||
|       eval_coarse(_eval_coarse)   | ||||
|   { | ||||
|   } | ||||
|    | ||||
|   void operator()(const FineField &src,FineField &guess) {  | ||||
|     int N = (int)evec_coarse.size(); | ||||
|     CoarseField src_coarse(evec_coarse[0].Grid()); | ||||
|     CoarseField guess_coarse(evec_coarse[0].Grid());    guess_coarse = Zero(); | ||||
|     blockProject(src_coarse,src,subspace);     | ||||
|     for (int i=0;i<N;i++) { | ||||
|       const CoarseField & tmp = evec_coarse[i]; | ||||
|       axpy(guess_coarse,TensorRemove(innerProduct(tmp,src_coarse)) / eval_coarse[i],tmp,guess_coarse); | ||||
|     } | ||||
|     blockPromote(guess_coarse,guess,subspace); | ||||
|     guess.Checkerboard() = src.Checkerboard(); | ||||
|   }; | ||||
|  | ||||
|   void operator()(const std::vector<FineField> &src,std::vector<FineField> &guess) { | ||||
|     int Nevec = (int)evec_coarse.size(); | ||||
|     int Nsrc = (int)src.size(); | ||||
|     // make temp variables | ||||
|     std::vector<CoarseField> src_coarse(Nsrc,evec_coarse[0].Grid()); | ||||
|     std::vector<CoarseField> guess_coarse(Nsrc,evec_coarse[0].Grid());     | ||||
|     //Preporcessing | ||||
|     std::cout << GridLogMessage << "Start BlockProject for loop" << std::endl; | ||||
|     for (int j=0;j<Nsrc;j++) | ||||
|     { | ||||
|     guess_coarse[j] = Zero(); | ||||
|     std::cout << GridLogMessage << "BlockProject iter: " << j << std::endl; | ||||
|     blockProject(src_coarse[j],src[j],subspace); | ||||
|     } | ||||
|     //deflation set up for eigen vector batchsize 1 and source batch size equal number of sources | ||||
|     std::cout << GridLogMessage << "Start ProjectAccum for loop" << std::endl; | ||||
|     for (int i=0;i<Nevec;i++) | ||||
|     { | ||||
|       std::cout << GridLogMessage << "ProjectAccum Nvec: " << i << std::endl; | ||||
|       const CoarseField & tmp = evec_coarse[i]; | ||||
|       for (int j=0;j<Nsrc;j++) | ||||
|       { | ||||
|         axpy(guess_coarse[j],TensorRemove(innerProduct(tmp,src_coarse[j])) / eval_coarse[i],tmp,guess_coarse[j]); | ||||
|       } | ||||
|     } | ||||
|     //postprocessing | ||||
|     std::cout << GridLogMessage << "Start BlockPromote for loop" << std::endl; | ||||
|     for (int j=0;j<Nsrc;j++) | ||||
|     { | ||||
|     std::cout << GridLogMessage << "BlockProject iter: " << j << std::endl; | ||||
|     blockPromote(guess_coarse[j],guess[j],subspace); | ||||
|     guess[j].Checkerboard() = src[j].Checkerboard(); | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   }; | ||||
|  | ||||
|  | ||||
|  | ||||
| } | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/deflation/MultiRHSBlockCGLinalg.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										376
									
								
								Grid/algorithms/deflation/MultiRHSBlockCGLinalg.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,376 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: MultiRHSBlockCGLinalg.h | ||||
|  | ||||
|     Copyright (C) 2024 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| /* Need helper object for BLAS accelerated mrhs blockCG */ | ||||
| template<class Field> | ||||
| class MultiRHSBlockCGLinalg | ||||
| { | ||||
| public: | ||||
|  | ||||
|   typedef typename Field::scalar_type   scalar; | ||||
|   typedef typename Field::scalar_object scalar_object; | ||||
|   typedef typename Field::vector_object vector_object; | ||||
|  | ||||
|   deviceVector<scalar> BLAS_X;      // nrhs x vol -- the sources | ||||
|   deviceVector<scalar> BLAS_Y;      // nrhs x vol -- the result | ||||
|   deviceVector<scalar> BLAS_C;      // nrhs x nrhs -- the coefficients  | ||||
|   deviceVector<scalar> BLAS_Cred;   // nrhs x nrhs x oSites -- reduction buffer | ||||
|   deviceVector<scalar *> Xdip; | ||||
|   deviceVector<scalar *> Ydip; | ||||
|   deviceVector<scalar *> Cdip; | ||||
|    | ||||
|   MultiRHSBlockCGLinalg() {}; | ||||
|   ~MultiRHSBlockCGLinalg(){ Deallocate(); }; | ||||
|    | ||||
|   void Deallocate(void) | ||||
|   { | ||||
|     Xdip.resize(0); | ||||
|     Ydip.resize(0); | ||||
|     Cdip.resize(0); | ||||
|     BLAS_Cred.resize(0); | ||||
|     BLAS_C.resize(0); | ||||
|     BLAS_X.resize(0); | ||||
|     BLAS_Y.resize(0); | ||||
|   } | ||||
|   void MaddMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector<Field> &X,const std::vector<Field> &Y,RealD scale=1.0) | ||||
|   { | ||||
|     std::vector<Field> Y_copy(AP.size(),AP[0].Grid()); | ||||
|     for(int r=0;r<AP.size();r++){ | ||||
|       Y_copy[r] = Y[r]; | ||||
|     } | ||||
|     MulMatrix(AP,m,X); | ||||
|     for(int r=0;r<AP.size();r++){ | ||||
|       AP[r] = scale*AP[r]+Y_copy[r]; | ||||
|     } | ||||
|   } | ||||
|   void MulMatrix(std::vector<Field> &Y, Eigen::MatrixXcd &m , const std::vector<Field> &X) | ||||
|   { | ||||
|     typedef typename Field::scalar_type scomplex; | ||||
|     GridBase *grid; | ||||
|     uint64_t vol; | ||||
|     uint64_t words; | ||||
|  | ||||
|     int nrhs = Y.size(); | ||||
|     grid  = X[0].Grid(); | ||||
|     vol   = grid->lSites(); | ||||
|     words = sizeof(scalar_object)/sizeof(scalar); | ||||
|     int64_t vw = vol * words; | ||||
|  | ||||
|     RealD t0 = usecond(); | ||||
|     BLAS_X.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_Y.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_C.resize(nrhs * nrhs);// cost free if size doesn't change | ||||
|     RealD t1 = usecond(); | ||||
|  | ||||
|     ///////////////////////////////////////////// | ||||
|     // Copy in the multi-rhs sources | ||||
|     ///////////////////////////////////////////// | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       int64_t offset = r*vw; | ||||
|       autoView(x_v,X[r],AcceleratorRead); | ||||
|       acceleratorCopyDeviceToDevice(&x_v[0],&BLAS_X[offset],sizeof(scalar_object)*vol); | ||||
|     } | ||||
|  | ||||
|     // Assumes Eigen storage contiguous | ||||
|     acceleratorCopyToDevice(&m(0,0),&BLAS_C[0],BLAS_C.size()*sizeof(scalar)); | ||||
|      | ||||
|   /* | ||||
|    * in Fortran column major notation (cuBlas order) | ||||
|    * | ||||
|    * Xxr = [X1(x)][..][Xn(x)] | ||||
|    * Yxr = [Y1(x)][..][Ym(x)] | ||||
|    * Y = X . C | ||||
|    */ | ||||
|     deviceVector<scalar *> Xd(1); | ||||
|     deviceVector<scalar *> Yd(1); | ||||
|     deviceVector<scalar *> Cd(1); | ||||
|  | ||||
|     scalar * Xh = & BLAS_X[0]; | ||||
|     scalar * Yh = & BLAS_Y[0]; | ||||
|     scalar * Ch = & BLAS_C[0]; | ||||
|  | ||||
|     acceleratorPut(Xd[0],Xh); | ||||
|     acceleratorPut(Yd[0],Yh); | ||||
|     acceleratorPut(Cd[0],Ch); | ||||
|  | ||||
|     RealD t2 = usecond(); | ||||
|     GridBLAS BLAS; | ||||
|     ///////////////////////////////////////// | ||||
|     // Y = X*C (transpose?) | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N,  | ||||
|     		     vw,nrhs,nrhs, | ||||
| 		     scalar(1.0), | ||||
| 		     Xd, | ||||
| 		     Cd, | ||||
| 		     scalar(0.0),  // wipe out Y | ||||
| 		     Yd); | ||||
|     BLAS.synchronise(); | ||||
|     RealD t3 = usecond(); | ||||
|  | ||||
|     // Copy back Y = m X  | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       int64_t offset = r*vw; | ||||
|       autoView(y_v,Y[r],AcceleratorWrite); | ||||
|       acceleratorCopyDeviceToDevice(&BLAS_Y[offset],&y_v[0],sizeof(scalar_object)*vol); | ||||
|     }     | ||||
|     RealD t4 = usecond(); | ||||
|     std::cout << "MulMatrix alloc    took "<< t1-t0<<" us"<<std::endl; | ||||
|     std::cout << "MulMatrix preamble took "<< t2-t1<<" us"<<std::endl; | ||||
|     std::cout << "MulMatrix blas     took "<< t3-t2<<" us"<<std::endl; | ||||
|     std::cout << "MulMatrix copy     took "<< t4-t3<<" us"<<std::endl; | ||||
|     std::cout << "MulMatrix total "<< t4-t0<<" us"<<std::endl; | ||||
|   } | ||||
|    | ||||
|   void InnerProductMatrix(Eigen::MatrixXcd &m , const std::vector<Field> &X, const std::vector<Field> &Y) | ||||
|   { | ||||
| #if 0     | ||||
|     int nrhs; | ||||
|     GridBase *grid; | ||||
|     uint64_t vol; | ||||
|     uint64_t words; | ||||
|  | ||||
|     nrhs = X.size(); | ||||
|     assert(X.size()==Y.size()); | ||||
|     conformable(X[0],Y[0]); | ||||
|  | ||||
|     grid  = X[0].Grid(); | ||||
|     vol   = grid->lSites(); | ||||
|     words = sizeof(scalar_object)/sizeof(scalar); | ||||
|     int64_t vw = vol * words; | ||||
|  | ||||
|     RealD t0 = usecond(); | ||||
|     BLAS_X.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_Y.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_C.resize(nrhs * nrhs);// cost free if size doesn't change | ||||
|     RealD t1 = usecond(); | ||||
|  | ||||
|     ///////////////////////////////////////////// | ||||
|     // Copy in the multi-rhs sources | ||||
|     ///////////////////////////////////////////// | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       int64_t offset = r*vw; | ||||
|       autoView(x_v,X[r],AcceleratorRead); | ||||
|       acceleratorCopyDeviceToDevice(&x_v[0],&BLAS_X[offset],sizeof(scalar_object)*vol); | ||||
|       autoView(y_v,Y[r],AcceleratorRead); | ||||
|       acceleratorCopyDeviceToDevice(&y_v[0],&BLAS_Y[offset],sizeof(scalar_object)*vol); | ||||
|     } | ||||
|     RealD t2 = usecond(); | ||||
|  | ||||
|   /* | ||||
|    * in Fortran column major notation (cuBlas order) | ||||
|    * | ||||
|    * Xxr = [X1(x)][..][Xn(x)] | ||||
|    * | ||||
|    * Yxr = [Y1(x)][..][Ym(x)] | ||||
|    * | ||||
|    * C_rs = X^dag Y | ||||
|    */ | ||||
|     deviceVector<scalar *> Xd(1); | ||||
|     deviceVector<scalar *> Yd(1); | ||||
|     deviceVector<scalar *> Cd(1); | ||||
|  | ||||
|     scalar * Xh = & BLAS_X[0]; | ||||
|     scalar * Yh = & BLAS_Y[0]; | ||||
|     scalar * Ch = & BLAS_C[0]; | ||||
|  | ||||
|     acceleratorPut(Xd[0],Xh); | ||||
|     acceleratorPut(Yd[0],Yh); | ||||
|     acceleratorPut(Cd[0],Ch); | ||||
|  | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     RealD t3 = usecond(); | ||||
|     ///////////////////////////////////////// | ||||
|     // C_rs = X^dag Y | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_C,GridBLAS_OP_N,  | ||||
|     		     nrhs,nrhs,vw, | ||||
| 		     ComplexD(1.0), | ||||
| 		     Xd, | ||||
| 		     Yd, | ||||
| 		     ComplexD(0.0),  // wipe out C | ||||
| 		     Cd); | ||||
|     BLAS.synchronise(); | ||||
|     RealD t4 = usecond(); | ||||
|  | ||||
|     std::vector<scalar> HOST_C(BLAS_C.size());      // nrhs . nrhs -- the coefficients  | ||||
|     acceleratorCopyFromDevice(&BLAS_C[0],&HOST_C[0],BLAS_C.size()*sizeof(scalar)); | ||||
|     grid->GlobalSumVector(&HOST_C[0],nrhs*nrhs); | ||||
|  | ||||
|     RealD t5 = usecond(); | ||||
|     for(int rr=0;rr<nrhs;rr++){ | ||||
|       for(int r=0;r<nrhs;r++){ | ||||
| 	int off = r+nrhs*rr; | ||||
| 	m(r,rr)=HOST_C[off]; | ||||
|       } | ||||
|     } | ||||
|     RealD t6 = usecond(); | ||||
|     uint64_t M=nrhs; | ||||
|     uint64_t N=nrhs; | ||||
|     uint64_t K=vw; | ||||
|     RealD bytes = 1.0*sizeof(ComplexD)*(M*N*2+N*K+M*K); | ||||
|     RealD flops = 8.0*M*N*K; | ||||
|     flops = flops/(t4-t3)/1.e3; | ||||
|     bytes = bytes/(t4-t3)/1.e3; | ||||
|     std::cout << "InnerProductMatrix m,n,k "<< M<<","<<N<<","<<K<<std::endl; | ||||
|     std::cout << "InnerProductMatrix alloc t1 "<< t1-t0<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix cp    t2 "<< t2-t1<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix setup t3 "<< t3-t2<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas t4 "<< t4-t3<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas    "<< flops<<" GF/s"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas    "<< bytes<<" GB/s"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix gsum t5 "<< t5-t4<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix cp   t6 "<< t6-t5<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix took "<< t6-t0<<" us"<<std::endl; | ||||
| #else | ||||
|     int nrhs; | ||||
|     GridBase *grid; | ||||
|     uint64_t vol; | ||||
|     uint64_t words; | ||||
|  | ||||
|     nrhs = X.size(); | ||||
|     assert(X.size()==Y.size()); | ||||
|     conformable(X[0],Y[0]); | ||||
|  | ||||
|     grid  = X[0].Grid(); | ||||
|     int rd0 =  grid->_rdimensions[0] * grid->_rdimensions[1]; | ||||
|     vol   = grid->oSites()/rd0; | ||||
|     words = rd0*sizeof(vector_object)/sizeof(scalar); | ||||
|     int64_t vw = vol * words; | ||||
|     assert(vw == grid->lSites()*sizeof(scalar_object)/sizeof(scalar)); | ||||
|  | ||||
|     RealD t0 = usecond(); | ||||
|     BLAS_X.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_Y.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_Cred.resize(nrhs * nrhs * vol);// cost free if size doesn't change | ||||
|     RealD t1 = usecond(); | ||||
|  | ||||
|     ///////////////////////////////////////////// | ||||
|     // Copy in the multi-rhs sources -- layout batched BLAS ready | ||||
|     ///////////////////////////////////////////// | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       autoView(x_v,X[r],AcceleratorRead); | ||||
|       autoView(y_v,Y[r],AcceleratorRead); | ||||
|       scalar *from_x=(scalar *)&x_v[0]; | ||||
|       scalar *from_y=(scalar *)&y_v[0]; | ||||
|       scalar *BX = &BLAS_X[0]; | ||||
|       scalar *BY = &BLAS_Y[0]; | ||||
|       accelerator_for(ssw,vw,1,{ | ||||
| 	  uint64_t ss=ssw/words; | ||||
| 	  uint64_t  w=ssw%words; | ||||
| 	  uint64_t offset = w+r*words+ss*nrhs*words; // [ss][rhs][words] | ||||
| 	  BX[offset] = from_x[ssw]; | ||||
| 	  BY[offset] = from_y[ssw]; | ||||
| 	}); | ||||
|     } | ||||
|     RealD t2 = usecond(); | ||||
|  | ||||
|   /* | ||||
|    * in Fortran column major notation (cuBlas order) | ||||
|    * | ||||
|    * Xxr = [X1(x)][..][Xn(x)] | ||||
|    * | ||||
|    * Yxr = [Y1(x)][..][Ym(x)] | ||||
|    * | ||||
|    * C_rs = X^dag Y | ||||
|    */ | ||||
|     Xdip.resize(vol); | ||||
|     Ydip.resize(vol); | ||||
|     Cdip.resize(vol); | ||||
|     std::vector<scalar *> Xh(vol); | ||||
|     std::vector<scalar *> Yh(vol); | ||||
|     std::vector<scalar *> Ch(vol); | ||||
|     for(uint64_t ss=0;ss<vol;ss++){ | ||||
|  | ||||
|       Xh[ss] = & BLAS_X[ss*nrhs*words]; | ||||
|       Yh[ss] = & BLAS_Y[ss*nrhs*words]; | ||||
|       Ch[ss] = & BLAS_Cred[ss*nrhs*nrhs]; | ||||
|  | ||||
|     } | ||||
|     acceleratorCopyToDevice(&Xh[0],&Xdip[0],vol*sizeof(scalar *)); | ||||
|     acceleratorCopyToDevice(&Yh[0],&Ydip[0],vol*sizeof(scalar *)); | ||||
|     acceleratorCopyToDevice(&Ch[0],&Cdip[0],vol*sizeof(scalar *)); | ||||
|      | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     RealD t3 = usecond(); | ||||
|     ///////////////////////////////////////// | ||||
|     // C_rs = X^dag Y | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_C,GridBLAS_OP_N,  | ||||
|     		     nrhs,nrhs,words, | ||||
| 		     ComplexD(1.0), | ||||
| 		     Xdip, | ||||
| 		     Ydip, | ||||
| 		     ComplexD(0.0),  // wipe out C | ||||
| 		     Cdip); | ||||
|     BLAS.synchronise(); | ||||
|     RealD t4 = usecond(); | ||||
|  | ||||
|     std::vector<scalar> HOST_C(BLAS_Cred.size());      // nrhs . nrhs -- the coefficients  | ||||
|     acceleratorCopyFromDevice(&BLAS_Cred[0],&HOST_C[0],BLAS_Cred.size()*sizeof(scalar)); | ||||
|  | ||||
|     RealD t5 = usecond(); | ||||
|     m = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|     for(int ss=0;ss<vol;ss++){ | ||||
|       Eigen::Map<Eigen::MatrixXcd> eC((std::complex<double> *)&HOST_C[ss*nrhs*nrhs],nrhs,nrhs); | ||||
|       m = m + eC; | ||||
|     } | ||||
|     RealD t6l = usecond(); | ||||
|     grid->GlobalSumVector((scalar *) &m(0,0),nrhs*nrhs); | ||||
|     RealD t6 = usecond(); | ||||
|     uint64_t M=nrhs; | ||||
|     uint64_t N=nrhs; | ||||
|     uint64_t K=vw; | ||||
|     RealD xybytes = grid->lSites()*sizeof(scalar_object); | ||||
|     RealD bytes = 1.0*sizeof(ComplexD)*(M*N*2+N*K+M*K); | ||||
|     RealD flops = 8.0*M*N*K; | ||||
|     flops = flops/(t4-t3)/1.e3; | ||||
|     bytes = bytes/(t4-t3)/1.e3; | ||||
|     xybytes = 4*xybytes/(t2-t1)/1.e3; | ||||
|     std::cout << "InnerProductMatrix m,n,k "<< M<<","<<N<<","<<K<<std::endl; | ||||
|     std::cout << "InnerProductMatrix alloc t1 "<< t1-t0<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix cp    t2 "<< t2-t1<<" us "<<xybytes<<" GB/s"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix setup t3 "<< t3-t2<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas t4 "<< t4-t3<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas    "<< flops<<" GF/s"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix blas    "<< bytes<<" GB/s"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix cp     t5 "<< t5-t4<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix lsum   t6l "<< t6l-t5<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix gsum   t6 "<< t6-t6l<<" us"<<std::endl; | ||||
|     std::cout << "InnerProductMatrix took "<< t6-t0<<" us"<<std::endl; | ||||
| #endif | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										513
									
								
								Grid/algorithms/deflation/MultiRHSBlockProject.h
									
									
									
									
									
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								Grid/algorithms/deflation/MultiRHSBlockProject.h
									
									
									
									
									
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							| @@ -0,0 +1,513 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: MultiRHSDeflation.h | ||||
|  | ||||
|     Copyright (C) 2023 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| /*  | ||||
|    MultiRHS block projection | ||||
|  | ||||
|    Import basis -> nblock x nbasis x  (block x internal)  | ||||
|    Import vector of fine lattice objects -> nblock x nrhs x (block x internal)  | ||||
|  | ||||
|    => coarse_(nrhs x nbasis )^block = via batched GEMM | ||||
|  | ||||
| //template<class vobj,class CComplex,int nbasis,class VLattice> | ||||
| //inline void blockProject(Lattice<iVector<CComplex,nbasis > > &coarseData, | ||||
| //			   const VLattice &fineData, | ||||
| //			   const VLattice &Basis) | ||||
| */ | ||||
|  | ||||
| template<class Field> | ||||
| class MultiRHSBlockProject | ||||
| { | ||||
| public: | ||||
|  | ||||
|   typedef typename Field::scalar_type   scalar; | ||||
|   typedef typename Field::scalar_object scalar_object; | ||||
|   typedef Field Fermion; | ||||
|  | ||||
|   int nbasis; | ||||
|   GridBase *coarse_grid; | ||||
|   GridBase *fine_grid; | ||||
|   uint64_t block_vol; | ||||
|   uint64_t fine_vol; | ||||
|   uint64_t coarse_vol; | ||||
|   uint64_t words; | ||||
|  | ||||
|   // Row major layout "C" order: | ||||
|   // BLAS_V[coarse_vol][nbasis][block_vol][words] | ||||
|   // BLAS_F[coarse_vol][nrhs][block_vol][words] | ||||
|   // BLAS_C[coarse_vol][nrhs][nbasis] | ||||
|   /* | ||||
|    * in Fortran column major notation (cuBlas order) | ||||
|    * | ||||
|    * Vxb = [v1(x)][..][vn(x)] ... x coarse vol | ||||
|    * | ||||
|    * Fxr = [r1(x)][..][rm(x)] ... x coarse vol | ||||
|    * | ||||
|    * Block project: | ||||
|    * C_br = V^dag F x coarse vol | ||||
|    * | ||||
|    * Block promote: | ||||
|    * F_xr = Vxb Cbr x coarse_vol | ||||
|    */   | ||||
|   deviceVector<scalar> BLAS_V;      // words * block_vol * nbasis x coarse_vol  | ||||
|   deviceVector<scalar> BLAS_F;      // nrhs x fine_vol * words   -- the sources | ||||
|   deviceVector<scalar> BLAS_C;      // nrhs x coarse_vol * nbasis -- the coarse coeffs | ||||
|  | ||||
|   RealD blasNorm2(deviceVector<scalar> &blas) | ||||
|   { | ||||
|     scalar ss(0.0); | ||||
|     std::vector<scalar> tmp(blas.size()); | ||||
|     acceleratorCopyFromDevice(&blas[0],&tmp[0],blas.size()*sizeof(scalar)); | ||||
|     for(int64_t s=0;s<blas.size();s++){ | ||||
|       ss=ss+tmp[s]*adj(tmp[s]); | ||||
|     } | ||||
|     coarse_grid->GlobalSum(ss); | ||||
|     return real(ss); | ||||
|   } | ||||
|    | ||||
|   MultiRHSBlockProject(){}; | ||||
|  ~MultiRHSBlockProject(){ Deallocate(); }; | ||||
|    | ||||
|   void Deallocate(void) | ||||
|   { | ||||
|     nbasis=0; | ||||
|     coarse_grid=nullptr; | ||||
|     fine_grid=nullptr; | ||||
|     fine_vol=0; | ||||
|     block_vol=0; | ||||
|     coarse_vol=0; | ||||
|     words=0; | ||||
|     BLAS_V.resize(0); | ||||
|     BLAS_F.resize(0); | ||||
|     BLAS_C.resize(0); | ||||
|   } | ||||
|   void Allocate(int _nbasis,GridBase *_fgrid,GridBase *_cgrid) | ||||
|   { | ||||
|     nbasis=_nbasis; | ||||
|  | ||||
|     fine_grid=_fgrid; | ||||
|     coarse_grid=_cgrid; | ||||
|  | ||||
|     fine_vol   = fine_grid->lSites(); | ||||
|     coarse_vol = coarse_grid->lSites(); | ||||
|     block_vol = fine_vol/coarse_vol; | ||||
|      | ||||
|     words = sizeof(scalar_object)/sizeof(scalar); | ||||
|  | ||||
|     BLAS_V.resize (fine_vol * words * nbasis ); | ||||
|   } | ||||
|   void ImportFineGridVectors(std::vector <Field > &vecs, deviceVector<scalar> &blas) | ||||
|   { | ||||
|     int nvec = vecs.size(); | ||||
|     typedef typename Field::vector_object vobj; | ||||
|     //    std::cout << GridLogMessage <<" BlockProjector importing "<<nvec<< " fine grid vectors" <<std::endl; | ||||
|  | ||||
|     assert(vecs[0].Grid()==fine_grid); | ||||
|  | ||||
|     subdivides(coarse_grid,fine_grid); // require they map | ||||
|  | ||||
|     int _ndimension = coarse_grid->_ndimension; | ||||
|     assert(block_vol == fine_grid->oSites() / coarse_grid->oSites()); | ||||
|      | ||||
|     Coordinate  block_r      (_ndimension); | ||||
|     for(int d=0 ; d<_ndimension;d++){ | ||||
|       block_r[d] = fine_grid->_rdimensions[d] / coarse_grid->_rdimensions[d]; | ||||
|     } | ||||
|  | ||||
|     uint64_t sz = blas.size(); | ||||
|  | ||||
|     acceleratorMemSet(&blas[0],0,blas.size()*sizeof(scalar)); | ||||
|  | ||||
|     Coordinate fine_rdimensions = fine_grid->_rdimensions; | ||||
|     Coordinate coarse_rdimensions = coarse_grid->_rdimensions; | ||||
|     int64_t bv= block_vol; | ||||
|     for(int v=0;v<vecs.size();v++){ | ||||
|  | ||||
|       //      std::cout << " BlockProjector importing vector"<<v<<" "<<norm2(vecs[v])<<std::endl; | ||||
|       autoView( fineData   , vecs[v], AcceleratorRead); | ||||
|  | ||||
|       auto blasData_p  = &blas[0]; | ||||
|       auto fineData_p  = &fineData[0]; | ||||
|  | ||||
|       int64_t osites = fine_grid->oSites(); | ||||
|  | ||||
|       // loop over fine sites | ||||
|       const int Nsimd = vobj::Nsimd(); | ||||
|       //      std::cout << "sz "<<sz<<std::endl; | ||||
|       //      std::cout << "prod "<<Nsimd * coarse_grid->oSites() * block_vol * nvec * words<<std::endl; | ||||
|       assert(sz == Nsimd * coarse_grid->oSites() * block_vol * nvec * words); | ||||
|       uint64_t lwords= words; // local variable for copy in to GPU | ||||
|       accelerator_for(sf,osites,Nsimd,{ | ||||
| #ifdef GRID_SIMT | ||||
|         { | ||||
| 	  int lane=acceleratorSIMTlane(Nsimd); // buffer lane | ||||
| #else | ||||
| 	  for(int lane=0;lane<Nsimd;lane++) { | ||||
| #endif | ||||
| 	  // One thread per fine site | ||||
| 	  Coordinate coor_f(_ndimension); | ||||
| 	  Coordinate coor_b(_ndimension); | ||||
| 	  Coordinate coor_c(_ndimension); | ||||
|  | ||||
| 	  // Fine site to fine coor | ||||
| 	  Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions); | ||||
|  | ||||
| 	  for(int d=0;d<_ndimension;d++) coor_b[d] = coor_f[d]%block_r[d]; | ||||
| 	  for(int d=0;d<_ndimension;d++) coor_c[d] = coor_f[d]/block_r[d]; | ||||
| 	   | ||||
| 	  int sc;// coarse site | ||||
| 	  int sb;// block site | ||||
| 	  Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions); | ||||
| 	  Lexicographic::IndexFromCoor(coor_b,sb,block_r); | ||||
|  | ||||
|           scalar_object data = extractLane(lane,fineData[sf]); | ||||
|  | ||||
| 	  // BLAS layout address calculation | ||||
| 	  // words * block_vol * nbasis x coarse_vol | ||||
| 	  // coarse oSite x block vole x lanes | ||||
| 	  int64_t site = (lane*osites + sc*bv)*nvec | ||||
|    	               + v*bv | ||||
| 	               + sb; | ||||
|  | ||||
| 	  //	  assert(site*lwords<sz); | ||||
|  | ||||
| 	  scalar_object * ptr = (scalar_object *)&blasData_p[site*lwords]; | ||||
|  | ||||
| 	  *ptr = data; | ||||
| #ifdef GRID_SIMT | ||||
| 	} | ||||
| #else | ||||
| 	} | ||||
| #endif | ||||
|       }); | ||||
|       //      std::cout << " import fine Blas norm "<<blasNorm2(blas)<<std::endl; | ||||
|       //      std::cout << " BlockProjector imported vector"<<v<<std::endl; | ||||
|     } | ||||
|   } | ||||
|   void ExportFineGridVectors(std::vector <Field> &vecs, deviceVector<scalar> &blas) | ||||
|   { | ||||
|     typedef typename Field::vector_object vobj; | ||||
|  | ||||
|     int nvec = vecs.size(); | ||||
|  | ||||
|     assert(vecs[0].Grid()==fine_grid); | ||||
|  | ||||
|     subdivides(coarse_grid,fine_grid); // require they map | ||||
|  | ||||
|     int _ndimension = coarse_grid->_ndimension; | ||||
|     assert(block_vol == fine_grid->oSites() / coarse_grid->oSites()); | ||||
|      | ||||
|     Coordinate  block_r      (_ndimension); | ||||
|     for(int d=0 ; d<_ndimension;d++){ | ||||
|       block_r[d] = fine_grid->_rdimensions[d] / coarse_grid->_rdimensions[d]; | ||||
|     } | ||||
|     Coordinate fine_rdimensions = fine_grid->_rdimensions; | ||||
|     Coordinate coarse_rdimensions = coarse_grid->_rdimensions; | ||||
|  | ||||
|     //    std::cout << " export fine Blas norm "<<blasNorm2(blas)<<std::endl; | ||||
|  | ||||
|     int64_t bv= block_vol; | ||||
|     for(int v=0;v<vecs.size();v++){ | ||||
|  | ||||
|       autoView( fineData   , vecs[v], AcceleratorWrite); | ||||
|  | ||||
|       auto blasData_p  = &blas[0]; | ||||
|       auto fineData_p    = &fineData[0]; | ||||
|  | ||||
|       int64_t osites = fine_grid->oSites(); | ||||
|       uint64_t lwords = words; | ||||
|       //      std::cout << " Nsimd is "<<vobj::Nsimd() << std::endl; | ||||
|       //      std::cout << " lwords is "<<lwords << std::endl; | ||||
|       //      std::cout << " sizeof(scalar_object) is "<<sizeof(scalar_object) << std::endl; | ||||
|       // loop over fine sites | ||||
|       accelerator_for(sf,osites,vobj::Nsimd(),{ | ||||
|        | ||||
| #ifdef GRID_SIMT | ||||
|         { | ||||
| 	  int lane=acceleratorSIMTlane(vobj::Nsimd()); // buffer lane | ||||
| #else | ||||
| 	  for(int lane=0;lane<vobj::Nsimd();lane++) { | ||||
| #endif | ||||
| 	  // One thread per fine site | ||||
| 	  Coordinate coor_f(_ndimension); | ||||
| 	  Coordinate coor_b(_ndimension); | ||||
| 	  Coordinate coor_c(_ndimension); | ||||
|  | ||||
| 	  Lexicographic::CoorFromIndex(coor_f,sf,fine_rdimensions); | ||||
|  | ||||
| 	  for(int d=0;d<_ndimension;d++) coor_b[d] = coor_f[d]%block_r[d]; | ||||
| 	  for(int d=0;d<_ndimension;d++) coor_c[d] = coor_f[d]/block_r[d]; | ||||
| 	   | ||||
| 	  int sc; | ||||
| 	  int sb; | ||||
| 	  Lexicographic::IndexFromCoor(coor_c,sc,coarse_rdimensions); | ||||
| 	  Lexicographic::IndexFromCoor(coor_b,sb,block_r); | ||||
|  | ||||
| 	  // BLAS layout address calculation | ||||
| 	  // words * block_vol * nbasis x coarse_vol 	   | ||||
| 	  int64_t site = (lane*osites + sc*bv)*nvec | ||||
|    	               + v*bv | ||||
| 	               + sb; | ||||
|  | ||||
| 	  scalar_object * ptr = (scalar_object *)&blasData_p[site*lwords]; | ||||
|  | ||||
| 	  scalar_object data = *ptr; | ||||
|  | ||||
| 	  insertLane(lane,fineData[sf],data); | ||||
| #ifdef GRID_SIMT | ||||
| 	} | ||||
| #else | ||||
| 	} | ||||
| #endif | ||||
|       }); | ||||
|     } | ||||
|   } | ||||
|   template<class vobj> | ||||
|   void ImportCoarseGridVectors(std::vector <Lattice<vobj> > &vecs, deviceVector<scalar> &blas) | ||||
|   { | ||||
|     int nvec = vecs.size(); | ||||
|     typedef typename vobj::scalar_object coarse_scalar_object; | ||||
|  | ||||
|     //    std::cout << " BlockProjector importing "<<nvec<< " coarse grid vectors" <<std::endl; | ||||
|  | ||||
|     assert(vecs[0].Grid()==coarse_grid); | ||||
|  | ||||
|     int _ndimension = coarse_grid->_ndimension; | ||||
|  | ||||
|     uint64_t sz = blas.size(); | ||||
|  | ||||
|     Coordinate coarse_rdimensions = coarse_grid->_rdimensions; | ||||
|      | ||||
|     for(int v=0;v<vecs.size();v++){ | ||||
|  | ||||
|       //      std::cout << " BlockProjector importing coarse vector"<<v<<" "<<norm2(vecs[v])<<std::endl; | ||||
|       autoView( coarseData   , vecs[v], AcceleratorRead); | ||||
|  | ||||
|       auto blasData_p  = &blas[0]; | ||||
|       auto coarseData_p  = &coarseData[0]; | ||||
|  | ||||
|       int64_t osites = coarse_grid->oSites(); | ||||
|  | ||||
|       // loop over fine sites | ||||
|       const int Nsimd = vobj::Nsimd(); | ||||
|       uint64_t cwords=sizeof(typename vobj::scalar_object)/sizeof(scalar); | ||||
|       assert(cwords==nbasis); | ||||
|        | ||||
|       accelerator_for(sc,osites,Nsimd,{ | ||||
| #ifdef GRID_SIMT | ||||
|         { | ||||
| 	  int lane=acceleratorSIMTlane(Nsimd); // buffer lane | ||||
| #else | ||||
| 	  for(int lane=0;lane<Nsimd;lane++) { | ||||
| #endif | ||||
|            // C_br per site | ||||
| 	    int64_t blas_site = (lane*osites + sc)*nvec*cwords + v*cwords; | ||||
| 	     | ||||
| 	    coarse_scalar_object data = extractLane(lane,coarseData[sc]); | ||||
|  | ||||
| 	    coarse_scalar_object * ptr = (coarse_scalar_object *)&blasData_p[blas_site]; | ||||
|  | ||||
| 	    *ptr = data; | ||||
| #ifdef GRID_SIMT | ||||
| 	} | ||||
| #else | ||||
| 	} | ||||
| #endif | ||||
|       }); | ||||
|       //      std::cout << " import coarsee Blas norm "<<blasNorm2(blas)<<std::endl; | ||||
|     } | ||||
|   } | ||||
|   template<class vobj> | ||||
|   void ExportCoarseGridVectors(std::vector <Lattice<vobj> > &vecs, deviceVector<scalar> &blas) | ||||
|   { | ||||
|     int nvec = vecs.size(); | ||||
|     typedef typename vobj::scalar_object coarse_scalar_object; | ||||
|     //    std::cout << GridLogMessage<<" BlockProjector exporting "<<nvec<< " coarse grid vectors" <<std::endl; | ||||
|  | ||||
|     assert(vecs[0].Grid()==coarse_grid); | ||||
|  | ||||
|     int _ndimension = coarse_grid->_ndimension; | ||||
|      | ||||
|     uint64_t sz = blas.size(); | ||||
|  | ||||
|     Coordinate coarse_rdimensions = coarse_grid->_rdimensions; | ||||
|      | ||||
|     //    std::cout << " export coarsee Blas norm "<<blasNorm2(blas)<<std::endl; | ||||
|     for(int v=0;v<vecs.size();v++){ | ||||
|  | ||||
|       //  std::cout << " BlockProjector exporting coarse vector"<<v<<std::endl; | ||||
|       autoView( coarseData   , vecs[v], AcceleratorWrite); | ||||
|  | ||||
|       auto blasData_p  = &blas[0]; | ||||
|       auto coarseData_p  = &coarseData[0]; | ||||
|  | ||||
|       int64_t osites = coarse_grid->oSites(); | ||||
|  | ||||
|       // loop over fine sites | ||||
|       const int Nsimd = vobj::Nsimd(); | ||||
|       uint64_t cwords=sizeof(typename vobj::scalar_object)/sizeof(scalar); | ||||
|       assert(cwords==nbasis); | ||||
|        | ||||
|       accelerator_for(sc,osites,Nsimd,{ | ||||
| 	  // Wrap in a macro "FOR_ALL_LANES(lane,{ ... }); | ||||
| #ifdef GRID_SIMT | ||||
|         { | ||||
| 	  int lane=acceleratorSIMTlane(Nsimd); // buffer lane | ||||
| #else | ||||
| 	  for(int lane=0;lane<Nsimd;lane++) { | ||||
| #endif | ||||
| 	    int64_t blas_site = (lane*osites + sc)*nvec*cwords + v*cwords; | ||||
| 	    coarse_scalar_object * ptr = (coarse_scalar_object *)&blasData_p[blas_site]; | ||||
| 	    coarse_scalar_object data = *ptr; | ||||
| 	    insertLane(lane,coarseData[sc],data); | ||||
| #ifdef GRID_SIMT | ||||
| 	} | ||||
| #else | ||||
| 	} | ||||
| #endif | ||||
|       }); | ||||
|     } | ||||
|   } | ||||
|   void ImportBasis(std::vector < Field > &vecs) | ||||
|   { | ||||
|     //    std::cout << " BlockProjector Import basis size "<<vecs.size()<<std::endl; | ||||
|     ImportFineGridVectors(vecs,BLAS_V); | ||||
|   } | ||||
|  | ||||
|   template<class cobj> | ||||
|   void blockProject(std::vector<Field> &fine,std::vector< Lattice<cobj> > & coarse) | ||||
|   { | ||||
|     int nrhs=fine.size(); | ||||
|     int _nbasis = sizeof(typename cobj::scalar_object)/sizeof(scalar); | ||||
|     //    std::cout << "blockProject nbasis " <<nbasis<<" " << _nbasis<<std::endl; | ||||
|     assert(nbasis==_nbasis); | ||||
|      | ||||
|     BLAS_F.resize (fine_vol * words * nrhs ); | ||||
|     BLAS_C.resize (coarse_vol * nbasis * nrhs ); | ||||
|  | ||||
|     ///////////////////////////////////////////// | ||||
|     // Copy in the multi-rhs sources to same data layout | ||||
|     ///////////////////////////////////////////// | ||||
|     //    std::cout << "BlockProject import fine"<<std::endl; | ||||
|     ImportFineGridVectors(fine,BLAS_F); | ||||
|      | ||||
|     deviceVector<scalar *> Vd(coarse_vol); | ||||
|     deviceVector<scalar *> Fd(coarse_vol); | ||||
|     deviceVector<scalar *> Cd(coarse_vol); | ||||
|  | ||||
|     //    std::cout << "BlockProject pointers"<<std::endl; | ||||
|     for(int c=0;c<coarse_vol;c++){ | ||||
|       // BLAS_V[coarse_vol][nbasis][block_vol][words] | ||||
|       // BLAS_F[coarse_vol][nrhs][block_vol][words] | ||||
|       // BLAS_C[coarse_vol][nrhs][nbasis] | ||||
|       scalar * Vh = & BLAS_V[c*nbasis*block_vol*words]; | ||||
|       scalar * Fh = & BLAS_F[c*nrhs*block_vol*words]; | ||||
|       scalar * Ch = & BLAS_C[c*nrhs*nbasis]; | ||||
|  | ||||
|       acceleratorPut(Vd[c],Vh); | ||||
|       acceleratorPut(Fd[c],Fh); | ||||
|       acceleratorPut(Cd[c],Ch); | ||||
|     } | ||||
|  | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     //    std::cout << "BlockProject BLAS"<<std::endl; | ||||
|     int64_t vw = block_vol * words; | ||||
|     ///////////////////////////////////////// | ||||
|     // C_br = V^dag R | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_C,GridBLAS_OP_N,  | ||||
|     		     nbasis,nrhs,vw, | ||||
| 		     scalar(1.0), | ||||
| 		     Vd, | ||||
| 		     Fd, | ||||
| 		     scalar(0.0),  // wipe out C | ||||
| 		     Cd); | ||||
|     BLAS.synchronise(); | ||||
|     //    std::cout << "BlockProject done"<<std::endl; | ||||
|     ExportCoarseGridVectors(coarse, BLAS_C); | ||||
|     //    std::cout << "BlockProject done"<<std::endl; | ||||
|  | ||||
|   } | ||||
|  | ||||
|   template<class cobj> | ||||
|   void blockPromote(std::vector<Field> &fine,std::vector<Lattice<cobj> > & coarse) | ||||
|   { | ||||
|     int nrhs=fine.size(); | ||||
|     int _nbasis = sizeof(typename cobj::scalar_object)/sizeof(scalar); | ||||
|     assert(nbasis==_nbasis); | ||||
|      | ||||
|     BLAS_F.resize (fine_vol * words * nrhs ); | ||||
|     BLAS_C.resize (coarse_vol * nbasis * nrhs ); | ||||
|  | ||||
|     ImportCoarseGridVectors(coarse, BLAS_C); | ||||
|  | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     deviceVector<scalar *> Vd(coarse_vol); | ||||
|     deviceVector<scalar *> Fd(coarse_vol); | ||||
|     deviceVector<scalar *> Cd(coarse_vol); | ||||
|  | ||||
|     for(int c=0;c<coarse_vol;c++){ | ||||
|       // BLAS_V[coarse_vol][nbasis][block_vol][words] | ||||
|       // BLAS_F[coarse_vol][nrhs][block_vol][words] | ||||
|       // BLAS_C[coarse_vol][nrhs][nbasis] | ||||
|       scalar * Vh = & BLAS_V[c*nbasis*block_vol*words]; | ||||
|       scalar * Fh = & BLAS_F[c*nrhs*block_vol*words]; | ||||
|       scalar * Ch = & BLAS_C[c*nrhs*nbasis]; | ||||
|       acceleratorPut(Vd[c],Vh); | ||||
|       acceleratorPut(Fd[c],Fh); | ||||
|       acceleratorPut(Cd[c],Ch); | ||||
|     } | ||||
|  | ||||
|     ///////////////////////////////////////// | ||||
|     // Block promote: | ||||
|     // F_xr = Vxb Cbr (x coarse_vol) | ||||
|     ///////////////////////////////////////// | ||||
|  | ||||
|     int64_t vw = block_vol * words; | ||||
|     BLAS.gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N,  | ||||
|     		     vw,nrhs,nbasis, | ||||
| 		     scalar(1.0), | ||||
| 		     Vd, | ||||
| 		     Cd, | ||||
| 		     scalar(0.0),  // wipe out C | ||||
| 		     Fd); | ||||
|     BLAS.synchronise(); | ||||
|     //    std::cout << " blas call done"<<std::endl; | ||||
|      | ||||
|     ExportFineGridVectors(fine, BLAS_F); | ||||
|     //    std::cout << " exported "<<std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										233
									
								
								Grid/algorithms/deflation/MultiRHSDeflation.h
									
									
									
									
									
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										233
									
								
								Grid/algorithms/deflation/MultiRHSDeflation.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,233 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: MultiRHSDeflation.h | ||||
|  | ||||
|     Copyright (C) 2023 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| /* Need helper object for BLAS accelerated mrhs projection | ||||
|  | ||||
|    i) MultiRHS Deflation | ||||
|  | ||||
|    Import Evecs -> nev x vol x internal  | ||||
|    Import vector of Lattice objects -> nrhs x vol x internal | ||||
|    => Cij (nrhs x Nev) via GEMM. | ||||
|    => Guess  (nrhs x vol x internal)  = C x evecs (via GEMM) | ||||
|    Export | ||||
|  | ||||
|     | ||||
|    ii) MultiRHS block projection | ||||
|  | ||||
|    Import basis -> nblock x nbasis x  (block x internal)  | ||||
|    Import vector of fine lattice objects -> nblock x nrhs x (block x internal)  | ||||
|  | ||||
|    => coarse_(nrhs x nbasis )^block = via batched GEMM | ||||
|  | ||||
|    iii)   Alternate interface:  | ||||
|    Import higher dim Lattice object-> vol x nrhs layout | ||||
|     | ||||
| */ | ||||
| template<class Field> | ||||
| class MultiRHSDeflation | ||||
| { | ||||
| public: | ||||
|  | ||||
|   typedef typename Field::scalar_type   scalar; | ||||
|   typedef typename Field::scalar_object scalar_object; | ||||
|  | ||||
|   int nev; | ||||
|   std::vector<RealD> eval; | ||||
|   GridBase *grid; | ||||
|   uint64_t vol; | ||||
|   uint64_t words; | ||||
|    | ||||
|   deviceVector<scalar> BLAS_E;      //  nev x vol -- the eigenbasis   (up to a 1/sqrt(lambda)) | ||||
|   deviceVector<scalar> BLAS_R;      // nrhs x vol -- the sources | ||||
|   deviceVector<scalar> BLAS_G;      // nrhs x vol -- the guess | ||||
|   deviceVector<scalar> BLAS_C;      // nrhs x nev -- the coefficients  | ||||
|    | ||||
|   MultiRHSDeflation(){}; | ||||
|   ~MultiRHSDeflation(){ Deallocate(); }; | ||||
|    | ||||
|   void Deallocate(void) | ||||
|   { | ||||
|     nev=0; | ||||
|     grid=nullptr; | ||||
|     vol=0; | ||||
|     words=0; | ||||
|     BLAS_E.resize(0); | ||||
|     BLAS_R.resize(0); | ||||
|     BLAS_C.resize(0); | ||||
|     BLAS_G.resize(0); | ||||
|   } | ||||
|   void Allocate(int _nev,GridBase *_grid) | ||||
|   { | ||||
|     nev=_nev; | ||||
|     grid=_grid; | ||||
|     vol   = grid->lSites(); | ||||
|     words = sizeof(scalar_object)/sizeof(scalar); | ||||
|     eval.resize(nev); | ||||
|     BLAS_E.resize (vol * words * nev ); | ||||
|     std::cout << GridLogMessage << " Allocate for "<<nev<<" eigenvectors and volume "<<vol<<std::endl; | ||||
|   } | ||||
|   void ImportEigenVector(Field &evec,RealD &_eval, int ev) | ||||
|   { | ||||
|     //    std::cout << " ev " <<ev<<" eval "<<_eval<< std::endl; | ||||
|     assert(ev<eval.size()); | ||||
|     eval[ev] = _eval; | ||||
|  | ||||
|     int64_t offset = ev*vol*words; | ||||
|     autoView(v,evec,AcceleratorRead); | ||||
|     acceleratorCopyDeviceToDevice(&v[0],&BLAS_E[offset],sizeof(scalar_object)*vol); | ||||
|  | ||||
|   } | ||||
|   void ImportEigenBasis(std::vector<Field> &evec,std::vector<RealD> &_eval) | ||||
|   { | ||||
|     ImportEigenBasis(evec,_eval,0,evec.size()); | ||||
|   } | ||||
|   // Could use to import a batch of eigenvectors | ||||
|   void ImportEigenBasis(std::vector<Field> &evec,std::vector<RealD> &_eval, int _ev0, int _nev) | ||||
|   { | ||||
|     assert(_ev0+_nev<=evec.size()); | ||||
|  | ||||
|     Allocate(_nev,evec[0].Grid()); | ||||
|      | ||||
|     // Imports a sub-batch of eigenvectors, _ev0, ..., _ev0+_nev-1 | ||||
|     for(int e=0;e<nev;e++){ | ||||
|       std::cout << "Importing eigenvector "<<e<<" evalue "<<_eval[_ev0+e]<<std::endl; | ||||
|       ImportEigenVector(evec[_ev0+e],_eval[_ev0+e],e); | ||||
|     } | ||||
|   } | ||||
|   void DeflateSources(std::vector<Field> &source,std::vector<Field> & guess) | ||||
|   { | ||||
|     int nrhs = source.size(); | ||||
|     assert(source.size()==guess.size()); | ||||
|     assert(grid == guess[0].Grid()); | ||||
|     conformable(guess[0],source[0]); | ||||
|  | ||||
|     int64_t vw = vol * words; | ||||
|  | ||||
|     RealD t0 = usecond(); | ||||
|     BLAS_R.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_G.resize(nrhs * vw); // cost free if size doesn't change | ||||
|     BLAS_C.resize(nev * nrhs);// cost free if size doesn't change | ||||
|  | ||||
|     ///////////////////////////////////////////// | ||||
|     // Copy in the multi-rhs sources | ||||
|     ///////////////////////////////////////////// | ||||
|     //    for(int r=0;r<nrhs;r++){ | ||||
|     //      std::cout << " source["<<r<<"] = "<<norm2(source[r])<<std::endl; | ||||
|     //    } | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       int64_t offset = r*vw; | ||||
|       autoView(v,source[r],AcceleratorRead); | ||||
|       acceleratorCopyDeviceToDevice(&v[0],&BLAS_R[offset],sizeof(scalar_object)*vol); | ||||
|     } | ||||
|  | ||||
|   /* | ||||
|    * in Fortran column major notation (cuBlas order) | ||||
|    * | ||||
|    * Exe = [e1(x)][..][en(x)] | ||||
|    * | ||||
|    * Rxr = [r1(x)][..][rm(x)] | ||||
|    * | ||||
|    * C_er = E^dag R | ||||
|    * C_er = C_er / lambda_e  | ||||
|    * G_xr = Exe Cer | ||||
|    */ | ||||
|     deviceVector<scalar *> Ed(1); | ||||
|     deviceVector<scalar *> Rd(1); | ||||
|     deviceVector<scalar *> Cd(1); | ||||
|     deviceVector<scalar *> Gd(1); | ||||
|  | ||||
|     scalar * Eh = & BLAS_E[0]; | ||||
|     scalar * Rh = & BLAS_R[0]; | ||||
|     scalar * Ch = & BLAS_C[0]; | ||||
|     scalar * Gh = & BLAS_G[0]; | ||||
|  | ||||
|     acceleratorPut(Ed[0],Eh); | ||||
|     acceleratorPut(Rd[0],Rh); | ||||
|     acceleratorPut(Cd[0],Ch); | ||||
|     acceleratorPut(Gd[0],Gh); | ||||
|  | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     ///////////////////////////////////////// | ||||
|     // C_er = E^dag R | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_C,GridBLAS_OP_N,  | ||||
|     		     nev,nrhs,vw, | ||||
| 		     scalar(1.0), | ||||
| 		     Ed, | ||||
| 		     Rd, | ||||
| 		     scalar(0.0),  // wipe out C | ||||
| 		     Cd); | ||||
|     BLAS.synchronise(); | ||||
|  | ||||
|     assert(BLAS_C.size()==nev*nrhs); | ||||
|  | ||||
|     std::vector<scalar> HOST_C(BLAS_C.size());      // nrhs . nev -- the coefficients  | ||||
|     acceleratorCopyFromDevice(&BLAS_C[0],&HOST_C[0],BLAS_C.size()*sizeof(scalar)); | ||||
|     grid->GlobalSumVector(&HOST_C[0],nev*nrhs); | ||||
|     for(int e=0;e<nev;e++){ | ||||
|       RealD lam(1.0/eval[e]); | ||||
|       for(int r=0;r<nrhs;r++){ | ||||
| 	int off = e+nev*r; | ||||
| 	HOST_C[off]=HOST_C[off] * lam; | ||||
| 	//	std::cout << "C["<<e<<"]["<<r<<"] ="<<HOST_C[off]<< " eval[e] "<<eval[e] <<std::endl; | ||||
|       } | ||||
|     } | ||||
|     acceleratorCopyToDevice(&HOST_C[0],&BLAS_C[0],BLAS_C.size()*sizeof(scalar)); | ||||
|  | ||||
|      | ||||
|     ///////////////////////////////////////// | ||||
|     // Guess G_xr = Exe Cer | ||||
|     ///////////////////////////////////////// | ||||
|     BLAS.gemmBatched(GridBLAS_OP_N,GridBLAS_OP_N,  | ||||
| 		     vw,nrhs,nev, | ||||
| 		     scalar(1.0), | ||||
| 		     Ed, // x . nev | ||||
| 		     Cd, // nev . nrhs | ||||
| 		     scalar(0.0), | ||||
| 		     Gd); | ||||
|     BLAS.synchronise(); | ||||
|  | ||||
|     /////////////////////////////////////// | ||||
|     // Copy out the multirhs | ||||
|     /////////////////////////////////////// | ||||
|     for(int r=0;r<nrhs;r++){ | ||||
|       int64_t offset = r*vw; | ||||
|       autoView(v,guess[r],AcceleratorWrite); | ||||
|       acceleratorCopyDeviceToDevice(&BLAS_G[offset],&v[0],sizeof(scalar_object)*vol); | ||||
|     } | ||||
|     RealD t1 = usecond(); | ||||
|     std::cout << GridLogMessage << "MultiRHSDeflation for "<<nrhs<<" sources with "<<nev<<" eigenvectors took " << (t1-t0)/1e3 <<" ms"<<std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										599
									
								
								Grid/algorithms/iterative/AdefGeneric.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										599
									
								
								Grid/algorithms/iterative/AdefGeneric.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,599 @@ | ||||
|     /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/AdefGeneric.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #ifndef GRID_ALGORITHMS_ITERATIVE_GENERIC_PCG | ||||
| #define GRID_ALGORITHMS_ITERATIVE_GENERIC_PCG | ||||
|  | ||||
|   /* | ||||
|    * Compared to Tang-2009:  P=Pleft. P^T = PRight Q=MssInv.  | ||||
|    * Script A = SolverMatrix  | ||||
|    * Script P = Preconditioner | ||||
|    * | ||||
|    * Implement ADEF-2 | ||||
|    * | ||||
|    * Vstart = P^Tx + Qb | ||||
|    * M1 = P^TM + Q | ||||
|    * M2=M3=1 | ||||
|    */ | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| template<class Field> | ||||
| class TwoLevelCG : public LinearFunction<Field> | ||||
| { | ||||
|  public: | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   GridBase *grid; | ||||
|  | ||||
|   // Fine operator, Smoother, CoarseSolver | ||||
|   LinearOperatorBase<Field>   &_FineLinop; | ||||
|   LinearFunction<Field>   &_Smoother; | ||||
|    | ||||
|   // more most opertor functions | ||||
|   TwoLevelCG(RealD tol, | ||||
| 	     Integer maxit, | ||||
| 	     LinearOperatorBase<Field>   &FineLinop, | ||||
| 	     LinearFunction<Field>       &Smoother, | ||||
| 	     GridBase *fine) :  | ||||
|       Tolerance(tol),  | ||||
|       MaxIterations(maxit), | ||||
|       _FineLinop(FineLinop), | ||||
|       _Smoother(Smoother) | ||||
|   { | ||||
|     grid       = fine; | ||||
|   }; | ||||
|    | ||||
|   virtual void operator() (const Field &src, Field &x) | ||||
|   { | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg starting single RHS"<<std::endl; | ||||
|     RealD f; | ||||
|     RealD rtzp,rtz,a,d,b; | ||||
|     RealD rptzp; | ||||
|  | ||||
|     ///////////////////////////// | ||||
|     // Set up history vectors | ||||
|     ///////////////////////////// | ||||
|     int mmax = 5; | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocating"<<std::endl; | ||||
|     std::vector<Field> p(mmax,grid); | ||||
|     std::vector<Field> mmp(mmax,grid); | ||||
|     std::vector<RealD> pAp(mmax); | ||||
|     Field z(grid); | ||||
|     Field tmp(grid); | ||||
|     Field  mp (grid); | ||||
|     Field  r  (grid); | ||||
|     Field  mu (grid); | ||||
|      | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocated"<<std::endl; | ||||
|     //Initial residual computation & set up | ||||
|     RealD guess   = norm2(x); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg guess nrm "<<guess<<std::endl; | ||||
|     RealD src_nrm = norm2(src); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg src nrm "<<src_nrm<<std::endl; | ||||
|      | ||||
|     if ( src_nrm == 0.0 ) { | ||||
|       std::cout << GridLogMessage<<"HDCG: fPcg given trivial source norm "<<src_nrm<<std::endl; | ||||
|       x=Zero(); | ||||
|     } | ||||
|     RealD tn; | ||||
|      | ||||
|     GridStopWatch HDCGTimer; | ||||
|     HDCGTimer.Start(); | ||||
|     ////////////////////////// | ||||
|     // x0 = Vstart -- possibly modify guess | ||||
|     ////////////////////////// | ||||
|     Vstart(x,src); | ||||
|      | ||||
|     // r0 = b -A x0 | ||||
|     _FineLinop.HermOp(x,mmp[0]); | ||||
|     axpy (r, -1.0,mmp[0], src);    // Recomputes r=src-Ax0 | ||||
|     { | ||||
|       double n1 = norm2(x); | ||||
|       double n2 = norm2(mmp[0]); | ||||
|       double n3 = norm2(r); | ||||
|       std::cout<<GridLogMessage<<"x,vstart,r = "<<n1<<" "<<n2<<" "<<n3<<std::endl; | ||||
|     } | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // Compute z = M1 x | ||||
|     ////////////////////////////////// | ||||
|     PcgM1(r,z); | ||||
|     rtzp =real(innerProduct(r,z)); | ||||
|      | ||||
|     /////////////////////////////////////// | ||||
|     // Solve for Mss mu = P A z and set p = z-mu | ||||
|     // Def2 p = 1 - Q Az = Pright z | ||||
|     // Other algos M2 is trivial | ||||
|     /////////////////////////////////////// | ||||
|     PcgM2(z,p[0]); | ||||
|  | ||||
|     RealD ssq =  norm2(src); | ||||
|     RealD rsq =  ssq*Tolerance*Tolerance; | ||||
|  | ||||
|     std::cout << GridLogMessage<<"HDCG: k=0 residual "<<rtzp<<" rsq "<<rsq<<"\n"; | ||||
|  | ||||
|     Field pp(grid); | ||||
|  | ||||
|     for (int k=0;k<=MaxIterations;k++){ | ||||
|      | ||||
|       int peri_k  = k % mmax; | ||||
|       int peri_kp = (k+1) % mmax; | ||||
|  | ||||
|       rtz=rtzp; | ||||
|       d= PcgM3(p[peri_k],mmp[peri_k]); | ||||
|       a = rtz/d; | ||||
|      | ||||
|       // Memorise this | ||||
|       pAp[peri_k] = d; | ||||
|        | ||||
|       axpy(x,a,p[peri_k],x); | ||||
|       RealD rn = axpy_norm(r,-a,mmp[peri_k],r); | ||||
|  | ||||
|       // Compute z = M x | ||||
|       PcgM1(r,z); | ||||
|        | ||||
|       { | ||||
| 	RealD n1,n2; | ||||
| 	n1=norm2(r); | ||||
| 	n2=norm2(z); | ||||
| 	std::cout << GridLogMessage<<"HDCG::fPcg iteration "<<k<<" : vector r,z "<<n1<<" "<<n2<<"\n"; | ||||
|       } | ||||
|       rtzp =real(innerProduct(r,z)); | ||||
|       std::cout << GridLogMessage<<"HDCG::fPcg iteration "<<k<<" : inner rtzp "<<rtzp<<"\n"; | ||||
|  | ||||
|       //    PcgM2(z,p[0]); | ||||
|       PcgM2(z,mu); // ADEF-2 this is identity. Axpy possible to eliminate | ||||
|        | ||||
|       p[peri_kp]=mu; | ||||
|  | ||||
|       // Standard search direction  p -> z + b p     | ||||
|       b = (rtzp)/rtz; | ||||
|        | ||||
|       int northog; | ||||
|       // k=zero  <=> peri_kp=1;        northog = 1 | ||||
|       // k=1     <=> peri_kp=2;        northog = 2 | ||||
|       // ...               ...                  ... | ||||
|       // k=mmax-2<=> peri_kp=mmax-1;   northog = mmax-1 | ||||
|       // k=mmax-1<=> peri_kp=0;        northog = 1 | ||||
|  | ||||
|       //    northog     = (peri_kp==0)?1:peri_kp; // This is the fCG(mmax) algorithm | ||||
|       northog     = (k>mmax-1)?(mmax-1):k;        // This is the fCG-Tr(mmax-1) algorithm | ||||
|      | ||||
|       std::cout<<GridLogMessage<<"HDCG::fPcg iteration "<<k<<" : orthogonalising to last "<<northog<<" vectors\n"; | ||||
|       for(int back=0; back < northog; back++){ | ||||
| 	int peri_back = (k-back)%mmax; | ||||
| 	RealD pbApk= real(innerProduct(mmp[peri_back],p[peri_kp])); | ||||
| 	RealD beta = -pbApk/pAp[peri_back]; | ||||
| 	axpy(p[peri_kp],beta,p[peri_back],p[peri_kp]); | ||||
|       } | ||||
|  | ||||
|       RealD rrn=sqrt(rn/ssq); | ||||
|       RealD rtn=sqrt(rtz/ssq); | ||||
|       RealD rtnp=sqrt(rtzp/ssq); | ||||
|  | ||||
|       std::cout<<GridLogMessage<<"HDCG: fPcg k= "<<k<<" residual = "<<rrn<<"\n"; | ||||
|  | ||||
|       // Stopping condition | ||||
|       if ( rn <= rsq ) {  | ||||
|  | ||||
| 	HDCGTimer.Stop(); | ||||
| 	std::cout<<GridLogMessage<<"HDCG: fPcg converged in "<<k<<" iterations and "<<HDCGTimer.Elapsed()<<std::endl;; | ||||
| 	 | ||||
| 	_FineLinop.HermOp(x,mmp[0]);			   | ||||
| 	axpy(tmp,-1.0,src,mmp[0]); | ||||
| 	 | ||||
| 	RealD  mmpnorm = sqrt(norm2(mmp[0])); | ||||
| 	RealD  xnorm   = sqrt(norm2(x)); | ||||
| 	RealD  srcnorm = sqrt(norm2(src)); | ||||
| 	RealD  tmpnorm = sqrt(norm2(tmp)); | ||||
| 	RealD  true_residual = tmpnorm/srcnorm; | ||||
| 	std::cout<<GridLogMessage | ||||
| 	       <<"HDCG: true residual is "<<true_residual | ||||
| 	       <<" solution "<<xnorm | ||||
| 	       <<" source "<<srcnorm | ||||
| 	       <<" mmp "<<mmpnorm	   | ||||
| 	       <<std::endl; | ||||
|        | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|     HDCGTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"HDCG: not converged "<<HDCGTimer.Elapsed()<<std::endl; | ||||
|     RealD  xnorm   = sqrt(norm2(x)); | ||||
|     RealD  srcnorm = sqrt(norm2(src)); | ||||
|     std::cout<<GridLogMessage<<"HDCG: non-converged solution "<<xnorm<<" source "<<srcnorm<<std::endl; | ||||
|   } | ||||
|  | ||||
|  | ||||
|  | ||||
|   virtual void operator() (std::vector<Field> &src, std::vector<Field> &x) | ||||
|   { | ||||
|     std::cout << GridLogMessage<<"HDCG: mrhs fPcg starting"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     int nrhs = src.size(); | ||||
|     std::vector<RealD> f(nrhs); | ||||
|     std::vector<RealD> rtzp(nrhs); | ||||
|     std::vector<RealD> rtz(nrhs); | ||||
|     std::vector<RealD> a(nrhs); | ||||
|     std::vector<RealD> d(nrhs); | ||||
|     std::vector<RealD> b(nrhs); | ||||
|     std::vector<RealD> rptzp(nrhs); | ||||
|     ///////////////////////////// | ||||
|     // Set up history vectors | ||||
|     ///////////////////////////// | ||||
|     int mmax = 3; | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocating"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     std::vector<std::vector<Field> > p(nrhs);   for(int r=0;r<nrhs;r++)  p[r].resize(mmax,grid); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocated p"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     std::vector<std::vector<Field> > mmp(nrhs); for(int r=0;r<nrhs;r++) mmp[r].resize(mmax,grid); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocated mmp"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     std::vector<std::vector<RealD> > pAp(nrhs); for(int r=0;r<nrhs;r++) pAp[r].resize(mmax); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocated pAp"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     std::vector<Field> z(nrhs,grid); | ||||
|     std::vector<Field>  mp (nrhs,grid); | ||||
|     std::vector<Field>  r  (nrhs,grid); | ||||
|     std::vector<Field>  mu (nrhs,grid); | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg allocated z,mp,r,mu"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|  | ||||
|     //Initial residual computation & set up | ||||
|     std::vector<RealD> src_nrm(nrhs); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       src_nrm[rhs]=norm2(src[rhs]); | ||||
|       assert(src_nrm[rhs]!=0.0); | ||||
|     } | ||||
|     std::vector<RealD> tn(nrhs); | ||||
|  | ||||
|     GridStopWatch HDCGTimer; | ||||
|     HDCGTimer.Start(); | ||||
|     ////////////////////////// | ||||
|     // x0 = Vstart -- possibly modify guess | ||||
|     ////////////////////////// | ||||
|     Vstart(x,src); | ||||
|  | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       // r0 = b -A x0 | ||||
|       _FineLinop.HermOp(x[rhs],mmp[rhs][0]); | ||||
|       axpy (r[rhs], -1.0,mmp[rhs][0], src[rhs]);    // Recomputes r=src-Ax0 | ||||
|     } | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // Compute z = M1 x | ||||
|     ////////////////////////////////// | ||||
|     // This needs a multiRHS version for acceleration | ||||
|     PcgM1(r,z); | ||||
|  | ||||
|     std::vector<RealD> ssq(nrhs); | ||||
|     std::vector<RealD> rsq(nrhs); | ||||
|     std::vector<Field> pp(nrhs,grid); | ||||
|  | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       rtzp[rhs] =real(innerProduct(r[rhs],z[rhs])); | ||||
|       p[rhs][0]=z[rhs]; | ||||
|       ssq[rhs]=norm2(src[rhs]); | ||||
|       rsq[rhs]=  ssq[rhs]*Tolerance*Tolerance; | ||||
|       std::cout << GridLogMessage<<"mrhs HDCG: "<<rhs<<" k=0 residual "<<rtzp[rhs]<<" rsq "<<rsq[rhs]<<"\n"; | ||||
|     } | ||||
|  | ||||
|     std::vector<RealD> rn(nrhs); | ||||
|     for (int k=0;k<=MaxIterations;k++){ | ||||
|      | ||||
|       int peri_k  = k % mmax; | ||||
|       int peri_kp = (k+1) % mmax; | ||||
|  | ||||
|       for(int rhs=0;rhs<nrhs;rhs++){ | ||||
| 	rtz[rhs]=rtzp[rhs]; | ||||
| 	d[rhs]= PcgM3(p[rhs][peri_k],mmp[rhs][peri_k]); | ||||
| 	a[rhs] = rtz[rhs]/d[rhs]; | ||||
|      | ||||
| 	// Memorise this | ||||
| 	pAp[rhs][peri_k] = d[rhs]; | ||||
|  | ||||
| 	axpy(x[rhs],a[rhs],p[rhs][peri_k],x[rhs]); | ||||
| 	rn[rhs] = axpy_norm(r[rhs],-a[rhs],mmp[rhs][peri_k],r[rhs]); | ||||
|       } | ||||
|  | ||||
|       // Compute z = M x (for *all* RHS) | ||||
|       PcgM1(r,z); | ||||
|       std::cout << GridLogMessage<<"HDCG::fPcg M1 complete"<<std::endl; | ||||
|       grid->Barrier(); | ||||
|        | ||||
|       RealD max_rn=0.0; | ||||
|       for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|  | ||||
| 	rtzp[rhs] =real(innerProduct(r[rhs],z[rhs])); | ||||
|  | ||||
| 	std::cout << GridLogMessage<<"HDCG::fPcg rhs"<<rhs<<" iteration "<<k<<" : inner rtzp "<<rtzp[rhs]<<"\n"; | ||||
| 	 | ||||
| 	mu[rhs]=z[rhs]; | ||||
|  | ||||
| 	p[rhs][peri_kp]=mu[rhs]; | ||||
|  | ||||
| 	// Standard search direction p == z + b p  | ||||
| 	b[rhs] = (rtzp[rhs])/rtz[rhs]; | ||||
|  | ||||
| 	int northog = (k>mmax-1)?(mmax-1):k;        // This is the fCG-Tr(mmax-1) algorithm | ||||
| 	std::cout<<GridLogMessage<<"HDCG::fPcg iteration "<<k<<" : orthogonalising to last "<<northog<<" vectors\n"; | ||||
| 	for(int back=0; back < northog; back++){ | ||||
| 	  int peri_back = (k-back)%mmax; | ||||
| 	  RealD pbApk= real(innerProduct(mmp[rhs][peri_back],p[rhs][peri_kp])); | ||||
| 	  RealD beta = -pbApk/pAp[rhs][peri_back]; | ||||
| 	  axpy(p[rhs][peri_kp],beta,p[rhs][peri_back],p[rhs][peri_kp]); | ||||
| 	} | ||||
|  | ||||
| 	RealD rrn=sqrt(rn[rhs]/ssq[rhs]); | ||||
| 	RealD rtn=sqrt(rtz[rhs]/ssq[rhs]); | ||||
| 	RealD rtnp=sqrt(rtzp[rhs]/ssq[rhs]); | ||||
| 	 | ||||
| 	std::cout<<GridLogMessage<<"HDCG: rhs "<<rhs<<"fPcg k= "<<k<<" residual = "<<rrn<<"\n"; | ||||
| 	if ( rrn > max_rn ) max_rn = rrn; | ||||
|       } | ||||
|  | ||||
|       // Stopping condition based on worst case | ||||
|       if ( max_rn <= Tolerance ) {  | ||||
|  | ||||
| 	HDCGTimer.Stop(); | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg converged in "<<k<<" iterations and "<<HDCGTimer.Elapsed()<<std::endl;; | ||||
|  | ||||
| 	for(int rhs=0;rhs<nrhs;rhs++){ | ||||
| 	  _FineLinop.HermOp(x[rhs],mmp[rhs][0]);			   | ||||
| 	  Field tmp(grid); | ||||
| 	  axpy(tmp,-1.0,src[rhs],mmp[rhs][0]); | ||||
|        | ||||
| 	  RealD  mmpnorm = sqrt(norm2(mmp[rhs][0])); | ||||
| 	  RealD  xnorm   = sqrt(norm2(x[rhs])); | ||||
| 	  RealD  srcnorm = sqrt(norm2(src[rhs])); | ||||
| 	  RealD  tmpnorm = sqrt(norm2(tmp)); | ||||
| 	  RealD  true_residual = tmpnorm/srcnorm; | ||||
| 	  std::cout<<GridLogMessage | ||||
| 		   <<"HDCG: true residual ["<<rhs<<"] is "<<true_residual | ||||
| 		   <<" solution "<<xnorm | ||||
| 		   <<" source "<<srcnorm | ||||
| 		   <<" mmp "<<mmpnorm	   | ||||
| 		   <<std::endl; | ||||
| 	} | ||||
| 	return; | ||||
|       } | ||||
|        | ||||
|     } | ||||
|     HDCGTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"HDCG: not converged "<<HDCGTimer.Elapsed()<<std::endl; | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       RealD  xnorm   = sqrt(norm2(x[rhs])); | ||||
|       RealD  srcnorm = sqrt(norm2(src[rhs])); | ||||
|       std::cout<<GridLogMessage<<"HDCG: non-converged solution "<<xnorm<<" source "<<srcnorm<<std::endl; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|  | ||||
|  public: | ||||
|  | ||||
|   virtual void PcgM1(std::vector<Field> & in,std::vector<Field> & out) | ||||
|   { | ||||
|     std::cout << "PcgM1 default (cheat) mrhs version"<<std::endl; | ||||
|     for(int rhs=0;rhs<in.size();rhs++){ | ||||
|       this->PcgM1(in[rhs],out[rhs]); | ||||
|     } | ||||
|   } | ||||
|   virtual void PcgM1(Field & in, Field & out)     =0; | ||||
|   virtual void Vstart(std::vector<Field> & x,std::vector<Field> & src) | ||||
|   { | ||||
|     std::cout << "Vstart default (cheat) mrhs version"<<std::endl; | ||||
|     for(int rhs=0;rhs<x.size();rhs++){ | ||||
|       this->Vstart(x[rhs],src[rhs]); | ||||
|     } | ||||
|   } | ||||
|   virtual void Vstart(Field & x,const Field & src)=0; | ||||
|  | ||||
|   virtual void PcgM2(const Field & in, Field & out) { | ||||
|     out=in; | ||||
|   } | ||||
|  | ||||
|   virtual RealD PcgM3(const Field & p, Field & mmp){ | ||||
|     RealD dd; | ||||
|     _FineLinop.HermOp(p,mmp); | ||||
|     ComplexD dot = innerProduct(p,mmp); | ||||
|     dd=real(dot); | ||||
|     return dd; | ||||
|   } | ||||
|  | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
|   // Only Def1 has non-trivial Vout. | ||||
|   ///////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| }; | ||||
|    | ||||
| template<class Field, class CoarseField, class Aggregation> | ||||
| class TwoLevelADEF2 : public TwoLevelCG<Field> | ||||
| { | ||||
|  public: | ||||
|   /////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Need something that knows how to get from Coarse to fine and back again | ||||
|   //  void ProjectToSubspace(CoarseVector &CoarseVec,const FineField &FineVec){ | ||||
|   //  void PromoteFromSubspace(const CoarseVector &CoarseVec,FineField &FineVec){ | ||||
|   /////////////////////////////////////////////////////////////////////////////////// | ||||
|   GridBase *coarsegrid; | ||||
|   Aggregation &_Aggregates;                     | ||||
|   LinearFunction<CoarseField> &_CoarseSolver; | ||||
|   LinearFunction<CoarseField> &_CoarseSolverPrecise; | ||||
|   /////////////////////////////////////////////////////////////////////////////////// | ||||
|    | ||||
|   // more most opertor functions | ||||
|   TwoLevelADEF2(RealD tol, | ||||
| 		Integer maxit, | ||||
| 		LinearOperatorBase<Field>    &FineLinop, | ||||
| 		LinearFunction<Field>        &Smoother, | ||||
| 		LinearFunction<CoarseField>  &CoarseSolver, | ||||
| 		LinearFunction<CoarseField>  &CoarseSolverPrecise, | ||||
| 		Aggregation &Aggregates | ||||
| 		) : | ||||
|       TwoLevelCG<Field>(tol,maxit,FineLinop,Smoother,Aggregates.FineGrid), | ||||
|       _CoarseSolver(CoarseSolver), | ||||
|       _CoarseSolverPrecise(CoarseSolverPrecise), | ||||
|       _Aggregates(Aggregates) | ||||
|   { | ||||
|     coarsegrid = Aggregates.CoarseGrid; | ||||
|   }; | ||||
|  | ||||
|   virtual void PcgM1(Field & in, Field & out) | ||||
|   { | ||||
|     GRID_TRACE("MultiGridPreconditioner "); | ||||
|     // [PTM+Q] in = [1 - Q A] M in + Q in = Min + Q [ in -A Min] | ||||
|  | ||||
|     Field tmp(this->grid); | ||||
|     Field Min(this->grid); | ||||
|     CoarseField PleftProj(this->coarsegrid); | ||||
|     CoarseField PleftMss_proj(this->coarsegrid); | ||||
|  | ||||
|     GridStopWatch SmootherTimer; | ||||
|     GridStopWatch MatrixTimer; | ||||
|     SmootherTimer.Start(); | ||||
|     this->_Smoother(in,Min); | ||||
|     SmootherTimer.Stop(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     this->_FineLinop.HermOp(Min,out); | ||||
|     MatrixTimer.Stop(); | ||||
|     axpy(tmp,-1.0,out,in);          // tmp  = in - A Min | ||||
|  | ||||
|     GridStopWatch ProjTimer; | ||||
|     GridStopWatch CoarseTimer; | ||||
|     GridStopWatch PromTimer; | ||||
|     ProjTimer.Start(); | ||||
|     this->_Aggregates.ProjectToSubspace(PleftProj,tmp);      | ||||
|     ProjTimer.Stop(); | ||||
|     CoarseTimer.Start(); | ||||
|     this->_CoarseSolver(PleftProj,PleftMss_proj); // Ass^{-1} [in - A Min]_s | ||||
|     CoarseTimer.Stop(); | ||||
|     PromTimer.Start(); | ||||
|     this->_Aggregates.PromoteFromSubspace(PleftMss_proj,tmp);// tmp = Q[in - A Min]   | ||||
|     PromTimer.Stop(); | ||||
|     std::cout << GridLogPerformance << "PcgM1 breakdown "<<std::endl; | ||||
|     std::cout << GridLogPerformance << "\tSmoother   " << SmootherTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\tProj       " << ProjTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\tCoarse     " << CoarseTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\tProm       " << PromTimer.Elapsed() <<std::endl; | ||||
|  | ||||
|     axpy(out,1.0,Min,tmp); // Min+tmp | ||||
|   } | ||||
|  | ||||
|   virtual void Vstart(Field & x,const Field & src) | ||||
|   { | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg Vstart "<<std::endl; | ||||
|     /////////////////////////////////// | ||||
|     // Choose x_0 such that  | ||||
|     // x_0 = guess +  (A_ss^inv) r_s = guess + Ass_inv [src -Aguess] | ||||
|     //                               = [1 - Ass_inv A] Guess + Assinv src | ||||
|     //                               = P^T guess + Assinv src  | ||||
|     //                               = Vstart  [Tang notation] | ||||
|     // This gives: | ||||
|     // W^T (src - A x_0) = src_s - A guess_s - r_s | ||||
|     //                   = src_s - (A guess)_s - src_s  + (A guess)_s  | ||||
|     //                   = 0  | ||||
|     /////////////////////////////////// | ||||
|     Field r(this->grid); | ||||
|     Field mmp(this->grid); | ||||
|     CoarseField PleftProj(this->coarsegrid); | ||||
|     CoarseField PleftMss_proj(this->coarsegrid); | ||||
|  | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg Vstart projecting "<<std::endl; | ||||
|     this->_Aggregates.ProjectToSubspace(PleftProj,src);      | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg Vstart coarse solve "<<std::endl; | ||||
|     this->_CoarseSolverPrecise(PleftProj,PleftMss_proj); // Ass^{-1} r_s | ||||
|     std::cout << GridLogMessage<<"HDCG: fPcg Vstart promote "<<std::endl; | ||||
|     this->_Aggregates.PromoteFromSubspace(PleftMss_proj,x);   | ||||
|  | ||||
|   } | ||||
|  | ||||
| }; | ||||
|  | ||||
|    | ||||
| template<class Field> | ||||
| class TwoLevelADEF1defl : public TwoLevelCG<Field> | ||||
| { | ||||
| public: | ||||
|   const std::vector<Field> &evec; | ||||
|   const std::vector<RealD> &eval; | ||||
|    | ||||
|   TwoLevelADEF1defl(RealD tol, | ||||
| 		   Integer maxit, | ||||
| 		   LinearOperatorBase<Field>   &FineLinop, | ||||
| 		   LinearFunction<Field>   &Smoother, | ||||
| 		   std::vector<Field> &_evec, | ||||
| 		   std::vector<RealD> &_eval) :  | ||||
|     TwoLevelCG<Field>(tol,maxit,FineLinop,Smoother,_evec[0].Grid()), | ||||
|     evec(_evec), | ||||
|     eval(_eval) | ||||
|   {}; | ||||
|  | ||||
|   // Can just inherit existing M2 | ||||
|   // Can just inherit existing M3 | ||||
|  | ||||
|   // Simple vstart - do nothing | ||||
|   virtual void Vstart(Field & x,const Field & src){ | ||||
|     x=src; // Could apply Q | ||||
|   }; | ||||
|  | ||||
|   // Override PcgM1 | ||||
|   virtual void PcgM1(Field & in, Field & out) | ||||
|   { | ||||
|     GRID_TRACE("EvecPreconditioner "); | ||||
|     int N=evec.size(); | ||||
|     Field Pin(this->grid); | ||||
|     Field Qin(this->grid); | ||||
|  | ||||
|     //MP  + Q = M(1-AQ) + Q = M | ||||
|     // // If we are eigenvector deflating in coarse space | ||||
|     // // Q   = Sum_i |phi_i> 1/lambda_i <phi_i| | ||||
|     // // A Q = Sum_i |phi_i> <phi_i| | ||||
|     // // M(1-AQ) = M(1-proj) + Q | ||||
|     Qin.Checkerboard()=in.Checkerboard(); | ||||
|     Qin = Zero(); | ||||
|     Pin = in; | ||||
|     for (int i=0;i<N;i++) { | ||||
|       const Field& tmp = evec[i]; | ||||
|       auto ip = TensorRemove(innerProduct(tmp,in)); | ||||
|       axpy(Qin, ip / eval[i],tmp,Qin); | ||||
|       axpy(Pin, -ip ,tmp,Pin); | ||||
|     } | ||||
|  | ||||
|     this->_Smoother(Pin,out); | ||||
|  | ||||
|     out = out + Qin; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										718
									
								
								Grid/algorithms/iterative/AdefMrhs.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										718
									
								
								Grid/algorithms/iterative/AdefMrhs.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,718 @@ | ||||
|     /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/AdefGeneric.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
|  | ||||
|   /* | ||||
|    * Compared to Tang-2009:  P=Pleft. P^T = PRight Q=MssInv.  | ||||
|    * Script A = SolverMatrix  | ||||
|    * Script P = Preconditioner | ||||
|    * | ||||
|    * Implement ADEF-2 | ||||
|    * | ||||
|    * Vstart = P^Tx + Qb | ||||
|    * M1 = P^TM + Q | ||||
|    * M2=M3=1 | ||||
|    */ | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| template<class Field> | ||||
| class TwoLevelCGmrhs | ||||
| { | ||||
|  public: | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   GridBase *grid; | ||||
|  | ||||
|   // Fine operator, Smoother, CoarseSolver | ||||
|   LinearOperatorBase<Field>   &_FineLinop; | ||||
|   LinearFunction<Field>   &_Smoother; | ||||
|   MultiRHSBlockCGLinalg<Field> _BlockCGLinalg; | ||||
|  | ||||
|   GridStopWatch ProjectTimer; | ||||
|   GridStopWatch PromoteTimer; | ||||
|   GridStopWatch DeflateTimer; | ||||
|   GridStopWatch CoarseTimer; | ||||
|   GridStopWatch FineTimer; | ||||
|   GridStopWatch SmoothTimer; | ||||
|   GridStopWatch InsertTimer; | ||||
|  | ||||
|    | ||||
|   // more most opertor functions | ||||
|   TwoLevelCGmrhs(RealD tol, | ||||
| 		 Integer maxit, | ||||
| 		 LinearOperatorBase<Field>   &FineLinop, | ||||
| 		 LinearFunction<Field>       &Smoother, | ||||
| 		 GridBase *fine) :  | ||||
|     Tolerance(tol),  | ||||
|     MaxIterations(maxit), | ||||
|     _FineLinop(FineLinop), | ||||
|     _Smoother(Smoother) | ||||
|   { | ||||
|     grid       = fine; | ||||
|   }; | ||||
|    | ||||
|   // Vector case | ||||
|   virtual void operator() (std::vector<Field> &src, std::vector<Field> &x) | ||||
|   { | ||||
|     SolveSingleSystem(src,x); | ||||
|     //    SolvePrecBlockCG(src,x); | ||||
|   } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Thin QR factorisation (google it) | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   //Dimensions | ||||
|   // R_{ferm x Nblock} =  Q_{ferm x Nblock} x  C_{Nblock x Nblock} -> ferm x Nblock | ||||
|   // | ||||
|   // Rdag R = m_rr = Herm = L L^dag        <-- Cholesky decomposition (LLT routine in Eigen) | ||||
|   // | ||||
|   //   Q  C = R => Q = R C^{-1} | ||||
|   // | ||||
|   // Want  Ident = Q^dag Q = C^{-dag} R^dag R C^{-1} = C^{-dag} L L^dag C^{-1} = 1_{Nblock x Nblock}  | ||||
|   // | ||||
|   // Set C = L^{dag}, and then Q^dag Q = ident  | ||||
|   // | ||||
|   // Checks: | ||||
|   // Cdag C = Rdag R ; passes. | ||||
|   // QdagQ  = 1      ; passes | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   void ThinQRfact (Eigen::MatrixXcd &m_zz, | ||||
| 		   Eigen::MatrixXcd &C, | ||||
| 		   Eigen::MatrixXcd &Cinv, | ||||
| 		   std::vector<Field> &  Q, | ||||
| 		   std::vector<Field> & MQ, | ||||
| 		   const std::vector<Field> & Z, | ||||
| 		   const std::vector<Field> & MZ) | ||||
|   { | ||||
|     RealD t0=usecond(); | ||||
|     _BlockCGLinalg.InnerProductMatrix(m_zz,MZ,Z); | ||||
|     RealD t1=usecond(); | ||||
|  | ||||
|     m_zz = 0.5*(m_zz+m_zz.adjoint()); | ||||
|      | ||||
|     Eigen::MatrixXcd L    = m_zz.llt().matrixL();  | ||||
|      | ||||
|     C    = L.adjoint(); | ||||
|     Cinv = C.inverse(); | ||||
|      | ||||
|     RealD t3=usecond(); | ||||
|     _BlockCGLinalg.MulMatrix( Q,Cinv,Z); | ||||
|     _BlockCGLinalg.MulMatrix(MQ,Cinv,MZ); | ||||
|     RealD t4=usecond(); | ||||
|     std::cout << " ThinQRfact IP    :"<< t1-t0<<" us"<<std::endl; | ||||
|     std::cout << " ThinQRfact Eigen :"<< t3-t1<<" us"<<std::endl; | ||||
|     std::cout << " ThinQRfact MulMat:"<< t4-t3<<" us"<<std::endl; | ||||
|   } | ||||
|  | ||||
|   virtual void SolvePrecBlockCG (std::vector<Field> &src, std::vector<Field> &X) | ||||
|   { | ||||
|     std::cout << GridLogMessage<<"HDCG: mrhs fPrecBlockcg starting"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     int nrhs = src.size(); | ||||
|     //    std::vector<RealD> f(nrhs); | ||||
|     //    std::vector<RealD> rtzp(nrhs); | ||||
|     //    std::vector<RealD> rtz(nrhs); | ||||
|     //    std::vector<RealD> a(nrhs); | ||||
|     //    std::vector<RealD> d(nrhs); | ||||
|     //    std::vector<RealD> b(nrhs); | ||||
|     //    std::vector<RealD> rptzp(nrhs); | ||||
|  | ||||
|     //////////////////////////////////////////// | ||||
|     //Initial residual computation & set up | ||||
|     //////////////////////////////////////////// | ||||
|     std::vector<RealD> ssq(nrhs); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       ssq[rhs]=norm2(src[rhs]); assert(ssq[rhs]!=0.0); | ||||
|     }       | ||||
|  | ||||
|     /////////////////////////// | ||||
|     // Fields -- eliminate duplicates between fPcg and block cg | ||||
|     /////////////////////////// | ||||
|     std::vector<Field> Mtmp(nrhs,grid); | ||||
|     std::vector<Field> tmp(nrhs,grid); | ||||
|     std::vector<Field>   Z(nrhs,grid); // Rename Z to R | ||||
|     std::vector<Field>  MZ(nrhs,grid); // Rename MZ to Z | ||||
|     std::vector<Field>   Q(nrhs,grid); //  | ||||
|     std::vector<Field>  MQ(nrhs,grid); // Rename to P | ||||
|     std::vector<Field>   D(nrhs,grid); | ||||
|     std::vector<Field>  AD(nrhs,grid); | ||||
|      | ||||
|     /************************************************************************ | ||||
|      * Preconditioned Block conjugate gradient rQ | ||||
|      * Generalise Sebastien Birk Thesis, after Dubrulle 2001. | ||||
|      * Introduce preconditioning following Saad Ch9 | ||||
|      ************************************************************************ | ||||
|      * Dimensions: | ||||
|      * | ||||
|      *   X,B etc... ==(Nferm x nrhs) | ||||
|      *  Matrix A==(Nferm x Nferm) | ||||
|      *   | ||||
|      * Nferm = Nspin x Ncolour x Ncomplex x Nlattice_site | ||||
|      * QC => Thin QR factorisation (google it) | ||||
|      * | ||||
|      * R = B-AX | ||||
|      * Z = Mi R | ||||
|      * QC = Z | ||||
|      * D = Q  | ||||
|      * for k:  | ||||
|      *   R  = AD | ||||
|      *   Z  = Mi R | ||||
|      *   M  = [D^dag R]^{-1} | ||||
|      *   X  = X + D M C | ||||
|      *   QS = Q - Z.M | ||||
|      *   D  = Q + D S^dag | ||||
|      *   C  = S C | ||||
|      */ | ||||
|     Eigen::MatrixXcd m_DZ     = Eigen::MatrixXcd::Identity(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_M      = Eigen::MatrixXcd::Identity(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_zz     = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_rr     = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|      | ||||
|     Eigen::MatrixXcd m_C      = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_Cinv   = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_S      = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_Sinv   = Eigen::MatrixXcd::Zero(nrhs,nrhs); | ||||
|      | ||||
|     Eigen::MatrixXcd m_tmp    = Eigen::MatrixXcd::Identity(nrhs,nrhs); | ||||
|     Eigen::MatrixXcd m_tmp1   = Eigen::MatrixXcd::Identity(nrhs,nrhs); | ||||
|  | ||||
|     GridStopWatch HDCGTimer; | ||||
|  | ||||
|     ////////////////////////// | ||||
|     // x0 = Vstart -- possibly modify guess | ||||
|     ////////////////////////// | ||||
|     Vstart(X,src); | ||||
|  | ||||
|     ////////////////////////// | ||||
|     // R = B-AX | ||||
|     ////////////////////////// | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       // r0 = b -A x0 | ||||
|       _FineLinop.HermOp(X[rhs],tmp[rhs]); | ||||
|       axpy (Z[rhs], -1.0,tmp[rhs], src[rhs]);    // Computes R=Z=src - A X0 | ||||
|     } | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // Compute MZ = M1 Z = M1 B - M1 A x0 | ||||
|     ////////////////////////////////// | ||||
|     PcgM1(Z,MZ);   | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // QC = Z | ||||
|     ////////////////////////////////// | ||||
|     ThinQRfact (m_zz, m_C, m_Cinv, Q, MQ, Z, MZ); | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // D=MQ | ||||
|     ////////////////////////////////// | ||||
|     for(int b=0;b<nrhs;b++) D[b]=MQ[b]; // LLT rotation of the MZ basis of search dirs | ||||
|  | ||||
|     std::cout << GridLogMessage<<"PrecBlockCGrQ vec computed initial residual and QR fact " <<std::endl; | ||||
|  | ||||
|     ProjectTimer.Reset(); | ||||
|     PromoteTimer.Reset(); | ||||
|     DeflateTimer.Reset(); | ||||
|     CoarseTimer.Reset(); | ||||
|     SmoothTimer.Reset(); | ||||
|     FineTimer.Reset(); | ||||
|     InsertTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch M1Timer; | ||||
|     GridStopWatch M2Timer; | ||||
|     GridStopWatch M3Timer; | ||||
|     GridStopWatch LinalgTimer; | ||||
|     GridStopWatch InnerProdTimer; | ||||
|  | ||||
|     HDCGTimer.Start(); | ||||
|  | ||||
|     std::vector<RealD> rn(nrhs); | ||||
|     for (int k=0;k<=MaxIterations;k++){ | ||||
|  | ||||
|       //////////////////// | ||||
|       // Z  = AD | ||||
|       //////////////////// | ||||
|       M3Timer.Start(); | ||||
|       for(int b=0;b<nrhs;b++) _FineLinop.HermOp(D[b], Z[b]);       | ||||
|       M3Timer.Stop(); | ||||
|  | ||||
|       //////////////////// | ||||
|       // MZ  = M1 Z <==== the Multigrid preconditioner | ||||
|       //////////////////// | ||||
|       M1Timer.Start(); | ||||
|       PcgM1(Z,MZ); | ||||
|       M1Timer.Stop(); | ||||
|  | ||||
|       FineTimer.Start(); | ||||
|       //////////////////// | ||||
|       // M  = [D^dag Z]^{-1} = (<Ddag MZ>_M)^{-1} inner prod, generalising Saad derivation of Precon CG | ||||
|       //////////////////// | ||||
|       InnerProdTimer.Start(); | ||||
|       _BlockCGLinalg.InnerProductMatrix(m_DZ,D,Z); | ||||
|       InnerProdTimer.Stop(); | ||||
|       m_M       = m_DZ.inverse(); | ||||
|  | ||||
|       /////////////////////////// | ||||
|       // X  = X + D MC | ||||
|       /////////////////////////// | ||||
|       m_tmp     = m_M * m_C; | ||||
|       LinalgTimer.Start(); | ||||
|       _BlockCGLinalg.MaddMatrix(X,m_tmp, D,X);     // D are the search directions and X takes the updates  | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       /////////////////////////// | ||||
|       // QS = Q - M Z | ||||
|       // (MQ) S = MQ - M (M1Z) | ||||
|       /////////////////////////// | ||||
|       LinalgTimer.Start(); | ||||
|       _BlockCGLinalg.MaddMatrix(tmp ,m_M, Z, Q,-1.0); | ||||
|       _BlockCGLinalg.MaddMatrix(Mtmp,m_M,MZ,MQ,-1.0); | ||||
|       ThinQRfact (m_zz, m_S, m_Sinv, Q, MQ, tmp, Mtmp); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       //////////////////////////// | ||||
|       // D  = MQ + D S^dag | ||||
|       //////////////////////////// | ||||
|       m_tmp = m_S.adjoint(); | ||||
|       LinalgTimer.Start(); | ||||
|       _BlockCGLinalg.MaddMatrix(D,m_tmp,D,MQ); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       //////////////////////////// | ||||
|       // C  = S C | ||||
|       //////////////////////////// | ||||
|       m_C = m_S*m_C; | ||||
|        | ||||
|       //////////////////////////// | ||||
|       // convergence monitor | ||||
|       //////////////////////////// | ||||
|       m_rr = m_C.adjoint() * m_C; | ||||
|        | ||||
|       FineTimer.Stop(); | ||||
|  | ||||
|       RealD max_resid=0; | ||||
|       RealD rrsum=0; | ||||
|       RealD sssum=0; | ||||
|       RealD rr; | ||||
|  | ||||
|       for(int b=0;b<nrhs;b++) { | ||||
| 	rrsum+=real(m_rr(b,b)); | ||||
| 	sssum+=ssq[b]; | ||||
| 	rr = real(m_rr(b,b))/ssq[b]; | ||||
| 	if ( rr > max_resid ) max_resid = rr; | ||||
|       } | ||||
|       std::cout << GridLogMessage << | ||||
| 	  "\t Prec BlockCGrQ Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl; | ||||
|  | ||||
|  | ||||
|       if ( max_resid < Tolerance*Tolerance ) {  | ||||
|  | ||||
| 	HDCGTimer.Stop(); | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ converged in "<<k<<" iterations and "<<HDCGTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Linalg  "<<LinalgTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : fine H  "<<M3Timer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : prec M1 "<<M1Timer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"**** M1 breakdown:"<<std::endl; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Project "<<ProjectTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Promote "<<PromoteTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Deflate "<<DeflateTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Coarse  "<<CoarseTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Fine    "<<FineTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Smooth  "<<SmoothTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs PrecBlockCGrQ : Insert  "<<InsertTimer.Elapsed()<<std::endl;; | ||||
|  | ||||
| 	for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|  | ||||
| 	  _FineLinop.HermOp(X[rhs],tmp[rhs]);			   | ||||
|  | ||||
| 	  Field mytmp(grid); | ||||
| 	  axpy(mytmp,-1.0,src[rhs],tmp[rhs]); | ||||
|        | ||||
| 	  RealD  xnorm   = sqrt(norm2(X[rhs])); | ||||
| 	  RealD  srcnorm = sqrt(norm2(src[rhs])); | ||||
| 	  RealD  tmpnorm = sqrt(norm2(mytmp)); | ||||
| 	  RealD  true_residual = tmpnorm/srcnorm; | ||||
| 	  std::cout<<GridLogMessage | ||||
| 		   <<"HDCG: true residual ["<<rhs<<"] is "<<true_residual | ||||
| 		   <<" solution "<<xnorm | ||||
| 		   <<" source "<<srcnorm | ||||
| 		   <<std::endl; | ||||
| 	} | ||||
| 	return; | ||||
|       } | ||||
|        | ||||
|     } | ||||
|     HDCGTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"HDCG: PrecBlockCGrQ not converged "<<HDCGTimer.Elapsed()<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
|   virtual void SolveSingleSystem (std::vector<Field> &src, std::vector<Field> &x) | ||||
|   { | ||||
|     std::cout << GridLogMessage<<"HDCG: mrhs fPcg starting"<<std::endl; | ||||
|     src[0].Grid()->Barrier(); | ||||
|     int nrhs = src.size(); | ||||
|     std::vector<RealD> f(nrhs); | ||||
|     std::vector<RealD> rtzp(nrhs); | ||||
|     std::vector<RealD> rtz(nrhs); | ||||
|     std::vector<RealD> a(nrhs); | ||||
|     std::vector<RealD> d(nrhs); | ||||
|     std::vector<RealD> b(nrhs); | ||||
|     std::vector<RealD> rptzp(nrhs); | ||||
|     ///////////////////////////// | ||||
|     // Set up history vectors | ||||
|     ///////////////////////////// | ||||
|     int mmax = 3; | ||||
|  | ||||
|     std::vector<std::vector<Field> > p(nrhs);   for(int r=0;r<nrhs;r++)  p[r].resize(mmax,grid); | ||||
|     std::vector<std::vector<Field> > mmp(nrhs); for(int r=0;r<nrhs;r++) mmp[r].resize(mmax,grid); | ||||
|     std::vector<std::vector<RealD> > pAp(nrhs); for(int r=0;r<nrhs;r++) pAp[r].resize(mmax); | ||||
|  | ||||
|     std::vector<Field> z(nrhs,grid); | ||||
|     std::vector<Field>  mp (nrhs,grid); | ||||
|     std::vector<Field>  r  (nrhs,grid); | ||||
|     std::vector<Field>  mu (nrhs,grid); | ||||
|  | ||||
|     //Initial residual computation & set up | ||||
|     std::vector<RealD> src_nrm(nrhs); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       src_nrm[rhs]=norm2(src[rhs]); | ||||
|       assert(src_nrm[rhs]!=0.0); | ||||
|     } | ||||
|     std::vector<RealD> tn(nrhs); | ||||
|  | ||||
|     GridStopWatch HDCGTimer; | ||||
|     ////////////////////////// | ||||
|     // x0 = Vstart -- possibly modify guess | ||||
|     ////////////////////////// | ||||
|     Vstart(x,src); | ||||
|  | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       // r0 = b -A x0 | ||||
|       _FineLinop.HermOp(x[rhs],mmp[rhs][0]); | ||||
|       axpy (r[rhs], -1.0,mmp[rhs][0], src[rhs]);    // Recomputes r=src-Ax0 | ||||
|     } | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // Compute z = M1 x | ||||
|     ////////////////////////////////// | ||||
|     // This needs a multiRHS version for acceleration | ||||
|     PcgM1(r,z); | ||||
|  | ||||
|     std::vector<RealD> ssq(nrhs); | ||||
|     std::vector<RealD> rsq(nrhs); | ||||
|     std::vector<Field> pp(nrhs,grid); | ||||
|  | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       rtzp[rhs] =real(innerProduct(r[rhs],z[rhs])); | ||||
|       p[rhs][0]=z[rhs]; | ||||
|       ssq[rhs]=norm2(src[rhs]); | ||||
|       rsq[rhs]=  ssq[rhs]*Tolerance*Tolerance; | ||||
|       //      std::cout << GridLogMessage<<"mrhs HDCG: "<<rhs<<" k=0 residual "<<rtzp[rhs]<<" rsq "<<rsq[rhs]<<"\n"; | ||||
|     } | ||||
|  | ||||
|     ProjectTimer.Reset(); | ||||
|     PromoteTimer.Reset(); | ||||
|     DeflateTimer.Reset(); | ||||
|     CoarseTimer.Reset(); | ||||
|     SmoothTimer.Reset(); | ||||
|     FineTimer.Reset(); | ||||
|     InsertTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch M1Timer; | ||||
|     GridStopWatch M2Timer; | ||||
|     GridStopWatch M3Timer; | ||||
|     GridStopWatch LinalgTimer; | ||||
|  | ||||
|     HDCGTimer.Start(); | ||||
|  | ||||
|     std::vector<RealD> rn(nrhs); | ||||
|     for (int k=0;k<=MaxIterations;k++){ | ||||
|      | ||||
|       int peri_k  = k % mmax; | ||||
|       int peri_kp = (k+1) % mmax; | ||||
|  | ||||
|       for(int rhs=0;rhs<nrhs;rhs++){ | ||||
| 	rtz[rhs]=rtzp[rhs]; | ||||
| 	M3Timer.Start(); | ||||
| 	d[rhs]= PcgM3(p[rhs][peri_k],mmp[rhs][peri_k]); | ||||
| 	M3Timer.Stop(); | ||||
| 	a[rhs] = rtz[rhs]/d[rhs]; | ||||
|  | ||||
| 	LinalgTimer.Start(); | ||||
| 	// Memorise this | ||||
| 	pAp[rhs][peri_k] = d[rhs]; | ||||
|  | ||||
| 	axpy(x[rhs],a[rhs],p[rhs][peri_k],x[rhs]); | ||||
| 	rn[rhs] = axpy_norm(r[rhs],-a[rhs],mmp[rhs][peri_k],r[rhs]); | ||||
| 	LinalgTimer.Stop(); | ||||
|       } | ||||
|  | ||||
|       // Compute z = M x (for *all* RHS) | ||||
|       M1Timer.Start(); | ||||
|       PcgM1(r,z); | ||||
|       M1Timer.Stop(); | ||||
|        | ||||
|       RealD max_rn=0.0; | ||||
|       LinalgTimer.Start(); | ||||
|       for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|  | ||||
| 	rtzp[rhs] =real(innerProduct(r[rhs],z[rhs])); | ||||
|  | ||||
| 	//	std::cout << GridLogMessage<<"HDCG::fPcg rhs"<<rhs<<" iteration "<<k<<" : inner rtzp "<<rtzp[rhs]<<"\n"; | ||||
| 	mu[rhs]=z[rhs]; | ||||
|  | ||||
| 	p[rhs][peri_kp]=mu[rhs]; | ||||
|  | ||||
| 	// Standard search direction p == z + b p  | ||||
| 	b[rhs] = (rtzp[rhs])/rtz[rhs]; | ||||
|  | ||||
| 	int northog = (k>mmax-1)?(mmax-1):k;        // This is the fCG-Tr(mmax-1) algorithm | ||||
| 	for(int back=0; back < northog; back++){ | ||||
| 	  int peri_back = (k-back)%mmax; | ||||
| 	  RealD pbApk= real(innerProduct(mmp[rhs][peri_back],p[rhs][peri_kp])); | ||||
| 	  RealD beta = -pbApk/pAp[rhs][peri_back]; | ||||
| 	  axpy(p[rhs][peri_kp],beta,p[rhs][peri_back],p[rhs][peri_kp]); | ||||
| 	} | ||||
|  | ||||
| 	RealD rrn=sqrt(rn[rhs]/ssq[rhs]); | ||||
| 	RealD rtn=sqrt(rtz[rhs]/ssq[rhs]); | ||||
| 	RealD rtnp=sqrt(rtzp[rhs]/ssq[rhs]); | ||||
| 	 | ||||
| 	std::cout<<GridLogMessage<<"HDCG:fPcg rhs "<<rhs<<" k= "<<k<<" residual = "<<rrn<<"\n"; | ||||
| 	if ( rrn > max_rn ) max_rn = rrn; | ||||
|       } | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       // Stopping condition based on worst case | ||||
|       if ( max_rn <= Tolerance ) {  | ||||
|  | ||||
| 	HDCGTimer.Stop(); | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg converged in "<<k<<" iterations and "<<HDCGTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Linalg  "<<LinalgTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : fine M3 "<<M3Timer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : prec M1 "<<M1Timer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"**** M1 breakdown:"<<std::endl; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Project "<<ProjectTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Promote "<<PromoteTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Deflate "<<DeflateTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Coarse  "<<CoarseTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Fine    "<<FineTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Smooth  "<<SmoothTimer.Elapsed()<<std::endl;; | ||||
| 	std::cout<<GridLogMessage<<"HDCG: mrhs fPcg : Insert  "<<InsertTimer.Elapsed()<<std::endl;; | ||||
|  | ||||
| 	for(int rhs=0;rhs<nrhs;rhs++){ | ||||
| 	  _FineLinop.HermOp(x[rhs],mmp[rhs][0]);			   | ||||
| 	  Field tmp(grid); | ||||
| 	  axpy(tmp,-1.0,src[rhs],mmp[rhs][0]); | ||||
|        | ||||
| 	  RealD  mmpnorm = sqrt(norm2(mmp[rhs][0])); | ||||
| 	  RealD  xnorm   = sqrt(norm2(x[rhs])); | ||||
| 	  RealD  srcnorm = sqrt(norm2(src[rhs])); | ||||
| 	  RealD  tmpnorm = sqrt(norm2(tmp)); | ||||
| 	  RealD  true_residual = tmpnorm/srcnorm; | ||||
| 	  std::cout<<GridLogMessage | ||||
| 		   <<"HDCG: true residual ["<<rhs<<"] is "<<true_residual | ||||
| 		   <<" solution "<<xnorm | ||||
| 		   <<" source "<<srcnorm | ||||
| 		   <<" mmp "<<mmpnorm	   | ||||
| 		   <<std::endl; | ||||
| 	} | ||||
| 	return; | ||||
|       } | ||||
|        | ||||
|     } | ||||
|     HDCGTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"HDCG: not converged "<<HDCGTimer.Elapsed()<<std::endl; | ||||
|     for(int rhs=0;rhs<nrhs;rhs++){ | ||||
|       RealD  xnorm   = sqrt(norm2(x[rhs])); | ||||
|       RealD  srcnorm = sqrt(norm2(src[rhs])); | ||||
|       std::cout<<GridLogMessage<<"HDCG: non-converged solution "<<xnorm<<" source "<<srcnorm<<std::endl; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|  | ||||
|  public: | ||||
|  | ||||
|   virtual void PcgM1(std::vector<Field> & in,std::vector<Field> & out) = 0; | ||||
|   virtual void Vstart(std::vector<Field> & x,std::vector<Field> & src) = 0; | ||||
|   virtual void PcgM2(const Field & in, Field & out) { | ||||
|     out=in; | ||||
|   } | ||||
|  | ||||
|   virtual RealD PcgM3(const Field & p, Field & mmp){ | ||||
|     RealD dd; | ||||
|     _FineLinop.HermOp(p,mmp); | ||||
|     ComplexD dot = innerProduct(p,mmp); | ||||
|     dd=real(dot); | ||||
|     return dd; | ||||
|   } | ||||
|  | ||||
| }; | ||||
|  | ||||
| template<class Field, class CoarseField> | ||||
| class TwoLevelADEF2mrhs : public TwoLevelCGmrhs<Field> | ||||
| { | ||||
| public: | ||||
|   GridBase *coarsegrid; | ||||
|   GridBase *coarsegridmrhs; | ||||
|   LinearFunction<CoarseField> &_CoarseSolverMrhs; | ||||
|   LinearFunction<CoarseField> &_CoarseSolverPreciseMrhs; | ||||
|   MultiRHSBlockProject<Field>    &_Projector; | ||||
|   MultiRHSDeflation<CoarseField> &_Deflator; | ||||
|  | ||||
|    | ||||
|   TwoLevelADEF2mrhs(RealD tol, | ||||
| 		    Integer maxit, | ||||
| 		    LinearOperatorBase<Field>    &FineLinop, | ||||
| 		    LinearFunction<Field>        &Smoother, | ||||
| 		    LinearFunction<CoarseField>  &CoarseSolverMrhs, | ||||
| 		    LinearFunction<CoarseField>  &CoarseSolverPreciseMrhs, | ||||
| 		    MultiRHSBlockProject<Field>    &Projector, | ||||
| 		    MultiRHSDeflation<CoarseField> &Deflator, | ||||
| 		    GridBase *_coarsemrhsgrid) : | ||||
|     TwoLevelCGmrhs<Field>(tol, maxit,FineLinop,Smoother,Projector.fine_grid), | ||||
|     _CoarseSolverMrhs(CoarseSolverMrhs), | ||||
|     _CoarseSolverPreciseMrhs(CoarseSolverPreciseMrhs), | ||||
|     _Projector(Projector), | ||||
|     _Deflator(Deflator) | ||||
|   { | ||||
|     coarsegrid = Projector.coarse_grid; | ||||
|     coarsegridmrhs = _coarsemrhsgrid;// Thi could be in projector | ||||
|   }; | ||||
|  | ||||
|   // Override Vstart | ||||
|   virtual void Vstart(std::vector<Field> & x,std::vector<Field> & src) | ||||
|   { | ||||
|     int nrhs=x.size(); | ||||
|     /////////////////////////////////// | ||||
|     // Choose x_0 such that  | ||||
|     // x_0 = guess +  (A_ss^inv) r_s = guess + Ass_inv [src -Aguess] | ||||
|     //                               = [1 - Ass_inv A] Guess + Assinv src | ||||
|     //                               = P^T guess + Assinv src  | ||||
|     //                               = Vstart  [Tang notation] | ||||
|     // This gives: | ||||
|     // W^T (src - A x_0) = src_s - A guess_s - r_s | ||||
|     //                   = src_s - (A guess)_s - src_s  + (A guess)_s  | ||||
|     //                   = 0  | ||||
|     /////////////////////////////////// | ||||
|     std::vector<CoarseField> PleftProj(nrhs,this->coarsegrid); | ||||
|     std::vector<CoarseField> PleftMss_proj(nrhs,this->coarsegrid); | ||||
|     CoarseField PleftProjMrhs(this->coarsegridmrhs); | ||||
|     CoarseField PleftMss_projMrhs(this->coarsegridmrhs); | ||||
|  | ||||
|     this->_Projector.blockProject(src,PleftProj); | ||||
|     this->_Deflator.DeflateSources(PleftProj,PleftMss_proj); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       InsertSliceFast(PleftProj[rhs],PleftProjMrhs,rhs,0); | ||||
|       InsertSliceFast(PleftMss_proj[rhs],PleftMss_projMrhs,rhs,0); // the guess | ||||
|     } | ||||
|      | ||||
|     this->_CoarseSolverPreciseMrhs(PleftProjMrhs,PleftMss_projMrhs); // Ass^{-1} r_s | ||||
|  | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       ExtractSliceFast(PleftMss_proj[rhs],PleftMss_projMrhs,rhs,0); | ||||
|     } | ||||
|     this->_Projector.blockPromote(x,PleftMss_proj); | ||||
|   } | ||||
|  | ||||
|   virtual void PcgM1(std::vector<Field> & in,std::vector<Field> & out){ | ||||
|  | ||||
|     int nrhs=in.size(); | ||||
|  | ||||
|     // [PTM+Q] in = [1 - Q A] M in + Q in = Min + Q [ in -A Min] | ||||
|     std::vector<Field> tmp(nrhs,this->grid); | ||||
|     std::vector<Field> Min(nrhs,this->grid); | ||||
|  | ||||
|     std::vector<CoarseField> PleftProj(nrhs,this->coarsegrid); | ||||
|     std::vector<CoarseField> PleftMss_proj(nrhs,this->coarsegrid); | ||||
|  | ||||
|     CoarseField PleftProjMrhs(this->coarsegridmrhs); | ||||
|     CoarseField PleftMss_projMrhs(this->coarsegridmrhs); | ||||
|  | ||||
| #undef SMOOTHER_BLOCK_SOLVE | ||||
| #if SMOOTHER_BLOCK_SOLVE | ||||
|     this->SmoothTimer.Start(); | ||||
|     this->_Smoother(in,Min); | ||||
|     this->SmoothTimer.Stop(); | ||||
| #else | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       this->SmoothTimer.Start(); | ||||
|       this->_Smoother(in[rhs],Min[rhs]); | ||||
|       this->SmoothTimer.Stop(); | ||||
|     } | ||||
| #endif | ||||
|      | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|        | ||||
|       this->FineTimer.Start(); | ||||
|       this->_FineLinop.HermOp(Min[rhs],out[rhs]); | ||||
|       axpy(tmp[rhs],-1.0,out[rhs],in[rhs]);          // resid  = in - A Min | ||||
|       this->FineTimer.Stop(); | ||||
|  | ||||
|     } | ||||
|  | ||||
|     this->ProjectTimer.Start(); | ||||
|     this->_Projector.blockProject(tmp,PleftProj); | ||||
|     this->ProjectTimer.Stop(); | ||||
|     this->DeflateTimer.Start(); | ||||
|     this->_Deflator.DeflateSources(PleftProj,PleftMss_proj); | ||||
|     this->DeflateTimer.Stop(); | ||||
|     this->InsertTimer.Start(); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       InsertSliceFast(PleftProj[rhs],PleftProjMrhs,rhs,0); | ||||
|       InsertSliceFast(PleftMss_proj[rhs],PleftMss_projMrhs,rhs,0); // the guess | ||||
|     } | ||||
|     this->InsertTimer.Stop(); | ||||
|  | ||||
|     this->CoarseTimer.Start(); | ||||
|     this->_CoarseSolverMrhs(PleftProjMrhs,PleftMss_projMrhs); // Ass^{-1} [in - A Min]_s | ||||
|     this->CoarseTimer.Stop(); | ||||
|  | ||||
|     this->InsertTimer.Start(); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       ExtractSliceFast(PleftMss_proj[rhs],PleftMss_projMrhs,rhs,0); | ||||
|     } | ||||
|     this->InsertTimer.Stop(); | ||||
|     this->PromoteTimer.Start(); | ||||
|     this->_Projector.blockPromote(tmp,PleftMss_proj);// tmp= Q[in - A Min]   | ||||
|     this->PromoteTimer.Stop(); | ||||
|     this->FineTimer.Start(); | ||||
|     for(int rhs=0;rhs<nrhs;rhs++) { | ||||
|       axpy(out[rhs],1.0,Min[rhs],tmp[rhs]); // Min+tmp | ||||
|     } | ||||
|     this->FineTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
|  | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
							
								
								
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										234
									
								
								Grid/algorithms/iterative/BiCGSTAB.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,234 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/BiCGSTAB.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: juettner <juettner@soton.ac.uk> | ||||
| Author: David Murphy <djmurphy@mit.edu> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #ifndef GRID_BICGSTAB_H | ||||
| #define GRID_BICGSTAB_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
| template <class Field> | ||||
| class BiCGSTAB : public OperatorFunction<Field>  | ||||
| { | ||||
|   public: | ||||
|     using OperatorFunction<Field>::operator(); | ||||
|      | ||||
|     bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||
|                              // Defaults true. | ||||
|     RealD Tolerance; | ||||
|     Integer MaxIterations; | ||||
|     Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|    | ||||
|     BiCGSTAB(RealD tol, Integer maxit, bool err_on_no_conv = true) :  | ||||
|       Tolerance(tol), MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv){}; | ||||
|  | ||||
|     void operator()(LinearOperatorBase<Field>& Linop, const Field& src, Field& psi)  | ||||
|     { | ||||
|       psi.Checkerboard() = src.Checkerboard(); | ||||
|       conformable(psi, src); | ||||
|  | ||||
|       RealD cp(0), rho(1), rho_prev(0), alpha(1), beta(0), omega(1); | ||||
|       RealD a(0), bo(0), b(0), ssq(0); | ||||
|  | ||||
|       Field p(src); | ||||
|       Field r(src); | ||||
|       Field rhat(src); | ||||
|       Field v(src); | ||||
|       Field s(src); | ||||
|       Field t(src); | ||||
|       Field h(src); | ||||
|  | ||||
|       v = Zero(); | ||||
|       p = Zero(); | ||||
|  | ||||
|       // Initial residual computation & set up | ||||
|       RealD guess = norm2(psi); | ||||
|       assert(std::isnan(guess) == 0); | ||||
|      | ||||
|       Linop.Op(psi, v); | ||||
|       b = norm2(v); | ||||
|  | ||||
|       r = src - v; | ||||
|       rhat = r; | ||||
|       a = norm2(r); | ||||
|       ssq = norm2(src); | ||||
|  | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: guess " << guess << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:   src " << ssq << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:    mp " << b << std::endl; | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB:     r " << a << std::endl; | ||||
|  | ||||
|       RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|       // Check if guess is really REALLY good :) | ||||
|       if(a <= rsq){ return; } | ||||
|  | ||||
|       std::cout << GridLogIterative << std::setprecision(8) << "BiCGSTAB: k=0 residual " << a << " target " << rsq << std::endl; | ||||
|  | ||||
|       GridStopWatch LinalgTimer; | ||||
|       GridStopWatch InnerTimer; | ||||
|       GridStopWatch AxpyNormTimer; | ||||
|       GridStopWatch LinearCombTimer; | ||||
|       GridStopWatch MatrixTimer; | ||||
|       GridStopWatch SolverTimer; | ||||
|  | ||||
|       SolverTimer.Start(); | ||||
|       int k; | ||||
|       for (k = 1; k <= MaxIterations; k++)  | ||||
|       { | ||||
|         rho_prev = rho; | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Crho  = innerProduct(rhat,r); | ||||
|         InnerTimer.Stop(); | ||||
|         rho = Crho.real(); | ||||
|  | ||||
|         beta = (rho / rho_prev) * (alpha / omega); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
|         bo = beta * omega; | ||||
| 	{ | ||||
| 	  autoView( p_v , p, AcceleratorWrite); | ||||
| 	  autoView( r_v , r, AcceleratorRead); | ||||
| 	  autoView( v_v , v, AcceleratorRead); | ||||
| 	  accelerator_for(ss, p_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(p_v[ss], beta*p_v(ss) - bo*v_v(ss) + r_v(ss)); | ||||
| 	    }); | ||||
| 	} | ||||
|         LinearCombTimer.Stop(); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         MatrixTimer.Start(); | ||||
|         Linop.Op(p,v); | ||||
|         MatrixTimer.Stop(); | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Calpha = innerProduct(rhat,v); | ||||
|         InnerTimer.Stop(); | ||||
|         alpha = rho / Calpha.real(); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
| 	{ | ||||
| 	  autoView( p_v , p, AcceleratorRead); | ||||
| 	  autoView( r_v , r, AcceleratorRead); | ||||
| 	  autoView( v_v , v, AcceleratorRead); | ||||
| 	  autoView( psi_v,psi, AcceleratorRead); | ||||
| 	  autoView( h_v  ,  h, AcceleratorWrite); | ||||
| 	  autoView( s_v  ,  s, AcceleratorWrite); | ||||
| 	  accelerator_for(ss, h_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(h_v[ss], alpha*p_v(ss) + psi_v(ss)); | ||||
| 	    }); | ||||
| 	  accelerator_for(ss, s_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(s_v[ss], -alpha*v_v(ss) + r_v(ss)); | ||||
|  	  }); | ||||
|         } | ||||
|         LinearCombTimer.Stop(); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         MatrixTimer.Start(); | ||||
|         Linop.Op(s,t); | ||||
|         MatrixTimer.Stop(); | ||||
|  | ||||
|         LinalgTimer.Start(); | ||||
|         InnerTimer.Start(); | ||||
|         ComplexD Comega = innerProduct(t,s); | ||||
|         InnerTimer.Stop(); | ||||
|         omega = Comega.real() / norm2(t); | ||||
|  | ||||
|         LinearCombTimer.Start(); | ||||
| 	{ | ||||
| 	  autoView( psi_v,psi, AcceleratorWrite); | ||||
| 	  autoView( r_v , r, AcceleratorWrite); | ||||
| 	  autoView( h_v , h, AcceleratorRead); | ||||
| 	  autoView( s_v , s, AcceleratorRead); | ||||
| 	  autoView( t_v , t, AcceleratorRead); | ||||
| 	  accelerator_for(ss, psi_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	      coalescedWrite(psi_v[ss], h_v(ss) + omega * s_v(ss)); | ||||
| 	      coalescedWrite(r_v[ss], -omega * t_v(ss) + s_v(ss)); | ||||
| 	    }); | ||||
| 	} | ||||
|         LinearCombTimer.Stop(); | ||||
| 	 | ||||
|         cp = norm2(r); | ||||
|         LinalgTimer.Stop(); | ||||
|  | ||||
|         std::cout << GridLogIterative << "BiCGSTAB: Iteration " << k << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||
|  | ||||
|         // Stopping condition | ||||
|         if(cp <= rsq)  | ||||
|         { | ||||
|           SolverTimer.Stop(); | ||||
|           Linop.Op(psi, v); | ||||
|           p = v - src; | ||||
|  | ||||
|           RealD srcnorm = sqrt(norm2(src)); | ||||
|           RealD resnorm = sqrt(norm2(p)); | ||||
|           RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|           std::cout << GridLogMessage << "BiCGSTAB Converged on iteration " << k << std::endl; | ||||
|           std::cout << GridLogMessage << "\tComputed residual " << sqrt(cp/ssq) << std::endl; | ||||
|           std::cout << GridLogMessage << "\tTrue residual " << true_residual << std::endl; | ||||
|           std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||
|  | ||||
|           std::cout << GridLogMessage << "Time breakdown " << std::endl; | ||||
|           std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tInner      " << InnerTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tAxpyNorm   " << AxpyNormTimer.Elapsed() << std::endl; | ||||
|           std::cout << GridLogMessage << "\tLinearComb " << LinearCombTimer.Elapsed() << std::endl; | ||||
|  | ||||
|           if(ErrorOnNoConverge){ assert(true_residual / Tolerance < 10000.0); } | ||||
|  | ||||
|           IterationsToComplete = k;	 | ||||
|  | ||||
|           return; | ||||
|         } | ||||
|       } | ||||
|        | ||||
|       std::cout << GridLogMessage << "BiCGSTAB did NOT converge" << std::endl; | ||||
|  | ||||
|       if(ErrorOnNoConverge){ assert(0); } | ||||
|       IterationsToComplete = k; | ||||
|     } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										159
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										159
									
								
								Grid/algorithms/iterative/BiCGSTABMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,159 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/BiCGSTABMixedPrec.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
| Author: David Murphy <djmurphy@mit.edu> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #ifndef GRID_BICGSTAB_MIXED_PREC_H | ||||
| #define GRID_BICGSTAB_MIXED_PREC_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Mixed precision restarted defect correction BiCGSTAB | ||||
| template<class FieldD, class FieldF, typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class MixedPrecisionBiCGSTAB : public LinearFunction<FieldD>  | ||||
| { | ||||
|   public: | ||||
|     using LinearFunction<FieldD>::operator(); | ||||
|     RealD   Tolerance; | ||||
|     RealD   InnerTolerance; // Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|     Integer MaxInnerIterations; | ||||
|     Integer MaxOuterIterations; | ||||
|     GridBase* SinglePrecGrid; // Grid for single-precision fields | ||||
|     RealD OuterLoopNormMult; // Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||
|     LinearOperatorBase<FieldF> &Linop_f; | ||||
|     LinearOperatorBase<FieldD> &Linop_d; | ||||
|  | ||||
|     Integer TotalInnerIterations; //Number of inner CG iterations | ||||
|     Integer TotalOuterIterations; //Number of restarts | ||||
|     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||
|  | ||||
|     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|     LinearFunction<FieldF> *guesser; | ||||
|      | ||||
|     MixedPrecisionBiCGSTAB(RealD tol, Integer maxinnerit, Integer maxouterit, GridBase* _sp_grid,  | ||||
|         LinearOperatorBase<FieldF>& _Linop_f, LinearOperatorBase<FieldD>& _Linop_d) :  | ||||
|       Linop_f(_Linop_f), Linop_d(_Linop_d), Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit),  | ||||
|       MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), OuterLoopNormMult(100.), guesser(NULL) {}; | ||||
|  | ||||
|     void useGuesser(LinearFunction<FieldF>& g){ | ||||
|       guesser = &g; | ||||
|     } | ||||
|    | ||||
|     void operator() (const FieldD& src_d_in, FieldD& sol_d) | ||||
|     { | ||||
|       TotalInnerIterations = 0; | ||||
|      | ||||
|       GridStopWatch TotalTimer; | ||||
|       TotalTimer.Start(); | ||||
|        | ||||
|       int cb = src_d_in.Checkerboard(); | ||||
|       sol_d.Checkerboard() = cb; | ||||
|        | ||||
|       RealD src_norm = norm2(src_d_in); | ||||
|       RealD stop = src_norm * Tolerance*Tolerance; | ||||
|  | ||||
|       GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||
|       FieldD tmp_d(DoublePrecGrid); | ||||
|       tmp_d.Checkerboard() = cb; | ||||
|        | ||||
|       FieldD tmp2_d(DoublePrecGrid); | ||||
|       tmp2_d.Checkerboard() = cb; | ||||
|        | ||||
|       FieldD src_d(DoublePrecGrid); | ||||
|       src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||
|        | ||||
|       RealD inner_tol = InnerTolerance; | ||||
|        | ||||
|       FieldF src_f(SinglePrecGrid); | ||||
|       src_f.Checkerboard() = cb; | ||||
|        | ||||
|       FieldF sol_f(SinglePrecGrid); | ||||
|       sol_f.Checkerboard() = cb; | ||||
|        | ||||
|       BiCGSTAB<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|       CG_f.ErrorOnNoConverge = false; | ||||
|  | ||||
|       GridStopWatch InnerCGtimer; | ||||
|  | ||||
|       GridStopWatch PrecChangeTimer; | ||||
|        | ||||
|       Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|          | ||||
|       for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++) | ||||
|       { | ||||
|         // Compute double precision rsd and also new RHS vector. | ||||
|         Linop_d.Op(sol_d, tmp_d); | ||||
|         RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector | ||||
|          | ||||
|         std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration " << outer_iter << " residual " << norm << " target " << stop << std::endl; | ||||
|  | ||||
|         if(norm < OuterLoopNormMult * stop){ | ||||
|           std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Outer iteration converged on iteration " << outer_iter << std::endl; | ||||
|           break; | ||||
|         } | ||||
|         while(norm * inner_tol * inner_tol < stop){ inner_tol *= 2; } // inner_tol = sqrt(stop/norm) ?? | ||||
|  | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(src_f, src_d); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         sol_f = Zero(); | ||||
|  | ||||
|         //Optionally improve inner solver guess (eg using known eigenvectors) | ||||
|         if(guesser != NULL){ (*guesser)(src_f, sol_f); } | ||||
|  | ||||
|         //Inner CG | ||||
|         CG_f.Tolerance = inner_tol; | ||||
|         InnerCGtimer.Start(); | ||||
|         CG_f(Linop_f, src_f, sol_f); | ||||
|         InnerCGtimer.Stop(); | ||||
|         TotalInnerIterations += CG_f.IterationsToComplete; | ||||
|          | ||||
|         //Convert sol back to double and add to double prec solution | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(tmp_d, sol_f); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         axpy(sol_d, 1.0, tmp_d, sol_d); | ||||
|       } | ||||
|        | ||||
|       //Final trial CG | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Starting final patch-up double-precision solve" << std::endl; | ||||
|        | ||||
|       BiCGSTAB<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||
|       CG_d(Linop_d, src_d_in, sol_d); | ||||
|       TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||
|  | ||||
|       TotalTimer.Stop(); | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||
|       std::cout << GridLogMessage << "MixedPrecisionBiCGSTAB: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
| @@ -27,13 +27,63 @@ See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_BLOCK_CONJUGATE_GRADIENT_H | ||||
| #define GRID_BLOCK_CONJUGATE_GRADIENT_H | ||||
| #pragma once | ||||
| 
 | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| template<class Field> | ||||
| void InnerProductMatrix(Eigen::MatrixXcd &m , const std::vector<Field> &X, const std::vector<Field> &Y){ | ||||
|   typedef typename Field::scalar_type scomplex; | ||||
|   int Nblock = X.size(); | ||||
|   for(int b=0;b<Nblock;b++){ | ||||
|   for(int bp=0;bp<Nblock;bp++) { | ||||
|     m(b,bp) = innerProduct(X[b],Y[bp]);   | ||||
|   }} | ||||
| } | ||||
| template<class Field> | ||||
| void MaddMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector<Field> &X,const std::vector<Field> &Y,RealD scale=1.0){ | ||||
|   // Should make this cache friendly with site outermost, parallel_for
 | ||||
|   // Deal with case AP aliases with either Y or X
 | ||||
|   //
 | ||||
|   //Could pack "X" and "AP" into a Nblock x Volume dense array.
 | ||||
|   // AP(Nrhs x vol) = Y(Nrhs x vol) + scale * m(nrhs x nrhs) * X(nrhs*vol)
 | ||||
|   typedef typename Field::scalar_type scomplex; | ||||
|   int Nblock = AP.size(); | ||||
|   std::vector<Field> tmp(Nblock,X[0]); | ||||
|   for(int b=0;b<Nblock;b++){ | ||||
|     tmp[b]   = Y[b]; | ||||
|     for(int bp=0;bp<Nblock;bp++) { | ||||
|       tmp[b] = tmp[b] +scomplex(scale*m(bp,b))*X[bp];  | ||||
|     } | ||||
|   } | ||||
|   for(int b=0;b<Nblock;b++){ | ||||
|     AP[b] = tmp[b]; | ||||
|   } | ||||
| } | ||||
| template<class Field> | ||||
| void MulMatrix(std::vector<Field> &AP, Eigen::MatrixXcd &m , const std::vector<Field> &X){ | ||||
|   // Should make this cache friendly with site outermost, parallel_for
 | ||||
|   typedef typename Field::scalar_type scomplex; | ||||
|   int Nblock = AP.size(); | ||||
|   for(int b=0;b<Nblock;b++){ | ||||
|     AP[b] = Zero(); | ||||
|     for(int bp=0;bp<Nblock;bp++) { | ||||
|       AP[b] += scomplex(m(bp,b))*X[bp];  | ||||
|     } | ||||
|   } | ||||
| } | ||||
| template<class Field> | ||||
| double normv(const std::vector<Field> &P){ | ||||
|   int Nblock = P.size(); | ||||
|   double nn = 0.0; | ||||
|   for(int b=0;b<Nblock;b++) { | ||||
|     nn+=norm2(P[b]); | ||||
|   } | ||||
|   return nn; | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| namespace Grid { | ||||
| 
 | ||||
| enum BlockCGtype { BlockCG, BlockCGrQ, CGmultiRHS }; | ||||
| enum BlockCGtype { BlockCG, BlockCGrQ, CGmultiRHS, BlockCGVec, BlockCGrQVec }; | ||||
| 
 | ||||
| //////////////////////////////////////////////////////////////////////////
 | ||||
| // Block conjugate gradient. Dimension zero should be the block direction
 | ||||
| @@ -42,7 +92,6 @@ template <class Field> | ||||
| class BlockConjugateGradient : public OperatorFunction<Field> { | ||||
|  public: | ||||
| 
 | ||||
| 
 | ||||
|   typedef typename Field::scalar_type scomplex; | ||||
| 
 | ||||
|   int blockDim ; | ||||
| @@ -54,21 +103,16 @@ class BlockConjugateGradient : public OperatorFunction<Field> { | ||||
|   RealD Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion
 | ||||
|   Integer PrintInterval; //GridLogMessages or Iterative
 | ||||
|   RealD TrueResidual; | ||||
|    | ||||
|   BlockConjugateGradient(BlockCGtype cgtype,int _Orthog,RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv) | ||||
|     : Tolerance(tol), CGtype(cgtype),   blockDim(_Orthog),  MaxIterations(maxit), ErrorOnNoConverge(err_on_no_conv),PrintInterval(100) | ||||
|   {}; | ||||
| 
 | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| // Thin QR factorisation (google it)
 | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| void ThinQRfact (Eigen::MatrixXcd &m_rr, | ||||
| 		 Eigen::MatrixXcd &C, | ||||
| 		 Eigen::MatrixXcd &Cinv, | ||||
| 		 Field & Q, | ||||
| 		 const Field & R) | ||||
| { | ||||
|   int Orthog = blockDim; // First dimension is block dim; this is an assumption
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   //Dimensions
 | ||||
|   // R_{ferm x Nblock} =  Q_{ferm x Nblock} x  C_{Nblock x Nblock} -> ferm x Nblock
 | ||||
| @@ -85,17 +129,31 @@ void ThinQRfact (Eigen::MatrixXcd &m_rr, | ||||
|   // Cdag C = Rdag R ; passes.
 | ||||
|   // QdagQ  = 1      ; passes
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| void ThinQRfact (Eigen::MatrixXcd &m_rr, | ||||
| 		 Eigen::MatrixXcd &C, | ||||
| 		 Eigen::MatrixXcd &Cinv, | ||||
| 		 Field & Q, | ||||
| 		 const Field & R) | ||||
| { | ||||
|   int Orthog = blockDim; // First dimension is block dim; this is an assumption
 | ||||
|   sliceInnerProductMatrix(m_rr,R,R,Orthog); | ||||
| 
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // Cholesky from Eigen
 | ||||
|   // There exists a ldlt that is documented as more stable
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // Force manifest hermitian to avoid rounding related
 | ||||
|   /*
 | ||||
|   int rank=m_rr.rows(); | ||||
|   for(int r=0;r<rank;r++){ | ||||
|   for(int s=0;s<rank;s++){ | ||||
|     std::cout << "QR m_rr["<<r<<","<<s<<"] "<<m_rr(r,s)<<std::endl; | ||||
|   }} | ||||
|   */ | ||||
|   m_rr = 0.5*(m_rr+m_rr.adjoint()); | ||||
| 
 | ||||
|   Eigen::MatrixXcd L    = m_rr.llt().matrixL();  | ||||
| 
 | ||||
| //  ComplexD det = L.determinant();
 | ||||
| //  std::cout << " Det m_rr "<<det<<std::endl;
 | ||||
|   C    = L.adjoint(); | ||||
|   Cinv = C.inverse(); | ||||
| 
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // Q = R C^{-1}
 | ||||
|   //
 | ||||
| @@ -103,9 +161,36 @@ void ThinQRfact (Eigen::MatrixXcd &m_rr, | ||||
|   //
 | ||||
|   // NB maddMatrix conventions are Right multiplication X[j] a[j,i] already
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // FIXME:: make a sliceMulMatrix to avoid zero vector
 | ||||
|   sliceMulMatrix(Q,Cinv,R,Orthog); | ||||
| } | ||||
| // see comments above
 | ||||
| void ThinQRfact (Eigen::MatrixXcd &m_rr, | ||||
| 		 Eigen::MatrixXcd &C, | ||||
| 		 Eigen::MatrixXcd &Cinv, | ||||
| 		 std::vector<Field> & Q, | ||||
| 		 const std::vector<Field> & R) | ||||
| { | ||||
|   InnerProductMatrix(m_rr,R,R); | ||||
|   /*
 | ||||
|   int rank=m_rr.rows(); | ||||
|   for(int r=0;r<rank;r++){ | ||||
|   for(int s=0;s<rank;s++){ | ||||
|     std::cout << "QRvec m_rr["<<r<<","<<s<<"] "<<m_rr(r,s)<<std::endl; | ||||
|   }} | ||||
|   */ | ||||
|   m_rr = 0.5*(m_rr+m_rr.adjoint()); | ||||
| 
 | ||||
|   Eigen::MatrixXcd L    = m_rr.llt().matrixL();  | ||||
| 
 | ||||
|   //  ComplexD det = L.determinant();
 | ||||
|   //  std::cout << " Det m_rr "<<det<<std::endl;
 | ||||
| 
 | ||||
|   C    = L.adjoint(); | ||||
|   Cinv = C.inverse(); | ||||
| 
 | ||||
|   MulMatrix(Q,Cinv,R); | ||||
| } | ||||
| 
 | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| // Call one of several implementations
 | ||||
| ////////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| @@ -113,14 +198,20 @@ void operator()(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi) | ||||
| { | ||||
|   if ( CGtype == BlockCGrQ ) { | ||||
|     BlockCGrQsolve(Linop,Src,Psi); | ||||
|   } else if (CGtype == BlockCG ) { | ||||
|     BlockCGsolve(Linop,Src,Psi); | ||||
|   } else if (CGtype == CGmultiRHS ) { | ||||
|     CGmultiRHSsolve(Linop,Src,Psi); | ||||
|   } else { | ||||
|     assert(0); | ||||
|   } | ||||
| } | ||||
| virtual void operator()(LinearOperatorBase<Field> &Linop, const std::vector<Field> &Src, std::vector<Field> &Psi)  | ||||
| { | ||||
|   if ( CGtype == BlockCGrQVec ) { | ||||
|     BlockCGrQsolveVec(Linop,Src,Psi); | ||||
|   } else { | ||||
|     assert(0); | ||||
|   } | ||||
| } | ||||
| 
 | ||||
| ////////////////////////////////////////////////////////////////////////////
 | ||||
| // BlockCGrQ implementation:
 | ||||
| @@ -132,11 +223,12 @@ void operator()(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi) | ||||
| void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X)  | ||||
| { | ||||
|   int Orthog = blockDim; // First dimension is block dim; this is an assumption
 | ||||
|   Nblock = B._grid->_fdimensions[Orthog]; | ||||
| 
 | ||||
|   Nblock = B.Grid()->_fdimensions[Orthog]; | ||||
| /* FAKE */ | ||||
|   Nblock=8; | ||||
|   std::cout<<GridLogMessage<<" Block Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; | ||||
| 
 | ||||
|   X.checkerboard = B.checkerboard; | ||||
|   X.Checkerboard() = B.Checkerboard(); | ||||
|   conformable(X, B); | ||||
| 
 | ||||
|   Field tmp(B); | ||||
| @@ -164,6 +256,7 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|   sliceNorm(ssq,B,Orthog); | ||||
|   RealD sssum=0; | ||||
|   for(int b=0;b<Nblock;b++) sssum+=ssq[b]; | ||||
|   for(int b=0;b<Nblock;b++) std::cout << "src["<<b<<"]" << ssq[b] <<std::endl; | ||||
| 
 | ||||
|   sliceNorm(residuals,B,Orthog); | ||||
|   for(int b=0;b<Nblock;b++){ assert(std::isnan(residuals[b])==0); } | ||||
| @@ -196,15 +289,13 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|   std::cout << GridLogMessage<<"BlockCGrQ algorithm initialisation " <<std::endl; | ||||
| 
 | ||||
|   //1.  QC = R = B-AX, D = Q     ; QC => Thin QR factorisation (google it)
 | ||||
| 
 | ||||
|   Linop.HermOp(X, AD); | ||||
|   tmp = B - AD;   | ||||
|   //std::cout << GridLogMessage << " initial tmp " << norm2(tmp)<< std::endl;
 | ||||
| 
 | ||||
|   sliceNorm(residuals,tmp,Orthog); | ||||
|   for(int b=0;b<Nblock;b++) std::cout << "res["<<b<<"]" << residuals[b] <<std::endl; | ||||
|    | ||||
|   ThinQRfact (m_rr, m_C, m_Cinv, Q, tmp); | ||||
|   //std::cout << GridLogMessage << " initial Q " << norm2(Q)<< std::endl;
 | ||||
|   //std::cout << GridLogMessage << " m_rr " << m_rr<<std::endl;
 | ||||
|   //std::cout << GridLogMessage << " m_C " << m_C<<std::endl;
 | ||||
|   //std::cout << GridLogMessage << " m_Cinv " << m_Cinv<<std::endl;
 | ||||
|   D=Q; | ||||
| 
 | ||||
|   std::cout << GridLogMessage<<"BlockCGrQ computed initial residual and QR fact " <<std::endl; | ||||
| @@ -219,6 +310,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|   GridStopWatch SolverTimer; | ||||
|   SolverTimer.Start(); | ||||
| 
 | ||||
|   RealD max_resid=0; | ||||
| 
 | ||||
|   int k; | ||||
|   for (k = 1; k <= MaxIterations; k++) { | ||||
| 
 | ||||
| @@ -226,14 +319,12 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|     MatrixTimer.Start(); | ||||
|     Linop.HermOp(D, Z);       | ||||
|     MatrixTimer.Stop(); | ||||
|     //std::cout << GridLogMessage << " norm2 Z " <<norm2(Z)<<std::endl;
 | ||||
| 
 | ||||
|     //4. M  = [D^dag Z]^{-1}
 | ||||
|     sliceInnerTimer.Start(); | ||||
|     sliceInnerProductMatrix(m_DZ,D,Z,Orthog); | ||||
|     sliceInnerTimer.Stop(); | ||||
|     m_M       = m_DZ.inverse(); | ||||
|     //std::cout << GridLogMessage << " m_DZ " <<m_DZ<<std::endl;
 | ||||
|      | ||||
|     //5. X  = X + D MC
 | ||||
|     m_tmp     = m_M * m_C; | ||||
| @@ -251,6 +342,7 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|      | ||||
|     //7. D  = Q + D S^dag
 | ||||
|     m_tmp = m_S.adjoint(); | ||||
| 
 | ||||
|     sliceMaddTimer.Start(); | ||||
|     sliceMaddMatrix(D,m_tmp,D,Q,Orthog); | ||||
|     sliceMaddTimer.Stop(); | ||||
| @@ -264,7 +356,7 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|      */ | ||||
|     m_rr = m_C.adjoint() * m_C; | ||||
| 
 | ||||
|     RealD max_resid=0; | ||||
|     max_resid=0; | ||||
|     RealD rrsum=0; | ||||
|     RealD rr; | ||||
| 
 | ||||
| @@ -291,7 +383,8 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
| 
 | ||||
|       Linop.HermOp(X, AD); | ||||
|       AD = AD-B; | ||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AD)/norm2(B)) <<std::endl; | ||||
|       TrueResidual = std::sqrt(norm2(AD)/norm2(B)); | ||||
|       std::cout << GridLogMessage <<"\tTrue residual is " << TrueResidual <<std::endl; | ||||
| 
 | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| @@ -305,153 +398,9 @@ void BlockCGrQsolve(LinearOperatorBase<Field> &Linop, const Field &B, Field &X) | ||||
|     } | ||||
| 
 | ||||
|   } | ||||
|   std::cout << GridLogMessage << "BlockConjugateGradient(rQ) did NOT converge" << std::endl; | ||||
| 
 | ||||
|   if (ErrorOnNoConverge) assert(0); | ||||
|   IterationsToComplete = k; | ||||
| } | ||||
| //////////////////////////////////////////////////////////////////////////
 | ||||
| // Block conjugate gradient; Original O'Leary Dimension zero should be the block direction
 | ||||
| //////////////////////////////////////////////////////////////////////////
 | ||||
| void BlockCGsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi)  | ||||
| { | ||||
|   int Orthog = blockDim; // First dimension is block dim; this is an assumption
 | ||||
|   Nblock = Src._grid->_fdimensions[Orthog]; | ||||
| 
 | ||||
|   std::cout<<GridLogMessage<<" Block Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; | ||||
| 
 | ||||
|   Psi.checkerboard = Src.checkerboard; | ||||
|   conformable(Psi, Src); | ||||
| 
 | ||||
|   Field P(Src); | ||||
|   Field AP(Src); | ||||
|   Field R(Src); | ||||
|    | ||||
|   Eigen::MatrixXcd m_pAp    = Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_pAp_inv= Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_rr     = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_rr_inv = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
| 
 | ||||
|   Eigen::MatrixXcd m_alpha      = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_beta   = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
| 
 | ||||
|   // Initial residual computation & set up
 | ||||
|   std::vector<RealD> residuals(Nblock); | ||||
|   std::vector<RealD> ssq(Nblock); | ||||
| 
 | ||||
|   sliceNorm(ssq,Src,Orthog); | ||||
|   RealD sssum=0; | ||||
|   for(int b=0;b<Nblock;b++) sssum+=ssq[b]; | ||||
| 
 | ||||
|   sliceNorm(residuals,Src,Orthog); | ||||
|   for(int b=0;b<Nblock;b++){ assert(std::isnan(residuals[b])==0); } | ||||
| 
 | ||||
|   sliceNorm(residuals,Psi,Orthog); | ||||
|   for(int b=0;b<Nblock;b++){ assert(std::isnan(residuals[b])==0); } | ||||
| 
 | ||||
|   // Initial search dir is guess
 | ||||
|   Linop.HermOp(Psi, AP); | ||||
|    | ||||
| 
 | ||||
|   /************************************************************************
 | ||||
|    * Block conjugate gradient (Stephen Pickles, thesis 1995, pp 71, O Leary 1980) | ||||
|    ************************************************************************ | ||||
|    * O'Leary : R = B - A X | ||||
|    * O'Leary : P = M R ; preconditioner M = 1 | ||||
|    * O'Leary : alpha = PAP^{-1} RMR | ||||
|    * O'Leary : beta  = RMR^{-1}_old RMR_new | ||||
|    * O'Leary : X=X+Palpha | ||||
|    * O'Leary : R_new=R_old-AP alpha | ||||
|    * O'Leary : P=MR_new+P beta | ||||
|    */ | ||||
| 
 | ||||
|   R = Src - AP;   | ||||
|   P = R; | ||||
|   sliceInnerProductMatrix(m_rr,R,R,Orthog); | ||||
| 
 | ||||
|   GridStopWatch sliceInnerTimer; | ||||
|   GridStopWatch sliceMaddTimer; | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch SolverTimer; | ||||
|   SolverTimer.Start(); | ||||
| 
 | ||||
|   int k; | ||||
|   for (k = 1; k <= MaxIterations; k++) { | ||||
| 
 | ||||
|     RealD rrsum=0; | ||||
|     for(int b=0;b<Nblock;b++) rrsum+=real(m_rr(b,b)); | ||||
| 
 | ||||
|     std::cout << GridLogIterative << "\titeration "<<k<<" rr_sum "<<rrsum<<" ssq_sum "<< sssum | ||||
| 	      <<" / "<<std::sqrt(rrsum/sssum) <<std::endl; | ||||
| 
 | ||||
|     MatrixTimer.Start(); | ||||
|     Linop.HermOp(P, AP); | ||||
|     MatrixTimer.Stop(); | ||||
| 
 | ||||
|     // Alpha
 | ||||
|     sliceInnerTimer.Start(); | ||||
|     sliceInnerProductMatrix(m_pAp,P,AP,Orthog); | ||||
|     sliceInnerTimer.Stop(); | ||||
|     m_pAp_inv = m_pAp.inverse(); | ||||
|     m_alpha   = m_pAp_inv * m_rr ; | ||||
| 
 | ||||
|     // Psi, R update
 | ||||
|     sliceMaddTimer.Start(); | ||||
|     sliceMaddMatrix(Psi,m_alpha, P,Psi,Orthog);     // add alpha *  P to psi
 | ||||
|     sliceMaddMatrix(R  ,m_alpha,AP,  R,Orthog,-1.0);// sub alpha * AP to resid
 | ||||
|     sliceMaddTimer.Stop(); | ||||
| 
 | ||||
|     // Beta
 | ||||
|     m_rr_inv = m_rr.inverse(); | ||||
|     sliceInnerTimer.Start(); | ||||
|     sliceInnerProductMatrix(m_rr,R,R,Orthog); | ||||
|     sliceInnerTimer.Stop(); | ||||
|     m_beta = m_rr_inv *m_rr; | ||||
| 
 | ||||
|     // Search update
 | ||||
|     sliceMaddTimer.Start(); | ||||
|     sliceMaddMatrix(AP,m_beta,P,R,Orthog); | ||||
|     sliceMaddTimer.Stop(); | ||||
|     P= AP; | ||||
| 
 | ||||
|     /*********************
 | ||||
|      * convergence monitor | ||||
|      ********************* | ||||
|      */ | ||||
|     RealD max_resid=0; | ||||
|     RealD rr; | ||||
|     for(int b=0;b<Nblock;b++){ | ||||
|       rr = real(m_rr(b,b))/ssq[b]; | ||||
|       if ( rr > max_resid ) max_resid = rr; | ||||
|     } | ||||
|      | ||||
|     if ( max_resid < Tolerance*Tolerance ) {  | ||||
| 
 | ||||
|       SolverTimer.Stop(); | ||||
| 
 | ||||
|       std::cout << GridLogMessage<<"BlockCG converged in "<<k<<" iterations"<<std::endl; | ||||
|       for(int b=0;b<Nblock;b++){ | ||||
| 	std::cout << GridLogMessage<< "\t\tblock "<<b<<" computed resid " | ||||
| 		  << std::sqrt(real(m_rr(b,b))/ssq[b])<<std::endl; | ||||
|       } | ||||
|       std::cout << GridLogMessage<<"\tMax residual is "<<std::sqrt(max_resid)<<std::endl; | ||||
| 
 | ||||
|       Linop.HermOp(Psi, AP); | ||||
|       AP = AP-Src; | ||||
|       std::cout << GridLogMessage <<"\t True residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl; | ||||
| 
 | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tInnerProd  " << sliceInnerTimer.Elapsed() <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMaddMatrix " << sliceMaddTimer.Elapsed()  <<std::endl; | ||||
| 	     | ||||
|       IterationsToComplete = k; | ||||
|       return; | ||||
|     } | ||||
| 
 | ||||
|   } | ||||
|   std::cout << GridLogMessage << "BlockConjugateGradient did NOT converge" << std::endl; | ||||
|   std::cout << GridLogMessage << "BlockConjugateGradient(rQ) did NOT converge "<<k<<" / "<<MaxIterations | ||||
| 	    <<" residual "<< std::sqrt(max_resid)<< std::endl; | ||||
| 
 | ||||
|   if (ErrorOnNoConverge) assert(0); | ||||
|   IterationsToComplete = k; | ||||
| @@ -463,11 +412,11 @@ void BlockCGsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi | ||||
| void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field &Psi)  | ||||
| { | ||||
|   int Orthog = blockDim; // First dimension is block dim
 | ||||
|   Nblock = Src._grid->_fdimensions[Orthog]; | ||||
|   Nblock = Src.Grid()->_fdimensions[Orthog]; | ||||
| 
 | ||||
|   std::cout<<GridLogMessage<<"MultiRHS Conjugate Gradient : Orthog "<<Orthog<<" Nblock "<<Nblock<<std::endl; | ||||
| 
 | ||||
|   Psi.checkerboard = Src.checkerboard; | ||||
|   Psi.Checkerboard() = Src.Checkerboard(); | ||||
|   conformable(Psi, Src); | ||||
| 
 | ||||
|   Field P(Src); | ||||
| @@ -573,7 +522,8 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field & | ||||
| 
 | ||||
|       Linop.HermOp(Psi, AP); | ||||
|       AP = AP-Src; | ||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << std::sqrt(norm2(AP)/norm2(Src)) <<std::endl; | ||||
|       TrueResidual = std::sqrt(norm2(AP)/norm2(Src)); | ||||
|       std::cout <<GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||
| 
 | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| @@ -594,7 +544,198 @@ void CGmultiRHSsolve(LinearOperatorBase<Field> &Linop, const Field &Src, Field & | ||||
|   IterationsToComplete = k; | ||||
| } | ||||
| 
 | ||||
| ////////////////////////////////////////////////////////////////////////////
 | ||||
| // BlockCGrQvec implementation:
 | ||||
| //--------------------------
 | ||||
| // X is guess/Solution
 | ||||
| // B is RHS
 | ||||
| // Solve A X_i = B_i    ;        i refers to Nblock index
 | ||||
| ////////////////////////////////////////////////////////////////////////////
 | ||||
| void BlockCGrQsolveVec(LinearOperatorBase<Field> &Linop, const std::vector<Field> &B, std::vector<Field> &X)  | ||||
| { | ||||
|   Nblock = B.size(); | ||||
|   assert(Nblock == X.size()); | ||||
| 
 | ||||
|   std::cout<<GridLogMessage<<" Block Conjugate Gradient Vec rQ : Nblock "<<Nblock<<std::endl; | ||||
| 
 | ||||
|   for(int b=0;b<Nblock;b++){  | ||||
|     X[b].Checkerboard() = B[b].Checkerboard(); | ||||
|     conformable(X[b], B[b]); | ||||
|     conformable(X[b], X[0]);  | ||||
|   } | ||||
| 
 | ||||
|   Field Fake(B[0]); | ||||
| 
 | ||||
|   std::vector<Field> tmp(Nblock,Fake); | ||||
|   std::vector<Field>   Q(Nblock,Fake); | ||||
|   std::vector<Field>   D(Nblock,Fake); | ||||
|   std::vector<Field>   Z(Nblock,Fake); | ||||
|   std::vector<Field>  AD(Nblock,Fake); | ||||
| 
 | ||||
|   Eigen::MatrixXcd m_DZ     = Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_M      = Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_rr     = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
| 
 | ||||
|   Eigen::MatrixXcd m_C      = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_Cinv   = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_S      = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_Sinv   = Eigen::MatrixXcd::Zero(Nblock,Nblock); | ||||
| 
 | ||||
|   Eigen::MatrixXcd m_tmp    = Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
|   Eigen::MatrixXcd m_tmp1   = Eigen::MatrixXcd::Identity(Nblock,Nblock); | ||||
| 
 | ||||
|   // Initial residual computation & set up
 | ||||
|   std::vector<RealD> residuals(Nblock); | ||||
|   std::vector<RealD> ssq(Nblock); | ||||
| 
 | ||||
|   RealD sssum=0; | ||||
|   for(int b=0;b<Nblock;b++){ ssq[b] = norm2(B[b]);} | ||||
|   for(int b=0;b<Nblock;b++){ std::cout << "ssq["<<b<<"] "<<ssq[b]<<std::endl;} | ||||
|   for(int b=0;b<Nblock;b++) sssum+=ssq[b]; | ||||
| 
 | ||||
|   for(int b=0;b<Nblock;b++){ residuals[b] = norm2(B[b]);} | ||||
|   for(int b=0;b<Nblock;b++){ assert(std::isnan(residuals[b])==0); } | ||||
| 
 | ||||
|   for(int b=0;b<Nblock;b++){ residuals[b] = norm2(X[b]);} | ||||
|   for(int b=0;b<Nblock;b++){ assert(std::isnan(residuals[b])==0); } | ||||
| 
 | ||||
|   /************************************************************************
 | ||||
|    * Block conjugate gradient rQ (Sebastien Birk Thesis, after Dubrulle 2001) | ||||
|    ************************************************************************ | ||||
|    * Dimensions: | ||||
|    * | ||||
|    *   X,B==(Nferm x Nblock) | ||||
|    *   A==(Nferm x Nferm) | ||||
|    *   | ||||
|    * Nferm = Nspin x Ncolour x Ncomplex x Nlattice_site | ||||
|    *  | ||||
|    * QC = R = B-AX, D = Q     ; QC => Thin QR factorisation (google it) | ||||
|    * for k:  | ||||
|    *   Z  = AD | ||||
|    *   M  = [D^dag Z]^{-1} | ||||
|    *   X  = X + D MC | ||||
|    *   QS = Q - ZM | ||||
|    *   D  = Q + D S^dag | ||||
|    *   C  = S C | ||||
|    */ | ||||
|   ///////////////////////////////////////
 | ||||
|   // Initial block: initial search dir is guess
 | ||||
|   ///////////////////////////////////////
 | ||||
|   std::cout << GridLogMessage<<"BlockCGrQvec algorithm initialisation " <<std::endl; | ||||
| 
 | ||||
|   //1.  QC = R = B-AX, D = Q     ; QC => Thin QR factorisation (google it)
 | ||||
|   for(int b=0;b<Nblock;b++) { | ||||
|     Linop.HermOp(X[b], AD[b]); | ||||
|     tmp[b] = B[b] - AD[b];   | ||||
|     std::cout << "r0["<<b<<"] "<<norm2(tmp[b])<<std::endl; | ||||
|   } | ||||
| 
 | ||||
|   ThinQRfact (m_rr, m_C, m_Cinv, Q, tmp); | ||||
| 
 | ||||
|   for(int b=0;b<Nblock;b++) D[b]=Q[b]; | ||||
| 
 | ||||
|   std::cout << GridLogMessage<<"BlockCGrQ vec computed initial residual and QR fact " <<std::endl; | ||||
| 
 | ||||
|   ///////////////////////////////////////
 | ||||
|   // Timers
 | ||||
|   ///////////////////////////////////////
 | ||||
|   GridStopWatch sliceInnerTimer; | ||||
|   GridStopWatch sliceMaddTimer; | ||||
|   GridStopWatch QRTimer; | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch SolverTimer; | ||||
|   SolverTimer.Start(); | ||||
| 
 | ||||
|   int k; | ||||
|   for (k = 1; k <= MaxIterations; k++) { | ||||
| 
 | ||||
|     //3. Z  = AD
 | ||||
|     MatrixTimer.Start(); | ||||
|     for(int b=0;b<Nblock;b++) Linop.HermOp(D[b], Z[b]);       | ||||
|     MatrixTimer.Stop(); | ||||
| 
 | ||||
|     //4. M  = [D^dag Z]^{-1}
 | ||||
|     sliceInnerTimer.Start(); | ||||
|     InnerProductMatrix(m_DZ,D,Z); | ||||
|     sliceInnerTimer.Stop(); | ||||
|     m_M       = m_DZ.inverse(); | ||||
|      | ||||
|     //5. X  = X + D MC
 | ||||
|     m_tmp     = m_M * m_C; | ||||
|     sliceMaddTimer.Start(); | ||||
|     MaddMatrix(X,m_tmp, D,X);      | ||||
|     sliceMaddTimer.Stop(); | ||||
| 
 | ||||
|     //6. QS = Q - ZM
 | ||||
|     sliceMaddTimer.Start(); | ||||
|     MaddMatrix(tmp,m_M,Z,Q,-1.0); | ||||
|     sliceMaddTimer.Stop(); | ||||
|     QRTimer.Start(); | ||||
|     ThinQRfact (m_rr, m_S, m_Sinv, Q, tmp); | ||||
|     QRTimer.Stop(); | ||||
|      | ||||
|     //7. D  = Q + D S^dag
 | ||||
|     m_tmp = m_S.adjoint(); | ||||
|     sliceMaddTimer.Start(); | ||||
|     MaddMatrix(D,m_tmp,D,Q); | ||||
|     sliceMaddTimer.Stop(); | ||||
| 
 | ||||
|     //8. C  = S C
 | ||||
|     m_C = m_S*m_C; | ||||
|      | ||||
|     /*********************
 | ||||
|      * convergence monitor | ||||
|      ********************* | ||||
|      */ | ||||
|     m_rr = m_C.adjoint() * m_C; | ||||
| 
 | ||||
|     RealD max_resid=0; | ||||
|     RealD rrsum=0; | ||||
|     RealD rr; | ||||
| 
 | ||||
|     for(int b=0;b<Nblock;b++) { | ||||
|       rrsum+=real(m_rr(b,b)); | ||||
|       rr = real(m_rr(b,b))/ssq[b]; | ||||
|       if ( rr > max_resid ) max_resid = rr; | ||||
|     } | ||||
| 
 | ||||
|     std::cout << GridLogIterative << "\t Block Iteration "<<k<<" ave resid "<< std::sqrt(rrsum/sssum) << " max "<< std::sqrt(max_resid) <<std::endl; | ||||
| 
 | ||||
|     if ( max_resid < Tolerance*Tolerance ) {  | ||||
| 
 | ||||
|       SolverTimer.Stop(); | ||||
| 
 | ||||
|       std::cout << GridLogMessage<<"BlockCGrQ converged in "<<k<<" iterations"<<std::endl; | ||||
| 
 | ||||
|       for(int b=0;b<Nblock;b++){ | ||||
| 	std::cout << GridLogMessage<< "\t\tblock "<<b<<" computed resid "<< std::sqrt(real(m_rr(b,b))/ssq[b])<<std::endl; | ||||
|       } | ||||
|       std::cout << GridLogMessage<<"\tMax residual is "<<std::sqrt(max_resid)<<std::endl; | ||||
| 
 | ||||
|       for(int b=0;b<Nblock;b++) Linop.HermOp(X[b], AD[b]); | ||||
|       for(int b=0;b<Nblock;b++) AD[b] = AD[b]-B[b]; | ||||
|       TrueResidual = std::sqrt(normv(AD)/normv(B)); | ||||
|       std::cout << GridLogMessage << "\tTrue residual is " << TrueResidual <<std::endl; | ||||
| 
 | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tInnerProd  " << sliceInnerTimer.Elapsed() <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMaddMatrix " << sliceMaddTimer.Elapsed()  <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tThinQRfact " << QRTimer.Elapsed()  <<std::endl; | ||||
| 	     | ||||
|       IterationsToComplete = k; | ||||
|       return; | ||||
|     } | ||||
| 
 | ||||
|   } | ||||
|   std::cout << GridLogMessage << "BlockConjugateGradient(rQ) did NOT converge" << std::endl; | ||||
| 
 | ||||
|   if (ErrorOnNoConverge) assert(0); | ||||
|   IterationsToComplete = k; | ||||
| } | ||||
| 
 | ||||
| }; | ||||
| 
 | ||||
| } | ||||
| #endif | ||||
| NAMESPACE_END(Grid); | ||||
| 
 | ||||
| @@ -0,0 +1,248 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/CommunicationAvoidingGeneralisedMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||
| #define GRID_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class Field> | ||||
| class CommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // Throw an assert when CAGMRES fails to converge, | ||||
|                           // defaults to true | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|  | ||||
|   Integer MaxIterations; | ||||
|   Integer RestartLength; | ||||
|   Integer MaxNumberOfRestarts; | ||||
|   Integer IterationCount; // Number of iterations the CAGMRES took to finish, | ||||
|                           // filled in upon completion | ||||
|  | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|   GridStopWatch QrTimer; | ||||
|   GridStopWatch CompSolutionTimer; | ||||
|  | ||||
|   Eigen::MatrixXcd H; | ||||
|  | ||||
|   std::vector<ComplexD> y; | ||||
|   std::vector<ComplexD> gamma; | ||||
|   std::vector<ComplexD> c; | ||||
|   std::vector<ComplexD> s; | ||||
|  | ||||
|   CommunicationAvoidingGeneralisedMinimalResidual(RealD   tol, | ||||
|                                                   Integer maxit, | ||||
|                                                   Integer restart_length, | ||||
|                                                   bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , RestartLength(restart_length) | ||||
|       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||
|       , ErrorOnNoConverge(err_on_no_conv) | ||||
|       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||
|       , y(RestartLength + 1, 0.) | ||||
|       , gamma(RestartLength + 1, 0.) | ||||
|       , c(RestartLength + 1, 0.) | ||||
|       , s(RestartLength + 1, 0.) {}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||
|  | ||||
|     std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular GMRES" << std::endl; | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||
|  | ||||
|     MatrixTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|     QrTimer.Reset(); | ||||
|     CompSolutionTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     IterationCount = 0; | ||||
|  | ||||
|     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||
|  | ||||
|       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|  | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         LinOp.Op(psi,r); | ||||
|         axpy(r,-1.0,src,r); | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "CommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "CAGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "CAGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "CAGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "CAGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "CAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "CommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||
|  | ||||
|     RealD cp = 0; | ||||
|  | ||||
|     Field w(src.Grid()); | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     // this should probably be made a class member so that it is only allocated once, not in every restart | ||||
|     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(psi, w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r = src - w; | ||||
|  | ||||
|     gamma[0] = sqrt(norm2(r)); | ||||
|  | ||||
|     ComplexD scale = 1.0/gamma[0]; | ||||
|     v[0] = scale * r; | ||||
|  | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for (int i=0; i<RestartLength; i++) { | ||||
|  | ||||
|       IterationCount++; | ||||
|  | ||||
|       arnoldiStep(LinOp, v, w, i); | ||||
|  | ||||
|       qrUpdate(i); | ||||
|  | ||||
|       cp = norm(gamma[i+1]); | ||||
|  | ||||
|       std::cout << GridLogIterative << "CommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||
|  | ||||
|         computeSolution(v, psi, i); | ||||
|  | ||||
|         return cp; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     assert(0); // Never reached | ||||
|     return cp; | ||||
|   } | ||||
|  | ||||
|   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) { | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(v[iter], w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     for (int i = 0; i <= iter; ++i) { | ||||
|       H(iter, i) = innerProduct(v[i], w); | ||||
|       w = w - ComplexD(H(iter, i)) * v[i]; | ||||
|     } | ||||
|  | ||||
|     H(iter, iter + 1) = sqrt(norm2(w)); | ||||
|     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||
|     LinalgTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void qrUpdate(int iter) { | ||||
|  | ||||
|     QrTimer.Start(); | ||||
|     for (int i = 0; i < iter ; ++i) { | ||||
|       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i + 1) = tmp; | ||||
|     } | ||||
|  | ||||
|     // Compute new Givens Rotation | ||||
|     auto nu     = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||
|     c[iter]     = H(iter, iter) / nu; | ||||
|     s[iter]     = H(iter, iter + 1) / nu; | ||||
|  | ||||
|     // Apply new Givens rotation | ||||
|     H(iter, iter)     = nu; | ||||
|     H(iter, iter + 1) = 0.; | ||||
|  | ||||
|     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||
|     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||
|     QrTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void computeSolution(std::vector<Field> const &v, Field &psi, int iter) { | ||||
|  | ||||
|     CompSolutionTimer.Start(); | ||||
|     for (int i = iter; i >= 0; i--) { | ||||
|       y[i] = gamma[i]; | ||||
|       for (int k = i + 1; k <= iter; k++) | ||||
|         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||
|       y[i] = y[i] / ComplexD(H(i, i)); | ||||
|     } | ||||
|  | ||||
|     for (int i = 0; i <= iter; i++) | ||||
|       psi = psi + v[i] * y[i]; | ||||
|     CompSolutionTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
| } | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/iterative/ConjugateGradient.h
									
									
									
									
									
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								Grid/algorithms/iterative/ConjugateGradient.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,373 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/ConjugateGradient.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| 			   /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_H | ||||
| #define GRID_CONJUGATE_GRADIENT_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
|  | ||||
| template <class Field> | ||||
| class ConjugateGradient : public OperatorFunction<Field> { | ||||
| public: | ||||
|  | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|    | ||||
|   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||
|                            // Defaults true. | ||||
|   RealD Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   RealD TrueResidual; | ||||
|    | ||||
|   ConjugateGradient(RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), | ||||
|       MaxIterations(maxit), | ||||
|       ErrorOnNoConverge(err_on_no_conv) | ||||
|   {}; | ||||
|  | ||||
|   virtual void LogIteration(int k,RealD a,RealD b){ | ||||
|     //    std::cout << "ConjugageGradient::LogIteration() "<<std::endl; | ||||
|   }; | ||||
|   virtual void LogBegin(void){ | ||||
|     std::cout << "ConjugageGradient::LogBegin() "<<std::endl; | ||||
|   }; | ||||
|  | ||||
|     void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { | ||||
|  | ||||
|       this->LogBegin(); | ||||
|  | ||||
|       GRID_TRACE("ConjugateGradient"); | ||||
|     GridStopWatch PreambleTimer; | ||||
|     GridStopWatch ConstructTimer; | ||||
|     GridStopWatch NormTimer; | ||||
|     GridStopWatch AssignTimer; | ||||
|     PreambleTimer.Start(); | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|  | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD cp, c, a, d, b, ssq, qq; | ||||
|     //RealD b_pred; | ||||
|  | ||||
|     // Was doing copies | ||||
|     ConstructTimer.Start(); | ||||
|     Field p  (src.Grid()); | ||||
|     Field mmp(src.Grid()); | ||||
|     Field r  (src.Grid()); | ||||
|     ConstructTimer.Stop(); | ||||
|  | ||||
|     // Initial residual computation & set up | ||||
|     NormTimer.Start(); | ||||
|     ssq = norm2(src); | ||||
|     RealD guess = norm2(psi); | ||||
|     NormTimer.Stop(); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|     AssignTimer.Start(); | ||||
|     if ( guess == 0.0 ) { | ||||
|       r = src; | ||||
|       p = r; | ||||
|       a = ssq; | ||||
|     } else {  | ||||
|       Linop.HermOpAndNorm(psi, mmp, d, b); | ||||
|       r = src - mmp; | ||||
|       p = r; | ||||
|       a = norm2(p); | ||||
|     } | ||||
|     cp = a; | ||||
|     AssignTimer.Stop(); | ||||
|  | ||||
|     // Handle trivial case of zero src | ||||
|     if (ssq == 0.){ | ||||
|       psi = Zero(); | ||||
|       IterationsToComplete = 1; | ||||
|       TrueResidual = 0.; | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   src " << ssq << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:    mp " << d << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:   mmp " << b << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:  cp,r " << cp << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(8) << "ConjugateGradient:     p " << a << std::endl; | ||||
|  | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     // Check if guess is really REALLY good :) | ||||
|     if (cp <= rsq) { | ||||
|       TrueResidual = std::sqrt(a/ssq); | ||||
|       std::cout << GridLogMessage << "ConjugateGradient guess is converged already " << std::endl; | ||||
|       IterationsToComplete = 0;	 | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << std::setprecision(8) | ||||
|               << "ConjugateGradient: k=0 residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|     PreambleTimer.Stop(); | ||||
|     GridStopWatch LinalgTimer; | ||||
|     GridStopWatch InnerTimer; | ||||
|     GridStopWatch AxpyNormTimer; | ||||
|     GridStopWatch LinearCombTimer; | ||||
|     GridStopWatch MatrixTimer; | ||||
|     GridStopWatch SolverTimer; | ||||
|  | ||||
|     RealD usecs = -usecond(); | ||||
|     SolverTimer.Start(); | ||||
|     int k; | ||||
|     for (k = 1; k <= MaxIterations; k++) { | ||||
|  | ||||
|       GridStopWatch IterationTimer; | ||||
|       IterationTimer.Start(); | ||||
|       c = cp; | ||||
|  | ||||
|       MatrixTimer.Start(); | ||||
|       Linop.HermOp(p, mmp); | ||||
|       MatrixTimer.Stop(); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       InnerTimer.Start(); | ||||
|       ComplexD dc  = innerProduct(p,mmp); | ||||
|       InnerTimer.Stop(); | ||||
|       d = dc.real(); | ||||
|       a = c / d; | ||||
|  | ||||
|       AxpyNormTimer.Start(); | ||||
|       cp = axpy_norm(r, -a, mmp, r); | ||||
|       AxpyNormTimer.Stop(); | ||||
|       b = cp / c; | ||||
|  | ||||
|       LinearCombTimer.Start(); | ||||
|       { | ||||
| 	autoView( psi_v , psi, AcceleratorWrite); | ||||
| 	autoView( p_v   , p,   AcceleratorWrite); | ||||
| 	autoView( r_v   , r,   AcceleratorWrite); | ||||
| 	accelerator_for(ss,p_v.size(), Field::vector_object::Nsimd(),{ | ||||
| 	    coalescedWrite(psi_v[ss], a      *  p_v(ss) + psi_v(ss)); | ||||
| 	    coalescedWrite(p_v[ss]  , b      *  p_v(ss) + r_v  (ss)); | ||||
| 	}); | ||||
|       } | ||||
|       LinearCombTimer.Stop(); | ||||
|       LinalgTimer.Stop(); | ||||
|       LogIteration(k,a,b); | ||||
|  | ||||
|       IterationTimer.Stop(); | ||||
|       if ( (k % 500) == 0 ) { | ||||
| 	std::cout << GridLogMessage << "ConjugateGradient: Iteration " << k | ||||
|                 << " residual " << sqrt(cp/ssq) << " target " << Tolerance << std::endl; | ||||
|       } else {  | ||||
| 	std::cout << GridLogIterative << "ConjugateGradient: Iteration " << k | ||||
| 		  << " residual " << sqrt(cp/ssq) << " target " << Tolerance << " took " << IterationTimer.Elapsed() << std::endl; | ||||
|       } | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
| 	usecs +=usecond(); | ||||
|         SolverTimer.Stop(); | ||||
|         Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||
|         p = mmp - src; | ||||
| 	GridBase *grid = src.Grid(); | ||||
| 	RealD DwfFlops = (1452. )*grid->gSites()*4*k | ||||
|    	               + (8+4+8+4+4)*12*grid->gSites()*k; // CG linear algebra | ||||
|         RealD srcnorm = std::sqrt(norm2(src)); | ||||
|         RealD resnorm = std::sqrt(norm2(p)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|         std::cout << GridLogMessage << "ConjugateGradient Converged on iteration " << k  | ||||
| 		  << "\tComputed residual " << std::sqrt(cp / ssq) | ||||
| 		  << "\tTrue residual " << true_residual | ||||
| 		  << "\tTarget " << Tolerance << std::endl; | ||||
|  | ||||
| 	//	std::cout << GridLogMessage << "\tPreamble   " << PreambleTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver Elapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||
|         std::cout << GridLogPerformance << "Time breakdown "<<std::endl; | ||||
| 	std::cout << GridLogPerformance << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogPerformance << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogPerformance << "\t\tInner      " << InnerTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogPerformance << "\t\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogPerformance << "\t\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | ||||
|  | ||||
| 	std::cout << GridLogDebug << "\tMobius flop rate " << DwfFlops/ usecs<< " Gflops " <<std::endl; | ||||
|  | ||||
|         if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
| 	TrueResidual = true_residual; | ||||
|  | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|     // Failed. Calculate true residual before giving up                                                          | ||||
|     // Linop.HermOpAndNorm(psi, mmp, d, qq); | ||||
|     //    p = mmp - src; | ||||
|     //TrueResidual = sqrt(norm2(p)/ssq); | ||||
|     //    TrueResidual = 1; | ||||
|  | ||||
|     std::cout << GridLogMessage << "ConjugateGradient did NOT converge "<<k<<" / "<< MaxIterations | ||||
|     	      <<" residual "<< std::sqrt(cp / ssq)<< std::endl; | ||||
|     SolverTimer.Stop(); | ||||
|     std::cout << GridLogMessage << "\tPreamble   " << PreambleTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage << "\tConstruct  " << ConstructTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage << "\tNorm       " << NormTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage << "\tAssign     " << AssignTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage << "\tSolver     " << SolverTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage << "Solver breakdown "<<std::endl; | ||||
|     std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogMessage<< "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\t\tInner      " << InnerTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\t\tAxpyNorm   " << AxpyNormTimer.Elapsed() <<std::endl; | ||||
|     std::cout << GridLogPerformance << "\t\tLinearComb " << LinearCombTimer.Elapsed() <<std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) assert(0); | ||||
|     IterationsToComplete = k; | ||||
|  | ||||
|   } | ||||
| }; | ||||
|  | ||||
|  | ||||
| template <class Field> | ||||
| class ConjugateGradientPolynomial : public ConjugateGradient<Field> { | ||||
| public: | ||||
|   // Optionally record the CG polynomial | ||||
|   std::vector<double> ak; | ||||
|   std::vector<double> bk; | ||||
|   std::vector<double> poly_p; | ||||
|   std::vector<double> poly_r; | ||||
|   std::vector<double> poly_Ap; | ||||
|   std::vector<double> polynomial; | ||||
|  | ||||
| public: | ||||
|   ConjugateGradientPolynomial(RealD tol, Integer maxit, bool err_on_no_conv = true) | ||||
|     : ConjugateGradient<Field>(tol,maxit,err_on_no_conv) | ||||
|   { }; | ||||
|   void PolyHermOp(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||
|   { | ||||
|     Field tmp(src.Grid()); | ||||
|     Field AtoN(src.Grid()); | ||||
|     AtoN = src; | ||||
|     psi=AtoN*polynomial[0]; | ||||
|     for(int n=1;n<polynomial.size();n++){ | ||||
|       tmp = AtoN; | ||||
|       Linop.HermOp(tmp,AtoN); | ||||
|       psi = psi + polynomial[n]*AtoN; | ||||
|     } | ||||
|   } | ||||
|   void CGsequenceHermOp(LinearOperatorBase<Field> &Linop, const Field &src, Field &x) | ||||
|   { | ||||
|     Field Ap(src.Grid()); | ||||
|     Field r(src.Grid()); | ||||
|     Field p(src.Grid()); | ||||
|     p=src; | ||||
|     r=src; | ||||
|     x=Zero(); | ||||
|     x.Checkerboard()=src.Checkerboard(); | ||||
|     for(int k=0;k<ak.size();k++){ | ||||
|       x = x + ak[k]*p; | ||||
|       Linop.HermOp(p,Ap); | ||||
|       r = r - ak[k] * Ap; | ||||
|       p = r + bk[k] * p; | ||||
|     } | ||||
|   } | ||||
|   void Solve(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||
|   { | ||||
|     psi=Zero(); | ||||
|     this->operator ()(Linop,src,psi); | ||||
|   } | ||||
|   virtual void LogBegin(void) | ||||
|   { | ||||
|     std::cout << "ConjugageGradientPolynomial::LogBegin() "<<std::endl; | ||||
|     ak.resize(0); | ||||
|     bk.resize(0); | ||||
|     polynomial.resize(0); | ||||
|     poly_Ap.resize(0); | ||||
|     poly_Ap.resize(0); | ||||
|     poly_p.resize(1); | ||||
|     poly_r.resize(1); | ||||
|     poly_p[0]=1.0; | ||||
|     poly_r[0]=1.0; | ||||
|   }; | ||||
|   virtual void LogIteration(int k,RealD a,RealD b) | ||||
|   { | ||||
|     // With zero guess, | ||||
|     // p = r = src | ||||
|     // | ||||
|     // iterate: | ||||
|     //   x =  x + a p | ||||
|     //   r =  r - a A p | ||||
|     //   p =  r + b p | ||||
|     // | ||||
|     // [0] | ||||
|     // r = x | ||||
|     // p = x | ||||
|     // Ap=0 | ||||
|     // | ||||
|     // [1] | ||||
|     // Ap = A x + 0  ==> shift poly P right by 1 and add 0. | ||||
|     // x  = x + a p  ==> add polynomials term by term  | ||||
|     // r  = r - a A p  ==> add polynomials term by term | ||||
|     // p  = r + b p  ==> add polynomials term by term | ||||
|     // | ||||
|     std::cout << "ConjugageGradientPolynomial::LogIteration() "<<k<<std::endl; | ||||
|     ak.push_back(a); | ||||
|     bk.push_back(b); | ||||
|     //  Ap= right_shift(p) | ||||
|     poly_Ap.resize(k+1); | ||||
|     poly_Ap[0]=0.0; | ||||
|     for(int i=0;i<k;i++){ | ||||
|       poly_Ap[i+1]=poly_p[i]; | ||||
|     } | ||||
|  | ||||
|     //  x = x + a p | ||||
|     polynomial.resize(k); | ||||
|     polynomial[k-1]=0.0; | ||||
|     for(int i=0;i<k;i++){ | ||||
|       polynomial[i] = polynomial[i] + a * poly_p[i]; | ||||
|     } | ||||
|      | ||||
|     //  r = r - a Ap | ||||
|     //  p = r + b p | ||||
|     poly_r.resize(k+1); | ||||
|     poly_p.resize(k+1); | ||||
|     poly_r[k] = poly_p[k] = 0.0; | ||||
|     for(int i=0;i<k+1;i++){ | ||||
|       poly_r[i] = poly_r[i] - a * poly_Ap[i]; | ||||
|       poly_p[i] = poly_r[i] + b * poly_p[i]; | ||||
|     } | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										170
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										170
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrec.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,170 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMixedPrec.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | ||||
| #define GRID_CONJUGATE_GRADIENT_MIXED_PREC_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|   //Mixed precision restarted defect correction CG | ||||
|   template<class FieldD,class FieldF,  | ||||
|     typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
|     typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
|   class MixedPrecisionConjugateGradient : public LinearFunction<FieldD> { | ||||
|   public: | ||||
|     using LinearFunction<FieldD>::operator(); | ||||
|     RealD   Tolerance; | ||||
|     RealD   InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|     Integer MaxInnerIterations; | ||||
|     Integer MaxOuterIterations; | ||||
|     GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|     RealD OuterLoopNormMult; //Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||
|     LinearOperatorBase<FieldF> &Linop_f; | ||||
|     LinearOperatorBase<FieldD> &Linop_d; | ||||
|  | ||||
|     Integer TotalInnerIterations; //Number of inner CG iterations | ||||
|     Integer TotalOuterIterations; //Number of restarts | ||||
|     Integer TotalFinalStepIterations; //Number of CG iterations in final patch-up step | ||||
|     RealD TrueResidual; | ||||
|  | ||||
|     //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|     LinearFunction<FieldF> *guesser; | ||||
|      | ||||
|     MixedPrecisionConjugateGradient(RealD tol,  | ||||
| 				    Integer maxinnerit,  | ||||
| 				    Integer maxouterit,  | ||||
| 				    GridBase* _sp_grid,  | ||||
| 				    LinearOperatorBase<FieldF> &_Linop_f,  | ||||
| 				    LinearOperatorBase<FieldD> &_Linop_d) : | ||||
|       Linop_f(_Linop_f), Linop_d(_Linop_d), | ||||
|       Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), MaxOuterIterations(maxouterit), SinglePrecGrid(_sp_grid), | ||||
|       OuterLoopNormMult(100.), guesser(NULL){ }; | ||||
|  | ||||
|     void useGuesser(LinearFunction<FieldF> &g){ | ||||
|       guesser = &g; | ||||
|     } | ||||
|    | ||||
|   void operator() (const FieldD &src_d_in, FieldD &sol_d){ | ||||
|     std::cout << GridLogMessage << "MixedPrecisionConjugateGradient: Starting mixed precision CG with outer tolerance " << Tolerance << " and inner tolerance " << InnerTolerance << std::endl; | ||||
|     TotalInnerIterations = 0; | ||||
| 	 | ||||
|     GridStopWatch TotalTimer; | ||||
|     TotalTimer.Start(); | ||||
|      | ||||
|     int cb = src_d_in.Checkerboard(); | ||||
|     sol_d.Checkerboard() = cb; | ||||
|      | ||||
|     RealD src_norm = norm2(src_d_in); | ||||
|     RealD stop = src_norm * Tolerance*Tolerance; | ||||
|  | ||||
|     GridBase* DoublePrecGrid = src_d_in.Grid(); | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     tmp_d.Checkerboard() = cb; | ||||
|      | ||||
|     FieldD tmp2_d(DoublePrecGrid); | ||||
|     tmp2_d.Checkerboard() = cb; | ||||
|      | ||||
|     FieldD src_d(DoublePrecGrid); | ||||
|     src_d = src_d_in; //source for next inner iteration, computed from residual during operation | ||||
|      | ||||
|     RealD inner_tol = InnerTolerance; | ||||
|      | ||||
|     FieldF src_f(SinglePrecGrid); | ||||
|     src_f.Checkerboard() = cb; | ||||
|      | ||||
|     FieldF sol_f(SinglePrecGrid); | ||||
|     sol_f.Checkerboard() = cb; | ||||
|      | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Starting initial inner CG with tolerance " << inner_tol << std::endl; | ||||
|     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|     CG_f.ErrorOnNoConverge = false; | ||||
|  | ||||
|     GridStopWatch InnerCGtimer; | ||||
|  | ||||
|     GridStopWatch PrecChangeTimer; | ||||
|      | ||||
|     Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|  | ||||
|     precisionChangeWorkspace pc_wk_sp_to_dp(DoublePrecGrid, SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_dp_to_sp(SinglePrecGrid, DoublePrecGrid); | ||||
|      | ||||
|     for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++){ | ||||
|       //Compute double precision rsd and also new RHS vector. | ||||
|       Linop_d.HermOp(sol_d, tmp_d); | ||||
|       RealD norm = axpy_norm(src_d, -1., tmp_d, src_d_in); //src_d is residual vector | ||||
|       std::cout<<GridLogMessage<<" rsd norm "<<norm<<std::endl; | ||||
|       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration " <<outer_iter<<" residual "<< norm<< " target "<< stop<<std::endl; | ||||
|  | ||||
|       if(norm < OuterLoopNormMult * stop){ | ||||
| 	std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration converged on iteration " <<outer_iter <<std::endl; | ||||
| 	break; | ||||
|       } | ||||
|       while(norm * inner_tol * inner_tol < stop*1.01) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ?? | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(src_f, src_d, pc_wk_dp_to_sp); | ||||
|       PrecChangeTimer.Stop(); | ||||
|        | ||||
|       sol_f = Zero(); | ||||
|  | ||||
|       //Optionally improve inner solver guess (eg using known eigenvectors) | ||||
|       if(guesser != NULL) | ||||
| 	(*guesser)(src_f, sol_f); | ||||
|  | ||||
|       //Inner CG | ||||
|       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Outer iteration " << outer_iter << " starting inner CG with tolerance " << inner_tol << std::endl; | ||||
|       CG_f.Tolerance = inner_tol; | ||||
|       InnerCGtimer.Start(); | ||||
|       CG_f(Linop_f, src_f, sol_f); | ||||
|       InnerCGtimer.Stop(); | ||||
|       TotalInnerIterations += CG_f.IterationsToComplete; | ||||
|        | ||||
|       //Convert sol back to double and add to double prec solution | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(tmp_d, sol_f, pc_wk_sp_to_dp); | ||||
|       PrecChangeTimer.Stop(); | ||||
|        | ||||
|       axpy(sol_d, 1.0, tmp_d, sol_d); | ||||
|     } | ||||
|      | ||||
|     //Final trial CG | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Starting final patch-up double-precision solve"<<std::endl; | ||||
|      | ||||
|     ConjugateGradient<FieldD> CG_d(Tolerance, MaxInnerIterations); | ||||
|     CG_d(Linop_d, src_d_in, sol_d); | ||||
|     TotalFinalStepIterations = CG_d.IterationsToComplete; | ||||
|     TrueResidual = CG_d.TrueResidual; | ||||
|  | ||||
|     TotalTimer.Stop(); | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Inner CG iterations " << TotalInnerIterations << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations << std::endl; | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradient: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										213
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										213
									
								
								Grid/algorithms/iterative/ConjugateGradientMixedPrecBatched.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,213 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMixedPrecBatched.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
|     Author: Raoul Hodgson <raoul.hodgson@ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_MIXED_PREC_BATCHED_H | ||||
| #define GRID_CONJUGATE_GRADIENT_MIXED_PREC_BATCHED_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //Mixed precision restarted defect correction CG | ||||
| template<class FieldD,class FieldF,  | ||||
|   typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
|   typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class MixedPrecisionConjugateGradientBatched : public LinearFunction<FieldD> { | ||||
| public: | ||||
|   using LinearFunction<FieldD>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   RealD   InnerTolerance; //Initial tolerance for inner CG. Defaults to Tolerance but can be changed | ||||
|   Integer MaxInnerIterations; | ||||
|   Integer MaxOuterIterations; | ||||
|   Integer MaxPatchupIterations; | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   RealD OuterLoopNormMult; //Stop the outer loop and move to a final double prec solve when the residual is OuterLoopNormMult * Tolerance | ||||
|   LinearOperatorBase<FieldF> &Linop_f; | ||||
|   LinearOperatorBase<FieldD> &Linop_d; | ||||
|  | ||||
|   //Option to speed up *inner single precision* solves using a LinearFunction that produces a guess | ||||
|   LinearFunction<FieldF> *guesser; | ||||
|   bool updateResidual; | ||||
|    | ||||
|   MixedPrecisionConjugateGradientBatched(RealD tol,  | ||||
|           Integer maxinnerit,  | ||||
|           Integer maxouterit,  | ||||
|           Integer maxpatchit, | ||||
|           GridBase* _sp_grid,  | ||||
|           LinearOperatorBase<FieldF> &_Linop_f,  | ||||
|           LinearOperatorBase<FieldD> &_Linop_d, | ||||
|           bool _updateResidual=true) : | ||||
|     Linop_f(_Linop_f), Linop_d(_Linop_d), | ||||
|     Tolerance(tol), InnerTolerance(tol), MaxInnerIterations(maxinnerit), MaxOuterIterations(maxouterit), MaxPatchupIterations(maxpatchit), SinglePrecGrid(_sp_grid), | ||||
|     OuterLoopNormMult(100.), guesser(NULL), updateResidual(_updateResidual) { }; | ||||
|  | ||||
|   void useGuesser(LinearFunction<FieldF> &g){ | ||||
|     guesser = &g; | ||||
|   } | ||||
|    | ||||
|   void operator() (const FieldD &src_d_in, FieldD &sol_d){ | ||||
|     std::vector<FieldD> srcs_d_in{src_d_in}; | ||||
|     std::vector<FieldD> sols_d{sol_d}; | ||||
|  | ||||
|     (*this)(srcs_d_in,sols_d); | ||||
|  | ||||
|     sol_d = sols_d[0]; | ||||
|   } | ||||
|  | ||||
|   void operator() (const std::vector<FieldD> &src_d_in, std::vector<FieldD> &sol_d){ | ||||
|     assert(src_d_in.size() == sol_d.size()); | ||||
|     int NBatch = src_d_in.size(); | ||||
|  | ||||
|     std::cout << GridLogMessage << "NBatch = " << NBatch << std::endl; | ||||
|  | ||||
|     Integer TotalOuterIterations = 0; //Number of restarts | ||||
|     std::vector<Integer> TotalInnerIterations(NBatch,0);     //Number of inner CG iterations | ||||
|     std::vector<Integer> TotalFinalStepIterations(NBatch,0); //Number of CG iterations in final patch-up step | ||||
|    | ||||
|     GridStopWatch TotalTimer; | ||||
|     TotalTimer.Start(); | ||||
|  | ||||
|     GridStopWatch InnerCGtimer; | ||||
|     GridStopWatch PrecChangeTimer; | ||||
|      | ||||
|     int cb = src_d_in[0].Checkerboard(); | ||||
|      | ||||
|     std::vector<RealD> src_norm; | ||||
|     std::vector<RealD> norm; | ||||
|     std::vector<RealD> stop; | ||||
|      | ||||
|     GridBase* DoublePrecGrid = src_d_in[0].Grid(); | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     tmp_d.Checkerboard() = cb; | ||||
|      | ||||
|     FieldD tmp2_d(DoublePrecGrid); | ||||
|     tmp2_d.Checkerboard() = cb; | ||||
|  | ||||
|     std::vector<FieldD> src_d; | ||||
|     std::vector<FieldF> src_f; | ||||
|     std::vector<FieldF> sol_f; | ||||
|  | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       sol_d[i].Checkerboard() = cb; | ||||
|  | ||||
|       src_norm.push_back(norm2(src_d_in[i])); | ||||
|       norm.push_back(0.); | ||||
|       stop.push_back(src_norm[i] * Tolerance*Tolerance); | ||||
|  | ||||
|       src_d.push_back(src_d_in[i]); //source for next inner iteration, computed from residual during operation | ||||
|  | ||||
|       src_f.push_back(SinglePrecGrid); | ||||
|       src_f[i].Checkerboard() = cb; | ||||
|  | ||||
|       sol_f.push_back(SinglePrecGrid); | ||||
|       sol_f[i].Checkerboard() = cb; | ||||
|     } | ||||
|      | ||||
|     RealD inner_tol = InnerTolerance; | ||||
|      | ||||
|     ConjugateGradient<FieldF> CG_f(inner_tol, MaxInnerIterations); | ||||
|     CG_f.ErrorOnNoConverge = false; | ||||
|      | ||||
|     Integer &outer_iter = TotalOuterIterations; //so it will be equal to the final iteration count | ||||
|        | ||||
|     for(outer_iter = 0; outer_iter < MaxOuterIterations; outer_iter++){ | ||||
|       std::cout << GridLogMessage << std::endl; | ||||
|       std::cout << GridLogMessage << "Outer iteration " << outer_iter << std::endl; | ||||
|        | ||||
|       bool allConverged = true; | ||||
|        | ||||
|       for (int i=0; i<NBatch; i++) { | ||||
|         //Compute double precision rsd and also new RHS vector. | ||||
|         Linop_d.HermOp(sol_d[i], tmp_d); | ||||
|         norm[i] = axpy_norm(src_d[i], -1., tmp_d, src_d_in[i]); //src_d is residual vector | ||||
|          | ||||
|         std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Outer iteration " << outer_iter <<" solve " << i << " residual "<< norm[i] << " target "<< stop[i] <<std::endl; | ||||
|  | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(src_f[i], src_d[i]); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         sol_f[i] = Zero(); | ||||
|        | ||||
|         if(norm[i] > OuterLoopNormMult * stop[i]) { | ||||
|           allConverged = false; | ||||
|         } | ||||
|       } | ||||
|       if (allConverged) break; | ||||
|  | ||||
|       if (updateResidual) { | ||||
|         RealD normMax = *std::max_element(std::begin(norm), std::end(norm)); | ||||
|         RealD stopMax = *std::max_element(std::begin(stop), std::end(stop)); | ||||
|         while( normMax * inner_tol * inner_tol < stopMax) inner_tol *= 2;  // inner_tol = sqrt(stop/norm) ?? | ||||
|         CG_f.Tolerance = inner_tol; | ||||
|       } | ||||
|  | ||||
|       //Optionally improve inner solver guess (eg using known eigenvectors) | ||||
|       if(guesser != NULL) { | ||||
|         (*guesser)(src_f, sol_f); | ||||
|       } | ||||
|  | ||||
|       for (int i=0; i<NBatch; i++) { | ||||
|         //Inner CG | ||||
|         InnerCGtimer.Start(); | ||||
|         CG_f(Linop_f, src_f[i], sol_f[i]); | ||||
|         InnerCGtimer.Stop(); | ||||
|         TotalInnerIterations[i] += CG_f.IterationsToComplete; | ||||
|          | ||||
|         //Convert sol back to double and add to double prec solution | ||||
|         PrecChangeTimer.Start(); | ||||
|         precisionChange(tmp_d, sol_f[i]); | ||||
|         PrecChangeTimer.Stop(); | ||||
|          | ||||
|         axpy(sol_d[i], 1.0, tmp_d, sol_d[i]); | ||||
|       } | ||||
|  | ||||
|     } | ||||
|      | ||||
|     //Final trial CG | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Starting final patch-up double-precision solve"<<std::endl; | ||||
|      | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       ConjugateGradient<FieldD> CG_d(Tolerance, MaxPatchupIterations); | ||||
|       CG_d(Linop_d, src_d_in[i], sol_d[i]); | ||||
|       TotalFinalStepIterations[i] += CG_d.IterationsToComplete; | ||||
|     } | ||||
|  | ||||
|     TotalTimer.Stop(); | ||||
|  | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     for (int i=0; i<NBatch; i++) { | ||||
|       std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: solve " << i << " Inner CG iterations " << TotalInnerIterations[i] << " Restarts " << TotalOuterIterations << " Final CG iterations " << TotalFinalStepIterations[i] << std::endl; | ||||
|     } | ||||
|     std::cout << GridLogMessage << std::endl; | ||||
|     std::cout<<GridLogMessage<<"MixedPrecisionConjugateGradientBatched: Total time " << TotalTimer.Elapsed() << " Precision change " << PrecChangeTimer.Elapsed() << " Inner CG total " << InnerCGtimer.Elapsed() << std::endl; | ||||
|      | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										346
									
								
								Grid/algorithms/iterative/ConjugateGradientMultiShift.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										346
									
								
								Grid/algorithms/iterative/ConjugateGradientMultiShift.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,346 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMultiShift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | ||||
| #define GRID_CONJUGATE_MULTI_SHIFT_GRADIENT_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
| template<class Field>  | ||||
| class ConjugateGradientMultiShift : public OperatorMultiFunction<Field>, | ||||
| 				    public OperatorFunction<Field> | ||||
| { | ||||
| public:                                                 | ||||
|  | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   //  RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   ConjugateGradientMultiShift(Integer maxit, const MultiShiftFunction &_shifts) :  | ||||
|     MaxIterations(maxit), | ||||
|     shifts(_shifts) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     int nshift = shifts.order; | ||||
|     std::vector<Field> results(nshift,grid); | ||||
|     (*this)(Linop,src,results,psi); | ||||
|   } | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &results, Field &psi) | ||||
|   { | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     (*this)(Linop,src,results); | ||||
|    | ||||
|     psi = shifts.norm*src; | ||||
|     for(int i=0;i<nshift;i++){ | ||||
|       psi = psi + shifts.residues[i]*results[i]; | ||||
|     } | ||||
|  | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop, const Field &src, std::vector<Field> &psi) | ||||
|   { | ||||
|     GRID_TRACE("ConjugateGradientMultiShift"); | ||||
|    | ||||
|     GridBase *grid = src.Grid(); | ||||
|    | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     // Convenience references to the info stored in "MultiShiftFunction" | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     std::vector<RealD> &mass(shifts.poles); // Make references to array in "shifts" | ||||
|     std::vector<RealD> &mresidual(shifts.tolerances); | ||||
|     std::vector<RealD> alpha(nshift,1.0); | ||||
|     std::vector<Field>   ps(nshift,grid);// Search directions | ||||
|  | ||||
|     assert(psi.size()==nshift); | ||||
|     assert(mass.size()==nshift); | ||||
|     assert(mresidual.size()==nshift); | ||||
|    | ||||
|     // remove dynamic sized arrays on stack; 2d is a pain with vector | ||||
|     std::vector<RealD>  bs(nshift); | ||||
|     std::vector<RealD>  rsq(nshift); | ||||
|     std::vector<std::array<RealD,2> >  z(nshift); | ||||
|     std::vector<int>     converged(nshift); | ||||
|    | ||||
|     const int       primary =0; | ||||
|    | ||||
|     //Primary shift fields CG iteration | ||||
|     RealD a,b,c,d; | ||||
|     RealD cp,bp,qq; //prev | ||||
|    | ||||
|     // Matrix mult fields | ||||
|     Field r(grid); | ||||
|     Field p(grid); | ||||
|     Field tmp(grid); | ||||
|     Field mmp(grid); | ||||
|    | ||||
|     // Check lightest mass | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       assert( mass[s]>= mass[primary] ); | ||||
|       converged[s]=0; | ||||
|     } | ||||
|    | ||||
|     // Wire guess to zero | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShift: shift "<<s | ||||
| 	       <<" target resid^2 "<<rsq[s]<<std::endl; | ||||
|       ps[s] = src; | ||||
|     } | ||||
|     // r and p for primary | ||||
|     r=src; | ||||
|     p=src; | ||||
|    | ||||
|     //MdagM+m[0] | ||||
|     Linop.HermOpAndNorm(p,mmp,d,qq); | ||||
|     axpy(mmp,mass[0],p,mmp); | ||||
|     RealD rn = norm2(p); | ||||
|     d += rn*mass[0]; | ||||
|    | ||||
|     // have verified that inner product of  | ||||
|     // p and mmp is equal to d after this since | ||||
|     // the d computation is tricky | ||||
|     //  qq = real(innerProduct(p,mmp)); | ||||
|     //  std::cout<<GridLogMessage << "debug equal ?  qq "<<qq<<" d "<< d<<std::endl; | ||||
|    | ||||
|     b = -cp /d; | ||||
|    | ||||
|     // Set up the various shift variables | ||||
|     int       iz=0; | ||||
|     z[0][1-iz] = 1.0; | ||||
|     z[0][iz]   = 1.0; | ||||
|     bs[0]      = b; | ||||
|     for(int s=1;s<nshift;s++){ | ||||
|       z[s][1-iz] = 1.0; | ||||
|       z[s][iz]   = 1.0/( 1.0 - b*(mass[s]-mass[0])); | ||||
|       bs[s]      = b*z[s][iz];  | ||||
|     } | ||||
|    | ||||
|     // r += b[0] A.p[0] | ||||
|     // c= norm(r) | ||||
|     c=axpy_norm(r,b,mmp,r); | ||||
|    | ||||
|     for(int s=0;s<nshift;s++) { | ||||
|       axpby(psi[s],0.,-bs[s]*alpha[s],src,src); | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << "ConjugateGradientMultiShift: initial rn (|src|^2) =" << rn << " qq (|MdagM src|^2) =" << qq << " d ( dot(src, [MdagM + m_0]src) ) =" << d << " c=" << c << std::endl; | ||||
|      | ||||
|    | ||||
|   /////////////////////////////////////// | ||||
|   // Timers | ||||
|   /////////////////////////////////////// | ||||
|   GridStopWatch AXPYTimer; | ||||
|   GridStopWatch ShiftTimer; | ||||
|   GridStopWatch QRTimer; | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch SolverTimer; | ||||
|   SolverTimer.Start(); | ||||
|    | ||||
|     // Iteration loop | ||||
|     int k; | ||||
|    | ||||
|     for (k=1;k<=MaxIterations;k++){ | ||||
|      | ||||
|       a = c /cp; | ||||
|     AXPYTimer.Start(); | ||||
|       axpy(p,a,p,r); | ||||
|     AXPYTimer.Stop(); | ||||
|      | ||||
|       // Note to self - direction ps is iterated seperately | ||||
|       // for each shift. Does not appear to have any scope | ||||
|       // for avoiding linear algebra in "single" case. | ||||
|       //  | ||||
|       // However SAME r is used. Could load "r" and update | ||||
|       // ALL ps[s]. 2/3 Bandwidth saving | ||||
|       // New Kernel: Load r, vector of coeffs, vector of pointers ps | ||||
|     AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	if ( ! converged[s] ) {  | ||||
| 	  if (s==0){ | ||||
| 	    axpy(ps[s],a,ps[s],r); | ||||
| 	  } else{ | ||||
| 	    RealD as =a *z[s][iz]*bs[s] /(z[s][1-iz]*b); | ||||
| 	    axpby(ps[s],z[s][iz],as,r,ps[s]); | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|     AXPYTimer.Stop(); | ||||
|      | ||||
|       cp=c; | ||||
|     MatrixTimer.Start();   | ||||
|     //Linop.HermOpAndNorm(p,mmp,d,qq); // d is used | ||||
|     // The below is faster on KNL | ||||
|     Linop.HermOp(p,mmp);  | ||||
|     d=real(innerProduct(p,mmp)); | ||||
|      | ||||
|     MatrixTimer.Stop();   | ||||
|  | ||||
|     AXPYTimer.Start(); | ||||
|       axpy(mmp,mass[0],p,mmp); | ||||
|     AXPYTimer.Stop(); | ||||
|       RealD rn = norm2(p); | ||||
|       d += rn*mass[0]; | ||||
|      | ||||
|       bp=b; | ||||
|       b=-cp/d; | ||||
|      | ||||
|     AXPYTimer.Start(); | ||||
|       c=axpy_norm(r,b,mmp,r); | ||||
|     AXPYTimer.Stop(); | ||||
|  | ||||
|       // Toggle the recurrence history | ||||
|       bs[0] = b; | ||||
|       iz = 1-iz; | ||||
|     ShiftTimer.Start(); | ||||
|       for(int s=1;s<nshift;s++){ | ||||
| 	if((!converged[s])){ | ||||
| 	  RealD z0 = z[s][1-iz]; | ||||
| 	  RealD z1 = z[s][iz]; | ||||
| 	  z[s][iz] = z0*z1*bp | ||||
| 	    / (b*a*(z1-z0) + z1*bp*(1- (mass[s]-mass[0])*b));  | ||||
| 	  bs[s] = b*z[s][iz]/z0; // NB sign  rel to Mike | ||||
| 	} | ||||
|       } | ||||
|     ShiftTimer.Stop(); | ||||
|      | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	int ss = s; | ||||
| 	// Scope for optimisation here in case of "single". | ||||
| 	// Could load psi[0] and pull all ps[s] in. | ||||
| 	//      if ( single ) ss=primary; | ||||
| 	// Bandwith saving in single case is Ls * 3 -> 2+Ls, so ~ 3x saving | ||||
| 	// Pipelined CG gain: | ||||
| 	// | ||||
| 	// New Kernel: Load r, vector of coeffs, vector of pointers ps | ||||
| 	// New Kernel: Load psi[0], vector of coeffs, vector of pointers ps | ||||
| 	// If can predict the coefficient bs then we can fuse these and avoid write reread cyce | ||||
| 	//  on ps[s]. | ||||
| 	// Before:  3 x npole  + 3 x npole | ||||
| 	// After :  2 x npole (ps[s])        => 3x speed up of multishift CG. | ||||
|        | ||||
| 	if( (!converged[s]) ) {  | ||||
| 	  axpy(psi[ss],-bs[s]*alpha[s],ps[s],psi[ss]); | ||||
| 	} | ||||
|       } | ||||
|      | ||||
|       // Convergence checks | ||||
|       int all_converged = 1; | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| 	  if(css<rsq[s]){ | ||||
| 	    if ( ! converged[s] ) | ||||
| 	      std::cout<<GridLogMessage<<"ConjugateGradientMultiShift k="<<k<<" Shift "<<s<<" has converged"<<std::endl; | ||||
| 	    converged[s]=1; | ||||
| 	  } else { | ||||
| 	    all_converged=0; | ||||
| 	  } | ||||
|  | ||||
| 	} | ||||
|       } | ||||
|      | ||||
|       if ( all_converged ){ | ||||
|  | ||||
|     SolverTimer.Stop(); | ||||
|  | ||||
|  | ||||
| 	std::cout<<GridLogMessage<< "CGMultiShift: All shifts have converged iteration "<<k<<std::endl; | ||||
| 	std::cout<<GridLogMessage<< "CGMultiShift: Checking solutions"<<std::endl; | ||||
|        | ||||
| 	// Check answers  | ||||
| 	for(int s=0; s < nshift; s++) {  | ||||
| 	  Linop.HermOpAndNorm(psi[s],mmp,d,qq); | ||||
| 	  axpy(tmp,mass[s],psi[s],mmp); | ||||
| 	  axpy(r,-alpha[s],src,tmp); | ||||
| 	  RealD rn = norm2(r); | ||||
| 	  RealD cn = norm2(src); | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"CGMultiShift: shift["<<s<<"] true residual "<< TrueResidualShift[s] <<std::endl; | ||||
| 	} | ||||
|  | ||||
|       std::cout << GridLogMessage << "Time Breakdown "<<std::endl; | ||||
|       std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tAXPY     " << AXPYTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tMatrix   " << MatrixTimer.Elapsed()     <<std::endl; | ||||
|       std::cout << GridLogMessage << "\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
|  | ||||
|       IterationsToComplete = k;	 | ||||
|  | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     | ||||
|     } | ||||
|     // ugly hack | ||||
|     std::cout<<GridLogMessage<<"CG multi shift did not converge"<<std::endl; | ||||
|     //  assert(0); | ||||
|   } | ||||
|  | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
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							| @@ -0,0 +1,373 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMultiShift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christopher Kelly <ckelly@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //CK 2020: A variant of the multi-shift conjugate gradient with the matrix multiplication in single precision.  | ||||
| //The residual is stored in single precision, but the search directions and solution are stored in double precision.  | ||||
| //Every update_freq iterations the residual is corrected in double precision.  | ||||
| //For safety the a final regular CG is applied to clean up if necessary | ||||
|  | ||||
| //PB Pure single, then double fixup | ||||
|  | ||||
| template<class FieldD, class FieldF, | ||||
| 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
| 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class ConjugateGradientMultiShiftMixedPrecCleanup : public OperatorMultiFunction<FieldD>, | ||||
| 					     public OperatorFunction<FieldD> | ||||
| { | ||||
| public:                                                 | ||||
|  | ||||
|   using OperatorFunction<FieldD>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterationsMshift; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   int ReliableUpdateFreq; //number of iterations between reliable updates | ||||
|  | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   LinearOperatorBase<FieldF> &Linop_f; //single precision | ||||
|  | ||||
|   ConjugateGradientMultiShiftMixedPrecCleanup(Integer maxit, const MultiShiftFunction &_shifts, | ||||
| 				       GridBase* _SinglePrecGrid, LinearOperatorBase<FieldF> &_Linop_f, | ||||
| 				       int _ReliableUpdateFreq) :  | ||||
|     MaxIterationsMshift(maxit),  shifts(_shifts), SinglePrecGrid(_SinglePrecGrid), Linop_f(_Linop_f), ReliableUpdateFreq(_ReliableUpdateFreq), | ||||
|     MaxIterations(20000) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, FieldD &psi) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     int nshift = shifts.order; | ||||
|     std::vector<FieldD> results(nshift,grid); | ||||
|     (*this)(Linop,src,results,psi); | ||||
|   } | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, std::vector<FieldD> &results, FieldD &psi) | ||||
|   { | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     (*this)(Linop,src,results); | ||||
|    | ||||
|     psi = shifts.norm*src; | ||||
|     for(int i=0;i<nshift;i++){ | ||||
|       psi = psi + shifts.residues[i]*results[i]; | ||||
|     } | ||||
|  | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop_d, const FieldD &src_d, std::vector<FieldD> &psi_d) | ||||
|   {  | ||||
|     GRID_TRACE("ConjugateGradientMultiShiftMixedPrecCleanup"); | ||||
|     GridBase *DoublePrecGrid = src_d.Grid(); | ||||
|  | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     // Convenience references to the info stored in "MultiShiftFunction" | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     std::vector<RealD> &mass(shifts.poles); // Make references to array in "shifts" | ||||
|     std::vector<RealD> &mresidual(shifts.tolerances); | ||||
|     std::vector<RealD> alpha(nshift,1.0); | ||||
|  | ||||
|     //Double precision search directions | ||||
|     FieldD p_d(DoublePrecGrid); | ||||
|     std::vector<FieldF> ps_f (nshift, SinglePrecGrid);// Search directions (single precision) | ||||
|     std::vector<FieldF> psi_f(nshift, SinglePrecGrid);// solutions (single precision) | ||||
|  | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     FieldD r_d(DoublePrecGrid); | ||||
|     FieldF r_f(SinglePrecGrid); | ||||
|     FieldD mmp_d(DoublePrecGrid); | ||||
|  | ||||
|     assert(psi_d.size()==nshift); | ||||
|     assert(mass.size()==nshift); | ||||
|     assert(mresidual.size()==nshift); | ||||
|    | ||||
|     // dynamic sized arrays on stack; 2d is a pain with vector | ||||
|     std::vector<RealD>  bs(nshift); | ||||
|     std::vector<RealD>  rsq(nshift); | ||||
|     std::vector<RealD>  rsqf(nshift); | ||||
|     std::vector<std::array<RealD,2> >  z(nshift); | ||||
|     std::vector<int>     converged(nshift); | ||||
|    | ||||
|     const int       primary =0; | ||||
|    | ||||
|     //Primary shift fields CG iteration | ||||
|     RealD a,b,c,d; | ||||
|     RealD cp,bp,qq; //prev | ||||
|    | ||||
|     // Matrix mult fields | ||||
|     FieldF p_f(SinglePrecGrid); | ||||
|     FieldF mmp_f(SinglePrecGrid); | ||||
|  | ||||
|     // Check lightest mass | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       assert( mass[s]>= mass[primary] ); | ||||
|       converged[s]=0; | ||||
|     } | ||||
|    | ||||
|     // Wire guess to zero | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src_d); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi_d[s] = Zero(); | ||||
| 	psi_f[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       rsqf[s] =rsq[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: shift "<< s <<" target resid "<<rsq[s]<<std::endl; | ||||
|       //      ps_d[s] = src_d; | ||||
|       precisionChange(ps_f[s],src_d); | ||||
|     } | ||||
|     // r and p for primary | ||||
|     p_d = src_d; //primary copy --- make this a reference to ps_d to save axpys | ||||
|     r_d = p_d; | ||||
|      | ||||
|     //MdagM+m[0] | ||||
|     precisionChange(p_f,p_d); | ||||
|     Linop_f.HermOpAndNorm(p_f,mmp_f,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     precisionChange(tmp_d,mmp_f); | ||||
|     Linop_d.HermOpAndNorm(p_d,mmp_d,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     tmp_d = tmp_d - mmp_d; | ||||
|     std::cout << " Testing operators match "<<norm2(mmp_d)<<" f "<<norm2(mmp_f)<<" diff "<< norm2(tmp_d)<<std::endl; | ||||
|     //    assert(norm2(tmp_d)< 1.0e-4); | ||||
|  | ||||
|     axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|     RealD rn = norm2(p_d); | ||||
|     d += rn*mass[0]; | ||||
|  | ||||
|     b = -cp /d; | ||||
|    | ||||
|     // Set up the various shift variables | ||||
|     int       iz=0; | ||||
|     z[0][1-iz] = 1.0; | ||||
|     z[0][iz]   = 1.0; | ||||
|     bs[0]      = b; | ||||
|     for(int s=1;s<nshift;s++){ | ||||
|       z[s][1-iz] = 1.0; | ||||
|       z[s][iz]   = 1.0/( 1.0 - b*(mass[s]-mass[0])); | ||||
|       bs[s]      = b*z[s][iz];  | ||||
|     } | ||||
|    | ||||
|     // r += b[0] A.p[0] | ||||
|     // c= norm(r) | ||||
|     c=axpy_norm(r_d,b,mmp_d,r_d); | ||||
|    | ||||
|     for(int s=0;s<nshift;s++) { | ||||
|       axpby(psi_d[s],0.,-bs[s]*alpha[s],src_d,src_d); | ||||
|       precisionChange(psi_f[s],psi_d[s]); | ||||
|     } | ||||
|    | ||||
|     /////////////////////////////////////// | ||||
|     // Timers | ||||
|     /////////////////////////////////////// | ||||
|     GridStopWatch AXPYTimer, ShiftTimer, QRTimer, MatrixTimer, SolverTimer, PrecChangeTimer, CleanupTimer; | ||||
|  | ||||
|     SolverTimer.Start(); | ||||
|    | ||||
|     // Iteration loop | ||||
|     int k; | ||||
|    | ||||
|     for (k=1;k<=MaxIterationsMshift;k++){     | ||||
|  | ||||
|       a = c /cp; | ||||
|       AXPYTimer.Start(); | ||||
|       axpy(p_d,a,p_d,r_d);  | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(r_f, r_d); | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	if ( ! converged[s] ) {  | ||||
| 	  if (s==0){ | ||||
| 	    axpy(ps_f[s],a,ps_f[s],r_f); | ||||
| 	  } else{ | ||||
| 	    RealD as =a *z[s][iz]*bs[s] /(z[s][1-iz]*b); | ||||
| 	    axpby(ps_f[s],z[s][iz],as,r_f,ps_f[s]); | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       cp=c; | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(p_f, p_d); //get back single prec search direction for linop | ||||
|       PrecChangeTimer.Stop(); | ||||
|       MatrixTimer.Start();   | ||||
|       Linop_f.HermOp(p_f,mmp_f); | ||||
|       MatrixTimer.Stop();   | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(mmp_d, mmp_f); // From Float to Double | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       d=real(innerProduct(p_d,mmp_d));     | ||||
|       axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|       RealD rn = norm2(p_d); | ||||
|       d += rn*mass[0]; | ||||
|      | ||||
|       bp=b; | ||||
|       b=-cp/d; | ||||
|  | ||||
|       // Toggle the recurrence history | ||||
|       bs[0] = b; | ||||
|       iz = 1-iz; | ||||
|       ShiftTimer.Start(); | ||||
|       for(int s=1;s<nshift;s++){ | ||||
| 	if((!converged[s])){ | ||||
| 	  RealD z0 = z[s][1-iz]; | ||||
| 	  RealD z1 = z[s][iz]; | ||||
| 	  z[s][iz] = z0*z1*bp | ||||
| 	    / (b*a*(z1-z0) + z1*bp*(1- (mass[s]-mass[0])*b));  | ||||
| 	  bs[s] = b*z[s][iz]/z0; // NB sign  rel to Mike | ||||
| 	} | ||||
|       } | ||||
|       ShiftTimer.Stop(); | ||||
|  | ||||
|       //Update single precision solutions | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	int ss = s; | ||||
| 	if( (!converged[s]) ) {  | ||||
| 	  axpy(psi_f[ss],-bs[s]*alpha[s],ps_f[s],psi_f[ss]); | ||||
| 	} | ||||
|       } | ||||
|       c = axpy_norm(r_d,b,mmp_d,r_d); | ||||
|       AXPYTimer.Stop(); | ||||
|      | ||||
|       // Convergence checks | ||||
|       int all_converged = 1; | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| 	  if(css<rsqf[s]){ | ||||
| 	    if ( ! converged[s] ) | ||||
| 	      std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup k="<<k<<" Shift "<<s<<" has converged"<<std::endl; | ||||
| 	    converged[s]=1; | ||||
| 	  } else { | ||||
| 	    all_converged=0; | ||||
| 	  } | ||||
|  | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if ( all_converged || k == MaxIterationsMshift-1){ | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	for(int s=0;s<nshift;s++){ | ||||
| 	  precisionChange(psi_d[s],psi_f[s]); | ||||
| 	} | ||||
|  | ||||
| 	 | ||||
| 	if ( all_converged ){ | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: All shifts have converged iteration "<<k<<std::endl; | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: Checking solutions"<<std::endl; | ||||
| 	} else { | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrecCleanup: Not all shifts have converged iteration "<<k<<std::endl; | ||||
| 	} | ||||
| 	 | ||||
| 	// Check answers  | ||||
| 	for(int s=0; s < nshift; s++) {  | ||||
| 	  Linop_d.HermOpAndNorm(psi_d[s],mmp_d,d,qq); | ||||
| 	  axpy(tmp_d,mass[s],psi_d[s],mmp_d); | ||||
| 	  axpy(r_d,-alpha[s],src_d,tmp_d); | ||||
| 	  RealD rn = norm2(r_d); | ||||
| 	  RealD cn = norm2(src_d); | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: shift["<<s<<"] true residual "<< TrueResidualShift[s] << " target " << mresidual[s] << std::endl; | ||||
|  | ||||
| 	  //If we have not reached the desired tolerance, do a (mixed precision) CG cleanup | ||||
| 	  if(rn >= rsq[s]){ | ||||
| 	    CleanupTimer.Start(); | ||||
| 	    std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrecCleanup: performing cleanup step for shift " << s << std::endl; | ||||
|  | ||||
| 	    //Setup linear operators for final cleanup | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldD> Linop_shift_d(Linop_d, mass[s]); | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldF> Linop_shift_f(Linop_f, mass[s]); | ||||
| 					        | ||||
| 	    MixedPrecisionConjugateGradient<FieldD,FieldF> cg(mresidual[s], MaxIterations, MaxIterations, SinglePrecGrid, Linop_shift_f, Linop_shift_d);  | ||||
| 	    cg(src_d, psi_d[s]); | ||||
| 	     | ||||
| 	    TrueResidualShift[s] = cg.TrueResidual; | ||||
| 	    CleanupTimer.Stop(); | ||||
| 	  } | ||||
| 	} | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientMultiShiftMixedPrecCleanup: Time Breakdown for body"<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tAXPY    " << AXPYTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tMatrix    " << MatrixTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tPrecision Change " << PrecChangeTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tFinal Cleanup " << CleanupTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver+Cleanup " << SolverTimer.Elapsed() + CleanupTimer.Elapsed() << std::endl; | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
|  | ||||
| 	return; | ||||
|       } | ||||
|     | ||||
|     } | ||||
|     std::cout<<GridLogMessage<<"CG multi shift did not converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
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								Grid/algorithms/iterative/ConjugateGradientMultiShiftMixedPrec.h
									
									
									
									
									
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							| @@ -0,0 +1,416 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientMultiShift.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Christopher Kelly <ckelly@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_MULTI_SHIFT_MIXEDPREC_H | ||||
| #define GRID_CONJUGATE_GRADIENT_MULTI_SHIFT_MIXEDPREC_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| //CK 2020: A variant of the multi-shift conjugate gradient with the matrix multiplication in single precision.  | ||||
| //The residual is stored in single precision, but the search directions and solution are stored in double precision.  | ||||
| //Every update_freq iterations the residual is corrected in double precision.  | ||||
|      | ||||
| //For safety the a final regular CG is applied to clean up if necessary | ||||
|  | ||||
| //Linop to add shift to input linop, used in cleanup CG | ||||
| namespace ConjugateGradientMultiShiftMixedPrecSupport{ | ||||
| template<typename Field> | ||||
| class ShiftedLinop: public LinearOperatorBase<Field>{ | ||||
| public: | ||||
|   LinearOperatorBase<Field> &linop_base; | ||||
|   RealD shift; | ||||
|  | ||||
|   ShiftedLinop(LinearOperatorBase<Field> &_linop_base, RealD _shift): linop_base(_linop_base), shift(_shift){} | ||||
|  | ||||
|   void OpDiag (const Field &in, Field &out){ assert(0); } | ||||
|   void OpDir  (const Field &in, Field &out,int dir,int disp){ assert(0); } | ||||
|   void OpDirAll  (const Field &in, std::vector<Field> &out){ assert(0); } | ||||
|    | ||||
|   void Op     (const Field &in, Field &out){ assert(0); } | ||||
|   void AdjOp  (const Field &in, Field &out){ assert(0); } | ||||
|  | ||||
|   void HermOp(const Field &in, Field &out){ | ||||
|     linop_base.HermOp(in, out); | ||||
|     axpy(out, shift, in, out); | ||||
|   }     | ||||
|  | ||||
|   void HermOpAndNorm(const Field &in, Field &out,RealD &n1,RealD &n2){ | ||||
|     HermOp(in,out); | ||||
|     ComplexD dot = innerProduct(in,out); | ||||
|     n1=real(dot); | ||||
|     n2=norm2(out); | ||||
|   } | ||||
| }; | ||||
| }; | ||||
|  | ||||
|  | ||||
| template<class FieldD, class FieldF, | ||||
| 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
| 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class ConjugateGradientMultiShiftMixedPrec : public OperatorMultiFunction<FieldD>, | ||||
| 					     public OperatorFunction<FieldD> | ||||
| { | ||||
| public:                                                 | ||||
|  | ||||
|   using OperatorFunction<FieldD>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterationsMshift; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   std::vector<int> IterationsToCompleteShift;  // Iterations for this shift | ||||
|   int verbose; | ||||
|   MultiShiftFunction shifts; | ||||
|   std::vector<RealD> TrueResidualShift; | ||||
|  | ||||
|   int ReliableUpdateFreq; //number of iterations between reliable updates | ||||
|  | ||||
|   GridBase* SinglePrecGrid; //Grid for single-precision fields | ||||
|   LinearOperatorBase<FieldF> &Linop_f; //single precision | ||||
|  | ||||
|   ConjugateGradientMultiShiftMixedPrec(Integer maxit, const MultiShiftFunction &_shifts, | ||||
| 				       GridBase* _SinglePrecGrid, LinearOperatorBase<FieldF> &_Linop_f, | ||||
| 				       int _ReliableUpdateFreq) :  | ||||
|     MaxIterationsMshift(maxit),  shifts(_shifts), SinglePrecGrid(_SinglePrecGrid), Linop_f(_Linop_f), ReliableUpdateFreq(_ReliableUpdateFreq), | ||||
|     MaxIterations(20000) | ||||
|   {  | ||||
|     verbose=1; | ||||
|     IterationsToCompleteShift.resize(_shifts.order); | ||||
|     TrueResidualShift.resize(_shifts.order); | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, FieldD &psi) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     int nshift = shifts.order; | ||||
|     std::vector<FieldD> results(nshift,grid); | ||||
|     (*this)(Linop,src,results,psi); | ||||
|   } | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop, const FieldD &src, std::vector<FieldD> &results, FieldD &psi) | ||||
|   { | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     (*this)(Linop,src,results); | ||||
|    | ||||
|     psi = shifts.norm*src; | ||||
|     for(int i=0;i<nshift;i++){ | ||||
|       psi = psi + shifts.residues[i]*results[i]; | ||||
|     } | ||||
|  | ||||
|     return; | ||||
|   } | ||||
|  | ||||
|   void operator() (LinearOperatorBase<FieldD> &Linop_d, const FieldD &src_d, std::vector<FieldD> &psi_d) | ||||
|   {  | ||||
|     GRID_TRACE("ConjugateGradientMultiShiftMixedPrec"); | ||||
|     GridBase *DoublePrecGrid = src_d.Grid(); | ||||
|  | ||||
|     precisionChangeWorkspace pc_wk_s_to_d(DoublePrecGrid,SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_d_to_s(SinglePrecGrid,DoublePrecGrid); | ||||
|      | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     // Convenience references to the info stored in "MultiShiftFunction" | ||||
|     //////////////////////////////////////////////////////////////////////// | ||||
|     int nshift = shifts.order; | ||||
|  | ||||
|     std::vector<RealD> &mass(shifts.poles); // Make references to array in "shifts" | ||||
|     std::vector<RealD> &mresidual(shifts.tolerances); | ||||
|     std::vector<RealD> alpha(nshift,1.0); | ||||
|  | ||||
|     //Double precision search directions | ||||
|     FieldD p_d(DoublePrecGrid); | ||||
|     std::vector<FieldD> ps_d(nshift, DoublePrecGrid);// Search directions (double precision) | ||||
|  | ||||
|     FieldD tmp_d(DoublePrecGrid); | ||||
|     FieldD r_d(DoublePrecGrid); | ||||
|     FieldD mmp_d(DoublePrecGrid); | ||||
|  | ||||
|     assert(psi_d.size()==nshift); | ||||
|     assert(mass.size()==nshift); | ||||
|     assert(mresidual.size()==nshift); | ||||
|    | ||||
|     // dynamic sized arrays on stack; 2d is a pain with vector | ||||
|     std::vector<RealD>  bs(nshift); | ||||
|     std::vector<RealD>  rsq(nshift); | ||||
|     std::vector<RealD>  rsqf(nshift); | ||||
|     std::vector<std::array<RealD,2> >  z(nshift); | ||||
|     std::vector<int>     converged(nshift); | ||||
|    | ||||
|     const int       primary =0; | ||||
|    | ||||
|     //Primary shift fields CG iteration | ||||
|     RealD a,b,c,d; | ||||
|     RealD cp,bp,qq; //prev | ||||
|    | ||||
|     // Matrix mult fields | ||||
|     FieldF p_f(SinglePrecGrid); | ||||
|     FieldF mmp_f(SinglePrecGrid); | ||||
|  | ||||
|     // Check lightest mass | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       assert( mass[s]>= mass[primary] ); | ||||
|       converged[s]=0; | ||||
|     } | ||||
|    | ||||
|     // Wire guess to zero | ||||
|     // Residuals "r" are src | ||||
|     // First search direction "p" is also src | ||||
|     cp = norm2(src_d); | ||||
|  | ||||
|     // Handle trivial case of zero src. | ||||
|     if( cp == 0. ){ | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	psi_d[s] = Zero(); | ||||
| 	IterationsToCompleteShift[s] = 1; | ||||
| 	TrueResidualShift[s] = 0.; | ||||
|       } | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     for(int s=0;s<nshift;s++){ | ||||
|       rsq[s] = cp * mresidual[s] * mresidual[s]; | ||||
|       rsqf[s] =rsq[s]; | ||||
|       std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: shift "<< s <<" target resid "<<rsq[s]<<std::endl; | ||||
|       ps_d[s] = src_d; | ||||
|     } | ||||
|     // r and p for primary | ||||
|     p_d = src_d; //primary copy --- make this a reference to ps_d to save axpys | ||||
|     r_d = p_d; | ||||
|      | ||||
|     //MdagM+m[0] | ||||
|     precisionChange(p_f, p_d, pc_wk_d_to_s); | ||||
|  | ||||
|     Linop_f.HermOpAndNorm(p_f,mmp_f,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     precisionChange(tmp_d, mmp_f, pc_wk_s_to_d); | ||||
|     Linop_d.HermOpAndNorm(p_d,mmp_d,d,qq); // mmp = MdagM p        d=real(dot(p, mmp)),  qq=norm2(mmp) | ||||
|     tmp_d = tmp_d - mmp_d; | ||||
|     std::cout << " Testing operators match "<<norm2(mmp_d)<<" f "<<norm2(mmp_f)<<" diff "<< norm2(tmp_d)<<std::endl; | ||||
|     assert(norm2(tmp_d)< 1.0); | ||||
|  | ||||
|     axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|     RealD rn = norm2(p_d); | ||||
|     d += rn*mass[0]; | ||||
|  | ||||
|     b = -cp /d; | ||||
|    | ||||
|     // Set up the various shift variables | ||||
|     int       iz=0; | ||||
|     z[0][1-iz] = 1.0; | ||||
|     z[0][iz]   = 1.0; | ||||
|     bs[0]      = b; | ||||
|     for(int s=1;s<nshift;s++){ | ||||
|       z[s][1-iz] = 1.0; | ||||
|       z[s][iz]   = 1.0/( 1.0 - b*(mass[s]-mass[0])); | ||||
|       bs[s]      = b*z[s][iz];  | ||||
|     } | ||||
|    | ||||
|     // r += b[0] A.p[0] | ||||
|     // c= norm(r) | ||||
|     c=axpy_norm(r_d,b,mmp_d,r_d); | ||||
|    | ||||
|     for(int s=0;s<nshift;s++) { | ||||
|       axpby(psi_d[s],0.,-bs[s]*alpha[s],src_d,src_d); | ||||
|     } | ||||
|    | ||||
|     /////////////////////////////////////// | ||||
|     // Timers | ||||
|     /////////////////////////////////////// | ||||
|     GridStopWatch AXPYTimer, ShiftTimer, QRTimer, MatrixTimer, SolverTimer, PrecChangeTimer, CleanupTimer; | ||||
|  | ||||
|     SolverTimer.Start(); | ||||
|    | ||||
|     // Iteration loop | ||||
|     int k; | ||||
|    | ||||
|     for (k=1;k<=MaxIterationsMshift;k++){     | ||||
|  | ||||
|       a = c /cp; | ||||
|       AXPYTimer.Start(); | ||||
|       axpy(p_d,a,p_d,r_d);  | ||||
|  | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	if ( ! converged[s] ) {  | ||||
| 	  if (s==0){ | ||||
| 	    axpy(ps_d[s],a,ps_d[s],r_d); | ||||
| 	  } else{ | ||||
| 	    RealD as =a *z[s][iz]*bs[s] /(z[s][1-iz]*b); | ||||
| 	    axpby(ps_d[s],z[s][iz],as,r_d,ps_d[s]); | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(p_f, p_d, pc_wk_d_to_s); //get back single prec search direction for linop | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       cp=c; | ||||
|       MatrixTimer.Start();   | ||||
|       Linop_f.HermOp(p_f,mmp_f); | ||||
|       MatrixTimer.Stop();   | ||||
|  | ||||
|       PrecChangeTimer.Start(); | ||||
|       precisionChange(mmp_d, mmp_f, pc_wk_s_to_d); // From Float to Double | ||||
|       PrecChangeTimer.Stop(); | ||||
|  | ||||
|       AXPYTimer.Start(); | ||||
|       d=real(innerProduct(p_d,mmp_d));     | ||||
|       axpy(mmp_d,mass[0],p_d,mmp_d); | ||||
|       AXPYTimer.Stop(); | ||||
|       RealD rn = norm2(p_d); | ||||
|       d += rn*mass[0]; | ||||
|      | ||||
|       bp=b; | ||||
|       b=-cp/d; | ||||
|  | ||||
|       // Toggle the recurrence history | ||||
|       bs[0] = b; | ||||
|       iz = 1-iz; | ||||
|       ShiftTimer.Start(); | ||||
|       for(int s=1;s<nshift;s++){ | ||||
| 	if((!converged[s])){ | ||||
| 	  RealD z0 = z[s][1-iz]; | ||||
| 	  RealD z1 = z[s][iz]; | ||||
| 	  z[s][iz] = z0*z1*bp | ||||
| 	    / (b*a*(z1-z0) + z1*bp*(1- (mass[s]-mass[0])*b));  | ||||
| 	  bs[s] = b*z[s][iz]/z0; // NB sign  rel to Mike | ||||
| 	} | ||||
|       } | ||||
|       ShiftTimer.Stop(); | ||||
|  | ||||
|       //Update double precision solutions | ||||
|       AXPYTimer.Start(); | ||||
|       for(int s=0;s<nshift;s++){ | ||||
| 	int ss = s; | ||||
| 	if( (!converged[s]) ) {  | ||||
| 	  axpy(psi_d[ss],-bs[s]*alpha[s],ps_d[s],psi_d[ss]); | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       //Perform reliable update if necessary; otherwise update residual from single-prec mmp | ||||
|       c = axpy_norm(r_d,b,mmp_d,r_d); | ||||
|  | ||||
|       AXPYTimer.Stop(); | ||||
|  | ||||
|       if(k % ReliableUpdateFreq == 0){ | ||||
| 	RealD c_old = c; | ||||
| 	//Replace r with true residual | ||||
| 	MatrixTimer.Start();   | ||||
| 	Linop_d.HermOp(psi_d[0],mmp_d);  | ||||
| 	MatrixTimer.Stop();   | ||||
|  | ||||
| 	AXPYTimer.Start(); | ||||
| 	axpy(mmp_d,mass[0],psi_d[0],mmp_d); | ||||
|  | ||||
| 	c = axpy_norm(r_d, -1.0, mmp_d, src_d); | ||||
| 	AXPYTimer.Stop(); | ||||
|  | ||||
| 	std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec k="<<k<< ", replaced |r|^2 = "<<c_old <<" with |r|^2 = "<<c<<std::endl; | ||||
|       } | ||||
|      | ||||
|       // Convergence checks | ||||
|       int all_converged = 1; | ||||
|       for(int s=0;s<nshift;s++){ | ||||
|        | ||||
| 	if ( (!converged[s]) ){ | ||||
| 	  IterationsToCompleteShift[s] = k; | ||||
| 	 | ||||
| 	  RealD css  = c * z[s][iz]* z[s][iz]; | ||||
| 	 | ||||
| 	  if(css<rsqf[s]){ | ||||
| 	    if ( ! converged[s] ) | ||||
| 	      std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec k="<<k<<" Shift "<<s<<" has converged"<<std::endl; | ||||
| 	    converged[s]=1; | ||||
| 	  } else { | ||||
| 	    all_converged=0; | ||||
| 	  } | ||||
|  | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if ( all_converged || k == MaxIterationsMshift-1){ | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	if ( all_converged ){ | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: All shifts have converged iteration "<<k<<std::endl; | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: Checking solutions"<<std::endl; | ||||
| 	} else { | ||||
| 	  std::cout<<GridLogMessage<< "ConjugateGradientMultiShiftMixedPrec: Not all shifts have converged iteration "<<k<<std::endl; | ||||
| 	} | ||||
| 	 | ||||
| 	// Check answers  | ||||
| 	for(int s=0; s < nshift; s++) {  | ||||
| 	  Linop_d.HermOpAndNorm(psi_d[s],mmp_d,d,qq); | ||||
| 	  axpy(tmp_d,mass[s],psi_d[s],mmp_d); | ||||
| 	  axpy(r_d,-alpha[s],src_d,tmp_d); | ||||
| 	  RealD rn = norm2(r_d); | ||||
| 	  RealD cn = norm2(src_d); | ||||
| 	  TrueResidualShift[s] = std::sqrt(rn/cn); | ||||
| 	  std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: shift["<<s<<"] true residual "<< TrueResidualShift[s] << " target " << mresidual[s] << std::endl; | ||||
|  | ||||
| 	  //If we have not reached the desired tolerance, do a (mixed precision) CG cleanup | ||||
| 	  if(rn >= rsq[s]){ | ||||
| 	    CleanupTimer.Start(); | ||||
| 	    std::cout<<GridLogMessage<<"ConjugateGradientMultiShiftMixedPrec: performing cleanup step for shift " << s << std::endl; | ||||
|  | ||||
| 	    //Setup linear operators for final cleanup | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldD> Linop_shift_d(Linop_d, mass[s]); | ||||
| 	    ConjugateGradientMultiShiftMixedPrecSupport::ShiftedLinop<FieldF> Linop_shift_f(Linop_f, mass[s]); | ||||
| 					        | ||||
| 	    MixedPrecisionConjugateGradient<FieldD,FieldF> cg(mresidual[s], MaxIterations, MaxIterations, SinglePrecGrid, Linop_shift_f, Linop_shift_d);  | ||||
| 	    cg(src_d, psi_d[s]); | ||||
| 	     | ||||
| 	    TrueResidualShift[s] = cg.TrueResidual; | ||||
| 	    CleanupTimer.Stop(); | ||||
| 	  } | ||||
| 	} | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientMultiShiftMixedPrec: Time Breakdown for body"<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver    " << SolverTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tAXPY    " << AXPYTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tMatrix    " << MatrixTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tShift    " << ShiftTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\t\tPrecision Change " << PrecChangeTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tFinal Cleanup " << CleanupTimer.Elapsed()     <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tSolver+Cleanup " << SolverTimer.Elapsed() + CleanupTimer.Elapsed() << std::endl; | ||||
|  | ||||
| 	IterationsToComplete = k;	 | ||||
|  | ||||
| 	return; | ||||
|       } | ||||
|     | ||||
|     } | ||||
|     std::cout<<GridLogMessage<<"CG multi shift did not converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										277
									
								
								Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										277
									
								
								Grid/algorithms/iterative/ConjugateGradientReliableUpdate.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,277 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateGradientReliableUpdate.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christopher Kelly <ckelly@phys.columbia.edu> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | ||||
| #define GRID_CONJUGATE_GRADIENT_RELIABLE_UPDATE_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class FieldD,class FieldF,  | ||||
| 	 typename std::enable_if< getPrecision<FieldD>::value == 2, int>::type = 0, | ||||
| 	 typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0>  | ||||
| class ConjugateGradientReliableUpdate : public LinearFunction<FieldD> { | ||||
| public: | ||||
|   bool ErrorOnNoConverge;  // throw an assert when the CG fails to converge. | ||||
|   // Defaults true. | ||||
|   RealD Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationsToComplete; //Number of iterations the CG took to finish. Filled in upon completion | ||||
|   Integer ReliableUpdatesPerformed; | ||||
|  | ||||
|   bool DoFinalCleanup; //Final DP cleanup, defaults to true | ||||
|   Integer IterationsToCleanup; //Final DP cleanup step iterations | ||||
|      | ||||
|   LinearOperatorBase<FieldF> &Linop_f; | ||||
|   LinearOperatorBase<FieldD> &Linop_d; | ||||
|   GridBase* SinglePrecGrid; | ||||
|   RealD Delta; //reliable update parameter. A reliable update is performed when the residual drops by a factor of Delta relative to its value at the last update | ||||
|  | ||||
|   //Optional ability to switch to a different linear operator once the tolerance reaches a certain point. Useful for single/half -> single/single | ||||
|   LinearOperatorBase<FieldF> *Linop_fallback; | ||||
|   RealD fallback_transition_tol; | ||||
|  | ||||
|      | ||||
|   ConjugateGradientReliableUpdate(RealD tol, Integer maxit, RealD _delta, GridBase* _sp_grid, LinearOperatorBase<FieldF> &_Linop_f, LinearOperatorBase<FieldD> &_Linop_d, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), | ||||
|       MaxIterations(maxit), | ||||
|       Delta(_delta), | ||||
|       Linop_f(_Linop_f), | ||||
|       Linop_d(_Linop_d), | ||||
|       SinglePrecGrid(_sp_grid), | ||||
|       ErrorOnNoConverge(err_on_no_conv), | ||||
|       DoFinalCleanup(true), | ||||
|       Linop_fallback(NULL) | ||||
|   { | ||||
|     assert(Delta > 0. && Delta < 1. && "Expect  0 < Delta < 1"); | ||||
|   }; | ||||
|  | ||||
|   void setFallbackLinop(LinearOperatorBase<FieldF> &_Linop_fallback, const RealD _fallback_transition_tol){ | ||||
|     Linop_fallback = &_Linop_fallback; | ||||
|     fallback_transition_tol = _fallback_transition_tol;       | ||||
|   } | ||||
|      | ||||
|   void operator()(const FieldD &src, FieldD &psi) { | ||||
|     GRID_TRACE("ConjugateGradientReliableUpdate"); | ||||
|     LinearOperatorBase<FieldF> *Linop_f_use = &Linop_f; | ||||
|     bool using_fallback = false; | ||||
|        | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD cp, c, a, d, b, ssq, qq, b_pred; | ||||
|  | ||||
|     FieldD p(src); | ||||
|     FieldD mmp(src); | ||||
|     FieldD r(src); | ||||
|  | ||||
|     // Initial residual computation & set up | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|      | ||||
|     Linop_d.HermOpAndNorm(psi, mmp, d, b); | ||||
|      | ||||
|     r = src - mmp; | ||||
|     p = r; | ||||
|  | ||||
|     a = norm2(p); | ||||
|     cp = a; | ||||
|     ssq = norm2(src); | ||||
|  | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate:   src " << ssq << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate:    mp " << d << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate:   mmp " << b << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate:  cp,r " << cp << std::endl; | ||||
|     std::cout << GridLogIterative << std::setprecision(4) << "ConjugateGradientReliableUpdate:     p " << a << std::endl; | ||||
|  | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     // Check if guess is really REALLY good :) | ||||
|     if (cp <= rsq) { | ||||
|       std::cout << GridLogMessage << "ConjugateGradientReliableUpdate guess was REALLY good\n"; | ||||
|       std::cout << GridLogMessage << "\tComputed residual " << std::sqrt(cp / ssq)<<std::endl; | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     //Single prec initialization | ||||
|     precisionChangeWorkspace pc_wk_sp_to_dp(src.Grid(), SinglePrecGrid); | ||||
|     precisionChangeWorkspace pc_wk_dp_to_sp(SinglePrecGrid, src.Grid()); | ||||
|      | ||||
|     FieldF r_f(SinglePrecGrid); | ||||
|     r_f.Checkerboard() = r.Checkerboard(); | ||||
|     precisionChange(r_f, r, pc_wk_dp_to_sp); | ||||
|  | ||||
|     FieldF psi_f(r_f); | ||||
|     psi_f = Zero(); | ||||
|  | ||||
|     FieldF p_f(r_f); | ||||
|     FieldF mmp_f(r_f); | ||||
|  | ||||
|     RealD MaxResidSinceLastRelUp = cp; //initial residual     | ||||
|      | ||||
|     std::cout << GridLogIterative << std::setprecision(4) | ||||
| 	      << "ConjugateGradient: k=0 residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|     GridStopWatch LinalgTimer; | ||||
|     GridStopWatch MatrixTimer; | ||||
|     GridStopWatch SolverTimer; | ||||
|     GridStopWatch PrecChangeTimer; | ||||
|      | ||||
|     SolverTimer.Start(); | ||||
|     int k = 0; | ||||
|     int l = 0; | ||||
|      | ||||
|     for (k = 1; k <= MaxIterations; k++) { | ||||
|       c = cp; | ||||
|  | ||||
|       MatrixTimer.Start(); | ||||
|       Linop_f_use->HermOpAndNorm(p_f, mmp_f, d, qq); | ||||
|       MatrixTimer.Stop(); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       a = c / d; | ||||
|       b_pred = a * (a * qq - d) / c; | ||||
|  | ||||
|       cp = axpy_norm(r_f, -a, mmp_f, r_f); | ||||
|       b = cp / c; | ||||
|  | ||||
|       // Fuse these loops ; should be really easy | ||||
|       psi_f = a * p_f + psi_f; | ||||
|       //p_f = p_f * b + r_f; | ||||
|  | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       std::cout << GridLogIterative << "ConjugateGradientReliableUpdate: Iteration " << k | ||||
| 		<< " residual " << cp << " target " << rsq << std::endl; | ||||
|       std::cout << GridLogDebug << "a = "<< a << " b_pred = "<< b_pred << "  b = "<< b << std::endl; | ||||
|       std::cout << GridLogDebug << "qq = "<< qq << " d = "<< d << "  c = "<< c << std::endl; | ||||
|  | ||||
|       if(cp > MaxResidSinceLastRelUp){ | ||||
| 	std::cout << GridLogIterative << "ConjugateGradientReliableUpdate: updating MaxResidSinceLastRelUp : " << MaxResidSinceLastRelUp << " -> " << cp << std::endl; | ||||
| 	MaxResidSinceLastRelUp = cp; | ||||
|       } | ||||
| 	   | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
| 	//Although not written in the paper, I assume that I have to add on the final solution | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(mmp, psi_f, pc_wk_sp_to_dp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	psi = psi + mmp; | ||||
| 	 | ||||
| 	 | ||||
| 	SolverTimer.Stop(); | ||||
| 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | ||||
| 	p = mmp - src; | ||||
|  | ||||
| 	RealD srcnorm = std::sqrt(norm2(src)); | ||||
| 	RealD resnorm = std::sqrt(norm2(p)); | ||||
| 	RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate Converged on iteration " << k << " after " << l << " reliable updates" << std::endl; | ||||
| 	std::cout << GridLogMessage << "\tComputed residual " << std::sqrt(cp / ssq)<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tTrue residual " << true_residual<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tTarget " << Tolerance << std::endl; | ||||
|  | ||||
| 	std::cout << GridLogMessage << "Time breakdown "<<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tElapsed    " << SolverTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tMatrix     " << MatrixTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tLinalg     " << LinalgTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tPrecChange " << PrecChangeTimer.Elapsed() <<std::endl; | ||||
| 	std::cout << GridLogMessage << "\tPrecChange avg time " << PrecChangeTimer.Elapsed()/(2*l+1) <<std::endl; | ||||
|  | ||||
| 	 | ||||
| 	IterationsToComplete = k;	 | ||||
| 	ReliableUpdatesPerformed = l; | ||||
| 	   | ||||
| 	if(DoFinalCleanup){ | ||||
| 	  //Do a final CG to cleanup | ||||
| 	  std::cout << GridLogMessage << "ConjugateGradientReliableUpdate performing final cleanup.\n"; | ||||
| 	  ConjugateGradient<FieldD> CG(Tolerance,MaxIterations); | ||||
| 	  CG.ErrorOnNoConverge = ErrorOnNoConverge; | ||||
| 	  CG(Linop_d,src,psi); | ||||
| 	  IterationsToCleanup = CG.IterationsToComplete; | ||||
| 	} | ||||
| 	else if (ErrorOnNoConverge) assert(true_residual / Tolerance < 10000.0); | ||||
|  | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate complete.\n"; | ||||
| 	return; | ||||
|       } | ||||
|       else if(cp < Delta * MaxResidSinceLastRelUp) { //reliable update | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate " | ||||
| 		  << cp << "(residual) < " << Delta << "(Delta) * " << MaxResidSinceLastRelUp << "(MaxResidSinceLastRelUp) on iteration " << k << " : performing reliable update\n"; | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(mmp, psi_f, pc_wk_sp_to_dp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	psi = psi + mmp; | ||||
|  | ||||
| 	MatrixTimer.Start(); | ||||
| 	Linop_d.HermOpAndNorm(psi, mmp, d, qq); | ||||
| 	MatrixTimer.Stop(); | ||||
| 	 | ||||
| 	r = src - mmp; | ||||
|  | ||||
| 	psi_f = Zero(); | ||||
| 	PrecChangeTimer.Start(); | ||||
| 	precisionChange(r_f, r, pc_wk_dp_to_sp); | ||||
| 	PrecChangeTimer.Stop(); | ||||
| 	cp = norm2(r); | ||||
| 	MaxResidSinceLastRelUp = cp; | ||||
|  | ||||
| 	b = cp/c; | ||||
| 	   | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate new residual " << cp << std::endl; | ||||
| 	   | ||||
| 	l = l+1; | ||||
|       } | ||||
|  | ||||
|       p_f = p_f * b + r_f; //update search vector after reliable update appears to help convergence | ||||
|  | ||||
|       if(!using_fallback && Linop_fallback != NULL && cp < fallback_transition_tol){ | ||||
| 	std::cout << GridLogMessage << "ConjugateGradientReliableUpdate switching to fallback linear operator on iteration " << k << " at residual " << cp << std::endl; | ||||
| 	Linop_f_use = Linop_fallback; | ||||
| 	using_fallback = true; | ||||
|       } | ||||
|  | ||||
| 	 | ||||
|     } | ||||
|     std::cout << GridLogMessage << "ConjugateGradientReliableUpdate did NOT converge" | ||||
| 	      << std::endl; | ||||
|        | ||||
|     if (ErrorOnNoConverge) assert(0); | ||||
|     IterationsToComplete = k; | ||||
|     ReliableUpdatesPerformed = l;       | ||||
|   }     | ||||
| }; | ||||
|  | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										113
									
								
								Grid/algorithms/iterative/ConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										113
									
								
								Grid/algorithms/iterative/ConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,113 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ConjugateResidual.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CONJUGATE_RESIDUAL_H | ||||
| #define GRID_CONJUGATE_RESIDUAL_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
| template<class Field>  | ||||
| class ConjugateResidual : public OperatorFunction<Field> { | ||||
| public:                                                 | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|  | ||||
|   ConjugateResidual(RealD tol,Integer maxit) : Tolerance(tol), MaxIterations(maxit) {  | ||||
|     verbose=0; | ||||
|   }; | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop,const Field &src, Field &psi){ | ||||
|  | ||||
|     RealD a, b; // c, d; | ||||
|     RealD cp, ssq,rsq; | ||||
|        | ||||
|     RealD rAr, rAAr, rArp; | ||||
|     RealD pAp, pAAp; | ||||
|  | ||||
|     GridBase *grid = src.Grid(); | ||||
|     psi=Zero(); | ||||
|     Field r(grid),  p(grid), Ap(grid), Ar(grid); | ||||
|        | ||||
|     r=src; | ||||
|     p=src; | ||||
|  | ||||
|     Linop.HermOpAndNorm(p,Ap,pAp,pAAp); | ||||
|     Linop.HermOpAndNorm(r,Ar,rAr,rAAr); | ||||
|  | ||||
|     cp =norm2(r); | ||||
|     ssq=norm2(src); | ||||
|     rsq=Tolerance*Tolerance*ssq; | ||||
|  | ||||
|     if (verbose) std::cout<<GridLogMessage<<"ConjugateResidual: iteration " <<0<<" residual "<<cp<< " target"<< rsq<<std::endl; | ||||
|  | ||||
|     for(int k=1;k<MaxIterations;k++){ | ||||
|  | ||||
|       a = rAr/pAAp; | ||||
|  | ||||
|       axpy(psi,a,p,psi); | ||||
|  | ||||
|       cp = axpy_norm(r,-a,Ap,r); | ||||
|  | ||||
|       rArp=rAr; | ||||
|  | ||||
|       Linop.HermOpAndNorm(r,Ar,rAr,rAAr); | ||||
|  | ||||
|       b   =rAr/rArp; | ||||
|   | ||||
|       axpy(p,b,p,r); | ||||
|       pAAp=axpy_norm(Ap,b,Ap,Ar); | ||||
| 	 | ||||
|       if(verbose) std::cout<<GridLogMessage<<"ConjugateResidual: iteration " <<k<<" residual "<<cp<< " target"<< rsq<<std::endl; | ||||
|  | ||||
|       if(cp<rsq) { | ||||
| 	Linop.HermOp(psi,Ap); | ||||
| 	axpy(r,-1.0,src,Ap); | ||||
| 	RealD true_resid = norm2(r)/ssq; | ||||
| 	std::cout<<GridLogMessage<<"ConjugateResidual: Converged on iteration " <<k | ||||
| 		 << " computed residual "<<std::sqrt(cp/ssq) | ||||
| 		 << " true residual "<<std::sqrt(true_resid) | ||||
| 		 << " target "       <<Tolerance <<std::endl; | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|  | ||||
|     std::cout<<GridLogMessage<<"ConjugateResidual did NOT converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -0,0 +1,258 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/FlexibleCommunicationAvoidingGeneralisedMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||
| #define GRID_FLEXIBLE_COMMUNICATION_AVOIDING_GENERALISED_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class Field> | ||||
| class FlexibleCommunicationAvoidingGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // Throw an assert when FCAGMRES fails to converge, | ||||
|                           // defaults to true | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|  | ||||
|   Integer MaxIterations; | ||||
|   Integer RestartLength; | ||||
|   Integer MaxNumberOfRestarts; | ||||
|   Integer IterationCount; // Number of iterations the FCAGMRES took to finish, | ||||
|                           // filled in upon completion | ||||
|  | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|   GridStopWatch QrTimer; | ||||
|   GridStopWatch CompSolutionTimer; | ||||
|  | ||||
|   Eigen::MatrixXcd H; | ||||
|  | ||||
|   std::vector<ComplexD> y; | ||||
|   std::vector<ComplexD> gamma; | ||||
|   std::vector<ComplexD> c; | ||||
|   std::vector<ComplexD> s; | ||||
|  | ||||
|   LinearFunction<Field> &Preconditioner; | ||||
|  | ||||
|   FlexibleCommunicationAvoidingGeneralisedMinimalResidual(RealD   tol, | ||||
|                                                           Integer maxit, | ||||
|                                                           LinearFunction<Field> &Prec, | ||||
|                                                           Integer restart_length, | ||||
|                                                           bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , RestartLength(restart_length) | ||||
|       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||
|       , ErrorOnNoConverge(err_on_no_conv) | ||||
|       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||
|       , y(RestartLength + 1, 0.) | ||||
|       , gamma(RestartLength + 1, 0.) | ||||
|       , c(RestartLength + 1, 0.) | ||||
|       , s(RestartLength + 1, 0.) | ||||
|       , Preconditioner(Prec) {}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||
|  | ||||
|     std::cout << GridLogWarning << "This algorithm currently doesn't differ from regular FGMRES" << std::endl; | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatrixTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|     QrTimer.Reset(); | ||||
|     CompSolutionTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     IterationCount = 0; | ||||
|  | ||||
|     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||
|  | ||||
|       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|  | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         LinOp.Op(psi,r); | ||||
|         axpy(r,-1.0,src,r); | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Precon  " <<         PrecTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FCAGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||
|  | ||||
|     RealD cp = 0; | ||||
|  | ||||
|     Field w(src.Grid()); | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     // these should probably be made class members so that they are only allocated once, not in every restart | ||||
|     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||
|     std::vector<Field> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(psi, w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r = src - w; | ||||
|  | ||||
|     gamma[0] = sqrt(norm2(r)); | ||||
|  | ||||
|     v[0] = (1. / gamma[0]) * r; | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for (int i=0; i<RestartLength; i++) { | ||||
|  | ||||
|       IterationCount++; | ||||
|  | ||||
|       arnoldiStep(LinOp, v, z, w, i); | ||||
|  | ||||
|       qrUpdate(i); | ||||
|  | ||||
|       cp = norm(gamma[i+1]); | ||||
|  | ||||
|       std::cout << GridLogIterative << "FlexibleCommunicationAvoidingGeneralisedMinimalResidual: Iteration " << IterationCount | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||
|  | ||||
|         computeSolution(z, psi, i); | ||||
|  | ||||
|         return cp; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     assert(0); // Never reached | ||||
|     return cp; | ||||
|   } | ||||
|  | ||||
|   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) { | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(v[iter], z[iter]); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(z[iter], w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     for (int i = 0; i <= iter; ++i) { | ||||
|       H(iter, i) = innerProduct(v[i], w); | ||||
|       w = w - ComplexD(H(iter, i)) * v[i]; | ||||
|     } | ||||
|  | ||||
|     H(iter, iter + 1) = sqrt(norm2(w)); | ||||
|     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||
|     LinalgTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void qrUpdate(int iter) { | ||||
|  | ||||
|     QrTimer.Start(); | ||||
|     for (int i = 0; i < iter ; ++i) { | ||||
|       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i + 1) = tmp; | ||||
|     } | ||||
|  | ||||
|     // Compute new Givens Rotation | ||||
|     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||
|     c[iter]     = H(iter, iter) / nu; | ||||
|     s[iter]     = H(iter, iter + 1) / nu; | ||||
|  | ||||
|     // Apply new Givens rotation | ||||
|     H(iter, iter)     = nu; | ||||
|     H(iter, iter + 1) = 0.; | ||||
|  | ||||
|     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||
|     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||
|     QrTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void computeSolution(std::vector<Field> const &z, Field &psi, int iter) { | ||||
|  | ||||
|     CompSolutionTimer.Start(); | ||||
|     for (int i = iter; i >= 0; i--) { | ||||
|       y[i] = gamma[i]; | ||||
|       for (int k = i + 1; k <= iter; k++) | ||||
|         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||
|       y[i] = y[i] / ComplexD(H(i, i)); | ||||
|     } | ||||
|  | ||||
|     for (int i = 0; i <= iter; i++) | ||||
|       psi = psi + z[i] * y[i]; | ||||
|     CompSolutionTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
| } | ||||
| #endif | ||||
							
								
								
									
										256
									
								
								Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										256
									
								
								Grid/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,256 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/FlexibleGeneralisedMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||
| #define GRID_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class Field> | ||||
| class FlexibleGeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // Throw an assert when FGMRES fails to converge, | ||||
|                           // defaults to true | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|  | ||||
|   Integer MaxIterations; | ||||
|   Integer RestartLength; | ||||
|   Integer MaxNumberOfRestarts; | ||||
|   Integer IterationCount; // Number of iterations the FGMRES took to finish, | ||||
|                           // filled in upon completion | ||||
|  | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|   GridStopWatch QrTimer; | ||||
|   GridStopWatch CompSolutionTimer; | ||||
|  | ||||
|   Eigen::MatrixXcd H; | ||||
|  | ||||
|   std::vector<ComplexD> y; | ||||
|   std::vector<ComplexD> gamma; | ||||
|   std::vector<ComplexD> c; | ||||
|   std::vector<ComplexD> s; | ||||
|  | ||||
|   LinearFunction<Field> &Preconditioner; | ||||
|  | ||||
|   FlexibleGeneralisedMinimalResidual(RealD   tol, | ||||
|                                      Integer maxit, | ||||
|                                      LinearFunction<Field> &Prec, | ||||
|                                      Integer restart_length, | ||||
|                                      bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , RestartLength(restart_length) | ||||
|       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||
|       , ErrorOnNoConverge(err_on_no_conv) | ||||
|       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||
|       , y(RestartLength + 1, 0.) | ||||
|       , gamma(RestartLength + 1, 0.) | ||||
|       , c(RestartLength + 1, 0.) | ||||
|       , s(RestartLength + 1, 0.) | ||||
|       , Preconditioner(Prec) {}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatrixTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|     QrTimer.Reset(); | ||||
|     CompSolutionTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     IterationCount = 0; | ||||
|  | ||||
|     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||
|  | ||||
|       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|  | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         LinOp.Op(psi,r); | ||||
|         axpy(r,-1.0,src,r); | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "FlexibleGeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: Precon  " <<         PrecTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "FGMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "FlexibleGeneralisedMinimalResidual did NOT converge" << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||
|  | ||||
|     RealD cp = 0; | ||||
|  | ||||
|     Field w(src.Grid()); | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     // these should probably be made class members so that they are only allocated once, not in every restart | ||||
|     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||
|     std::vector<Field> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(psi, w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r = src - w; | ||||
|  | ||||
|     gamma[0] = sqrt(norm2(r)); | ||||
|  | ||||
|     v[0] = (1. / gamma[0]) * r; | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for (int i=0; i<RestartLength; i++) { | ||||
|  | ||||
|       IterationCount++; | ||||
|  | ||||
|       arnoldiStep(LinOp, v, z, w, i); | ||||
|  | ||||
|       qrUpdate(i); | ||||
|  | ||||
|       cp = norm(gamma[i+1]); | ||||
|  | ||||
|       std::cout << GridLogIterative << "FlexibleGeneralisedMinimalResidual: Iteration " << IterationCount | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||
|  | ||||
|         computeSolution(z, psi, i); | ||||
|  | ||||
|         return cp; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     assert(0); // Never reached | ||||
|     return cp; | ||||
|   } | ||||
|  | ||||
|   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, std::vector<Field> &z, Field &w, int iter) { | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(v[iter], z[iter]); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(z[iter], w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     for (int i = 0; i <= iter; ++i) { | ||||
|       H(iter, i) = innerProduct(v[i], w); | ||||
|       w = w - ComplexD(H(iter, i)) * v[i]; | ||||
|     } | ||||
|  | ||||
|     H(iter, iter + 1) = sqrt(norm2(w)); | ||||
|     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||
|     LinalgTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void qrUpdate(int iter) { | ||||
|  | ||||
|     QrTimer.Start(); | ||||
|     for (int i = 0; i < iter ; ++i) { | ||||
|       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i + 1) = tmp; | ||||
|     } | ||||
|  | ||||
|     // Compute new Givens Rotation | ||||
|     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||
|     c[iter]     = H(iter, iter) / nu; | ||||
|     s[iter]     = H(iter, iter + 1) / nu; | ||||
|  | ||||
|     // Apply new Givens rotation | ||||
|     H(iter, iter)     = nu; | ||||
|     H(iter, iter + 1) = 0.; | ||||
|  | ||||
|     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||
|     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||
|     QrTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void computeSolution(std::vector<Field> const &z, Field &psi, int iter) { | ||||
|  | ||||
|     CompSolutionTimer.Start(); | ||||
|     for (int i = iter; i >= 0; i--) { | ||||
|       y[i] = gamma[i]; | ||||
|       for (int k = i + 1; k <= iter; k++) | ||||
|         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||
|       y[i] = y[i] / ComplexD(H(i, i)); | ||||
|     } | ||||
|  | ||||
|     for (int i = 0; i <= iter; i++) | ||||
|       psi = psi + z[i] * y[i]; | ||||
|     CompSolutionTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
| } | ||||
| #endif | ||||
							
								
								
									
										244
									
								
								Grid/algorithms/iterative/GeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										244
									
								
								Grid/algorithms/iterative/GeneralisedMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,244 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/GeneralisedMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_GENERALISED_MINIMAL_RESIDUAL_H | ||||
| #define GRID_GENERALISED_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class Field> | ||||
| class GeneralisedMinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // Throw an assert when GMRES fails to converge, | ||||
|                           // defaults to true | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|  | ||||
|   Integer MaxIterations; | ||||
|   Integer RestartLength; | ||||
|   Integer MaxNumberOfRestarts; | ||||
|   Integer IterationCount; // Number of iterations the GMRES took to finish, | ||||
|                           // filled in upon completion | ||||
|  | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|   GridStopWatch QrTimer; | ||||
|   GridStopWatch CompSolutionTimer; | ||||
|  | ||||
|   Eigen::MatrixXcd H; | ||||
|  | ||||
|   std::vector<ComplexD> y; | ||||
|   std::vector<ComplexD> gamma; | ||||
|   std::vector<ComplexD> c; | ||||
|   std::vector<ComplexD> s; | ||||
|  | ||||
|   GeneralisedMinimalResidual(RealD   tol, | ||||
|                              Integer maxit, | ||||
|                              Integer restart_length, | ||||
|                              bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , RestartLength(restart_length) | ||||
|       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||
|       , ErrorOnNoConverge(err_on_no_conv) | ||||
|       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||
|       , y(RestartLength + 1, 0.) | ||||
|       , gamma(RestartLength + 1, 0.) | ||||
|       , c(RestartLength + 1, 0.) | ||||
|       , s(RestartLength + 1, 0.) {}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi) { | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "GeneralisedMinimalResidual: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "GeneralisedMinimalResidual:   src " << ssq   << std::endl; | ||||
|  | ||||
|     MatrixTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|     QrTimer.Reset(); | ||||
|     CompSolutionTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     IterationCount = 0; | ||||
|  | ||||
|     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||
|  | ||||
|       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|  | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         LinOp.Op(psi,r); | ||||
|         axpy(r,-1.0,src,r); | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "GeneralisedMinimalResidual: Converged on iteration " << IterationCount | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "GMRES Time elapsed: Total   " <<       SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "GMRES Time elapsed: Matrix  " <<       MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "GMRES Time elapsed: Linalg  " <<       LinalgTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "GMRES Time elapsed: QR      " <<           QrTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "GMRES Time elapsed: CompSol " << CompSolutionTimer.Elapsed() << std::endl; | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "GeneralisedMinimalResidual did NOT converge" << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD outerLoopBody(LinearOperatorBase<Field> &LinOp, const Field &src, Field &psi, RealD rsq) { | ||||
|  | ||||
|     RealD cp = 0; | ||||
|  | ||||
|     Field w(src.Grid()); | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     // this should probably be made a class member so that it is only allocated once, not in every restart | ||||
|     std::vector<Field> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(psi, w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r = src - w; | ||||
|  | ||||
|     gamma[0] = sqrt(norm2(r)); | ||||
|  | ||||
|     v[0] = (1. / gamma[0]) * r; | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for (int i=0; i<RestartLength; i++) { | ||||
|  | ||||
|       IterationCount++; | ||||
|  | ||||
|       arnoldiStep(LinOp, v, w, i); | ||||
|  | ||||
|       qrUpdate(i); | ||||
|  | ||||
|       cp = norm(gamma[i+1]); | ||||
|  | ||||
|       std::cout << GridLogIterative << "GeneralisedMinimalResidual: Iteration " << IterationCount | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||
|  | ||||
|         computeSolution(v, psi, i); | ||||
|  | ||||
|         return cp; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     assert(0); // Never reached | ||||
|     return cp; | ||||
|   } | ||||
|  | ||||
|   void arnoldiStep(LinearOperatorBase<Field> &LinOp, std::vector<Field> &v, Field &w, int iter) { | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(v[iter], w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     for (int i = 0; i <= iter; ++i) { | ||||
|       H(iter, i) = innerProduct(v[i], w); | ||||
|       w = w - ComplexD(H(iter, i)) * v[i]; | ||||
|     } | ||||
|  | ||||
|     H(iter, iter + 1) = sqrt(norm2(w)); | ||||
|     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||
|     LinalgTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void qrUpdate(int iter) { | ||||
|  | ||||
|     QrTimer.Start(); | ||||
|     for (int i = 0; i < iter ; ++i) { | ||||
|       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i + 1) = tmp; | ||||
|     } | ||||
|  | ||||
|     // Compute new Givens Rotation | ||||
|     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||
|     c[iter]     = H(iter, iter) / nu; | ||||
|     s[iter]     = H(iter, iter + 1) / nu; | ||||
|  | ||||
|     // Apply new Givens rotation | ||||
|     H(iter, iter)     = nu; | ||||
|     H(iter, iter + 1) = 0.; | ||||
|  | ||||
|     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||
|     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||
|     QrTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void computeSolution(std::vector<Field> const &v, Field &psi, int iter) { | ||||
|  | ||||
|     CompSolutionTimer.Start(); | ||||
|     for (int i = iter; i >= 0; i--) { | ||||
|       y[i] = gamma[i]; | ||||
|       for (int k = i + 1; k <= iter; k++) | ||||
|         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||
|       y[i] = y[i] / ComplexD(H(i, i)); | ||||
|     } | ||||
|  | ||||
|     for (int i = 0; i <= iter; i++) | ||||
|       psi = psi + v[i] * y[i]; | ||||
|     CompSolutionTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
| } | ||||
| #endif | ||||
							
								
								
									
										1412
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczos.h
									
									
									
									
									
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										1412
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczos.h
									
									
									
									
									
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										1220
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczosCoarse.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										1220
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedBlockLanczosCoarse.h
									
									
									
									
									
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										739
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h
									
									
									
									
									
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										739
									
								
								Grid/algorithms/iterative/ImplicitlyRestartedLanczos.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,739 @@ | ||||
|     /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/ImplicitlyRestartedLanczos.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Chulwoo Jung <chulwoo@bnl.gov> | ||||
| Author: Christoph Lehner <clehner@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #ifndef GRID_BIRL_H | ||||
| #define GRID_BIRL_H | ||||
|  | ||||
| #include <string.h> //memset | ||||
| //#include <zlib.h> | ||||
| #include <sys/stat.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Implicitly restarted lanczos | ||||
| ///////////////////////////////////////////////////////////// | ||||
| template<class Field> class ImplicitlyRestartedLanczosTester  | ||||
| { | ||||
|  public: | ||||
|   virtual int TestConvergence(int j,RealD resid,Field &evec, RealD &eval,RealD evalMaxApprox)=0; | ||||
|   virtual int ReconstructEval(int j,RealD resid,Field &evec, RealD &eval,RealD evalMaxApprox)=0; | ||||
| }; | ||||
|  | ||||
| enum IRLdiagonalisation {  | ||||
|   IRLdiagonaliseWithDSTEGR, | ||||
|   IRLdiagonaliseWithQR, | ||||
|   IRLdiagonaliseWithEigen | ||||
| }; | ||||
|  | ||||
| template<class Field> class ImplicitlyRestartedLanczosHermOpTester  : public ImplicitlyRestartedLanczosTester<Field> | ||||
| { | ||||
|  public: | ||||
|  | ||||
|   LinearFunction<Field>       &_HermOp; | ||||
|   ImplicitlyRestartedLanczosHermOpTester(LinearFunction<Field> &HermOp) : _HermOp(HermOp)  {  }; | ||||
|   int ReconstructEval(int j,RealD resid,Field &B, RealD &eval,RealD evalMaxApprox) | ||||
|   { | ||||
|     return TestConvergence(j,resid,B,eval,evalMaxApprox); | ||||
|   } | ||||
|   int TestConvergence(int j,RealD eresid,Field &B, RealD &eval,RealD evalMaxApprox) | ||||
|   { | ||||
|     Field v(B); | ||||
|     RealD eval_poly = eval; | ||||
|     // Apply operator | ||||
|     _HermOp(B,v); | ||||
|  | ||||
|     RealD vnum = real(innerProduct(B,v)); // HermOp. | ||||
|     RealD vden = norm2(B); | ||||
|     RealD vv0  = norm2(v); | ||||
|     eval   = vnum/vden; | ||||
|     v -= eval*B; | ||||
|  | ||||
|     RealD vv = norm2(v) / ::pow(evalMaxApprox,2.0); | ||||
|  | ||||
|     std::cout.precision(13); | ||||
|  | ||||
|     int conv=0; | ||||
|     if( (vv<eresid*eresid) ) conv = 1; | ||||
|  | ||||
|     std::cout<<GridLogIRL  << "[" << std::setw(3)<<j<<"] " | ||||
| 	     <<"eval = "<<std::setw(25)<< eval << " (" << eval_poly << ")" | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv | ||||
| 	     <<" target " << eresid*eresid << " conv " <<conv | ||||
| 	     <<std::endl; | ||||
|  | ||||
|     return conv; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Field>  | ||||
| class ImplicitlyRestartedLanczos { | ||||
|  private: | ||||
|   const RealD small = 1.0e-8; | ||||
|   int MaxIter; | ||||
|   int MinRestart; // Minimum number of restarts; only check for convergence after | ||||
|   int Nstop;   // Number of evecs checked for convergence | ||||
|   int Nk;      // Number of converged sought | ||||
|   //  int Np;      // Np -- Number of spare vecs in krylov space //  == Nm - Nk | ||||
|   int Nm;      // Nm -- total number of vectors | ||||
|   IRLdiagonalisation diagonalisation; | ||||
|   int orth_period; | ||||
|      | ||||
|   RealD OrthoTime; | ||||
|   RealD eresid, betastp; | ||||
|   //////////////////////////////// | ||||
|   // Embedded objects | ||||
|   //////////////////////////////// | ||||
|   LinearFunction<Field>       &_PolyOp; | ||||
|   LinearFunction<Field>       &_HermOp; | ||||
|   ImplicitlyRestartedLanczosTester<Field> &_Tester; | ||||
|   // Default tester provided (we need a ref to something in default case) | ||||
|   ImplicitlyRestartedLanczosHermOpTester<Field> SimpleTester; | ||||
|   ///////////////////////// | ||||
|   // Constructor | ||||
|   ///////////////////////// | ||||
|    | ||||
| public:        | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////// | ||||
|   // PAB: | ||||
|   ////////////////////////////////////////////////////////////////// | ||||
|   // Too many options  & knobs.  | ||||
|   // Eliminate: | ||||
|   //   orth_period | ||||
|   //   betastp | ||||
|   //   MinRestart | ||||
|   // | ||||
|   // Do we really need orth_period | ||||
|   // What is the theoretical basis & guarantees of betastp ? | ||||
|   // Nstop=Nk viable? | ||||
|   // MinRestart avoidable with new convergence test? | ||||
|   // Could cut to PolyOp, HermOp, Tester, Nk, Nm, resid, maxiter (+diagonalisation) | ||||
|   // HermOp could be eliminated if we dropped the Power method for max eval. | ||||
|   // -- also: The eval, eval2, eval2_copy stuff is still unnecessarily unclear | ||||
|   ////////////////////////////////////////////////////////////////// | ||||
|  ImplicitlyRestartedLanczos(LinearFunction<Field> & PolyOp, | ||||
| 			    LinearFunction<Field> & HermOp, | ||||
| 			    ImplicitlyRestartedLanczosTester<Field> & Tester, | ||||
| 			    int _Nstop, // sought vecs | ||||
| 			    int _Nk, // sought vecs | ||||
| 			    int _Nm, // spare vecs | ||||
| 			    RealD _eresid, // resid in lmdue deficit  | ||||
| 			    int _MaxIter, // Max iterations | ||||
| 			    RealD _betastp=0.0, // if beta(k) < betastp: converged | ||||
| 			    int _MinRestart=0, int _orth_period = 1, | ||||
| 			    IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | ||||
|     SimpleTester(HermOp), _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(Tester), | ||||
|     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), | ||||
|     eresid(_eresid),      betastp(_betastp), | ||||
|     MaxIter(_MaxIter)  ,      MinRestart(_MinRestart), | ||||
|     orth_period(_orth_period), diagonalisation(_diagonalisation)  { }; | ||||
|  | ||||
|     ImplicitlyRestartedLanczos(LinearFunction<Field> & PolyOp, | ||||
| 			       LinearFunction<Field> & HermOp, | ||||
| 			       int _Nstop, // sought vecs | ||||
| 			       int _Nk, // sought vecs | ||||
| 			       int _Nm, // spare vecs | ||||
| 			       RealD _eresid, // resid in lmdue deficit  | ||||
| 			       int _MaxIter, // Max iterations | ||||
| 			       RealD _betastp=0.0, // if beta(k) < betastp: converged | ||||
| 			       int _MinRestart=0, int _orth_period = 1, | ||||
| 			       IRLdiagonalisation _diagonalisation= IRLdiagonaliseWithEigen) : | ||||
|     SimpleTester(HermOp),  _PolyOp(PolyOp),      _HermOp(HermOp), _Tester(SimpleTester), | ||||
|     Nstop(_Nstop)  ,      Nk(_Nk),      Nm(_Nm), | ||||
|     eresid(_eresid),      betastp(_betastp), | ||||
|     MaxIter(_MaxIter)  ,      MinRestart(_MinRestart), | ||||
|     orth_period(_orth_period), diagonalisation(_diagonalisation)  { }; | ||||
|  | ||||
|   //////////////////////////////// | ||||
|   // Helpers | ||||
|   //////////////////////////////// | ||||
|   template<typename T>  static RealD normalise(T& v)  | ||||
|   { | ||||
|     RealD nn = norm2(v); | ||||
|     nn = std::sqrt(nn); | ||||
|     v = v * (1.0/nn); | ||||
|     return nn; | ||||
|   } | ||||
|  | ||||
|   void orthogonalize(Field& w, std::vector<Field>& evec,int k) | ||||
|   { | ||||
|     OrthoTime-=usecond()/1e6; | ||||
|     basisOrthogonalize(evec,w,k); | ||||
|     normalise(w); | ||||
|     OrthoTime+=usecond()/1e6; | ||||
|   } | ||||
|  | ||||
| /* Rudy Arthur's thesis pp.137 | ||||
| ------------------------ | ||||
| Require: M > K P = M − K † | ||||
| Compute the factorization AVM = VM HM + fM eM  | ||||
| repeat | ||||
|   Q=I | ||||
|   for i = 1,...,P do | ||||
|     QiRi =HM −θiI Q = QQi | ||||
|     H M = Q †i H M Q i | ||||
|   end for | ||||
|   βK =HM(K+1,K) σK =Q(M,K) | ||||
|   r=vK+1βK +rσK | ||||
|   VK =VM(1:M)Q(1:M,1:K) | ||||
|   HK =HM(1:K,1:K) | ||||
|   →AVK =VKHK +fKe†K † Extend to an M = K + P step factorization AVM = VMHM + fMeM | ||||
| until convergence | ||||
| */ | ||||
|   void calc(std::vector<RealD>& eval, std::vector<Field>& evec,  const Field& src, int& Nconv, bool reverse=false) | ||||
|   { | ||||
|     GridBase *grid = src.Grid(); | ||||
|     assert(grid == evec[0].Grid()); | ||||
|      | ||||
|     //    GridLogIRL.TimingMode(1); | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
|     std::cout << GridLogIRL <<" ImplicitlyRestartedLanczos::calc() starting iteration 0 /  "<< MaxIter<< std::endl; | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
|     std::cout << GridLogIRL <<" -- seek   Nk    = " << Nk    <<" vectors"<< std::endl; | ||||
|     std::cout << GridLogIRL <<" -- accept Nstop = " << Nstop <<" vectors"<< std::endl; | ||||
|     std::cout << GridLogIRL <<" -- total  Nm    = " << Nm    <<" vectors"<< std::endl; | ||||
|     std::cout << GridLogIRL <<" -- size of eval = " << eval.size() << std::endl; | ||||
|     std::cout << GridLogIRL <<" -- size of evec = " << evec.size() << std::endl; | ||||
|     if ( diagonalisation == IRLdiagonaliseWithDSTEGR ) { | ||||
|       std::cout << GridLogIRL << "Diagonalisation is DSTEGR "<<std::endl; | ||||
|     } else if ( diagonalisation == IRLdiagonaliseWithQR ) {  | ||||
|       std::cout << GridLogIRL << "Diagonalisation is QR "<<std::endl; | ||||
|     }  else if ( diagonalisation == IRLdiagonaliseWithEigen ) {  | ||||
|       std::cout << GridLogIRL << "Diagonalisation is Eigen "<<std::endl; | ||||
|     } | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
| 	 | ||||
|     assert(Nm <= evec.size() && Nm <= eval.size()); | ||||
|      | ||||
|     // quickly get an idea of the largest eigenvalue to more properly normalize the residuum | ||||
|     RealD evalMaxApprox = 0.0; | ||||
|     { | ||||
|       auto src_n = src; | ||||
|       auto tmp = src; | ||||
|       std::cout << GridLogIRL << " IRL source norm " << norm2(src) << std::endl; | ||||
|       const int _MAX_ITER_IRL_MEVAPP_ = 50; | ||||
|       for (int i=0;i<_MAX_ITER_IRL_MEVAPP_;i++) { | ||||
| 	normalise(src_n); | ||||
| 	_HermOp(src_n,tmp); | ||||
| 	//	std::cout << GridLogMessage<< tmp<<std::endl; exit(0); | ||||
| 	//	std::cout << GridLogIRL << " _HermOp " << norm2(tmp) << std::endl; | ||||
| 	RealD vnum = real(innerProduct(src_n,tmp)); // HermOp. | ||||
| 	RealD vden = norm2(src_n); | ||||
| 	RealD na = vnum/vden; | ||||
| 	if (fabs(evalMaxApprox/na - 1.0) < 0.0001) | ||||
| 	  i=_MAX_ITER_IRL_MEVAPP_; | ||||
| 	evalMaxApprox = na; | ||||
| 	std::cout << GridLogIRL << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | ||||
| 	src_n = tmp; | ||||
|       } | ||||
|     } | ||||
| 	 | ||||
|     std::vector<RealD> lme(Nm);   | ||||
|     std::vector<RealD> lme2(Nm); | ||||
|     std::vector<RealD> eval2(Nm); | ||||
|     std::vector<RealD> eval2_copy(Nm); | ||||
|     Eigen::MatrixXd Qt = Eigen::MatrixXd::Zero(Nm,Nm); | ||||
|  | ||||
|     Field f(grid); | ||||
|     Field v(grid); | ||||
|     int k1 = 1; | ||||
|     int k2 = Nk; | ||||
|     RealD beta_k; | ||||
|  | ||||
|     Nconv = 0; | ||||
|    | ||||
|     // Set initial vector | ||||
|     evec[0] = src; | ||||
|     normalise(evec[0]); | ||||
| 	 | ||||
|     // Initial Nk steps | ||||
|     OrthoTime=0.; | ||||
|     for(int k=0; k<Nk; ++k) step(eval,lme,evec,f,Nm,k); | ||||
|     std::cout<<GridLogIRL <<"Initial "<< Nk <<"steps done "<<std::endl; | ||||
|     std::cout<<GridLogIRL <<"Initial steps:OrthoTime "<<OrthoTime<< "seconds"<<std::endl; | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // Restarting loop begins | ||||
|     ////////////////////////////////// | ||||
|     int iter; | ||||
|     for(iter = 0; iter<MaxIter; ++iter){ | ||||
|        | ||||
|       OrthoTime=0.; | ||||
|  | ||||
|       std::cout<< GridLogMessage <<" **********************"<< std::endl; | ||||
|       std::cout<< GridLogMessage <<" Restart iteration = "<< iter << std::endl; | ||||
|       std::cout<< GridLogMessage <<" **********************"<< std::endl; | ||||
|  | ||||
|       std::cout<<GridLogIRL <<" running "<<Nm-Nk <<" steps: "<<std::endl; | ||||
|       for(int k=Nk; k<Nm; ++k) step(eval,lme,evec,f,Nm,k); | ||||
|       f *= lme[Nm-1]; | ||||
|  | ||||
|       std::cout<<GridLogIRL <<" "<<Nm-Nk <<" steps done "<<std::endl; | ||||
|       std::cout<<GridLogIRL <<"Initial steps:OrthoTime "<<OrthoTime<< "seconds"<<std::endl; | ||||
| 	   | ||||
|       ////////////////////////////////// | ||||
|       // getting eigenvalues | ||||
|       ////////////////////////////////// | ||||
|       for(int k=0; k<Nm; ++k){ | ||||
| 	eval2[k] = eval[k+k1-1]; | ||||
| 	lme2[k] = lme[k+k1-1]; | ||||
|       } | ||||
|       Qt = Eigen::MatrixXd::Identity(Nm,Nm); | ||||
|       diagonalize(eval2,lme2,Nm,Nm,Qt,grid); | ||||
|       std::cout<<GridLogIRL <<" diagonalized "<<std::endl; | ||||
|  | ||||
|       ////////////////////////////////// | ||||
|       // sorting | ||||
|       ////////////////////////////////// | ||||
|       eval2_copy = eval2; | ||||
|       std::partial_sort(eval2.begin(),eval2.begin()+Nm,eval2.end(),std::greater<RealD>()); | ||||
|       std::cout<<GridLogIRL <<" evals sorted "<<std::endl; | ||||
|       const int chunk=8; | ||||
|       for(int io=0; io<k2;io+=chunk){ | ||||
| 	std::cout<<GridLogIRL << "eval "<< std::setw(3) << io ; | ||||
| 	for(int ii=0;ii<chunk;ii++){ | ||||
| 	  if ( (io+ii)<k2 ) | ||||
| 	    std::cout<< " "<< std::setw(12)<< eval2[io+ii]; | ||||
| 	} | ||||
| 	std::cout << std::endl; | ||||
|       } | ||||
|  | ||||
|       ////////////////////////////////// | ||||
|       // Implicitly shifted QR transformations | ||||
|       ////////////////////////////////// | ||||
|       Qt = Eigen::MatrixXd::Identity(Nm,Nm); | ||||
|       for(int ip=k2; ip<Nm; ++ip){  | ||||
| 	QR_decomp(eval,lme,Nm,Nm,Qt,eval2[ip],k1,Nm); | ||||
|       } | ||||
|       std::cout<<GridLogIRL <<"QR decomposed "<<std::endl; | ||||
|  | ||||
|       assert(k2<Nm);      assert(k2<Nm);      assert(k1>0); | ||||
|  | ||||
|       basisRotate(evec,Qt,k1-1,k2+1,0,Nm,Nm); /// big constraint on the basis | ||||
|       std::cout<<GridLogIRL <<"basisRotated  by Qt *"<<k1-1<<","<<k2+1<<")"<<std::endl; | ||||
|        | ||||
|       //////////////////////////////////////////////////// | ||||
|       // Compressed vector f and beta(k2) | ||||
|       //////////////////////////////////////////////////// | ||||
|       f *= Qt(k2-1,Nm-1); | ||||
|       f += lme[k2-1] * evec[k2]; | ||||
|       beta_k = norm2(f); | ||||
|       beta_k = std::sqrt(beta_k); | ||||
|       std::cout<<GridLogIRL<<" beta(k) = "<<beta_k<<std::endl; | ||||
| 	   | ||||
|       RealD betar = 1.0/beta_k; | ||||
|       evec[k2] = betar * f; | ||||
|       lme[k2-1] = beta_k; | ||||
| 	   | ||||
|       //////////////////////////////////////////////////// | ||||
|       // Convergence test | ||||
|       //////////////////////////////////////////////////// | ||||
|       for(int k=0; k<Nm; ++k){     | ||||
| 	eval2[k] = eval[k]; | ||||
| 	lme2[k] = lme[k]; | ||||
|       } | ||||
|       Qt = Eigen::MatrixXd::Identity(Nm,Nm); | ||||
|       diagonalize(eval2,lme2,Nk,Nm,Qt,grid); | ||||
|       std::cout<<GridLogIRL <<" Diagonalized "<<std::endl; | ||||
| 	   | ||||
|       Nconv = 0; | ||||
|       if (iter >= MinRestart) { | ||||
|  | ||||
| 	std::cout << GridLogIRL << "Test convergence: rotate subset of vectors to test convergence " << std::endl; | ||||
|  | ||||
| 	Field B(grid); B.Checkerboard() = evec[0].Checkerboard(); | ||||
|  | ||||
| 	//  power of two search pattern;  not every evalue in eval2 is assessed. | ||||
| 	int allconv =1; | ||||
| 	for(int jj = 1; jj<=Nstop; jj*=2){ | ||||
| 	  int j = Nstop-jj; | ||||
| 	  RealD e = eval2_copy[j]; // Discard the evalue | ||||
| 	  basisRotateJ(B,evec,Qt,j,0,Nk,Nm);	     | ||||
| 	  if( !_Tester.TestConvergence(j,eresid,B,e,evalMaxApprox) ) { | ||||
| 	    allconv=0; | ||||
| 	  } | ||||
| 	} | ||||
| 	// Do evec[0] for good measure | ||||
| 	{  | ||||
| 	  int j=0; | ||||
| 	  RealD e = eval2_copy[0];  | ||||
| 	  basisRotateJ(B,evec,Qt,j,0,Nk,Nm);	     | ||||
| 	  if( !_Tester.TestConvergence(j,eresid,B,e,evalMaxApprox) ) allconv=0; | ||||
| 	} | ||||
| 	if ( allconv ) Nconv = Nstop; | ||||
|  | ||||
| 	// test if we converged, if so, terminate | ||||
| 	std::cout<<GridLogIRL<<" #modes converged: >= "<<Nconv<<"/"<<Nstop<<std::endl; | ||||
| 	//	if( Nconv>=Nstop || beta_k < betastp){ | ||||
| 	if( Nconv>=Nstop){ | ||||
| 	  goto converged; | ||||
| 	} | ||||
| 	   | ||||
|       } else { | ||||
| 	std::cout << GridLogIRL << "iter < MinRestart: do not yet test for convergence\n"; | ||||
|       } // end of iter loop | ||||
|     } | ||||
|  | ||||
|     std::cout<<GridLogError<<"\n NOT converged.\n"; | ||||
|     abort(); | ||||
| 	 | ||||
|   converged: | ||||
|     { | ||||
|       Field B(grid); B.Checkerboard() = evec[0].Checkerboard(); | ||||
|       basisRotate(evec,Qt,0,Nk,0,Nk,Nm);	     | ||||
|       std::cout << GridLogIRL << " Rotated basis"<<std::endl; | ||||
|       Nconv=0; | ||||
|       ////////////////////////////////////////////////////////////////////// | ||||
|       // Full final convergence test; unconditionally applied | ||||
|       ////////////////////////////////////////////////////////////////////// | ||||
|       for(int j = 0; j<=Nk; j++){ | ||||
| 	B=evec[j]; | ||||
| 	if( _Tester.ReconstructEval(j,eresid,B,eval2[j],evalMaxApprox) ) { | ||||
| 	  Nconv++; | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if ( Nconv < Nstop ) { | ||||
| 	std::cout << GridLogIRL << "Nconv ("<<Nconv<<") < Nstop ("<<Nstop<<")"<<std::endl; | ||||
| 	std::cout << GridLogIRL << "returning Nstop vectors, the last "<< Nstop-Nconv << "of which might meet convergence criterion only approximately" <<std::endl; | ||||
|       } | ||||
|       eval=eval2; | ||||
|        | ||||
|       //Keep only converged | ||||
|       eval.resize(Nstop);// was Nconv | ||||
|       evec.resize(Nstop,grid);// was Nconv | ||||
|       basisSortInPlace(evec,eval,reverse); | ||||
|        | ||||
|     } | ||||
|         | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
|     std::cout << GridLogIRL << "ImplicitlyRestartedLanczos CONVERGED ; Summary :\n"; | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
|     std::cout << GridLogIRL << " -- Iterations  = "<< iter   << "\n"; | ||||
|     std::cout << GridLogIRL << " -- beta(k)     = "<< beta_k << "\n"; | ||||
|     std::cout << GridLogIRL << " -- Nconv       = "<< Nconv  << "\n"; | ||||
|     std::cout << GridLogIRL <<"**************************************************************************"<< std::endl; | ||||
|   } | ||||
|  | ||||
|  private: | ||||
| /* Saad PP. 195 | ||||
| 1. Choose an initial vector v1 of 2-norm unity. Set β1 ≡ 0, v0 ≡ 0 | ||||
| 2. For k = 1,2,...,m Do: | ||||
| 3. wk:=Avk - b_k v_{k-1}       | ||||
| 4. ak:=(wk,vk)       //  | ||||
| 5. wk:=wk-akvk       // wk orthog vk  | ||||
| 6. bk+1 := ||wk||_2. If b_k+1 = 0 then Stop | ||||
| 7. vk+1 := wk/b_k+1 | ||||
| 8. EndDo | ||||
|  */ | ||||
|   void step(std::vector<RealD>& lmd, | ||||
| 	    std::vector<RealD>& lme,  | ||||
| 	    std::vector<Field>& evec, | ||||
| 	    Field& w,int Nm,int k) | ||||
|   { | ||||
|     std::cout<<GridLogDebug << "Lanczos step " <<k<<std::endl; | ||||
|     const RealD tiny = 1.0e-20; | ||||
|     assert( k< Nm ); | ||||
|  | ||||
|     GridStopWatch gsw_op,gsw_o; | ||||
|  | ||||
|     Field& evec_k = evec[k]; | ||||
|  | ||||
|     _PolyOp(evec_k,w);    std::cout<<GridLogDebug << "PolyOp" <<std::endl; | ||||
|  | ||||
|     if(k>0) w -= lme[k-1] * evec[k-1]; | ||||
|  | ||||
|     ComplexD zalph = innerProduct(evec_k,w); | ||||
|     RealD     alph = real(zalph); | ||||
|  | ||||
|     w = w - alph * evec_k; | ||||
|  | ||||
|     RealD beta = normalise(w);  | ||||
|  | ||||
|     lmd[k] = alph; | ||||
|     lme[k] = beta; | ||||
|  | ||||
|     if ( (k>0) && ( (k % orth_period) == 0 )) { | ||||
|       std::cout<<GridLogDebug << "Orthogonalising " <<k<<std::endl; | ||||
|       orthogonalize(w,evec,k); // orthonormalise | ||||
|       std::cout<<GridLogDebug << "Orthogonalised " <<k<<std::endl; | ||||
|     } | ||||
|  | ||||
|     if(k < Nm-1) evec[k+1] = w; | ||||
|  | ||||
|     std::cout<<GridLogIRL << "Lanczos step alpha[" << k << "] = " << zalph << " beta[" << k << "] = "<<beta<<std::endl; | ||||
|     if ( beta < tiny )  | ||||
|       std::cout<<GridLogIRL << " beta is tiny "<<beta<<std::endl; | ||||
|  | ||||
|     std::cout<<GridLogDebug << "Lanczos step complete " <<k<<std::endl; | ||||
|   } | ||||
|  | ||||
|   void diagonalize_Eigen(std::vector<RealD>& lmd, std::vector<RealD>& lme,  | ||||
| 			 int Nk, int Nm,   | ||||
| 			 Eigen::MatrixXd & Qt, // Nm x Nm | ||||
| 			 GridBase *grid) | ||||
|   { | ||||
|     Eigen::MatrixXd TriDiag = Eigen::MatrixXd::Zero(Nk,Nk); | ||||
|  | ||||
|     for(int i=0;i<Nk;i++)   TriDiag(i,i)   = lmd[i]; | ||||
|     for(int i=0;i<Nk-1;i++) TriDiag(i,i+1) = lme[i]; | ||||
|     for(int i=0;i<Nk-1;i++) TriDiag(i+1,i) = lme[i]; | ||||
|      | ||||
|     Eigen::SelfAdjointEigenSolver<Eigen::MatrixXd> eigensolver(TriDiag); | ||||
|  | ||||
|     for (int i = 0; i < Nk; i++) { | ||||
|       lmd[Nk-1-i] = eigensolver.eigenvalues()(i); | ||||
|     } | ||||
|     for (int i = 0; i < Nk; i++) { | ||||
|       for (int j = 0; j < Nk; j++) { | ||||
| 	Qt(Nk-1-i,j) = eigensolver.eigenvectors()(j,i); | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   // File could end here if settle on Eigen ??? !!! | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   void QR_decomp(std::vector<RealD>& lmd,   // Nm  | ||||
| 		 std::vector<RealD>& lme,   // Nm  | ||||
| 		 int Nk, int Nm,            // Nk, Nm | ||||
| 		 Eigen::MatrixXd& Qt,       // Nm x Nm matrix | ||||
| 		 RealD Dsh, int kmin, int kmax) | ||||
|   { | ||||
|     int k = kmin-1; | ||||
|     RealD x; | ||||
|      | ||||
|     RealD Fden = 1.0/hypot(lmd[k]-Dsh,lme[k]); | ||||
|     RealD c = ( lmd[k] -Dsh) *Fden; | ||||
|     RealD s = -lme[k] *Fden; | ||||
|        | ||||
|     RealD tmpa1 = lmd[k]; | ||||
|     RealD tmpa2 = lmd[k+1]; | ||||
|     RealD tmpb  = lme[k]; | ||||
|  | ||||
|     lmd[k]   = c*c*tmpa1 +s*s*tmpa2 -2.0*c*s*tmpb; | ||||
|     lmd[k+1] = s*s*tmpa1 +c*c*tmpa2 +2.0*c*s*tmpb; | ||||
|     lme[k]   = c*s*(tmpa1-tmpa2) +(c*c-s*s)*tmpb; | ||||
|     x        =-s*lme[k+1]; | ||||
|     lme[k+1] = c*lme[k+1]; | ||||
|        | ||||
|     for(int i=0; i<Nk; ++i){ | ||||
|       RealD Qtmp1 = Qt(k,i); | ||||
|       RealD Qtmp2 = Qt(k+1,i); | ||||
|       Qt(k,i)  = c*Qtmp1 - s*Qtmp2; | ||||
|       Qt(k+1,i)= s*Qtmp1 + c*Qtmp2;  | ||||
|     } | ||||
|  | ||||
|     // Givens transformations | ||||
|     for(int k = kmin; k < kmax-1; ++k){ | ||||
|        | ||||
|       RealD Fden = 1.0/hypot(x,lme[k-1]); | ||||
|       RealD c = lme[k-1]*Fden; | ||||
|       RealD s = - x*Fden; | ||||
| 	 | ||||
|       RealD tmpa1 = lmd[k]; | ||||
|       RealD tmpa2 = lmd[k+1]; | ||||
|       RealD tmpb  = lme[k]; | ||||
|  | ||||
|       lmd[k]   = c*c*tmpa1 +s*s*tmpa2 -2.0*c*s*tmpb; | ||||
|       lmd[k+1] = s*s*tmpa1 +c*c*tmpa2 +2.0*c*s*tmpb; | ||||
|       lme[k]   = c*s*(tmpa1-tmpa2) +(c*c-s*s)*tmpb; | ||||
|       lme[k-1] = c*lme[k-1] -s*x; | ||||
|  | ||||
|       if(k != kmax-2){ | ||||
| 	x = -s*lme[k+1]; | ||||
| 	lme[k+1] = c*lme[k+1]; | ||||
|       } | ||||
|  | ||||
|       for(int i=0; i<Nk; ++i){ | ||||
| 	RealD Qtmp1 = Qt(k,i); | ||||
| 	RealD Qtmp2 = Qt(k+1,i); | ||||
| 	Qt(k,i)     = c*Qtmp1 -s*Qtmp2; | ||||
| 	Qt(k+1,i)   = s*Qtmp1 +c*Qtmp2; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   void diagonalize(std::vector<RealD>& lmd, std::vector<RealD>& lme,  | ||||
| 		   int Nk, int Nm,    | ||||
| 		   Eigen::MatrixXd & Qt, | ||||
| 		   GridBase *grid) | ||||
|   { | ||||
|     Qt = Eigen::MatrixXd::Identity(Nm,Nm); | ||||
|     if ( diagonalisation == IRLdiagonaliseWithDSTEGR ) { | ||||
|       diagonalize_lapack(lmd,lme,Nk,Nm,Qt,grid); | ||||
|     } else if ( diagonalisation == IRLdiagonaliseWithQR ) {  | ||||
|       diagonalize_QR(lmd,lme,Nk,Nm,Qt,grid); | ||||
|     }  else if ( diagonalisation == IRLdiagonaliseWithEigen ) {  | ||||
|       diagonalize_Eigen(lmd,lme,Nk,Nm,Qt,grid); | ||||
|     } else {  | ||||
|       assert(0); | ||||
|     } | ||||
|   } | ||||
|  | ||||
| #ifdef USE_LAPACK | ||||
| void LAPACK_dstegr(char *jobz, char *range, int *n, double *d, double *e, | ||||
|                    double *vl, double *vu, int *il, int *iu, double *abstol, | ||||
|                    int *m, double *w, double *z, int *ldz, int *isuppz, | ||||
|                    double *work, int *lwork, int *iwork, int *liwork, | ||||
|                    int *info); | ||||
| #endif | ||||
|  | ||||
| void diagonalize_lapack(std::vector<RealD>& lmd, | ||||
| 			std::vector<RealD>& lme,  | ||||
| 			int Nk, int Nm,   | ||||
| 			Eigen::MatrixXd& Qt, | ||||
| 			GridBase *grid) | ||||
| { | ||||
| #ifdef USE_LAPACK | ||||
|   const int size = Nm; | ||||
|   int NN = Nk; | ||||
|   double evals_tmp[NN]; | ||||
|   double evec_tmp[NN][NN]; | ||||
|   memset(evec_tmp[0],0,sizeof(double)*NN*NN); | ||||
|   double DD[NN]; | ||||
|   double EE[NN]; | ||||
|   for (int i = 0; i< NN; i++) { | ||||
|     for (int j = i - 1; j <= i + 1; j++) { | ||||
|       if ( j < NN && j >= 0 ) { | ||||
| 	if (i==j) DD[i] = lmd[i]; | ||||
| 	if (i==j) evals_tmp[i] = lmd[i]; | ||||
| 	if (j==(i-1)) EE[j] = lme[j]; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   int evals_found; | ||||
|   int lwork = ( (18*NN) > (1+4*NN+NN*NN)? (18*NN):(1+4*NN+NN*NN)) ; | ||||
|   int liwork =  3+NN*10 ; | ||||
|   int iwork[liwork]; | ||||
|   double work[lwork]; | ||||
|   int isuppz[2*NN]; | ||||
|   char jobz = 'V'; // calculate evals & evecs | ||||
|   char range = 'I'; // calculate all evals | ||||
|   //    char range = 'A'; // calculate all evals | ||||
|   char uplo = 'U'; // refer to upper half of original matrix | ||||
|   char compz = 'I'; // Compute eigenvectors of tridiagonal matrix | ||||
|   int ifail[NN]; | ||||
|   int info; | ||||
|   int total = grid->_Nprocessors; | ||||
|   int node  = grid->_processor; | ||||
|   int interval = (NN/total)+1; | ||||
|   double vl = 0.0, vu = 0.0; | ||||
|   int il = interval*node+1 , iu = interval*(node+1); | ||||
|   if (iu > NN)  iu=NN; | ||||
|   double tol = 0.0; | ||||
|   if (1) { | ||||
|     memset(evals_tmp,0,sizeof(double)*NN); | ||||
|     if ( il <= NN){ | ||||
|       LAPACK_dstegr(&jobz, &range, &NN, | ||||
| 		    (double*)DD, (double*)EE, | ||||
| 		    &vl, &vu, &il, &iu, // these four are ignored if second parameteris 'A' | ||||
| 		    &tol, // tolerance | ||||
| 		    &evals_found, evals_tmp, (double*)evec_tmp, &NN, | ||||
| 		    isuppz, | ||||
| 		    work, &lwork, iwork, &liwork, | ||||
| 		    &info); | ||||
|       for (int i = iu-1; i>= il-1; i--){ | ||||
| 	evals_tmp[i] = evals_tmp[i - (il-1)]; | ||||
| 	if (il>1) evals_tmp[i-(il-1)]=0.; | ||||
| 	for (int j = 0; j< NN; j++){ | ||||
| 	  evec_tmp[i][j] = evec_tmp[i - (il-1)][j]; | ||||
| 	  if (il>1) evec_tmp[i-(il-1)][j]=0.; | ||||
| 	} | ||||
|       } | ||||
|     } | ||||
|     { | ||||
|       grid->GlobalSumVector(evals_tmp,NN); | ||||
|       grid->GlobalSumVector((double*)evec_tmp,NN*NN); | ||||
|     } | ||||
|   }  | ||||
|   // Safer to sort instead of just reversing it,  | ||||
|   // but the document of the routine says evals are sorted in increasing order.  | ||||
|   // qr gives evals in decreasing order. | ||||
|   for(int i=0;i<NN;i++){ | ||||
|     lmd [NN-1-i]=evals_tmp[i]; | ||||
|     for(int j=0;j<NN;j++){ | ||||
|       Qt((NN-1-i),j)=evec_tmp[i][j]; | ||||
|     } | ||||
|   } | ||||
| #else  | ||||
|   assert(0); | ||||
| #endif | ||||
| } | ||||
|  | ||||
| void diagonalize_QR(std::vector<RealD>& lmd, std::vector<RealD>& lme,  | ||||
| 		    int Nk, int Nm,    | ||||
| 		    Eigen::MatrixXd & Qt, | ||||
| 		    GridBase *grid) | ||||
| { | ||||
|   int QRiter = 100*Nm; | ||||
|   int kmin = 1; | ||||
|   int kmax = Nk; | ||||
|    | ||||
|   // (this should be more sophisticated) | ||||
|   for(int iter=0; iter<QRiter; ++iter){ | ||||
|      | ||||
|     // determination of 2x2 leading submatrix | ||||
|     RealD dsub = lmd[kmax-1]-lmd[kmax-2]; | ||||
|     RealD dd = std::sqrt(dsub*dsub + 4.0*lme[kmax-2]*lme[kmax-2]); | ||||
|     RealD Dsh = 0.5*(lmd[kmax-2]+lmd[kmax-1] +dd*(dsub/fabs(dsub))); | ||||
|     // (Dsh: shift) | ||||
|      | ||||
|     // transformation | ||||
|     QR_decomp(lmd,lme,Nk,Nm,Qt,Dsh,kmin,kmax); // Nk, Nm | ||||
|      | ||||
|     // Convergence criterion (redef of kmin and kamx) | ||||
|     for(int j=kmax-1; j>= kmin; --j){ | ||||
|       RealD dds = fabs(lmd[j-1])+fabs(lmd[j]); | ||||
|       if(fabs(lme[j-1])+dds > dds){ | ||||
| 	kmax = j+1; | ||||
| 	goto continued; | ||||
|       } | ||||
|     } | ||||
|     QRiter = iter; | ||||
|     return; | ||||
|      | ||||
|   continued: | ||||
|     for(int j=0; j<kmax-1; ++j){ | ||||
|       RealD dds = fabs(lmd[j])+fabs(lmd[j+1]); | ||||
|       if(fabs(lme[j])+dds > dds){ | ||||
| 	kmin = j+1; | ||||
| 	break; | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   std::cout << GridLogError << "[QL method] Error - Too many iteration: "<<QRiter<<"\n"; | ||||
|   abort(); | ||||
| } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/iterative/LocalCoherenceLanczos.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										454
									
								
								Grid/algorithms/iterative/LocalCoherenceLanczos.h
									
									
									
									
									
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							| @@ -0,0 +1,454 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/LocalCoherenceLanczos.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Christoph Lehner <clehner@bnl.gov> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_LOCAL_COHERENCE_IRL_H | ||||
| #define GRID_LOCAL_COHERENCE_IRL_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
|  | ||||
| struct LanczosParams : Serializable { | ||||
| public: | ||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(LanczosParams, | ||||
| 				  ChebyParams, Cheby,/*Chebyshev*/ | ||||
| 				  int, Nstop,    /*Vecs in Lanczos must converge Nstop < Nk < Nm*/ | ||||
| 				  int, Nk,       /*Vecs in Lanczos seek converge*/ | ||||
| 				  int, Nm,       /*Total vecs in Lanczos include restart*/ | ||||
| 				  RealD, resid,  /*residual*/ | ||||
|  				  int, MaxIt,  | ||||
| 				  RealD, betastp,  /* ? */ | ||||
| 				  int, MinRes);    // Must restart | ||||
| }; | ||||
|  | ||||
| //This class is the input parameter class for some testing programs | ||||
| struct LocalCoherenceLanczosParams : Serializable { | ||||
| public: | ||||
|   GRID_SERIALIZABLE_CLASS_MEMBERS(LocalCoherenceLanczosParams, | ||||
| 				  bool, saveEvecs, | ||||
| 				  bool, doFine, | ||||
| 				  bool, doFineRead, | ||||
| 				  bool, doCoarse, | ||||
| 	       			  bool, doCoarseRead, | ||||
| 				  LanczosParams, FineParams, | ||||
| 				  LanczosParams, CoarseParams, | ||||
| 				  ChebyParams,   Smoother, | ||||
| 				  RealD        , coarse_relax_tol, | ||||
| 				  std::vector<int>, blockSize, | ||||
| 				  std::string, config, | ||||
| 				  std::vector < ComplexD  >, omega, | ||||
| 				  RealD, mass, | ||||
| 				  RealD, M5); | ||||
| }; | ||||
|  | ||||
| // Duplicate functionality; ProjectedFunctionHermOp could be used with the trivial function | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class ProjectedHermOp : public LinearFunction<Lattice<iVector<CComplex,nbasis > > > { | ||||
| public: | ||||
|   using LinearFunction<Lattice<iVector<CComplex,nbasis > > >::operator(); | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<CComplex>   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj>          FineField; | ||||
|  | ||||
|   LinearOperatorBase<FineField> &_Linop; | ||||
|   std::vector<FineField>        &subspace; | ||||
|  | ||||
|   ProjectedHermOp(LinearOperatorBase<FineField>& linop, std::vector<FineField> & _subspace) :  | ||||
|     _Linop(linop), subspace(_subspace) | ||||
|   {   | ||||
|     assert(subspace.size() >0); | ||||
|   }; | ||||
|  | ||||
|   void operator()(const CoarseField& in, CoarseField& out) { | ||||
|     GridBase *FineGrid = subspace[0].Grid();     | ||||
|     int   checkerboard = subspace[0].Checkerboard(); | ||||
|  | ||||
|     FineField fin (FineGrid);     fin.Checkerboard()= checkerboard; | ||||
|     FineField fout(FineGrid);   fout.Checkerboard() = checkerboard; | ||||
|  | ||||
|     blockPromote(in,fin,subspace);       std::cout<<GridLogIRL<<"ProjectedHermop : Promote to fine"<<std::endl; | ||||
|     _Linop.HermOp(fin,fout);                   std::cout<<GridLogIRL<<"ProjectedHermop : HermOp (fine) "<<std::endl; | ||||
|     blockProject(out,fout,subspace);     std::cout<<GridLogIRL<<"ProjectedHermop : Project to coarse "<<std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class ProjectedFunctionHermOp : public LinearFunction<Lattice<iVector<CComplex,nbasis > > > { | ||||
| public: | ||||
|   using LinearFunction<Lattice<iVector<CComplex,nbasis > > >::operator(); | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<CComplex>   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj>          FineField; | ||||
|  | ||||
|  | ||||
|   OperatorFunction<FineField>   & _poly; | ||||
|   LinearOperatorBase<FineField> &_Linop; | ||||
|   std::vector<FineField>        &subspace; | ||||
|  | ||||
|   ProjectedFunctionHermOp(OperatorFunction<FineField> & poly, | ||||
| 			  LinearOperatorBase<FineField>& linop,  | ||||
| 			  std::vector<FineField> & _subspace) : | ||||
|     _poly(poly), | ||||
|     _Linop(linop), | ||||
|     subspace(_subspace) | ||||
|   {  }; | ||||
|  | ||||
|   void operator()(const CoarseField& in, CoarseField& out) { | ||||
|  | ||||
|     GridBase *FineGrid = subspace[0].Grid();     | ||||
|     int   checkerboard = subspace[0].Checkerboard(); | ||||
|  | ||||
|     FineField fin (FineGrid); fin.Checkerboard() =checkerboard; | ||||
|     FineField fout(FineGrid);fout.Checkerboard() =checkerboard; | ||||
|      | ||||
|     blockPromote(in,fin,subspace);             std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Promote to fine"<<std::endl; | ||||
|     _poly(_Linop,fin,fout);                    std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Poly "<<std::endl; | ||||
|     blockProject(out,fout,subspace);           std::cout<<GridLogIRL<<"ProjectedFunctionHermop : Project to coarse "<<std::endl; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class ImplicitlyRestartedLanczosSmoothedTester  : public ImplicitlyRestartedLanczosTester<Lattice<iVector<CComplex,nbasis > > > | ||||
| { | ||||
| public: | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<CComplex>   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj>          FineField; | ||||
|  | ||||
|   LinearFunction<CoarseField> & _Poly; | ||||
|   OperatorFunction<FineField>   & _smoother; | ||||
|   LinearOperatorBase<FineField> &_Linop; | ||||
|   RealD                             _coarse_relax_tol; | ||||
|   std::vector<FineField>        &_subspace; | ||||
|  | ||||
|   int _largestEvalIdxForReport; //The convergence of the LCL is based on the evals of the coarse grid operator, not those of the underlying fine grid operator | ||||
|                                 //As a result we do not know what the eval range of the fine operator is until the very end, making tuning the Cheby bounds very difficult | ||||
|                                 //To work around this issue, every restart we separately reconstruct the fine operator eval for the lowest and highest evec and print these | ||||
|                                 //out alongside the evals of the coarse operator. To do so we need to know the index of the largest eval (i.e. Nstop-1) | ||||
|                                 //NOTE: If largestEvalIdxForReport=-1 (default) then this is not performed | ||||
|    | ||||
|   ImplicitlyRestartedLanczosSmoothedTester(LinearFunction<CoarseField>   &Poly, | ||||
| 					   OperatorFunction<FineField>   &smoother, | ||||
| 					   LinearOperatorBase<FineField> &Linop, | ||||
| 					   std::vector<FineField>        &subspace, | ||||
| 					   RealD coarse_relax_tol=5.0e3, | ||||
| 					   int largestEvalIdxForReport=-1)  | ||||
|     : _smoother(smoother), _Linop(Linop), _Poly(Poly), _subspace(subspace), | ||||
|       _coarse_relax_tol(coarse_relax_tol), _largestEvalIdxForReport(largestEvalIdxForReport) | ||||
|   {    }; | ||||
|  | ||||
|   //evalMaxApprox: approximation of largest eval of the fine Chebyshev operator (suitably wrapped by block projection) | ||||
|   int TestConvergence(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox) | ||||
|   { | ||||
|     CoarseField v(B); | ||||
|     RealD eval_poly = eval; | ||||
|  | ||||
|     // Apply operator | ||||
|     _Poly(B,v); | ||||
|  | ||||
|     RealD vnum = real(innerProduct(B,v)); // HermOp. | ||||
|     RealD vden = norm2(B); | ||||
|     RealD vv0  = norm2(v); | ||||
|     eval   = vnum/vden; | ||||
|     v -= eval*B; | ||||
|  | ||||
|     RealD vv = norm2(v) / ::pow(evalMaxApprox,2.0); | ||||
|  | ||||
|     std::cout.precision(13); | ||||
|     std::cout<<GridLogIRL  << "[" << std::setw(3)<<j<<"] " | ||||
| 	     <<"eval = "<<std::setw(25)<< eval << " (" << eval_poly << ")" | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv | ||||
| 	     <<std::endl; | ||||
|  | ||||
|     if(_largestEvalIdxForReport != -1 && (j==0 || j==_largestEvalIdxForReport)){ | ||||
|       std::cout<<GridLogIRL << "Estimating true eval of fine grid operator for eval idx " << j << std::endl; | ||||
|       RealD tmp_eval; | ||||
|       ReconstructEval(j,eresid,B,tmp_eval,1.0); //don't use evalMaxApprox of coarse operator! (cf below) | ||||
|     } | ||||
|      | ||||
|     int conv=0; | ||||
|     if( (vv<eresid*eresid) ) conv = 1; | ||||
|     return conv; | ||||
|   } | ||||
|  | ||||
|   //This function is called at the end of the coarse grid Lanczos. It promotes the coarse eigenvector 'B' to the fine grid, | ||||
|   //applies a smoother to the result then computes the computes the *fine grid* eigenvalue (output as 'eval'). | ||||
|  | ||||
|   //evalMaxApprox should be the approximation of the largest eval of the fine Hermop. However when this function is called by IRL it actually passes the largest eval of the *Chebyshev* operator (as this is the max approx used for the TestConvergence above) | ||||
|   //As the largest eval of the Chebyshev is typically several orders of magnitude larger this makes the convergence test pass even when it should not. | ||||
|   //We therefore ignore evalMaxApprox here and use a value of 1.0 (note this value is already used by TestCoarse) | ||||
|   int ReconstructEval(int j,RealD eresid,CoarseField &B, RealD &eval,RealD evalMaxApprox)   | ||||
|   { | ||||
|     evalMaxApprox = 1.0; //cf above | ||||
|     GridBase *FineGrid = _subspace[0].Grid();     | ||||
|     int checkerboard   = _subspace[0].Checkerboard(); | ||||
|     FineField fB(FineGrid);fB.Checkerboard() =checkerboard; | ||||
|     FineField fv(FineGrid);fv.Checkerboard() =checkerboard; | ||||
|  | ||||
|     blockPromote(B,fv,_subspace);   | ||||
|      | ||||
|     _smoother(_Linop,fv,fB);  | ||||
|  | ||||
|     RealD eval_poly = eval; | ||||
|     _Linop.HermOp(fB,fv); | ||||
|  | ||||
|     RealD vnum = real(innerProduct(fB,fv)); // HermOp. | ||||
|     RealD vden = norm2(fB); | ||||
|     RealD vv0  = norm2(fv); | ||||
|     eval   = vnum/vden; | ||||
|     fv -= eval*fB; | ||||
|     RealD vv = norm2(fv) / ::pow(evalMaxApprox,2.0); | ||||
|     if ( j > nbasis ) eresid = eresid*_coarse_relax_tol; | ||||
|      | ||||
|     std::cout.precision(13); | ||||
|     std::cout<<GridLogIRL  << "[" << std::setw(3)<<j<<"] " | ||||
| 	     <<"eval = "<<std::setw(25)<< eval << " (" << eval_poly << ")" | ||||
| 	     <<" |H B[i] - eval[i]B[i]|^2 / evalMaxApprox^2 " << std::setw(25) << vv << " target " << eresid*eresid | ||||
| 	     <<std::endl; | ||||
|     if( (vv<eresid*eresid) ) return 1; | ||||
|     return 0; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////// | ||||
| // Make serializable Lanczos params | ||||
| //////////////////////////////////////////// | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class LocalCoherenceLanczos  | ||||
| { | ||||
| public: | ||||
|   typedef iVector<CComplex,nbasis >           CoarseSiteVector; | ||||
|   typedef Lattice<CComplex>                   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<CoarseSiteVector>           CoarseField; | ||||
|   typedef Lattice<Fobj>                       FineField; | ||||
|  | ||||
| protected: | ||||
|   GridBase *_CoarseGrid; | ||||
|   GridBase *_FineGrid; | ||||
|   int _checkerboard; | ||||
|   LinearOperatorBase<FineField>                 & _FineOp; | ||||
|    | ||||
|   std::vector<RealD>                              &evals_fine; | ||||
|   std::vector<RealD>                              &evals_coarse;  | ||||
|   std::vector<FineField>                          &subspace; | ||||
|   std::vector<CoarseField>                        &evec_coarse; | ||||
|  | ||||
| private: | ||||
|   std::vector<RealD>                              _evals_fine; | ||||
|   std::vector<RealD>                              _evals_coarse;  | ||||
|   std::vector<FineField>                          _subspace; | ||||
|   std::vector<CoarseField>                        _evec_coarse; | ||||
|  | ||||
| public: | ||||
|  | ||||
|   LocalCoherenceLanczos(GridBase *FineGrid, | ||||
| 			GridBase *CoarseGrid, | ||||
| 			LinearOperatorBase<FineField> &FineOp, | ||||
| 			int checkerboard) : | ||||
|     _CoarseGrid(CoarseGrid), | ||||
|     _FineGrid(FineGrid), | ||||
|     _FineOp(FineOp), | ||||
|     _checkerboard(checkerboard), | ||||
|     evals_fine  (_evals_fine), | ||||
|     evals_coarse(_evals_coarse), | ||||
|     subspace    (_subspace), | ||||
|     evec_coarse(_evec_coarse) | ||||
|   { | ||||
|     evals_fine.resize(0); | ||||
|     evals_coarse.resize(0); | ||||
|   }; | ||||
|   ////////////////////////////////////////////////////////////////////////// | ||||
|   // Alternate constructore, external storage for use by Hadrons module | ||||
|   ////////////////////////////////////////////////////////////////////////// | ||||
|   LocalCoherenceLanczos(GridBase *FineGrid, | ||||
| 			GridBase *CoarseGrid, | ||||
| 			LinearOperatorBase<FineField> &FineOp, | ||||
| 			int checkerboard, | ||||
| 			std::vector<FineField>   &ext_subspace, | ||||
| 			std::vector<CoarseField> &ext_coarse, | ||||
| 			std::vector<RealD>       &ext_eval_fine, | ||||
| 			std::vector<RealD>       &ext_eval_coarse | ||||
| 			) : | ||||
|     _CoarseGrid(CoarseGrid), | ||||
|     _FineGrid(FineGrid), | ||||
|     _FineOp(FineOp), | ||||
|     _checkerboard(checkerboard), | ||||
|     evals_fine  (ext_eval_fine),  | ||||
|     evals_coarse(ext_eval_coarse), | ||||
|     subspace    (ext_subspace), | ||||
|     evec_coarse (ext_coarse) | ||||
|   { | ||||
|     evals_fine.resize(0); | ||||
|     evals_coarse.resize(0); | ||||
|   }; | ||||
|  | ||||
|   //The block inner product is the inner product on the fine grid locally summed over the blocks | ||||
|   //to give a Lattice<Scalar> on the coarse grid. This function orthnormalizes the fine-grid subspace | ||||
|   //vectors under the block inner product. This step must be performed after computing the fine grid | ||||
|   //eigenvectors and before computing the coarse grid eigenvectors.     | ||||
|   void Orthogonalise(void ) { | ||||
|     CoarseScalar InnerProd(_CoarseGrid); | ||||
|     std::cout << GridLogMessage <<" Gramm-Schmidt pass 1"<<std::endl; | ||||
|     blockOrthogonalise(InnerProd,subspace); | ||||
|     std::cout << GridLogMessage <<" Gramm-Schmidt pass 2"<<std::endl; | ||||
|     blockOrthogonalise(InnerProd,subspace); | ||||
|   }; | ||||
|  | ||||
|   template<typename T>  static RealD normalise(T& v)  | ||||
|   { | ||||
|     RealD nn = norm2(v); | ||||
|     nn = ::sqrt(nn); | ||||
|     v = v * (1.0/nn); | ||||
|     return nn; | ||||
|   } | ||||
|   /* | ||||
|   void fakeFine(void) | ||||
|   { | ||||
|     int Nk = nbasis; | ||||
|     subspace.resize(Nk,_FineGrid); | ||||
|     subspace[0]=1.0; | ||||
|     subspace[0].Checkerboard()=_checkerboard; | ||||
|     normalise(subspace[0]); | ||||
|     PlainHermOp<FineField>    Op(_FineOp); | ||||
|     for(int k=1;k<Nk;k++){ | ||||
|       subspace[k].Checkerboard()=_checkerboard; | ||||
|       Op(subspace[k-1],subspace[k]); | ||||
|       normalise(subspace[k]); | ||||
|     } | ||||
|   } | ||||
|   */ | ||||
|  | ||||
|   void testFine(RealD resid)  | ||||
|   { | ||||
|     assert(evals_fine.size() == nbasis); | ||||
|     assert(subspace.size() == nbasis); | ||||
|     PlainHermOp<FineField>    Op(_FineOp); | ||||
|     ImplicitlyRestartedLanczosHermOpTester<FineField> SimpleTester(Op); | ||||
|     for(int k=0;k<nbasis;k++){ | ||||
|       assert(SimpleTester.ReconstructEval(k,resid,subspace[k],evals_fine[k],1.0)==1); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   //While this method serves to check the coarse eigenvectors, it also recomputes the eigenvalues from the smoothed reconstructed eigenvectors | ||||
|   //hence the smoother can be tuned after running the coarse Lanczos by using a different smoother here | ||||
|   void testCoarse(RealD resid,ChebyParams cheby_smooth,RealD relax)  | ||||
|   { | ||||
|     assert(evals_fine.size() == nbasis); | ||||
|     assert(subspace.size() == nbasis); | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // create a smoother and see if we can get a cheap convergence test and smooth inside the IRL | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     Chebyshev<FineField>                          ChebySmooth(cheby_smooth); | ||||
|     ProjectedFunctionHermOp<Fobj,CComplex,nbasis> ChebyOp (ChebySmooth,_FineOp,subspace); | ||||
|     ImplicitlyRestartedLanczosSmoothedTester<Fobj,CComplex,nbasis> ChebySmoothTester(ChebyOp,ChebySmooth,_FineOp,subspace,relax); | ||||
|  | ||||
|     for(int k=0;k<evec_coarse.size();k++){ | ||||
|       if ( k < nbasis ) {  | ||||
| 	assert(ChebySmoothTester.ReconstructEval(k,resid,evec_coarse[k],evals_coarse[k],1.0)==1); | ||||
|       } else {  | ||||
| 	assert(ChebySmoothTester.ReconstructEval(k,resid*relax,evec_coarse[k],evals_coarse[k],1.0)==1); | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   void calcFine(ChebyParams cheby_parms,int Nstop,int Nk,int Nm,RealD resid,  | ||||
| 		RealD MaxIt, RealD betastp, int MinRes) | ||||
|   { | ||||
|     assert(nbasis<=Nm); | ||||
|     Chebyshev<FineField>      Cheby(cheby_parms); | ||||
|     FunctionHermOp<FineField> ChebyOp(Cheby,_FineOp); | ||||
|     PlainHermOp<FineField>    Op(_FineOp); | ||||
|  | ||||
|     evals_fine.resize(Nm); | ||||
|     subspace.resize(Nm,_FineGrid); | ||||
|  | ||||
|     ImplicitlyRestartedLanczos<FineField> IRL(ChebyOp,Op,Nstop,Nk,Nm,resid,MaxIt,betastp,MinRes); | ||||
|  | ||||
|     FineField src(_FineGrid);  | ||||
|     typedef typename FineField::scalar_type Scalar; | ||||
|     // src=1.0;  | ||||
|     src=Scalar(1.0);  | ||||
|     src.Checkerboard() = _checkerboard; | ||||
|  | ||||
|     int Nconv; | ||||
|     IRL.calc(evals_fine,subspace,src,Nconv,false); | ||||
|      | ||||
|     // Shrink down to number saved | ||||
|     assert(Nstop>=nbasis); | ||||
|     assert(Nconv>=nbasis); | ||||
|     evals_fine.resize(nbasis); | ||||
|     subspace.resize(nbasis,_FineGrid); | ||||
|   } | ||||
|  | ||||
|  | ||||
|   //cheby_op: Parameters of the fine grid Chebyshev polynomial used for the Lanczos acceleration | ||||
|   //cheby_smooth: Parameters of a separate Chebyshev polynomial used after the Lanczos has completed to smooth out high frequency noise in the reconstructed fine grid eigenvectors prior to computing the eigenvalue | ||||
|   //relax: Reconstructed eigenvectors (post smoothing) are naturally not as precise as true eigenvectors. This factor acts as a multiplier on the stopping condition when determining whether the results satisfy the user provided stopping condition | ||||
|   void calcCoarse(ChebyParams cheby_op,ChebyParams cheby_smooth,RealD relax, | ||||
| 		  int Nstop, int Nk, int Nm,RealD resid,  | ||||
| 		  RealD MaxIt, RealD betastp, int MinRes) | ||||
|   { | ||||
|     Chebyshev<FineField>                          Cheby(cheby_op); //Chebyshev of fine operator on fine grid | ||||
|     ProjectedHermOp<Fobj,CComplex,nbasis>         Op(_FineOp,subspace); //Fine operator on coarse grid with intermediate fine grid conversion | ||||
|     ProjectedFunctionHermOp<Fobj,CComplex,nbasis> ChebyOp (Cheby,_FineOp,subspace); //Chebyshev of fine operator on coarse grid with intermediate fine grid conversion | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // create a smoother and see if we can get a cheap convergence test and smooth inside the IRL | ||||
|     ////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
|     Chebyshev<FineField>                                           ChebySmooth(cheby_smooth); //lower order Chebyshev of fine operator on fine grid used to smooth regenerated eigenvectors | ||||
|     ImplicitlyRestartedLanczosSmoothedTester<Fobj,CComplex,nbasis> ChebySmoothTester(ChebyOp,ChebySmooth,_FineOp,subspace,relax,Nstop-1);  | ||||
|  | ||||
|     evals_coarse.resize(Nm); | ||||
|     evec_coarse.resize(Nm,_CoarseGrid); | ||||
|  | ||||
|     CoarseField src(_CoarseGrid);     src=1.0;  | ||||
|  | ||||
|     //Note the "tester" here is also responsible for generating the fine grid eigenvalues which are output into the "evals_coarse" array | ||||
|     ImplicitlyRestartedLanczos<CoarseField> IRL(ChebyOp,ChebyOp,ChebySmoothTester,Nstop,Nk,Nm,resid,MaxIt,betastp,MinRes); | ||||
|     int Nconv=0; | ||||
|     IRL.calc(evals_coarse,evec_coarse,src,Nconv,false); | ||||
|     assert(Nconv>=Nstop); | ||||
|     evals_coarse.resize(Nstop); | ||||
|     evec_coarse.resize (Nstop,_CoarseGrid); | ||||
|     for (int i=0;i<Nstop;i++){ | ||||
|       std::cout << i << " Coarse eval = " << evals_coarse[i]  << std::endl; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   //Get the fine eigenvector 'i' by reconstruction | ||||
|   void getFineEvecEval(FineField &evec, RealD &eval, const int i) const{ | ||||
|     blockPromote(evec_coarse[i],evec,subspace);   | ||||
|     eval = evals_coarse[i]; | ||||
|   } | ||||
|      | ||||
|      | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										157
									
								
								Grid/algorithms/iterative/MinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										157
									
								
								Grid/algorithms/iterative/MinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,157 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/MinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_MINIMAL_RESIDUAL_H | ||||
| #define GRID_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class Field> class MinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // throw an assert when the MR fails to converge. | ||||
|                           // Defaults true. | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   RealD   overRelaxParam; | ||||
|   Integer IterationsToComplete; // Number of iterations the MR took to finish. | ||||
|                                 // Filled in upon completion | ||||
|  | ||||
|   MinimalResidual(RealD tol, Integer maxit, Real ovrelparam = 1.0, bool err_on_no_conv = true) | ||||
|     : Tolerance(tol), MaxIterations(maxit), overRelaxParam(ovrelparam), ErrorOnNoConverge(err_on_no_conv){}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<Field> &Linop, const Field &src, Field &psi) { | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     ComplexD a, c; | ||||
|     RealD    d; | ||||
|  | ||||
|     Field Mr(src); | ||||
|     Field r(src); | ||||
|  | ||||
|     // Initial residual computation & set up | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     Linop.Op(psi, Mr); | ||||
|  | ||||
|     r = src - Mr; | ||||
|  | ||||
|     RealD cp = norm2(r); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "MinimalResidual: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "MinimalResidual:   src " << ssq << std::endl; | ||||
|     std::cout << GridLogIterative << "MinimalResidual:  cp,r " << cp << std::endl; | ||||
|  | ||||
|     if (cp <= rsq) { | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogIterative << "MinimalResidual: k=0 residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|     GridStopWatch LinalgTimer; | ||||
|     GridStopWatch MatrixTimer; | ||||
|     GridStopWatch SolverTimer; | ||||
|  | ||||
|     SolverTimer.Start(); | ||||
|     int k; | ||||
|     for (k = 1; k <= MaxIterations; k++) { | ||||
|  | ||||
|       MatrixTimer.Start(); | ||||
|       Linop.Op(r, Mr); | ||||
|       MatrixTimer.Stop(); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       c = innerProduct(Mr, r); | ||||
|  | ||||
|       d = norm2(Mr); | ||||
|  | ||||
|       a = c / d; | ||||
|  | ||||
|       a = a * overRelaxParam; | ||||
|  | ||||
|       psi = psi + r * a; | ||||
|  | ||||
|       r = r - Mr * a; | ||||
|  | ||||
|       cp = norm2(r); | ||||
|  | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       std::cout << GridLogIterative << "MinimalResidual: Iteration " << k | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|       std::cout << GridLogDebug << "a = " << a << " c = " << c << " d = " << d << std::endl; | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         Linop.Op(psi, Mr); | ||||
|         r = src - Mr; | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "MinimalResidual Converged on iteration " << k | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "MR Time elapsed: Total   " << SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MR Time elapsed: Matrix  " << MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MR Time elapsed: Linalg  " << LinalgTimer.Elapsed() << std::endl; | ||||
|  | ||||
|         if (ErrorOnNoConverge) | ||||
|           assert(true_residual / Tolerance < 10000.0); | ||||
|  | ||||
|         IterationsToComplete = k; | ||||
|  | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "MinimalResidual did NOT converge" | ||||
|               << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|  | ||||
|     IterationsToComplete = k; | ||||
|   } | ||||
| }; | ||||
| } // namespace Grid | ||||
| #endif | ||||
| @@ -0,0 +1,276 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithms/iterative/MixedPrecisionFlexibleGeneralisedMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2015 | ||||
|  | ||||
| Author: Daniel Richtmann <daniel.richtmann@ur.de> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||
| #define GRID_MIXED_PRECISION_FLEXIBLE_GENERALISED_MINIMAL_RESIDUAL_H | ||||
|  | ||||
| namespace Grid { | ||||
|  | ||||
| template<class FieldD, class FieldF, typename std::enable_if<getPrecision<FieldD>::value == 2, int>::type = 0, typename std::enable_if< getPrecision<FieldF>::value == 1, int>::type = 0> | ||||
| class MixedPrecisionFlexibleGeneralisedMinimalResidual : public OperatorFunction<FieldD> { | ||||
|  public: | ||||
|  | ||||
|   using OperatorFunction<FieldD>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge; // Throw an assert when MPFGMRES fails to converge, | ||||
|                           // defaults to true | ||||
|  | ||||
|   RealD   Tolerance; | ||||
|  | ||||
|   Integer MaxIterations; | ||||
|   Integer RestartLength; | ||||
|   Integer MaxNumberOfRestarts; | ||||
|   Integer IterationCount; // Number of iterations the MPFGMRES took to finish, | ||||
|                           // filled in upon completion | ||||
|  | ||||
|   GridStopWatch MatrixTimer; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|   GridStopWatch QrTimer; | ||||
|   GridStopWatch CompSolutionTimer; | ||||
|   GridStopWatch ChangePrecTimer; | ||||
|  | ||||
|   Eigen::MatrixXcd H; | ||||
|  | ||||
|   std::vector<ComplexD> y; | ||||
|   std::vector<ComplexD> gamma; | ||||
|   std::vector<ComplexD> c; | ||||
|   std::vector<ComplexD> s; | ||||
|  | ||||
|   GridBase* SinglePrecGrid; | ||||
|  | ||||
|   LinearFunction<FieldF> &Preconditioner; | ||||
|  | ||||
|   MixedPrecisionFlexibleGeneralisedMinimalResidual(RealD   tol, | ||||
|                                                    Integer maxit, | ||||
|                                                    GridBase * sp_grid, | ||||
|                                                    LinearFunction<FieldF> &Prec, | ||||
|                                                    Integer restart_length, | ||||
|                                                    bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , RestartLength(restart_length) | ||||
|       , MaxNumberOfRestarts(MaxIterations/RestartLength + ((MaxIterations%RestartLength == 0) ? 0 : 1)) | ||||
|       , ErrorOnNoConverge(err_on_no_conv) | ||||
|       , H(Eigen::MatrixXcd::Zero(RestartLength, RestartLength + 1)) // sizes taken from DD-αAMG code base | ||||
|       , y(RestartLength + 1, 0.) | ||||
|       , gamma(RestartLength + 1, 0.) | ||||
|       , c(RestartLength + 1, 0.) | ||||
|       , s(RestartLength + 1, 0.) | ||||
|       , SinglePrecGrid(sp_grid) | ||||
|       , Preconditioner(Prec) {}; | ||||
|  | ||||
|   void operator()(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi) { | ||||
|  | ||||
|     psi.Checkerboard() = src.Checkerboard(); | ||||
|     conformable(psi, src); | ||||
|  | ||||
|     RealD guess = norm2(psi); | ||||
|     assert(std::isnan(guess) == 0); | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD ssq = norm2(src); | ||||
|     RealD rsq = Tolerance * Tolerance * ssq; | ||||
|  | ||||
|     FieldD r(src.Grid()); | ||||
|  | ||||
|     std::cout << std::setprecision(4) << std::scientific; | ||||
|     std::cout << GridLogIterative << "MPFGMRES: guess " << guess << std::endl; | ||||
|     std::cout << GridLogIterative << "MPFGMRES:   src " << ssq   << std::endl; | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatrixTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|     QrTimer.Reset(); | ||||
|     CompSolutionTimer.Reset(); | ||||
|     ChangePrecTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     IterationCount = 0; | ||||
|  | ||||
|     for (int k=0; k<MaxNumberOfRestarts; k++) { | ||||
|  | ||||
|       cp = outerLoopBody(LinOp, src, psi, rsq); | ||||
|  | ||||
|       // Stopping condition | ||||
|       if (cp <= rsq) { | ||||
|  | ||||
|         SolverTimer.Stop(); | ||||
|  | ||||
|         LinOp.Op(psi,r); | ||||
|         axpy(r,-1.0,src,r); | ||||
|  | ||||
|         RealD srcnorm       = sqrt(ssq); | ||||
|         RealD resnorm       = sqrt(norm2(r)); | ||||
|         RealD true_residual = resnorm / srcnorm; | ||||
|  | ||||
|         std::cout << GridLogMessage        << "MPFGMRES: Converged on iteration " << IterationCount | ||||
|                   << " computed residual " << sqrt(cp / ssq) | ||||
|                   << " true residual "     << true_residual | ||||
|                   << " target "            << Tolerance << std::endl; | ||||
|  | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Total      " <<       SolverTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Precon     " <<         PrecTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Matrix     " <<       MatrixTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: Linalg     " <<       LinalgTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: QR         " <<           QrTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: CompSol    " << CompSolutionTimer.Elapsed() << std::endl; | ||||
|         std::cout << GridLogMessage << "MPFGMRES Time elapsed: PrecChange " <<   ChangePrecTimer.Elapsed() << std::endl; | ||||
|         return; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     std::cout << GridLogMessage << "MPFGMRES did NOT converge" << std::endl; | ||||
|  | ||||
|     if (ErrorOnNoConverge) | ||||
|       assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD outerLoopBody(LinearOperatorBase<FieldD> &LinOp, const FieldD &src, FieldD &psi, RealD rsq) { | ||||
|  | ||||
|     RealD cp = 0; | ||||
|  | ||||
|     FieldD w(src.Grid()); | ||||
|     FieldD r(src.Grid()); | ||||
|  | ||||
|     // these should probably be made class members so that they are only allocated once, not in every restart | ||||
|     std::vector<FieldD> v(RestartLength + 1, src.Grid()); for (auto &elem : v) elem = Zero(); | ||||
|     std::vector<FieldD> z(RestartLength + 1, src.Grid()); for (auto &elem : z) elem = Zero(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(psi, w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r = src - w; | ||||
|  | ||||
|     gamma[0] = sqrt(norm2(r)); | ||||
|  | ||||
|     v[0] = (1. / gamma[0]) * r; | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for (int i=0; i<RestartLength; i++) { | ||||
|  | ||||
|       IterationCount++; | ||||
|  | ||||
|       arnoldiStep(LinOp, v, z, w, i); | ||||
|  | ||||
|       qrUpdate(i); | ||||
|  | ||||
|       cp = norm(gamma[i+1]); | ||||
|  | ||||
|       std::cout << GridLogIterative << "MPFGMRES: Iteration " << IterationCount | ||||
|                 << " residual " << cp << " target " << rsq << std::endl; | ||||
|  | ||||
|       if ((i == RestartLength - 1) || (IterationCount == MaxIterations) || (cp <= rsq)) { | ||||
|  | ||||
|         computeSolution(z, psi, i); | ||||
|  | ||||
|         return cp; | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     assert(0); // Never reached | ||||
|     return cp; | ||||
|   } | ||||
|  | ||||
|   void arnoldiStep(LinearOperatorBase<FieldD> &LinOp, std::vector<FieldD> &v, std::vector<FieldD> &z, FieldD &w, int iter) { | ||||
|  | ||||
|     FieldF v_f(SinglePrecGrid); | ||||
|     FieldF z_f(SinglePrecGrid); | ||||
|  | ||||
|     ChangePrecTimer.Start(); | ||||
|     precisionChange(v_f, v[iter]); | ||||
|     precisionChange(z_f, z[iter]); | ||||
|     ChangePrecTimer.Stop(); | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(v_f, z_f); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     ChangePrecTimer.Start(); | ||||
|     precisionChange(z[iter], z_f); | ||||
|     ChangePrecTimer.Stop(); | ||||
|  | ||||
|     MatrixTimer.Start(); | ||||
|     LinOp.Op(z[iter], w); | ||||
|     MatrixTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     for (int i = 0; i <= iter; ++i) { | ||||
|       H(iter, i) = innerProduct(v[i], w); | ||||
|       w = w - ComplexD(H(iter, i)) * v[i]; | ||||
|     } | ||||
|  | ||||
|     H(iter, iter + 1) = sqrt(norm2(w)); | ||||
|     v[iter + 1] = ComplexD(1. / H(iter, iter + 1)) * w; | ||||
|     LinalgTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void qrUpdate(int iter) { | ||||
|  | ||||
|     QrTimer.Start(); | ||||
|     for (int i = 0; i < iter ; ++i) { | ||||
|       auto tmp       = -s[i] * ComplexD(H(iter, i)) + c[i] * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i)     = conjugate(c[i]) * ComplexD(H(iter, i)) + conjugate(s[i]) * ComplexD(H(iter, i + 1)); | ||||
|       H(iter, i + 1) = tmp; | ||||
|     } | ||||
|  | ||||
|     // Compute new Givens Rotation | ||||
|     auto nu = sqrt(std::norm(H(iter, iter)) + std::norm(H(iter, iter + 1))); | ||||
|     c[iter]     = H(iter, iter) / nu; | ||||
|     s[iter]     = H(iter, iter + 1) / nu; | ||||
|  | ||||
|     // Apply new Givens rotation | ||||
|     H(iter, iter)     = nu; | ||||
|     H(iter, iter + 1) = 0.; | ||||
|  | ||||
|     gamma[iter + 1] = -s[iter] * gamma[iter]; | ||||
|     gamma[iter]     = conjugate(c[iter]) * gamma[iter]; | ||||
|     QrTimer.Stop(); | ||||
|   } | ||||
|  | ||||
|   void computeSolution(std::vector<FieldD> const &z, FieldD &psi, int iter) { | ||||
|  | ||||
|     CompSolutionTimer.Start(); | ||||
|     for (int i = iter; i >= 0; i--) { | ||||
|       y[i] = gamma[i]; | ||||
|       for (int k = i + 1; k <= iter; k++) | ||||
|         y[i] = y[i] - ComplexD(H(k, i)) * y[k]; | ||||
|       y[i] = y[i] / ComplexD(H(i, i)); | ||||
|     } | ||||
|  | ||||
|     for (int i = 0; i <= iter; i++) | ||||
|       psi = psi + z[i] * y[i]; | ||||
|     CompSolutionTimer.Stop(); | ||||
|   } | ||||
| }; | ||||
| } | ||||
| #endif | ||||
							
								
								
									
										138
									
								
								Grid/algorithms/iterative/NormalEquations.h
									
									
									
									
									
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										138
									
								
								Grid/algorithms/iterative/NormalEquations.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,138 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/NormalEquations.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_NORMAL_EQUATIONS_H | ||||
| #define GRID_NORMAL_EQUATIONS_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Take a matrix and form an NE solver calling a Herm solver | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<class Field> class NormalEquations : public LinearFunction<Field>{ | ||||
| private: | ||||
|   SparseMatrixBase<Field> & _Matrix; | ||||
|   OperatorFunction<Field> & _HermitianSolver; | ||||
|   LinearFunction<Field>   & _Guess; | ||||
| public: | ||||
|  | ||||
|   ///////////////////////////////////////////////////// | ||||
|   // Wrap the usual normal equations trick | ||||
|   ///////////////////////////////////////////////////// | ||||
|  NormalEquations(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver, | ||||
| 		 LinearFunction<Field> &Guess)  | ||||
|    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||
|  | ||||
|   void operator() (const Field &in, Field &out){ | ||||
|   | ||||
|     Field src(in.Grid()); | ||||
|     Field tmp(in.Grid()); | ||||
|  | ||||
|     MdagMLinearOperator<SparseMatrixBase<Field>,Field> MdagMOp(_Matrix); | ||||
|     _Matrix.Mdag(in,src); | ||||
|     _Guess(src,out); | ||||
|     _HermitianSolver(MdagMOp,src,out);  // Mdag M out = Mdag in | ||||
|  | ||||
|   }      | ||||
| }; | ||||
|  | ||||
| template<class Field> class NormalResidual : public LinearFunction<Field>{ | ||||
| private: | ||||
|   SparseMatrixBase<Field> & _Matrix; | ||||
|   OperatorFunction<Field> & _HermitianSolver; | ||||
|   LinearFunction<Field>   & _Guess; | ||||
| public: | ||||
|  | ||||
|   ///////////////////////////////////////////////////// | ||||
|   // Wrap the usual normal equations trick | ||||
|   ///////////////////////////////////////////////////// | ||||
|  NormalResidual(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver, | ||||
| 		 LinearFunction<Field> &Guess)  | ||||
|    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||
|  | ||||
|   void operator() (const Field &in, Field &out){ | ||||
|   | ||||
|     Field res(in.Grid()); | ||||
|     Field tmp(in.Grid()); | ||||
|  | ||||
|     MMdagLinearOperator<SparseMatrixBase<Field>,Field> MMdagOp(_Matrix); | ||||
|     _Guess(in,res); | ||||
|     _HermitianSolver(MMdagOp,in,res);  // M Mdag res = in ; | ||||
|     _Matrix.Mdag(res,out);             // out = Mdag res | ||||
|   }      | ||||
| }; | ||||
|  | ||||
| template<class Field> class HPDSolver : public LinearFunction<Field> { | ||||
| private: | ||||
|   LinearOperatorBase<Field> & _Matrix; | ||||
|   OperatorFunction<Field> & _HermitianSolver; | ||||
|   LinearFunction<Field>   & _Guess; | ||||
| public: | ||||
|  | ||||
|   ///////////////////////////////////////////////////// | ||||
|   // Wrap the usual normal equations trick | ||||
|   ///////////////////////////////////////////////////// | ||||
|  HPDSolver(LinearOperatorBase<Field> &Matrix, | ||||
| 	   OperatorFunction<Field> &HermitianSolver, | ||||
| 	   LinearFunction<Field> &Guess)  | ||||
|    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||
|  | ||||
|   void operator() (const Field &in, Field &out){ | ||||
|   | ||||
|     _Guess(in,out); | ||||
|     _HermitianSolver(_Matrix,in,out);  //M out = in | ||||
|  | ||||
|   }      | ||||
| }; | ||||
|  | ||||
|  | ||||
| template<class Field> class MdagMSolver : public LinearFunction<Field> { | ||||
| private: | ||||
|   SparseMatrixBase<Field> & _Matrix; | ||||
|   OperatorFunction<Field> & _HermitianSolver; | ||||
|   LinearFunction<Field>   & _Guess; | ||||
| public: | ||||
|  | ||||
|   ///////////////////////////////////////////////////// | ||||
|   // Wrap the usual normal equations trick | ||||
|   ///////////////////////////////////////////////////// | ||||
|  MdagMSolver(SparseMatrixBase<Field> &Matrix, OperatorFunction<Field> &HermitianSolver, | ||||
| 	     LinearFunction<Field> &Guess)  | ||||
|    :  _Matrix(Matrix), _HermitianSolver(HermitianSolver), _Guess(Guess) {};  | ||||
|  | ||||
|   void operator() (const Field &in, Field &out){ | ||||
|   | ||||
|     MdagMLinearOperator<SparseMatrixBase<Field>,Field> MdagMOp(_Matrix); | ||||
|     _Guess(in,out); | ||||
|  | ||||
|     _HermitianSolver(MdagMOp,in,out);  // Mdag M out = Mdag in | ||||
|  | ||||
|   }      | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										46
									
								
								Grid/algorithms/iterative/PowerMethod.h
									
									
									
									
									
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										46
									
								
								Grid/algorithms/iterative/PowerMethod.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,46 @@ | ||||
| #pragma once | ||||
| namespace Grid { | ||||
| template<class Field> class PowerMethod   | ||||
| {  | ||||
|  public:  | ||||
|  | ||||
|   template<typename T>  static RealD normalise(T& v)  | ||||
|   { | ||||
|     RealD nn = norm2(v); | ||||
|     nn = sqrt(nn); | ||||
|     v = v * (1.0/nn); | ||||
|     return nn; | ||||
|   } | ||||
|  | ||||
|   RealD operator()(LinearOperatorBase<Field> &HermOp, const Field &src)  | ||||
|   {  | ||||
|     GridBase *grid = src.Grid();  | ||||
|      | ||||
|     // quickly get an idea of the largest eigenvalue to more properly normalize the residuum  | ||||
|     RealD evalMaxApprox = 0.0;  | ||||
|     auto src_n = src;  | ||||
|     auto tmp = src;  | ||||
|     const int _MAX_ITER_EST_ = 200;  | ||||
|  | ||||
|     for (int i=0;i<_MAX_ITER_EST_;i++) {  | ||||
|        | ||||
|       normalise(src_n);  | ||||
|       HermOp.HermOp(src_n,tmp);  | ||||
|       RealD vnum = real(innerProduct(src_n,tmp)); // HermOp.  | ||||
|       RealD vden = norm2(src_n);  | ||||
|       RealD na = vnum/vden;  | ||||
|  | ||||
|       std::cout << GridLogMessage << "PowerMethod: Current approximation of largest eigenvalue " << na << std::endl; | ||||
|        | ||||
|       //      if ( (fabs(evalMaxApprox/na - 1.0) < 0.0001) || (i==_MAX_ITER_EST_-1) ) {  | ||||
| 	// 	evalMaxApprox = na;  | ||||
| 	// 	return evalMaxApprox;  | ||||
|       //      }  | ||||
|       evalMaxApprox = na;  | ||||
|       src_n = tmp; | ||||
|     } | ||||
|     std::cout << GridLogMessage << " Approximation of largest eigenvalue: " << evalMaxApprox << std::endl; | ||||
|     return evalMaxApprox; | ||||
|   } | ||||
| }; | ||||
| } | ||||
							
								
								
									
										76
									
								
								Grid/algorithms/iterative/PowerSpectrum.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										76
									
								
								Grid/algorithms/iterative/PowerSpectrum.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,76 @@ | ||||
| #pragma once | ||||
| namespace Grid { | ||||
|  | ||||
| class Band | ||||
| { | ||||
|   RealD lo, hi; | ||||
| public: | ||||
|   Band(RealD _lo,RealD _hi) | ||||
|   { | ||||
|     lo=_lo; | ||||
|     hi=_hi; | ||||
|   } | ||||
|   RealD operator() (RealD x){ | ||||
|     if ( x>lo && x<hi ){ | ||||
|       return 1.0; | ||||
|     } else { | ||||
|       return 0.0; | ||||
|     } | ||||
|   } | ||||
| }; | ||||
|  | ||||
| class PowerSpectrum | ||||
| {  | ||||
|  public:  | ||||
|  | ||||
|   template<typename T>  static RealD normalise(T& v)  | ||||
|   { | ||||
|     RealD nn = norm2(v); | ||||
|     nn = sqrt(nn); | ||||
|     v = v * (1.0/nn); | ||||
|     return nn; | ||||
|   } | ||||
|  | ||||
|   std::vector<RealD> ranges; | ||||
|   std::vector<int> order; | ||||
|    | ||||
|   PowerSpectrum(  std::vector<RealD> &bins, std::vector<int> &_order ) : ranges(bins), order(_order)  { }; | ||||
|  | ||||
|   template<class Field> | ||||
|   RealD operator()(LinearOperatorBase<Field> &HermOp, const Field &src)  | ||||
|   {  | ||||
|     GridBase *grid = src.Grid();  | ||||
|     int N=ranges.size(); | ||||
|     RealD hi = ranges[N-1]; | ||||
|  | ||||
|     RealD lo_band = 0.0; | ||||
|     RealD hi_band; | ||||
|     RealD nn=norm2(src); | ||||
|     RealD ss=0.0; | ||||
|  | ||||
|     Field tmp = src; | ||||
|  | ||||
|     for(int b=0;b<N;b++){ | ||||
|       hi_band = ranges[b]; | ||||
|       Band Notch(lo_band,hi_band); | ||||
|        | ||||
|       Chebyshev<Field> polynomial; | ||||
|       polynomial.Init(0.0,hi,order[b],Notch); | ||||
|       polynomial.JacksonSmooth(); | ||||
|  | ||||
|       polynomial(HermOp,src,tmp) ; | ||||
|  | ||||
|       RealD p=norm2(tmp); | ||||
|       ss=ss+p; | ||||
|       std::cout << GridLogMessage << " PowerSpectrum Band["<<lo_band<<","<<hi_band<<"] power "<<norm2(tmp)/nn<<std::endl; | ||||
|        | ||||
|       lo_band=hi_band; | ||||
|     } | ||||
|     std::cout << GridLogMessage << " PowerSpectrum total power "<<ss/nn<<std::endl; | ||||
|     std::cout << GridLogMessage << " PowerSpectrum total power (unnormalised) "<<nn<<std::endl; | ||||
|  | ||||
|     return 0; | ||||
|   }; | ||||
| }; | ||||
|    | ||||
| } | ||||
							
								
								
									
										119
									
								
								Grid/algorithms/iterative/PrecConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										119
									
								
								Grid/algorithms/iterative/PrecConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,119 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/PrecConjugateResidual.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_PREC_CONJUGATE_RESIDUAL_H | ||||
| #define GRID_PREC_CONJUGATE_RESIDUAL_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ///////////////////////////////////////////////////////////// | ||||
| // Base classes for iterative processes based on operators | ||||
| // single input vec, single output vec. | ||||
| ///////////////////////////////////////////////////////////// | ||||
|  | ||||
| template<class Field>  | ||||
| class PrecConjugateResidual : public OperatorFunction<Field> { | ||||
| public:                                                 | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|   LinearFunction<Field> &Preconditioner; | ||||
|  | ||||
|   PrecConjugateResidual(RealD tol,Integer maxit,LinearFunction<Field> &Prec) : Tolerance(tol), MaxIterations(maxit),      Preconditioner(Prec) | ||||
|   {  | ||||
|     verbose=1; | ||||
|   }; | ||||
|  | ||||
|   void operator() (LinearOperatorBase<Field> &Linop,const Field &src, Field &psi){ | ||||
|  | ||||
|     RealD a, b, c, d; | ||||
|     RealD cp, ssq,rsq; | ||||
|        | ||||
|     RealD rAr, rAAr, rArp; | ||||
|     RealD pAp, pAAp; | ||||
|  | ||||
|     GridBase *grid = src.Grid(); | ||||
|     Field r(grid),  p(grid), Ap(grid), Ar(grid), z(grid); | ||||
|        | ||||
|     psi=zero; | ||||
|     r  = src; | ||||
|     Preconditioner(r,p); | ||||
|  | ||||
|        | ||||
|  | ||||
|     Linop.HermOpAndNorm(p,Ap,pAp,pAAp); | ||||
|     Ar=Ap; | ||||
|     rAr=pAp; | ||||
|     rAAr=pAAp; | ||||
|  | ||||
|     cp =norm2(r); | ||||
|     ssq=norm2(src); | ||||
|     rsq=Tolerance*Tolerance*ssq; | ||||
|  | ||||
|     if (verbose) std::cout<<GridLogMessage<<"PrecConjugateResidual: iteration " <<0<<" residual "<<cp<< " target"<< rsq<<std::endl; | ||||
|  | ||||
|     for(int k=0;k<MaxIterations;k++){ | ||||
|  | ||||
|  | ||||
|       Preconditioner(Ap,z); | ||||
|       RealD rq= real(innerProduct(Ap,z));  | ||||
|  | ||||
|       a = rAr/rq; | ||||
|  | ||||
|       axpy(psi,a,p,psi); | ||||
|       cp = axpy_norm(r,-a,z,r); | ||||
|  | ||||
|       rArp=rAr; | ||||
|  | ||||
|       Linop.HermOpAndNorm(r,Ar,rAr,rAAr); | ||||
|  | ||||
|       b   =rAr/rArp; | ||||
|   | ||||
|       axpy(p,b,p,r); | ||||
|       pAAp=axpy_norm(Ap,b,Ap,Ar); | ||||
| 	 | ||||
|       if(verbose) std::cout<<GridLogMessage<<"PrecConjugateResidual: iteration " <<k<<" residual "<<cp<< " target"<< rsq<<std::endl; | ||||
|  | ||||
|       if(cp<rsq) { | ||||
| 	Linop.HermOp(psi,Ap); | ||||
| 	axpy(r,-1.0,src,Ap); | ||||
| 	RealD true_resid = norm2(r)/ssq; | ||||
| 	std::cout<<GridLogMessage<<"PrecConjugateResidual: Converged on iteration " <<k | ||||
| 		 << " computed residual "<<sqrt(cp/ssq) | ||||
| 		 << " true residual "<<sqrt(true_resid) | ||||
| 		 << " target "       <<Tolerance <<std::endl; | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|  | ||||
|     std::cout<<GridLogMessage<<"PrecConjugateResidual did NOT converge"<<std::endl; | ||||
|     assert(0); | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										239
									
								
								Grid/algorithms/iterative/PrecGeneralisedConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										239
									
								
								Grid/algorithms/iterative/PrecGeneralisedConjugateResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,239 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_PREC_GCR_H | ||||
| #define GRID_PREC_GCR_H | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| //VPGCR Abe and Zhang, 2005. | ||||
| //INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING | ||||
| //Computing and Information Volume 2, Number 2, Pages 147-161 | ||||
| //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||
| //    but VPGCR was nicely written up in their paper | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||
|  | ||||
| template<class Field> | ||||
| class PrecGeneralisedConjugateResidual : public LinearFunction<Field> { | ||||
| public:                                                 | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|   int mmax; | ||||
|   int nstep; | ||||
|   int steps; | ||||
|   int level; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch MatTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|  | ||||
|   LinearFunction<Field>     &Preconditioner; | ||||
|   LinearOperatorBase<Field> &Linop; | ||||
|  | ||||
|   void Level(int lv) { level=lv; }; | ||||
|  | ||||
|   PrecGeneralisedConjugateResidual(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||
|     Tolerance(tol),  | ||||
|     MaxIterations(maxit), | ||||
|     Linop(_Linop), | ||||
|     Preconditioner(Prec), | ||||
|     mmax(_mmax), | ||||
|     nstep(_nstep) | ||||
|   {  | ||||
|     level=1; | ||||
|     verbose=1; | ||||
|   }; | ||||
|  | ||||
|   void operator() (const Field &src, Field &psi){ | ||||
|  | ||||
|     psi=Zero(); | ||||
|     RealD cp, ssq,rsq; | ||||
|     ssq=norm2(src); | ||||
|     rsq=Tolerance*Tolerance*ssq; | ||||
|        | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     steps=0; | ||||
|     for(int k=0;k<MaxIterations;k++){ | ||||
|  | ||||
|       cp=GCRnStep(src,psi,rsq); | ||||
|  | ||||
|       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||
|  | ||||
|       if(cp<rsq) { | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	Linop.HermOp(psi,r); | ||||
| 	axpy(r,-1.0,src,r); | ||||
| 	RealD tr = norm2(r); | ||||
| 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||
| 		 << " computed residual "<<sqrt(cp/ssq) | ||||
| 		 << " true residual "    <<sqrt(tr/ssq) | ||||
| 		 << " target "           <<Tolerance <<std::endl; | ||||
|  | ||||
| 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||
| 	/* | ||||
| 	  GCRLogLevel<<"PGCR Time elapsed: Precon "<<   PrecTimer.Elapsed() <<std::endl; | ||||
| 	  GCRLogLevel<<"PGCR Time elapsed: Matrix "<<    MatTimer.Elapsed() <<std::endl; | ||||
| 	  GCRLogLevel<<"PGCR Time elapsed: Linalg "<< LinalgTimer.Elapsed() <<std::endl; | ||||
| 	*/ | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||
|     //    assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||
|  | ||||
|     RealD cp; | ||||
|     RealD a, b; | ||||
|     RealD zAz, zAAz; | ||||
|     RealD rq; | ||||
|  | ||||
|     GridBase *grid = src.Grid(); | ||||
|  | ||||
|     Field r(grid); | ||||
|     Field z(grid); | ||||
|     Field tmp(grid); | ||||
|     Field ttmp(grid); | ||||
|     Field Az(grid); | ||||
|  | ||||
|     //////////////////////////////// | ||||
|     // history for flexible orthog | ||||
|     //////////////////////////////// | ||||
|     std::vector<Field> q(mmax,grid); | ||||
|     std::vector<Field> p(mmax,grid); | ||||
|     std::vector<RealD> qq(mmax); | ||||
|        | ||||
|     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // initial guess x0 is taken as nonzero. | ||||
|     // r0=src-A x0 = src | ||||
|     ////////////////////////////////// | ||||
|     MatTimer.Start(); | ||||
|     Linop.HermOpAndNorm(psi,Az,zAz,zAAz);  | ||||
|     MatTimer.Stop(); | ||||
|      | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r=src-Az; | ||||
|     LinalgTimer.Stop(); | ||||
|     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||
|      | ||||
|     ///////////////////// | ||||
|     // p = Prec(r) | ||||
|     ///////////////////// | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(r,z); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     MatTimer.Start(); | ||||
|     Linop.HermOpAndNorm(z,Az,zAz,zAAz);  | ||||
|     MatTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|  | ||||
|     //p[0],q[0],qq[0]  | ||||
|     p[0]= z; | ||||
|     q[0]= Az; | ||||
|     qq[0]= zAAz; | ||||
|      | ||||
|     cp =norm2(r); | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for(int k=0;k<nstep;k++){ | ||||
|  | ||||
|       steps++; | ||||
|  | ||||
|       int kp     = k+1; | ||||
|       int peri_k = k %mmax; | ||||
|       int peri_kp= kp%mmax; | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|       rq= real(innerProduct(r,q[peri_k])); // what if rAr not real? | ||||
|       a = rq/qq[peri_k]; | ||||
|  | ||||
|       axpy(psi,a,p[peri_k],psi);          | ||||
|  | ||||
|       cp = axpy_norm(r,-a,q[peri_k],r); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||
|  | ||||
|       if((k==nstep-1)||(cp<rsq)){ | ||||
| 	return cp; | ||||
|       } | ||||
|  | ||||
|  | ||||
|       PrecTimer.Start(); | ||||
|       Preconditioner(r,z);// solve Az = r | ||||
|       PrecTimer.Stop(); | ||||
|  | ||||
|       MatTimer.Start(); | ||||
|       Linop.HermOpAndNorm(z,Az,zAz,zAAz); | ||||
|       MatTimer.Stop(); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       q[peri_kp]=Az; | ||||
|       p[peri_kp]=z; | ||||
|  | ||||
|       int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history. | ||||
|       for(int back=0;back<northog;back++){ | ||||
|  | ||||
| 	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0); | ||||
|  | ||||
| 	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back]; | ||||
| 	p[peri_kp]=p[peri_kp]+b*p[peri_back]; | ||||
| 	q[peri_kp]=q[peri_kp]+b*q[peri_back]; | ||||
|  | ||||
|       } | ||||
|       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||
|       LinalgTimer.Stop(); | ||||
|     } | ||||
|     assert(0); // never reached | ||||
|     return cp; | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -0,0 +1,242 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/PrecGeneralisedConjugateResidual.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_PREC_GCR_NON_HERM_H | ||||
| #define GRID_PREC_GCR_NON_HERM_H | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| //VPGCR Abe and Zhang, 2005. | ||||
| //INTERNATIONAL JOURNAL OF NUMERICAL ANALYSIS AND MODELING | ||||
| //Computing and Information Volume 2, Number 2, Pages 147-161 | ||||
| //NB. Likely not original reference since they are focussing on a preconditioner variant. | ||||
| //    but VPGCR was nicely written up in their paper | ||||
| /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define GCRLogLevel std::cout << GridLogMessage <<std::string(level,'\t')<< " Level "<<level<<" "  | ||||
|  | ||||
| template<class Field> | ||||
| class PrecGeneralisedConjugateResidualNonHermitian : public LinearFunction<Field> { | ||||
| public:                                                 | ||||
|   using LinearFunction<Field>::operator(); | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   int verbose; | ||||
|   int mmax; | ||||
|   int nstep; | ||||
|   int steps; | ||||
|   int level; | ||||
|   GridStopWatch PrecTimer; | ||||
|   GridStopWatch MatTimer; | ||||
|   GridStopWatch LinalgTimer; | ||||
|  | ||||
|   LinearFunction<Field>     &Preconditioner; | ||||
|   LinearOperatorBase<Field> &Linop; | ||||
|  | ||||
|   void Level(int lv) { level=lv; }; | ||||
|  | ||||
|   PrecGeneralisedConjugateResidualNonHermitian(RealD tol,Integer maxit,LinearOperatorBase<Field> &_Linop,LinearFunction<Field> &Prec,int _mmax,int _nstep) :  | ||||
|     Tolerance(tol),  | ||||
|     MaxIterations(maxit), | ||||
|     Linop(_Linop), | ||||
|     Preconditioner(Prec), | ||||
|     mmax(_mmax), | ||||
|     nstep(_nstep) | ||||
|   {  | ||||
|     level=1; | ||||
|     verbose=1; | ||||
|   }; | ||||
|  | ||||
|   void operator() (const Field &src, Field &psi){ | ||||
|  | ||||
|     psi=Zero(); | ||||
|     RealD cp, ssq,rsq; | ||||
|     ssq=norm2(src); | ||||
|     rsq=Tolerance*Tolerance*ssq; | ||||
|        | ||||
|     Field r(src.Grid()); | ||||
|  | ||||
|     PrecTimer.Reset(); | ||||
|     MatTimer.Reset(); | ||||
|     LinalgTimer.Reset(); | ||||
|  | ||||
|     GridStopWatch SolverTimer; | ||||
|     SolverTimer.Start(); | ||||
|  | ||||
|     steps=0; | ||||
|     for(int k=0;k<MaxIterations;k++){ | ||||
|  | ||||
|       cp=GCRnStep(src,psi,rsq); | ||||
|  | ||||
|       GCRLogLevel <<"PGCR("<<mmax<<","<<nstep<<") "<< steps <<" steps cp = "<<cp<<" target "<<rsq <<std::endl; | ||||
|  | ||||
|       if(cp<rsq) { | ||||
|  | ||||
| 	SolverTimer.Stop(); | ||||
|  | ||||
| 	Linop.Op(psi,r); | ||||
| 	axpy(r,-1.0,src,r); | ||||
| 	RealD tr = norm2(r); | ||||
| 	GCRLogLevel<<"PGCR: Converged on iteration " <<steps | ||||
| 		 << " computed residual "<<sqrt(cp/ssq) | ||||
| 		 << " true residual "    <<sqrt(tr/ssq) | ||||
| 		 << " target "           <<Tolerance <<std::endl; | ||||
|  | ||||
| 	GCRLogLevel<<"PGCR Time elapsed: Total  "<< SolverTimer.Elapsed() <<std::endl; | ||||
| 	return; | ||||
|       } | ||||
|  | ||||
|     } | ||||
|     GCRLogLevel<<"Variable Preconditioned GCR did not converge"<<std::endl; | ||||
|     //    assert(0); | ||||
|   } | ||||
|  | ||||
|   RealD GCRnStep(const Field &src, Field &psi,RealD rsq){ | ||||
|  | ||||
|     RealD cp; | ||||
|     ComplexD a, b; | ||||
|     //    ComplexD zAz; | ||||
|     RealD zAAz; | ||||
|     ComplexD rq; | ||||
|  | ||||
|     GridBase *grid = src.Grid(); | ||||
|  | ||||
|     Field r(grid); | ||||
|     Field z(grid); | ||||
|     Field tmp(grid); | ||||
|     Field ttmp(grid); | ||||
|     Field Az(grid); | ||||
|  | ||||
|     //////////////////////////////// | ||||
|     // history for flexible orthog | ||||
|     //////////////////////////////// | ||||
|     std::vector<Field> q(mmax,grid); | ||||
|     std::vector<Field> p(mmax,grid); | ||||
|     std::vector<RealD> qq(mmax); | ||||
|        | ||||
|     GCRLogLevel<< "PGCR nStep("<<nstep<<")"<<std::endl; | ||||
|  | ||||
|     ////////////////////////////////// | ||||
|     // initial guess x0 is taken as nonzero. | ||||
|     // r0=src-A x0 = src | ||||
|     ////////////////////////////////// | ||||
|     MatTimer.Start(); | ||||
|     Linop.Op(psi,Az); | ||||
|     //    zAz = innerProduct(Az,psi); | ||||
|     zAAz= norm2(Az); | ||||
|     MatTimer.Stop(); | ||||
|      | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|     r=src-Az; | ||||
|     LinalgTimer.Stop(); | ||||
|     GCRLogLevel<< "PGCR true residual r = src - A psi   "<<norm2(r) <<std::endl; | ||||
|      | ||||
|     ///////////////////// | ||||
|     // p = Prec(r) | ||||
|     ///////////////////// | ||||
|  | ||||
|     PrecTimer.Start(); | ||||
|     Preconditioner(r,z); | ||||
|     PrecTimer.Stop(); | ||||
|  | ||||
|     MatTimer.Start(); | ||||
|     Linop.Op(z,Az); | ||||
|     MatTimer.Stop(); | ||||
|  | ||||
|     LinalgTimer.Start(); | ||||
|  | ||||
|     //    zAz = innerProduct(Az,psi); | ||||
|     zAAz= norm2(Az); | ||||
|  | ||||
|     //p[0],q[0],qq[0]  | ||||
|     p[0]= z; | ||||
|     q[0]= Az; | ||||
|     qq[0]= zAAz; | ||||
|      | ||||
|     cp =norm2(r); | ||||
|     LinalgTimer.Stop(); | ||||
|  | ||||
|     for(int k=0;k<nstep;k++){ | ||||
|  | ||||
|       steps++; | ||||
|  | ||||
|       int kp     = k+1; | ||||
|       int peri_k = k %mmax; | ||||
|       int peri_kp= kp%mmax; | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|       rq= innerProduct(q[peri_k],r); // what if rAr not real? | ||||
|       a = rq/qq[peri_k]; | ||||
|  | ||||
|       axpy(psi,a,p[peri_k],psi);          | ||||
|  | ||||
|       cp = axpy_norm(r,-a,q[peri_k],r); | ||||
|       LinalgTimer.Stop(); | ||||
|  | ||||
|       GCRLogLevel<< "PGCR step["<<steps<<"]  resid " << cp << " target " <<rsq<<std::endl;  | ||||
|  | ||||
|       if((k==nstep-1)||(cp<rsq)){ | ||||
| 	return cp; | ||||
|       } | ||||
|  | ||||
|  | ||||
|       PrecTimer.Start(); | ||||
|       Preconditioner(r,z);// solve Az = r | ||||
|       PrecTimer.Stop(); | ||||
|  | ||||
|       MatTimer.Start(); | ||||
|       Linop.Op(z,Az); | ||||
|       MatTimer.Stop(); | ||||
|       //      zAz = innerProduct(Az,psi); | ||||
|       zAAz= norm2(Az); | ||||
|  | ||||
|       LinalgTimer.Start(); | ||||
|  | ||||
|       q[peri_kp]=Az; | ||||
|       p[peri_kp]=z; | ||||
|  | ||||
|       int northog = ((kp)>(mmax-1))?(mmax-1):(kp);  // if more than mmax done, we orthog all mmax history. | ||||
|       for(int back=0;back<northog;back++){ | ||||
|  | ||||
| 	int peri_back=(k-back)%mmax;   	  assert((k-back)>=0); | ||||
|  | ||||
| 	b=-real(innerProduct(q[peri_back],Az))/qq[peri_back]; | ||||
| 	p[peri_kp]=p[peri_kp]+b*p[peri_back]; | ||||
| 	q[peri_kp]=q[peri_kp]+b*q[peri_back]; | ||||
|  | ||||
|       } | ||||
|       qq[peri_kp]=norm2(q[peri_kp]); // could use axpy_norm | ||||
|       LinalgTimer.Stop(); | ||||
|     } | ||||
|     assert(0); // never reached | ||||
|     return cp; | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										371
									
								
								Grid/algorithms/iterative/QuasiMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										371
									
								
								Grid/algorithms/iterative/QuasiMinimalResidual.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,371 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
| Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
| Source file: ./lib/algorithmsf/iterative/QuasiMinimalResidual.h | ||||
|  | ||||
| Copyright (C) 2019 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
| This program is free software; you can redistribute it and/or modify | ||||
| it under the terms of the GNU General Public License as published by | ||||
| the Free Software Foundation; either version 2 of the License, or | ||||
| (at your option) any later version. | ||||
|  | ||||
| This program is distributed in the hope that it will be useful, | ||||
| but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
| MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
| GNU General Public License for more details. | ||||
|  | ||||
| You should have received a copy of the GNU General Public License along | ||||
| with this program; if not, write to the Free Software Foundation, Inc., | ||||
| 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
| See the full license in the file "LICENSE" in the top level distribution | ||||
| directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class Field>  | ||||
| RealD innerG5ProductReal(Field &l, Field &r) | ||||
| { | ||||
|   Gamma G5(Gamma::Algebra::Gamma5); | ||||
|   Field tmp(l.Grid()); | ||||
|   //  tmp = G5*r; | ||||
|   G5R5(tmp,r); | ||||
|   ComplexD ip =innerProduct(l,tmp); | ||||
|   std::cout << "innerProductRealG5R5 "<<ip<<std::endl; | ||||
|   return ip.real(); | ||||
| } | ||||
|  | ||||
| template<class Field> | ||||
| class QuasiMinimalResidual : public OperatorFunction<Field> { | ||||
|  public: | ||||
|   using OperatorFunction<Field>::operator(); | ||||
|  | ||||
|   bool ErrorOnNoConverge;  | ||||
|   RealD   Tolerance; | ||||
|   Integer MaxIterations; | ||||
|   Integer IterationCount; | ||||
|  | ||||
|   QuasiMinimalResidual(RealD   tol, | ||||
| 		       Integer maxit, | ||||
| 		       bool    err_on_no_conv = true) | ||||
|       : Tolerance(tol) | ||||
|       , MaxIterations(maxit) | ||||
|       , ErrorOnNoConverge(err_on_no_conv)  | ||||
|   {}; | ||||
|  | ||||
| #if 1 | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &b, Field &x)  | ||||
|   { | ||||
|     RealD resid; | ||||
|     IterationCount=0; | ||||
|  | ||||
|     RealD  rho, rho_1, xi, gamma, gamma_1, theta, theta_1; | ||||
|     RealD  eta, delta, ep, beta;  | ||||
|  | ||||
|     GridBase *Grid = b.Grid(); | ||||
|     Field r(Grid), d(Grid), s(Grid); | ||||
|     Field v(Grid), w(Grid), y(Grid),  z(Grid); | ||||
|     Field v_tld(Grid), w_tld(Grid), y_tld(Grid), z_tld(Grid); | ||||
|     Field p(Grid), q(Grid), p_tld(Grid); | ||||
|  | ||||
|     Real normb = norm2(b); | ||||
|  | ||||
|     LinOp.Op(x,r); r = b - r; | ||||
|  | ||||
|     assert(normb> 0.0); | ||||
|  | ||||
|     resid = norm2(r)/normb; | ||||
|     if (resid <= Tolerance) { | ||||
|       return; | ||||
|     } | ||||
|  | ||||
|     v_tld = r; | ||||
|     y = v_tld; | ||||
|     rho = norm2(y); | ||||
|  | ||||
|     // Take Gamma5 conjugate | ||||
|     //    Gamma G5(Gamma::Algebra::Gamma5); | ||||
|     //    G5R5(w_tld,r); | ||||
|     //    w_tld = G5* v_tld; | ||||
|     w_tld=v_tld; | ||||
|     z = w_tld; | ||||
|     xi = norm2(z); | ||||
|  | ||||
|     gamma = 1.0; | ||||
|     eta   = -1.0; | ||||
|     theta = 0.0; | ||||
|  | ||||
|     for (int i = 1; i <= MaxIterations; i++) { | ||||
|  | ||||
|       // Breakdown tests | ||||
|       assert( rho != 0.0); | ||||
|       assert( xi  != 0.0); | ||||
|  | ||||
|       v = (1. / rho) * v_tld; | ||||
|       y = (1. / rho) * y; | ||||
|  | ||||
|       w = (1. / xi) * w_tld; | ||||
|       z = (1. / xi) * z; | ||||
|  | ||||
|       ComplexD Zdelta = innerProduct(z, y); // Complex? | ||||
|       std::cout << "Zdelta "<<Zdelta<<std::endl; | ||||
|       delta = Zdelta.real(); | ||||
|  | ||||
|       y_tld = y;  | ||||
|       z_tld = z; | ||||
|  | ||||
|       if (i > 1) { | ||||
| 	p = y_tld - (xi  * delta / ep) * p; | ||||
| 	q = z_tld - (rho * delta / ep) * q; | ||||
|       } else { | ||||
| 	p = y_tld; | ||||
| 	q = z_tld; | ||||
|       } | ||||
|  | ||||
|       LinOp.Op(p,p_tld);      //     p_tld = A * p; | ||||
|       ComplexD Zep = innerProduct(q, p_tld); | ||||
|       ep=Zep.real(); | ||||
|       std::cout << "Zep "<<Zep <<std::endl; | ||||
|       // Complex Audit | ||||
|       assert(abs(ep)>0); | ||||
|  | ||||
|       beta = ep / delta; | ||||
|       assert(abs(beta)>0); | ||||
|  | ||||
|       v_tld = p_tld - beta * v; | ||||
|       y = v_tld; | ||||
|  | ||||
|       rho_1 = rho; | ||||
|       rho   = norm2(y); | ||||
|       LinOp.AdjOp(q,w_tld); | ||||
|       w_tld = w_tld - beta * w; | ||||
|       z = w_tld; | ||||
|  | ||||
|       xi = norm2(z); | ||||
|  | ||||
|       gamma_1 = gamma; | ||||
|       theta_1 = theta; | ||||
|  | ||||
|       theta   = rho / (gamma_1 * beta); | ||||
|       gamma   = 1.0 / sqrt(1.0 + theta * theta); | ||||
|       std::cout << "theta "<<theta<<std::endl; | ||||
|       std::cout << "gamma "<<gamma<<std::endl; | ||||
|  | ||||
|       assert(abs(gamma)> 0.0); | ||||
|  | ||||
|       eta = -eta * rho_1 * gamma* gamma / (beta * gamma_1 * gamma_1); | ||||
|  | ||||
|       if (i > 1) { | ||||
| 	d = eta * p + (theta_1 * theta_1 * gamma * gamma) * d; | ||||
| 	s = eta * p_tld + (theta_1 * theta_1 * gamma * gamma) * s; | ||||
|       } else { | ||||
| 	d = eta * p; | ||||
| 	s = eta * p_tld; | ||||
|       } | ||||
|  | ||||
|       x =x+d;                            // update approximation vector | ||||
|       r =r-s;                            // compute residual | ||||
|  | ||||
|       if ((resid = norm2(r) / normb) <= Tolerance) { | ||||
| 	return; | ||||
|       } | ||||
|       std::cout << "Iteration "<<i<<" resid " << resid<<std::endl; | ||||
|     } | ||||
|     assert(0); | ||||
|     return;                            // no convergence | ||||
|   } | ||||
| #else | ||||
|   // QMRg5 SMP thesis | ||||
|   void operator()(LinearOperatorBase<Field> &LinOp, const Field &b, Field &x)  | ||||
|   { | ||||
|     // Real scalars | ||||
|     GridBase *grid = b.Grid(); | ||||
|  | ||||
|     Field    r(grid); | ||||
|     Field    p_m(grid), p_m_minus_1(grid), p_m_minus_2(grid); | ||||
|     Field    v_m(grid), v_m_minus_1(grid), v_m_plus_1(grid); | ||||
|     Field    tmp(grid); | ||||
|  | ||||
|     RealD    w; | ||||
|     RealD    z1, z2; | ||||
|     RealD    delta_m, delta_m_minus_1; | ||||
|     RealD    c_m_plus_1, c_m, c_m_minus_1; | ||||
|     RealD    s_m_plus_1, s_m, s_m_minus_1; | ||||
|     RealD    alpha, beta, gamma, epsilon; | ||||
|     RealD    mu, nu, rho, theta, xi, chi; | ||||
|     RealD    mod2r, mod2b; | ||||
|     RealD    tau2, target2; | ||||
|  | ||||
|     mod2b=norm2(b); | ||||
|  | ||||
|     ///////////////////////// | ||||
|     // Initial residual | ||||
|     ///////////////////////// | ||||
|     LinOp.Op(x,tmp); | ||||
|     r = b - tmp; | ||||
|  | ||||
|     ///////////////////////// | ||||
|     // \mu = \rho = |r_0| | ||||
|     ///////////////////////// | ||||
|     mod2r = norm2(r); | ||||
|     rho = sqrt( mod2r); | ||||
|     mu=rho; | ||||
|      | ||||
|     std::cout << "QuasiMinimalResidual rho "<< rho<<std::endl; | ||||
|     ///////////////////////// | ||||
|     // Zero negative history | ||||
|     ///////////////////////// | ||||
|     v_m_plus_1  = Zero(); | ||||
|     v_m_minus_1 = Zero(); | ||||
|     p_m_minus_1 = Zero(); | ||||
|     p_m_minus_2 = Zero(); | ||||
|  | ||||
|     // v0 | ||||
|     v_m = (1.0/rho)*r; | ||||
|  | ||||
|     ///////////////////////// | ||||
|     // Initial coeffs | ||||
|     ///////////////////////// | ||||
|     delta_m_minus_1 = 1.0; | ||||
|     c_m_minus_1     = 1.0; | ||||
|     c_m             = 1.0; | ||||
|     s_m_minus_1     = 0.0; | ||||
|     s_m             = 0.0; | ||||
|  | ||||
|     ///////////////////////// | ||||
|     // Set up convergence check | ||||
|     ///////////////////////// | ||||
|     tau2    = mod2r; | ||||
|     target2 = mod2b * Tolerance*Tolerance; | ||||
|   | ||||
|     for(int iter = 0 ; iter < MaxIterations; iter++){ | ||||
|  | ||||
|       ///////////////////////// | ||||
|       // \delta_m = (v_m, \gamma_5 v_m)  | ||||
|       ///////////////////////// | ||||
|       delta_m = innerG5ProductReal(v_m,v_m); | ||||
|       std::cout << "QuasiMinimalResidual delta_m "<< delta_m<<std::endl; | ||||
|  | ||||
|       ///////////////////////// | ||||
|       // tmp = A v_m | ||||
|       ///////////////////////// | ||||
|       LinOp.Op(v_m,tmp); | ||||
|  | ||||
|       ///////////////////////// | ||||
|       // \alpha = (v_m, \gamma_5 temp) / \delta_m  | ||||
|       ///////////////////////// | ||||
|       alpha = innerG5ProductReal(v_m,tmp); | ||||
|       alpha = alpha/delta_m ; | ||||
|       std::cout << "QuasiMinimalResidual alpha "<< alpha<<std::endl; | ||||
|  | ||||
|       ///////////////////////// | ||||
|       // \beta = \rho \delta_m / \delta_{m-1} | ||||
|       ///////////////////////// | ||||
|       beta = rho * delta_m / delta_m_minus_1; | ||||
|       std::cout << "QuasiMinimalResidual beta "<< beta<<std::endl; | ||||
|  | ||||
|       ///////////////////////// | ||||
|       // \tilde{v}_{m+1} = temp - \alpha v_m - \beta v_{m-1} | ||||
|       ///////////////////////// | ||||
|       v_m_plus_1 = tmp - alpha*v_m - beta*v_m_minus_1; | ||||
|  | ||||
|       /////////////////////////////// | ||||
|       // \rho = || \tilde{v}_{m+1} || | ||||
|       /////////////////////////////// | ||||
|       rho = sqrt( norm2(v_m_plus_1) ); | ||||
|       std::cout << "QuasiMinimalResidual rho "<< rho<<std::endl; | ||||
|  | ||||
|       /////////////////////////////// | ||||
|       //      v_{m+1} = \tilde{v}_{m+1} | ||||
|       /////////////////////////////// | ||||
|       v_m_plus_1 = (1.0 / rho) * v_m_plus_1; | ||||
|  | ||||
|       //////////////////////////////// | ||||
|       // QMR recurrence coefficients. | ||||
|       //////////////////////////////// | ||||
|       theta      = s_m_minus_1 * beta; | ||||
|       gamma      = c_m_minus_1 * beta; | ||||
|       epsilon    =  c_m * gamma + s_m * alpha; | ||||
|       xi         = -s_m * gamma + c_m * alpha; | ||||
|       nu         = sqrt( xi*xi + rho*rho ); | ||||
|       c_m_plus_1 = fabs(xi) / nu; | ||||
|       if ( xi == 0.0 ) { | ||||
| 	s_m_plus_1 = 1.0; | ||||
|       } else { | ||||
| 	s_m_plus_1 = c_m_plus_1 * rho / xi; | ||||
|       } | ||||
|       chi = c_m_plus_1 * xi + s_m_plus_1 * rho; | ||||
|  | ||||
|       std::cout << "QuasiMinimalResidual coeffs "<< theta <<" "<<gamma<<" "<< epsilon<<" "<< xi<<" "<< nu<<std::endl; | ||||
|       std::cout << "QuasiMinimalResidual coeffs "<< chi   <<std::endl; | ||||
|  | ||||
|       //////////////////////////////// | ||||
|       //p_m=(v_m - \epsilon p_{m-1} - \theta p_{m-2}) / \chi | ||||
|       //////////////////////////////// | ||||
|       p_m = (1.0/chi) * v_m - (epsilon/chi) * p_m_minus_1 - (theta/chi) * p_m_minus_2; | ||||
|  | ||||
|       //////////////////////////////////////////////////////////////// | ||||
|       //      \psi = \psi + c_{m+1} \mu p_m	 | ||||
|       //////////////////////////////////////////////////////////////// | ||||
|       x = x + ( c_m_plus_1 * mu ) * p_m; | ||||
|  | ||||
|       //////////////////////////////////////// | ||||
|       // | ||||
|       //////////////////////////////////////// | ||||
|       mu              = -s_m_plus_1 * mu; | ||||
|       delta_m_minus_1 = delta_m; | ||||
|       c_m_minus_1     = c_m; | ||||
|       c_m             = c_m_plus_1; | ||||
|       s_m_minus_1     = s_m; | ||||
|       s_m             = s_m_plus_1; | ||||
|  | ||||
|       //////////////////////////////////// | ||||
|       // Could use pointer swizzle games. | ||||
|       //////////////////////////////////// | ||||
|       v_m_minus_1 = v_m; | ||||
|       v_m         = v_m_plus_1; | ||||
|       p_m_minus_2 = p_m_minus_1; | ||||
|       p_m_minus_1 = p_m; | ||||
|  | ||||
|  | ||||
|       ///////////////////////////////////// | ||||
|       // Convergence checks | ||||
|       ///////////////////////////////////// | ||||
|       z1 = RealD(iter+1.0); | ||||
|       z2 = z1 + 1.0; | ||||
|       tau2 = tau2 *( z2 / z1 ) * s_m * s_m; | ||||
|       std::cout << " QuasiMinimumResidual iteration "<< iter<<std::endl; | ||||
|       std::cout << " QuasiMinimumResidual tau bound "<< tau2<<std::endl; | ||||
|  | ||||
|       // Compute true residual | ||||
|       mod2r = tau2; | ||||
|       if ( 1 || (tau2 < (100.0 * target2)) ) { | ||||
| 	LinOp.Op(x,tmp); | ||||
| 	r = b - tmp; | ||||
| 	mod2r = norm2(r); | ||||
| 	std::cout << " QuasiMinimumResidual true residual is "<< mod2r<<std::endl; | ||||
|       } | ||||
|  | ||||
|  | ||||
|       if ( mod2r < target2 ) {  | ||||
|  | ||||
| 	std::cout << " QuasiMinimumResidual has converged"<<std::endl; | ||||
| 	return; | ||||
|  | ||||
|       } | ||||
|  | ||||
|     } | ||||
|  | ||||
|  | ||||
|   } | ||||
| #endif | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
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								Grid/algorithms/iterative/SchurRedBlack.h
									
									
									
									
									
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										732
									
								
								Grid/algorithms/iterative/SchurRedBlack.h
									
									
									
									
									
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							| @@ -0,0 +1,732 @@ | ||||
|     /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/iterative/SchurRedBlack.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #ifndef GRID_SCHUR_RED_BLACK_H | ||||
| #define GRID_SCHUR_RED_BLACK_H | ||||
|  | ||||
|  | ||||
|   /* | ||||
|    * Red black Schur decomposition | ||||
|    * | ||||
|    *  M = (Mee Meo) =  (1             0 )   (Mee   0               )  (1 Mee^{-1} Meo) | ||||
|    *      (Moe Moo)    (Moe Mee^-1    1 )   (0   Moo-Moe Mee^-1 Meo)  (0   1         ) | ||||
|    *                =         L                     D                     U | ||||
|    * | ||||
|    * L^-1 = (1              0 ) | ||||
|    *        (-MoeMee^{-1}   1 )    | ||||
|    * L^{dag} = ( 1       Mee^{-dag} Moe^{dag} ) | ||||
|    *           ( 0       1                    ) | ||||
|    * L^{-d}  = ( 1      -Mee^{-dag} Moe^{dag} ) | ||||
|    *           ( 0       1                    ) | ||||
|    * | ||||
|    * U^-1 = (1   -Mee^{-1} Meo) | ||||
|    *        (0    1           ) | ||||
|    * U^{dag} = ( 1                 0) | ||||
|    *           (Meo^dag Mee^{-dag} 1) | ||||
|    * U^{-dag} = (  1                 0) | ||||
|    *            (-Meo^dag Mee^{-dag} 1) | ||||
|    *********************** | ||||
|    *     M psi = eta | ||||
|    *********************** | ||||
|    *Odd | ||||
|    * i)                 D_oo psi_o =  L^{-1}  eta_o | ||||
|    *                        eta_o' = (D_oo)^dag (eta_o - Moe Mee^{-1} eta_e) | ||||
|    * | ||||
|    * Wilson: | ||||
|    *      (D_oo)^{\dag} D_oo psi_o = (D_oo)^dag L^{-1}  eta_o | ||||
|    * Stag: | ||||
|    *      D_oo psi_o = L^{-1}  eta =    (eta_o - Moe Mee^{-1} eta_e) | ||||
|    * | ||||
|    * L^-1 eta_o= (1              0 ) (e | ||||
|    *             (-MoeMee^{-1}   1 )    | ||||
|    * | ||||
|    *Even | ||||
|    * ii)  Mee psi_e + Meo psi_o = src_e | ||||
|    * | ||||
|    *   => sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|    * | ||||
|    *  | ||||
|    * TODO: Other options: | ||||
|    *  | ||||
|    * a) change checkerboards for Schur e<->o | ||||
|    * | ||||
|    * Left precon by Moo^-1 | ||||
|    * b) Doo^{dag} M_oo^-dag Moo^-1 Doo psi_0 =  (D_oo)^dag M_oo^-dag Moo^-1 L^{-1}  eta_o | ||||
|    *                              eta_o'     = (D_oo)^dag  M_oo^-dag Moo^-1 (eta_o - Moe Mee^{-1} eta_e) | ||||
|    * | ||||
|    * Right precon by Moo^-1 | ||||
|    * c) M_oo^-dag Doo^{dag} Doo Moo^-1 phi_0 = M_oo^-dag (D_oo)^dag L^{-1}  eta_o | ||||
|    *                              eta_o'     = M_oo^-dag (D_oo)^dag (eta_o - Moe Mee^{-1} eta_e) | ||||
|    *                              psi_o = M_oo^-1 phi_o | ||||
|    * TODO: Deflation  | ||||
|    */ | ||||
| namespace Grid { | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Use base class to share code | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Take a matrix and form a Red Black solver calling a Herm solver | ||||
|   // Use of RB info prevents making SchurRedBlackSolve conform to standard interface | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   template<class Field> class SchurRedBlackBase { | ||||
|   protected: | ||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|     OperatorFunction<Field> & _HermitianRBSolver; | ||||
|     int CBfactorise; | ||||
|     bool subGuess; | ||||
|     bool useSolnAsInitGuess; // if true user-supplied solution vector is used as initial guess for solver | ||||
|   public: | ||||
|  | ||||
|     SchurRedBlackBase(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||
|         const bool _solnAsInitGuess = false)  : | ||||
|     _HermitianRBSolver(HermitianRBSolver), | ||||
|     useSolnAsInitGuess(_solnAsInitGuess) | ||||
|     {  | ||||
|       CBfactorise = 0; | ||||
|       subtractGuess(initSubGuess); | ||||
|     }; | ||||
|     void subtractGuess(const bool initSubGuess) | ||||
|     { | ||||
|       subGuess = initSubGuess; | ||||
|     } | ||||
|     bool isSubtractGuess(void) | ||||
|     { | ||||
|       return subGuess; | ||||
|     } | ||||
|  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Shared code | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     void operator() (Matrix & _Matrix,const Field &in, Field &out){ | ||||
|       ZeroGuesser<Field> guess; | ||||
|       (*this)(_Matrix,in,out,guess); | ||||
|     } | ||||
|     void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out)  | ||||
|     { | ||||
|       ZeroGuesser<Field> guess; | ||||
|       (*this)(_Matrix,in,out,guess); | ||||
|     } | ||||
|  | ||||
|     void RedBlackSource(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &src_o)  | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       Field tmp(grid); | ||||
|       int nblock = in.size(); | ||||
|       for(int b=0;b<nblock;b++){ | ||||
| 	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||
|       } | ||||
|     } | ||||
|     // James can write his own deflated guesser | ||||
|     // with optimised code for the inner products | ||||
|     //    RedBlackSolveSplitGrid(); | ||||
|     //    RedBlackSolve(_Matrix,src_o,sol_o);  | ||||
|  | ||||
|     void RedBlackSolution(Matrix &_Matrix, const std::vector<Field> &in, const std::vector<Field> &sol_o, std::vector<Field> &out) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       Field tmp(grid); | ||||
|       int nblock = in.size(); | ||||
|       for(int b=0;b<nblock;b++) { | ||||
| 	pickCheckerboard(Even,tmp,in[b]); | ||||
| 	RedBlackSolution(_Matrix,sol_o[b],tmp,out[b]); | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     template<class Guesser> | ||||
|     void operator()(Matrix &_Matrix, const std::vector<Field> &in, std::vector<Field> &out,Guesser &guess)  | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|       int nblock = in.size(); | ||||
|  | ||||
|       std::vector<Field> src_o(nblock,grid); | ||||
|       std::vector<Field> sol_o(nblock,grid); | ||||
|        | ||||
|       std::vector<Field> guess_save; | ||||
|  | ||||
|       Field resid(fgrid); | ||||
|       Field tmp(grid); | ||||
|  | ||||
|       //////////////////////////////////////////////// | ||||
|       // Prepare RedBlack source | ||||
|       //////////////////////////////////////////////// | ||||
|       RedBlackSource(_Matrix,in,src_o); | ||||
| 	//      for(int b=0;b<nblock;b++){ | ||||
| 	//	RedBlackSource(_Matrix,in[b],tmp,src_o[b]); | ||||
| 	//      } | ||||
|        | ||||
|       //////////////////////////////////////////////// | ||||
|       // Make the guesses | ||||
|       //////////////////////////////////////////////// | ||||
|       if ( subGuess ) guess_save.resize(nblock,grid); | ||||
|  | ||||
|        | ||||
|       if(useSolnAsInitGuess) { | ||||
|         for(int b=0;b<nblock;b++){ | ||||
|           pickCheckerboard(Odd, sol_o[b], out[b]); | ||||
|         } | ||||
|       } else { | ||||
|         guess(src_o, sol_o);  | ||||
|       } | ||||
|  | ||||
| 	    if ( subGuess ) {  | ||||
|         for(int b=0;b<nblock;b++){ | ||||
|           guess_save[b] = sol_o[b]; | ||||
|         } | ||||
|       } | ||||
|       ////////////////////////////////////////////////////////////// | ||||
|       // Call the block solver | ||||
|       ////////////////////////////////////////////////////////////// | ||||
|       std::cout<<GridLogMessage << "SchurRedBlackBase calling the solver for "<<nblock<<" RHS" <<std::endl; | ||||
|       RedBlackSolve(_Matrix,src_o,sol_o); | ||||
|  | ||||
|       //////////////////////////////////////////////// | ||||
|       // A2A boolean behavioural control & reconstruct other checkerboard | ||||
|       //////////////////////////////////////////////// | ||||
|       for(int b=0;b<nblock;b++) { | ||||
|  | ||||
| 	if (subGuess)   sol_o[b] = sol_o[b] - guess_save[b]; | ||||
|  | ||||
| 	///////// Needs even source ////////////// | ||||
| 	pickCheckerboard(Even,tmp,in[b]); | ||||
| 	RedBlackSolution(_Matrix,sol_o[b],tmp,out[b]); | ||||
|  | ||||
| 	///////////////////////////////////////////////// | ||||
| 	// Check unprec residual if possible | ||||
| 	///////////////////////////////////////////////// | ||||
| 	if ( ! subGuess ) { | ||||
| 	  _Matrix.M(out[b],resid);  | ||||
| 	  resid = resid-in[b]; | ||||
| 	  RealD ns = norm2(in[b]); | ||||
| 	  RealD nr = norm2(resid); | ||||
| 	 | ||||
| 	  std::cout<<GridLogMessage<< "SchurRedBlackBase solver true unprec resid["<<b<<"] "<<std::sqrt(nr/ns) << std::endl; | ||||
| 	} else { | ||||
| 	  std::cout<<GridLogMessage<< "SchurRedBlackBase Guess subtracted after solve["<<b<<"] " << std::endl; | ||||
| 	} | ||||
|  | ||||
|       } | ||||
|     } | ||||
|     template<class Guesser> | ||||
|     void operator() (Matrix & _Matrix,const Field &in, Field &out,Guesser &guess){ | ||||
|  | ||||
|       // FIXME CGdiagonalMee not implemented virtual function | ||||
|       // FIXME use CBfactorise to control schur decomp | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field resid(fgrid); | ||||
|       Field src_o(grid); | ||||
|       Field src_e(grid); | ||||
|       Field sol_o(grid); | ||||
|  | ||||
|       //////////////////////////////////////////////// | ||||
|       // RedBlack source | ||||
|       //////////////////////////////////////////////// | ||||
|       RedBlackSource(_Matrix,in,src_e,src_o); | ||||
|  | ||||
|       //////////////////////////////// | ||||
|       // Construct the guess | ||||
|       //////////////////////////////// | ||||
|       if(useSolnAsInitGuess) { | ||||
|         pickCheckerboard(Odd, sol_o, out); | ||||
|       } else { | ||||
|         guess(src_o,sol_o); | ||||
|       } | ||||
|  | ||||
|       Field  guess_save(grid); | ||||
|       guess_save = sol_o; | ||||
|  | ||||
|       ////////////////////////////////////////////////////////////// | ||||
|       // Call the red-black solver | ||||
|       ////////////////////////////////////////////////////////////// | ||||
|       RedBlackSolve(_Matrix,src_o,sol_o); | ||||
|  | ||||
|       //////////////////////////////////////////////// | ||||
|       // Fionn A2A boolean behavioural control | ||||
|       //////////////////////////////////////////////// | ||||
|       if (subGuess)      sol_o= sol_o-guess_save; | ||||
|  | ||||
|       /////////////////////////////////////////////////// | ||||
|       // RedBlack solution needs the even source | ||||
|       /////////////////////////////////////////////////// | ||||
|       RedBlackSolution(_Matrix,sol_o,src_e,out); | ||||
|  | ||||
|       // Verify the unprec residual | ||||
|       if ( ! subGuess ) { | ||||
|         _Matrix.M(out,resid);  | ||||
|         resid = resid-in; | ||||
|         RealD ns = norm2(in); | ||||
|         RealD nr = norm2(resid); | ||||
|  | ||||
|         std::cout<<GridLogMessage << "SchurRedBlackBase solver true unprec resid "<< std::sqrt(nr/ns) << std::endl; | ||||
|       } else { | ||||
|         std::cout << GridLogMessage << "SchurRedBlackBase Guess subtracted after solve." << std::endl; | ||||
|       } | ||||
|     }      | ||||
|      | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Override in derived.  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     virtual void RedBlackSource  (Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o)                =0; | ||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol)          =0; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o)                           =0; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o)=0; | ||||
|  | ||||
|   }; | ||||
|  | ||||
|   template<class Field> class SchurRedBlackStaggeredSolve : public SchurRedBlackBase<Field> { | ||||
|   public: | ||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|     SchurRedBlackStaggeredSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||
|         const bool _solnAsInitGuess = false)  | ||||
|       :    SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess)  | ||||
|     { | ||||
|     } | ||||
|  | ||||
|     ////////////////////////////////////////////////////// | ||||
|     // Override RedBlack specialisation | ||||
|     ////////////////////////////////////////////////////// | ||||
|     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   tmp(grid); | ||||
|       Field  Mtmp(grid); | ||||
|  | ||||
|       pickCheckerboard(Even,src_e,src); | ||||
|       pickCheckerboard(Odd ,src_o,src); | ||||
|  | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // src_o = (source_o - Moe MeeInv source_e) | ||||
|       ///////////////////////////////////////////////////// | ||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||
|       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||
|  | ||||
|       _Matrix.Mooee(tmp,src_o); // Extra factor of "m" in source from dumb choice of matrix norm. | ||||
|     } | ||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e_c,Field &sol) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   tmp(grid); | ||||
|       Field   sol_e(grid); | ||||
|       Field   src_e(grid); | ||||
|  | ||||
|       src_e = src_e_c; // Const correctness | ||||
|  | ||||
|       /////////////////////////////////////////////////// | ||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|       /////////////////////////////////////////////////// | ||||
|       _Matrix.Meooe(sol_o,tmp);        assert(  tmp.Checkerboard()   ==Even); | ||||
|       src_e = src_e-tmp;               assert(  src_e.Checkerboard() ==Even); | ||||
|       _Matrix.MooeeInv(src_e,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||
|       | ||||
|       setCheckerboard(sol,sol_e); assert(  sol_e.Checkerboard() ==Even); | ||||
|       setCheckerboard(sol,sol_o); assert(  sol_o.Checkerboard() ==Odd ); | ||||
|     } | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||
|     { | ||||
|       SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.Checkerboard()==Odd); | ||||
|     }; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||
|     { | ||||
|       SchurStaggeredOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||
|     } | ||||
|   }; | ||||
|   template<class Field> using SchurRedBlackStagSolve = SchurRedBlackStaggeredSolve<Field>; | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Site diagonal has Mooee on it. | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   template<class Field> class SchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field> { | ||||
|   public: | ||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|     SchurRedBlackDiagMooeeSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||
|         const bool _solnAsInitGuess = false)   | ||||
|       : SchurRedBlackBase<Field> (HermitianRBSolver,initSubGuess,_solnAsInitGuess) {}; | ||||
|  | ||||
|  | ||||
|     ////////////////////////////////////////////////////// | ||||
|     // Override RedBlack specialisation | ||||
|     ////////////////////////////////////////////////////// | ||||
|     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   tmp(grid); | ||||
|       Field  Mtmp(grid); | ||||
|  | ||||
|       pickCheckerboard(Even,src_e,src); | ||||
|       pickCheckerboard(Odd ,src_o,src); | ||||
|  | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|       ///////////////////////////////////////////////////// | ||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||
|       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||
|  | ||||
|       // get the right MpcDag | ||||
|       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.Checkerboard() ==Odd);        | ||||
|  | ||||
|     } | ||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   tmp(grid); | ||||
|       Field  sol_e(grid); | ||||
|       Field  src_e_i(grid); | ||||
|       /////////////////////////////////////////////////// | ||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|       /////////////////////////////////////////////////// | ||||
|       _Matrix.Meooe(sol_o,tmp);          assert(  tmp.Checkerboard()   ==Even); | ||||
|       src_e_i = src_e-tmp;               assert(  src_e_i.Checkerboard() ==Even); | ||||
|       _Matrix.MooeeInv(src_e_i,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||
|       | ||||
|       setCheckerboard(sol,sol_e); assert(  sol_e.Checkerboard() ==Even); | ||||
|       setCheckerboard(sol,sol_o); assert(  sol_o.Checkerboard() ==Odd ); | ||||
|     } | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||
|     { | ||||
|       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  assert(sol_o.Checkerboard()==Odd); | ||||
|     }; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||
|     { | ||||
|       SchurDiagMooeeOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   template<class Field> class NonHermitianSchurRedBlackDiagMooeeSolve : public SchurRedBlackBase<Field>  | ||||
|   { | ||||
|     public: | ||||
|       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|       NonHermitianSchurRedBlackDiagMooeeSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||
|           const bool _solnAsInitGuess = false)   | ||||
|       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||
|  | ||||
|       ////////////////////////////////////////////////////// | ||||
|       // Override RedBlack specialisation | ||||
|       ////////////////////////////////////////////////////// | ||||
|       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field  tmp(grid); | ||||
|         Field Mtmp(grid); | ||||
|  | ||||
|         pickCheckerboard(Even, src_e, src); | ||||
|         pickCheckerboard(Odd , src_o, src); | ||||
|  | ||||
|         ///////////////////////////////////////////////////// | ||||
|         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|         ///////////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||
|         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||
|         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||
|       } | ||||
|        | ||||
|       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field     tmp(grid); | ||||
|         Field   sol_e(grid); | ||||
|         Field src_e_i(grid); | ||||
|          | ||||
|         /////////////////////////////////////////////////// | ||||
|         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|         /////////////////////////////////////////////////// | ||||
|         _Matrix.Meooe(sol_o, tmp);         assert(     tmp.Checkerboard() == Even ); | ||||
|         src_e_i = src_e - tmp;             assert( src_e_i.Checkerboard() == Even ); | ||||
|         _Matrix.MooeeInv(src_e_i, sol_e);  assert(   sol_e.Checkerboard() == Even ); | ||||
|         | ||||
|         setCheckerboard(sol, sol_e); assert( sol_e.Checkerboard() == Even ); | ||||
|         setCheckerboard(sol, sol_o); assert( sol_o.Checkerboard() == Odd  ); | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  assert(sol_o.Checkerboard() == Odd); | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o, std::vector<Field>& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagMooeeOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||
|       } | ||||
|   }; | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Site diagonal is identity, left preconditioned by Mee^inv | ||||
|   // ( 1 - Mee^inv Meo Moo^inv Moe ) phi = Mee_inv ( Mee - Meo Moo^inv Moe Mee^inv  ) phi =  Mee_inv eta | ||||
|   // | ||||
|   // Solve: | ||||
|   // ( 1 - Mee^inv Meo Moo^inv Moe )^dag ( 1 - Mee^inv Meo Moo^inv Moe ) phi = ( 1 - Mee^inv Meo Moo^inv Moe )^dag  Mee_inv eta | ||||
|   // | ||||
|   // Old notation e<->o | ||||
|   // | ||||
|   // Left precon by Moo^-1 | ||||
|   //  b) (Doo^{dag} M_oo^-dag) (Moo^-1 Doo) psi_o =  [ (D_oo)^dag M_oo^-dag ] Moo^-1 L^{-1}  eta_o | ||||
|   //                                   eta_o'     = (D_oo)^dag  M_oo^-dag Moo^-1 (eta_o - Moe Mee^{-1} eta_e) | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   template<class Field> class SchurRedBlackDiagOneSolve : public SchurRedBlackBase<Field> { | ||||
|   public: | ||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|     ///////////////////////////////////////////////////// | ||||
|     // Wrap the usual normal equations Schur trick | ||||
|     ///////////////////////////////////////////////////// | ||||
|   SchurRedBlackDiagOneSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||
|       const bool _solnAsInitGuess = false)   | ||||
|     : SchurRedBlackBase<Field>(HermitianRBSolver,initSubGuess,_solnAsInitGuess) {}; | ||||
|  | ||||
|     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       SchurDiagOneOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|        | ||||
|       Field   tmp(grid); | ||||
|       Field  Mtmp(grid); | ||||
|  | ||||
|       pickCheckerboard(Even,src_e,src); | ||||
|       pickCheckerboard(Odd ,src_o,src); | ||||
|      | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // src_o = Mpcdag *MooeeInv * (source_o - Moe MeeInv source_e) | ||||
|       ///////////////////////////////////////////////////// | ||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||
|       Mtmp=src_o-Mtmp;                  | ||||
|       _Matrix.MooeeInv(Mtmp,tmp);      assert( tmp.Checkerboard() ==Odd);      | ||||
|        | ||||
|       // get the right MpcDag | ||||
|       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.Checkerboard() ==Odd);        | ||||
|     } | ||||
|  | ||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   tmp(grid); | ||||
|       Field   sol_e(grid); | ||||
|  | ||||
|  | ||||
|       /////////////////////////////////////////////////// | ||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|       /////////////////////////////////////////////////// | ||||
|       _Matrix.Meooe(sol_o,tmp);    assert(  tmp.Checkerboard()   ==Even); | ||||
|       tmp = src_e-tmp;             assert(  src_e.Checkerboard() ==Even); | ||||
|       _Matrix.MooeeInv(tmp,sol_e); assert(  sol_e.Checkerboard() ==Even); | ||||
|       | ||||
|       setCheckerboard(sol,sol_e);  assert(  sol_e.Checkerboard() ==Even); | ||||
|       setCheckerboard(sol,sol_o);  assert(  sol_o.Checkerboard() ==Odd ); | ||||
|     }; | ||||
|  | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||
|     { | ||||
|       SchurDiagOneOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o); | ||||
|     }; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||
|     { | ||||
|       SchurDiagOneOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Site diagonal is identity, right preconditioned by Mee^inv | ||||
|   // ( 1 - Meo Moo^inv Moe Mee^inv  ) phi =( 1 - Meo Moo^inv Moe Mee^inv  ) Mee psi =  = eta  = eta | ||||
|   //=> psi = MeeInv phi | ||||
|   /////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   template<class Field> class SchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field> { | ||||
|   public: | ||||
|     typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|     ///////////////////////////////////////////////////// | ||||
|     // Wrap the usual normal equations Schur trick | ||||
|     ///////////////////////////////////////////////////// | ||||
|   SchurRedBlackDiagTwoSolve(OperatorFunction<Field> &HermitianRBSolver, const bool initSubGuess = false, | ||||
|       const bool _solnAsInitGuess = false)   | ||||
|     : SchurRedBlackBase<Field>(HermitianRBSolver,initSubGuess,_solnAsInitGuess) {}; | ||||
|  | ||||
|     virtual void RedBlackSource(Matrix & _Matrix,const Field &src, Field &src_e,Field &src_o) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|        | ||||
|       Field   tmp(grid); | ||||
|       Field  Mtmp(grid); | ||||
|  | ||||
|       pickCheckerboard(Even,src_e,src); | ||||
|       pickCheckerboard(Odd ,src_o,src); | ||||
|      | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|       ///////////////////////////////////////////////////// | ||||
|       _Matrix.MooeeInv(src_e,tmp);     assert(  tmp.Checkerboard() ==Even); | ||||
|       _Matrix.Meooe   (tmp,Mtmp);      assert( Mtmp.Checkerboard() ==Odd);      | ||||
|       tmp=src_o-Mtmp;                  assert(  tmp.Checkerboard() ==Odd);      | ||||
|  | ||||
|       // get the right MpcDag | ||||
|       _HermOpEO.MpcDag(tmp,src_o);     assert(src_o.Checkerboard() ==Odd);        | ||||
|     } | ||||
|  | ||||
|     virtual void RedBlackSolution(Matrix & _Matrix,const Field &sol_o, const Field &src_e,Field &sol) | ||||
|     { | ||||
|       GridBase *grid = _Matrix.RedBlackGrid(); | ||||
|       GridBase *fgrid= _Matrix.Grid(); | ||||
|  | ||||
|       Field   sol_o_i(grid); | ||||
|       Field   tmp(grid); | ||||
|       Field   sol_e(grid); | ||||
|  | ||||
|       //////////////////////////////////////////////// | ||||
|       // MooeeInv due to pecond | ||||
|       //////////////////////////////////////////////// | ||||
|       _Matrix.MooeeInv(sol_o,tmp); | ||||
|       sol_o_i = tmp; | ||||
|  | ||||
|       /////////////////////////////////////////////////// | ||||
|       // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|       /////////////////////////////////////////////////// | ||||
|       _Matrix.Meooe(sol_o_i,tmp);    assert(  tmp.Checkerboard()   ==Even); | ||||
|       tmp = src_e-tmp;               assert(  src_e.Checkerboard() ==Even); | ||||
|       _Matrix.MooeeInv(tmp,sol_e);   assert(  sol_e.Checkerboard() ==Even); | ||||
|       | ||||
|       setCheckerboard(sol,sol_e);    assert(  sol_e.Checkerboard() ==Even); | ||||
|       setCheckerboard(sol,sol_o_i);  assert(  sol_o_i.Checkerboard() ==Odd ); | ||||
|     }; | ||||
|  | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const Field &src_o, Field &sol_o) | ||||
|     { | ||||
|       SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o); | ||||
|     }; | ||||
|     virtual void RedBlackSolve   (Matrix & _Matrix,const std::vector<Field> &src_o,  std::vector<Field> &sol_o) | ||||
|     { | ||||
|       SchurDiagTwoOperator<Matrix,Field> _HermOpEO(_Matrix); | ||||
|       this->_HermitianRBSolver(_HermOpEO,src_o,sol_o);  | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   template<class Field> class NonHermitianSchurRedBlackDiagTwoSolve : public SchurRedBlackBase<Field>  | ||||
|   { | ||||
|     public: | ||||
|       typedef CheckerBoardedSparseMatrixBase<Field> Matrix; | ||||
|  | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // Wrap the usual normal equations Schur trick | ||||
|       ///////////////////////////////////////////////////// | ||||
|       NonHermitianSchurRedBlackDiagTwoSolve(OperatorFunction<Field>& RBSolver, const bool initSubGuess = false, | ||||
|           const bool _solnAsInitGuess = false)   | ||||
|       : SchurRedBlackBase<Field>(RBSolver, initSubGuess, _solnAsInitGuess) {}; | ||||
|  | ||||
|       virtual void RedBlackSource(Matrix& _Matrix, const Field& src, Field& src_e, Field& src_o) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field  tmp(grid); | ||||
|         Field Mtmp(grid); | ||||
|  | ||||
|         pickCheckerboard(Even, src_e, src); | ||||
|         pickCheckerboard(Odd , src_o, src); | ||||
|        | ||||
|         ///////////////////////////////////////////////////// | ||||
|         // src_o = Mdag * (source_o - Moe MeeInv source_e) | ||||
|         ///////////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(src_e, tmp);   assert(   tmp.Checkerboard() == Even ); | ||||
|         _Matrix.Meooe   (tmp, Mtmp);    assert(  Mtmp.Checkerboard() == Odd  );      | ||||
|         src_o -= Mtmp;                  assert( src_o.Checkerboard() == Odd  );      | ||||
|       } | ||||
|  | ||||
|       virtual void RedBlackSolution(Matrix& _Matrix, const Field& sol_o, const Field& src_e, Field& sol) | ||||
|       { | ||||
|         GridBase* grid  = _Matrix.RedBlackGrid(); | ||||
|         GridBase* fgrid = _Matrix.Grid(); | ||||
|  | ||||
|         Field sol_o_i(grid); | ||||
|         Field     tmp(grid); | ||||
|         Field   sol_e(grid); | ||||
|  | ||||
|         //////////////////////////////////////////////// | ||||
|         // MooeeInv due to pecond | ||||
|         //////////////////////////////////////////////// | ||||
|         _Matrix.MooeeInv(sol_o, tmp); | ||||
|         sol_o_i = tmp; | ||||
|  | ||||
|         /////////////////////////////////////////////////// | ||||
|         // sol_e = M_ee^-1 * ( src_e - Meo sol_o )... | ||||
|         /////////////////////////////////////////////////// | ||||
|         _Matrix.Meooe(sol_o_i, tmp);    assert(   tmp.Checkerboard() == Even ); | ||||
|         tmp = src_e - tmp;              assert( src_e.Checkerboard() == Even ); | ||||
|         _Matrix.MooeeInv(tmp, sol_e);   assert( sol_e.Checkerboard() == Even ); | ||||
|         | ||||
|         setCheckerboard(sol, sol_e);    assert(   sol_e.Checkerboard() == Even ); | ||||
|         setCheckerboard(sol, sol_o_i);  assert( sol_o_i.Checkerboard() == Odd  ); | ||||
|       }; | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const Field& src_o, Field& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o); | ||||
|       }; | ||||
|  | ||||
|       virtual void RedBlackSolve(Matrix& _Matrix, const std::vector<Field>& src_o,  std::vector<Field>& sol_o) | ||||
|       { | ||||
|         NonHermitianSchurDiagTwoOperator<Matrix,Field> _OpEO(_Matrix); | ||||
|         this->_HermitianRBSolver(_OpEO, src_o, sol_o);  | ||||
|       } | ||||
|   }; | ||||
| } | ||||
|  | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/multigrid/Aggregates.h
									
									
									
									
									
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								Grid/algorithms/multigrid/Aggregates.h
									
									
									
									
									
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							| @@ -0,0 +1,478 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/Aggregates.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Peter Boyle <peterboyle@Peters-MacBook-Pro-2.local> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| inline RealD AggregatePowerLaw(RealD x) | ||||
| { | ||||
|   //  return std::pow(x,-4); | ||||
|   //  return std::pow(x,-3); | ||||
|   return std::pow(x,-5); | ||||
| } | ||||
|  | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class Aggregation { | ||||
| public: | ||||
|   constexpr int Nbasis(void) { return nbasis; }; | ||||
|    | ||||
|   typedef iVector<CComplex,nbasis >             siteVector; | ||||
|   typedef Lattice<siteVector>                 CoarseVector; | ||||
|   typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix; | ||||
|  | ||||
|   typedef Lattice< CComplex >   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj >        FineField; | ||||
|  | ||||
|   GridBase *CoarseGrid; | ||||
|   GridBase *FineGrid; | ||||
|   std::vector<Lattice<Fobj> > subspace; | ||||
|   int checkerboard; | ||||
|   int Checkerboard(void){return checkerboard;} | ||||
|   Aggregation(GridBase *_CoarseGrid,GridBase *_FineGrid,int _checkerboard) :  | ||||
|     CoarseGrid(_CoarseGrid), | ||||
|     FineGrid(_FineGrid), | ||||
|     subspace(nbasis,_FineGrid), | ||||
|     checkerboard(_checkerboard) | ||||
|   { | ||||
|   }; | ||||
|    | ||||
|    | ||||
|   void Orthogonalise(void){ | ||||
|     CoarseScalar InnerProd(CoarseGrid);  | ||||
|     //    std::cout << GridLogMessage <<" Block Gramm-Schmidt pass 1"<<std::endl; | ||||
|     blockOrthogonalise(InnerProd,subspace); | ||||
|   }  | ||||
|   void ProjectToSubspace(CoarseVector &CoarseVec,const FineField &FineVec){ | ||||
|     blockProject(CoarseVec,FineVec,subspace); | ||||
|   } | ||||
|   void PromoteFromSubspace(const CoarseVector &CoarseVec,FineField &FineVec){ | ||||
|     FineVec.Checkerboard() = subspace[0].Checkerboard(); | ||||
|     blockPromote(CoarseVec,FineVec,subspace); | ||||
|   } | ||||
|  | ||||
|   virtual void CreateSubspaceRandom(GridParallelRNG  &RNG) { | ||||
|     int nn=nbasis; | ||||
|     RealD scale; | ||||
|     FineField noise(FineGrid); | ||||
|     for(int b=0;b<nn;b++){ | ||||
|       subspace[b] = Zero(); | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|       subspace[b] = noise; | ||||
|     } | ||||
|   } | ||||
|   virtual void CreateSubspace(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop,int nn=nbasis) | ||||
|   { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     ConjugateGradient<FineField> CG(1.0e-2,100,false); | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|  | ||||
|     for(int b=0;b<nn;b++){ | ||||
|        | ||||
|       subspace[b] = Zero(); | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|        | ||||
|       hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise   ["<<b<<"] <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|  | ||||
|       for(int i=0;i<1;i++){ | ||||
|  | ||||
| 	CG(hermop,noise,subspace[b]); | ||||
|  | ||||
| 	noise = subspace[b]; | ||||
| 	scale = std::pow(norm2(noise),-0.5);  | ||||
| 	noise=noise*scale; | ||||
|  | ||||
|       } | ||||
|  | ||||
|       hermop.Op(noise,Mn); std::cout<<GridLogMessage << "filtered["<<b<<"] <f|MdagM|f> "<<norm2(Mn)<<std::endl; | ||||
|       subspace[b]   = noise; | ||||
|  | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // World of possibilities here. But have tried quite a lot of experiments (250+ jobs run on Summit) | ||||
|   // and this is the best I found | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
|   virtual void CreateSubspaceChebyshev(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop, | ||||
| 				       int nn, | ||||
| 				       double hi, | ||||
| 				       double lo, | ||||
| 				       int orderfilter, | ||||
| 				       int ordermin, | ||||
| 				       int orderstep, | ||||
| 				       double filterlo | ||||
| 				       ) { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|  | ||||
|     // New normalised noise | ||||
|     gaussian(RNG,noise); | ||||
|     scale = std::pow(norm2(noise),-0.5);  | ||||
|     noise=noise*scale; | ||||
|  | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pass-1 : ord "<<orderfilter<<" ["<<lo<<","<<hi<<"]"<<std::endl; | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pass-2 : nbasis"<<nn<<" min " | ||||
| 	      <<ordermin<<" step "<<orderstep | ||||
| 	      <<" lo"<<filterlo<<std::endl; | ||||
|  | ||||
|     // Initial matrix element | ||||
|     hermop.Op(noise,Mn); std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|  | ||||
|     int b =0; | ||||
|     { | ||||
|       // Filter | ||||
|       Chebyshev<FineField> Cheb(lo,hi,orderfilter); | ||||
|       Cheb(hermop,noise,Mn); | ||||
|       // normalise | ||||
|       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale; | ||||
|       subspace[b]   = Mn; | ||||
|       hermop.Op(Mn,tmp);  | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       b++; | ||||
|     } | ||||
|  | ||||
|     // Generate a full sequence of Chebyshevs | ||||
|     { | ||||
|       lo=filterlo; | ||||
|       noise=Mn; | ||||
|  | ||||
|       FineField T0(FineGrid); T0 = noise;   | ||||
|       FineField T1(FineGrid);  | ||||
|       FineField T2(FineGrid); | ||||
|       FineField y(FineGrid); | ||||
|        | ||||
|       FineField *Tnm = &T0; | ||||
|       FineField *Tn  = &T1; | ||||
|       FineField *Tnp = &T2; | ||||
|  | ||||
|       // Tn=T1 = (xscale M + mscale)in | ||||
|       RealD xscale = 2.0/(hi-lo); | ||||
|       RealD mscale = -(hi+lo)/(hi-lo); | ||||
|       hermop.HermOp(T0,y); | ||||
|       T1=y*xscale+noise*mscale; | ||||
|  | ||||
|       for(int n=2;n<=ordermin+orderstep*(nn-2);n++){ | ||||
| 	 | ||||
| 	hermop.HermOp(*Tn,y); | ||||
|  | ||||
| 	autoView( y_v , y, AcceleratorWrite); | ||||
| 	autoView( Tn_v , (*Tn), AcceleratorWrite); | ||||
| 	autoView( Tnp_v , (*Tnp), AcceleratorWrite); | ||||
| 	autoView( Tnm_v , (*Tnm), AcceleratorWrite); | ||||
| 	const int Nsimd = CComplex::Nsimd(); | ||||
| 	accelerator_for(ss, FineGrid->oSites(), Nsimd, { | ||||
| 	  coalescedWrite(y_v[ss],xscale*y_v(ss)+mscale*Tn_v(ss)); | ||||
| 	  coalescedWrite(Tnp_v[ss],2.0*y_v(ss)-Tnm_v(ss)); | ||||
|         }); | ||||
|  | ||||
| 	// Possible more fine grained control is needed than a linear sweep, | ||||
| 	// but huge productivity gain if this is simple algorithm and not a tunable | ||||
| 	int m =1; | ||||
| 	if ( n>=ordermin ) m=n-ordermin; | ||||
| 	if ( (m%orderstep)==0 ) {  | ||||
| 	  Mn=*Tnp; | ||||
| 	  scale = std::pow(norm2(Mn),-0.5);         Mn=Mn*scale; | ||||
| 	  subspace[b] = Mn; | ||||
| 	  hermop.Op(Mn,tmp);  | ||||
| 	  std::cout<<GridLogMessage << n<<" filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
| 	  b++; | ||||
| 	} | ||||
|  | ||||
| 	// Cycle pointers to avoid copies | ||||
| 	FineField *swizzle = Tnm; | ||||
| 	Tnm    =Tn; | ||||
| 	Tn     =Tnp; | ||||
| 	Tnp    =swizzle; | ||||
| 	   | ||||
|       } | ||||
|     } | ||||
|     assert(b==nn); | ||||
|   } | ||||
|   virtual void CreateSubspaceChebyshev(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop, | ||||
| 				       int nn, | ||||
| 				       double hi, | ||||
| 				       double lo, | ||||
| 				       int orderfilter | ||||
| 				       ) { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|  | ||||
|     // New normalised noise | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pure noise : ord "<<orderfilter<<" ["<<lo<<","<<hi<<"]"<<std::endl; | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pure noise  : nbasis "<<nn<<std::endl; | ||||
|  | ||||
|  | ||||
|     for(int b =0;b<nbasis;b++) | ||||
|     { | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|  | ||||
|       // Initial matrix element | ||||
|       hermop.Op(noise,Mn); | ||||
|       if(b==0) std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|  | ||||
|       // Filter | ||||
|       Chebyshev<FineField> Cheb(lo,hi,orderfilter); | ||||
|       Cheb(hermop,noise,Mn); | ||||
|       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale; | ||||
|  | ||||
|       // Refine | ||||
|       Chebyshev<FineField> PowerLaw(lo,hi,1000,AggregatePowerLaw); | ||||
|       noise = Mn; | ||||
|       PowerLaw(hermop,noise,Mn); | ||||
|       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale; | ||||
|  | ||||
|       // normalise | ||||
|       subspace[b]   = Mn; | ||||
|       hermop.Op(Mn,tmp);  | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|     } | ||||
|  | ||||
|   } | ||||
|  | ||||
|   virtual void CreateSubspaceChebyshevPowerLaw(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop, | ||||
| 					       int nn, | ||||
| 					       double hi, | ||||
| 					       int orderfilter | ||||
| 					       ) { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|  | ||||
|     // New normalised noise | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pure noise : ord "<<orderfilter<<" [0,"<<hi<<"]"<<std::endl; | ||||
|     std::cout << GridLogMessage<<" Chebyshev subspace pure noise  : nbasis "<<nn<<std::endl; | ||||
|  | ||||
|     for(int b =0;b<nbasis;b++) | ||||
|     { | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|  | ||||
|       // Initial matrix element | ||||
|       hermop.Op(noise,Mn); | ||||
|       if(b==0) std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|       // Filter | ||||
|       Chebyshev<FineField> Cheb(0.0,hi,orderfilter,AggregatePowerLaw); | ||||
|       Cheb(hermop,noise,Mn); | ||||
|       // normalise | ||||
|       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale; | ||||
|       subspace[b]   = Mn; | ||||
|       hermop.Op(Mn,tmp);  | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|     } | ||||
|  | ||||
|   } | ||||
|   virtual void CreateSubspaceChebyshevNew(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop, | ||||
| 					  double hi | ||||
| 					  ) { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|  | ||||
|     // New normalised noise | ||||
|     for(int b =0;b<nbasis;b++) | ||||
|     { | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|  | ||||
|       // Initial matrix element | ||||
|       hermop.Op(noise,Mn); | ||||
|       if(b==0) std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|       // Filter | ||||
|       //#opt2(x) =  acheb(x,3,90,300)* acheb(x,1,90,50) * acheb(x,0.5,90,200) * acheb(x,0.05,90,400) * acheb(x,0.01,90,1500) | ||||
|       /*266 | ||||
|       Chebyshev<FineField> Cheb1(3.0,hi,300); | ||||
|       Chebyshev<FineField> Cheb2(1.0,hi,50); | ||||
|       Chebyshev<FineField> Cheb3(0.5,hi,300); | ||||
|       Chebyshev<FineField> Cheb4(0.05,hi,500); | ||||
|       Chebyshev<FineField> Cheb5(0.01,hi,2000); | ||||
|       */ | ||||
|       /* 242 */ | ||||
|       /* | ||||
|       Chebyshev<FineField> Cheb3(0.1,hi,300); | ||||
|       Chebyshev<FineField> Cheb2(0.02,hi,1000); | ||||
|       Chebyshev<FineField> Cheb1(0.003,hi,2000); | ||||
|       8? | ||||
|       */ | ||||
|       /* How many?? | ||||
|       */ | ||||
|       Chebyshev<FineField> Cheb2(0.001,hi,2500); // 169 iters on HDCG after refine | ||||
|       Chebyshev<FineField> Cheb1(0.02,hi,600); | ||||
|  | ||||
|       //      Chebyshev<FineField> Cheb2(0.001,hi,1500); | ||||
|       //      Chebyshev<FineField> Cheb1(0.02,hi,600); | ||||
|       Cheb1(hermop,noise,Mn); scale = std::pow(norm2(Mn),-0.5); 	noise=Mn*scale; | ||||
|       hermop.Op(noise,tmp); std::cout<<GridLogMessage << "Cheb1 <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       Cheb2(hermop,noise,Mn); scale = std::pow(norm2(Mn),-0.5); 	noise=Mn*scale; | ||||
|       hermop.Op(noise,tmp); std::cout<<GridLogMessage << "Cheb2 <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       //      Cheb3(hermop,noise,Mn); scale = std::pow(norm2(Mn),-0.5); 	noise=Mn*scale; | ||||
|       //      hermop.Op(noise,tmp); std::cout<<GridLogMessage << "Cheb3 <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       //      Cheb4(hermop,noise,Mn); scale = std::pow(norm2(Mn),-0.5); 	noise=Mn*scale; | ||||
|       //      hermop.Op(noise,tmp); std::cout<<GridLogMessage << "Cheb4 <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       //      Cheb5(hermop,noise,Mn); scale = std::pow(norm2(Mn),-0.5); 	noise=Mn*scale; | ||||
|       //      hermop.Op(noise,tmp); std::cout<<GridLogMessage << "Cheb5 <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|       subspace[b]   = noise; | ||||
|       hermop.Op(subspace[b],tmp);  | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<< " norm " << norm2(noise)<<std::endl; | ||||
|     } | ||||
|  | ||||
|   } | ||||
|  | ||||
|   virtual void CreateSubspaceMultishift(GridParallelRNG  &RNG,LinearOperatorBase<FineField> &hermop, | ||||
| 					double Lo,double tol,int maxit) | ||||
|   { | ||||
|  | ||||
|     RealD scale; | ||||
|  | ||||
|     FineField noise(FineGrid); | ||||
|     FineField Mn(FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|  | ||||
|     // New normalised noise | ||||
|     std::cout << GridLogMessage<<" Multishift subspace : Lo "<<Lo<<std::endl; | ||||
|  | ||||
|     // Filter | ||||
|     // [ 1/6(x+Lo)  - 1/2(x+2Lo) + 1/2(x+3Lo)  -1/6(x+4Lo) = Lo^3 /[ (x+1Lo)(x+2Lo)(x+3Lo)(x+4Lo) ] | ||||
|     // | ||||
|     // 1/(x+Lo)  - 1/(x+2 Lo) | ||||
|     double epsilon      = Lo/3; | ||||
|     std::vector<RealD> alpha({1.0/6.0,-1.0/2.0,1.0/2.0,-1.0/6.0}); | ||||
|     std::vector<RealD> shifts({Lo,Lo+epsilon,Lo+2*epsilon,Lo+3*epsilon}); | ||||
|     std::vector<RealD> tols({tol,tol,tol,tol}); | ||||
|     std::cout << "sizes "<<alpha.size()<<" "<<shifts.size()<<" "<<tols.size()<<std::endl; | ||||
|  | ||||
|     MultiShiftFunction msf(4,0.0,95.0); | ||||
|     std::cout << "msf constructed "<<std::endl; | ||||
|     msf.poles=shifts; | ||||
|     msf.residues=alpha; | ||||
|     msf.tolerances=tols; | ||||
|     msf.norm=0.0; | ||||
|     msf.order=alpha.size(); | ||||
|     ConjugateGradientMultiShift<FineField> MSCG(maxit,msf); | ||||
|      | ||||
|     for(int b =0;b<nbasis;b++) | ||||
|     { | ||||
|       gaussian(RNG,noise); | ||||
|       scale = std::pow(norm2(noise),-0.5);  | ||||
|       noise=noise*scale; | ||||
|  | ||||
|       // Initial matrix element | ||||
|       hermop.Op(noise,Mn); | ||||
|       if(b==0) std::cout<<GridLogMessage << "noise <n|MdagM|n> "<<norm2(Mn)<<std::endl; | ||||
|  | ||||
|       MSCG(hermop,noise,Mn); | ||||
|       scale = std::pow(norm2(Mn),-0.5); 	Mn=Mn*scale; | ||||
|       subspace[b]   = Mn; | ||||
|       hermop.Op(Mn,tmp);  | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|  | ||||
|     } | ||||
|  | ||||
|   } | ||||
|   virtual void RefineSubspace(LinearOperatorBase<FineField> &hermop, | ||||
| 			      double Lo,double tol,int maxit) | ||||
|   { | ||||
|     FineField tmp(FineGrid); | ||||
|     for(int b =0;b<nbasis;b++) | ||||
|     { | ||||
|       ConjugateGradient<FineField>  CGsloppy(tol,maxit,false); | ||||
|       ShiftedHermOpLinearOperator<FineField> ShiftedFineHermOp(hermop,Lo); | ||||
|       tmp=Zero(); | ||||
|       CGsloppy(hermop,subspace[b],tmp); | ||||
|       RealD scale = std::pow(norm2(tmp),-0.5); 	tmp=tmp*scale; | ||||
|       subspace[b]=tmp; | ||||
|       hermop.Op(subspace[b],tmp); | ||||
|       std::cout<<GridLogMessage << "filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|     } | ||||
|   } | ||||
|   virtual void RefineSubspaceHDCG(LinearOperatorBase<FineField> &hermop, | ||||
| 				  TwoLevelADEF2mrhs<FineField,CoarseVector> & theHDCG, | ||||
| 				  int nrhs) | ||||
|   { | ||||
|     std::vector<FineField> src_mrhs(nrhs,FineGrid); | ||||
|     std::vector<FineField> res_mrhs(nrhs,FineGrid); | ||||
|     FineField tmp(FineGrid); | ||||
|     for(int b =0;b<nbasis;b+=nrhs) | ||||
|     { | ||||
|       tmp = subspace[b]; | ||||
|       RealD scale = std::pow(norm2(tmp),-0.5); 	tmp=tmp*scale; | ||||
|       subspace[b] =tmp; | ||||
|       hermop.Op(subspace[b],tmp); | ||||
|       std::cout<<GridLogMessage << "before filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|  | ||||
|       for(int r=0;r<MIN(nbasis-b,nrhs);r++){ | ||||
| 	src_mrhs[r] = subspace[b+r]; | ||||
|       } | ||||
|       for(int r=0;r<nrhs;r++){ | ||||
| 	res_mrhs[r] = Zero(); | ||||
|       } | ||||
|       theHDCG(src_mrhs,res_mrhs); | ||||
|  | ||||
|       for(int r=0;r<MIN(nbasis-b,nrhs);r++){ | ||||
| 	tmp = res_mrhs[r]; | ||||
| 	RealD scale = std::pow(norm2(tmp),-0.5); tmp=tmp*scale; | ||||
| 	subspace[b+r]=tmp; | ||||
|       } | ||||
|       hermop.Op(subspace[b],tmp); | ||||
|       std::cout<<GridLogMessage << "after filt ["<<b<<"] <n|MdagM|n> "<<norm2(tmp)<<std::endl; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|    | ||||
|    | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										837
									
								
								Grid/algorithms/multigrid/CoarsenedMatrix.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										837
									
								
								Grid/algorithms/multigrid/CoarsenedMatrix.h
									
									
									
									
									
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							| @@ -0,0 +1,837 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/CoarsenedMatrix.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
| Author: Peter Boyle <peterboyle@Peters-MacBook-Pro-2.local> | ||||
| Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef  GRID_ALGORITHM_COARSENED_MATRIX_H | ||||
| #define  GRID_ALGORITHM_COARSENED_MATRIX_H | ||||
|  | ||||
| #include <Grid/qcd/QCD.h> // needed for Dagger(Yes|No), Inverse(Yes|No) | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<class vobj,class CComplex> | ||||
| inline void blockMaskedInnerProduct(Lattice<CComplex> &CoarseInner, | ||||
| 				    const Lattice<decltype(innerProduct(vobj(),vobj()))> &FineMask, | ||||
| 				    const Lattice<vobj> &fineX, | ||||
| 				    const Lattice<vobj> &fineY) | ||||
| { | ||||
|   typedef decltype(innerProduct(vobj(),vobj())) dotp; | ||||
|  | ||||
|   GridBase *coarse(CoarseInner.Grid()); | ||||
|   GridBase *fine  (fineX.Grid()); | ||||
|  | ||||
|   Lattice<dotp> fine_inner(fine); fine_inner.Checkerboard() = fineX.Checkerboard(); | ||||
|   Lattice<dotp> fine_inner_msk(fine); | ||||
|  | ||||
|   // Multiply could be fused with innerProduct | ||||
|   // Single block sum kernel could do both masks. | ||||
|   fine_inner = localInnerProduct(fineX,fineY); | ||||
|   mult(fine_inner_msk, fine_inner,FineMask); | ||||
|   blockSum(CoarseInner,fine_inner_msk); | ||||
| } | ||||
|  | ||||
| // Fine Object == (per site) type of fine field | ||||
| // nbasis      == number of deflation vectors | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class CoarsenedMatrix : public CheckerBoardedSparseMatrixBase<Lattice<iVector<CComplex,nbasis > > >  { | ||||
| public: | ||||
|      | ||||
|   typedef iVector<CComplex,nbasis >           siteVector; | ||||
|   typedef Lattice<CComplex >                  CoarseComplexField; | ||||
|   typedef Lattice<siteVector>                 CoarseVector; | ||||
|   typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix; | ||||
|   typedef iMatrix<CComplex,nbasis >  Cobj; | ||||
|   typedef Lattice< CComplex >   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj >        FineField; | ||||
|   typedef CoarseVector FermionField; | ||||
|  | ||||
|   // enrich interface, use default implementation as in FermionOperator /////// | ||||
|   void Dminus(CoarseVector const& in, CoarseVector& out) { out = in; } | ||||
|   void DminusDag(CoarseVector const& in, CoarseVector& out) { out = in; } | ||||
|   void ImportPhysicalFermionSource(CoarseVector const& input, CoarseVector& imported) { imported = input; } | ||||
|   void ImportUnphysicalFermion(CoarseVector const& input, CoarseVector& imported) { imported = input; } | ||||
|   void ExportPhysicalFermionSolution(CoarseVector const& solution, CoarseVector& exported) { exported = solution; }; | ||||
|   void ExportPhysicalFermionSource(CoarseVector const& solution, CoarseVector& exported) { exported = solution; }; | ||||
|  | ||||
|   //////////////////// | ||||
|   // Data members | ||||
|   //////////////////// | ||||
|   Geometry         geom; | ||||
|   GridBase *       _grid;  | ||||
|   GridBase*        _cbgrid; | ||||
|   int hermitian; | ||||
|  | ||||
|   CartesianStencil<siteVector,siteVector,DefaultImplParams> Stencil;  | ||||
|   CartesianStencil<siteVector,siteVector,DefaultImplParams> StencilEven; | ||||
|   CartesianStencil<siteVector,siteVector,DefaultImplParams> StencilOdd; | ||||
|  | ||||
|   std::vector<CoarseMatrix> A; | ||||
|   std::vector<CoarseMatrix> Aeven; | ||||
|   std::vector<CoarseMatrix> Aodd; | ||||
|  | ||||
|   CoarseMatrix AselfInv; | ||||
|   CoarseMatrix AselfInvEven; | ||||
|   CoarseMatrix AselfInvOdd; | ||||
|  | ||||
|   deviceVector<RealD> dag_factor; | ||||
|  | ||||
|   /////////////////////// | ||||
|   // Interface | ||||
|   /////////////////////// | ||||
|   GridBase * Grid(void)         { return _grid; };   // this is all the linalg routines need to know | ||||
|   GridBase * RedBlackGrid()     { return _cbgrid; }; | ||||
|  | ||||
|   int ConstEE() { return 0; } | ||||
|  | ||||
|   void M (const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     conformable(_grid,in.Grid()); | ||||
|     conformable(in.Grid(),out.Grid()); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|  | ||||
|     SimpleCompressor<siteVector> compressor; | ||||
|  | ||||
|     Stencil.HaloExchange(in,compressor); | ||||
|     autoView( in_v , in, AcceleratorRead); | ||||
|     autoView( out_v , out, AcceleratorWrite); | ||||
|     autoView( Stencil_v  , Stencil, AcceleratorRead); | ||||
|     int npoint = geom.npoint; | ||||
|     typedef LatticeView<Cobj> Aview; | ||||
|        | ||||
|     deviceVector<Aview> AcceleratorViewContainer(geom.npoint); | ||||
|     hostVector<Aview>   hAcceleratorViewContainer(geom.npoint); | ||||
|    | ||||
|     for(int p=0;p<geom.npoint;p++) { | ||||
|       hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead); | ||||
|       acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]); | ||||
|     } | ||||
|     Aview *Aview_p = & AcceleratorViewContainer[0]; | ||||
|  | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|     typedef decltype(coalescedRead(in_v[0])) calcVector; | ||||
|     typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
|  | ||||
|     int osites=Grid()->oSites(); | ||||
|  | ||||
|     accelerator_for(sss, Grid()->oSites()*nbasis, Nsimd, { | ||||
|       int ss = sss/nbasis; | ||||
|       int b  = sss%nbasis; | ||||
|       calcComplex res = Zero(); | ||||
|       calcVector nbr; | ||||
|       int ptype; | ||||
|       StencilEntry *SE; | ||||
|  | ||||
|       for(int point=0;point<npoint;point++){ | ||||
|  | ||||
| 	SE=Stencil_v.GetEntry(ptype,point,ss); | ||||
| 	   | ||||
| 	if(SE->_is_local) {  | ||||
| 	  nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
| 	} else { | ||||
| 	  nbr = coalescedRead(Stencil_v.CommBuf()[SE->_offset]); | ||||
| 	} | ||||
| 	acceleratorSynchronise(); | ||||
|  | ||||
| 	for(int bb=0;bb<nbasis;bb++) { | ||||
| 	  res = res + coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb); | ||||
| 	} | ||||
|       } | ||||
|       coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|  | ||||
|     for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose(); | ||||
|   }; | ||||
|  | ||||
|   void Mdag (const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     if(hermitian) { | ||||
|       // corresponds to Petrov-Galerkin coarsening | ||||
|       return M(in,out); | ||||
|     } else { | ||||
|       // corresponds to Galerkin coarsening | ||||
|       return MdagNonHermitian(in, out); | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   void MdagNonHermitian(const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     conformable(_grid,in.Grid()); | ||||
|     conformable(in.Grid(),out.Grid()); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|  | ||||
|     SimpleCompressor<siteVector> compressor; | ||||
|  | ||||
|     Stencil.HaloExchange(in,compressor); | ||||
|     autoView( in_v , in, AcceleratorRead); | ||||
|     autoView( out_v , out, AcceleratorWrite); | ||||
|     autoView( Stencil_v  , Stencil, AcceleratorRead); | ||||
|     int npoint = geom.npoint; | ||||
|     typedef LatticeView<Cobj> Aview; | ||||
|  | ||||
|  | ||||
|     deviceVector<Aview> AcceleratorViewContainer(geom.npoint); | ||||
|     hostVector<Aview>   hAcceleratorViewContainer(geom.npoint); | ||||
|    | ||||
|     for(int p=0;p<geom.npoint;p++) { | ||||
|       hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead); | ||||
|       acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]); | ||||
|     } | ||||
|     Aview *Aview_p = & AcceleratorViewContainer[0]; | ||||
|  | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|     typedef decltype(coalescedRead(in_v[0])) calcVector; | ||||
|     typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
|  | ||||
|     int osites=Grid()->oSites(); | ||||
|  | ||||
|     deviceVector<int> points(geom.npoint); | ||||
|     for(int p=0; p<geom.npoint; p++) {  | ||||
|       acceleratorPut(points[p],geom.points_dagger[p]); | ||||
|     } | ||||
|     auto points_p = &points[0]; | ||||
|  | ||||
|     RealD* dag_factor_p = &dag_factor[0]; | ||||
|  | ||||
|     accelerator_for(sss, Grid()->oSites()*nbasis, Nsimd, { | ||||
|       int ss = sss/nbasis; | ||||
|       int b  = sss%nbasis; | ||||
|       calcComplex res = Zero(); | ||||
|       calcVector nbr; | ||||
|       int ptype; | ||||
|       StencilEntry *SE; | ||||
|  | ||||
|       for(int p=0;p<npoint;p++){ | ||||
|         int point = points_p[p]; | ||||
|  | ||||
| 	SE=Stencil_v.GetEntry(ptype,point,ss); | ||||
|  | ||||
| 	if(SE->_is_local) { | ||||
| 	  nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
| 	} else { | ||||
| 	  nbr = coalescedRead(Stencil_v.CommBuf()[SE->_offset]); | ||||
| 	} | ||||
| 	acceleratorSynchronise(); | ||||
|  | ||||
| 	for(int bb=0;bb<nbasis;bb++) { | ||||
| 	  res = res + dag_factor_p[b*nbasis+bb]*coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb); | ||||
| 	} | ||||
|       } | ||||
|       coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|  | ||||
|     for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose(); | ||||
|   } | ||||
|  | ||||
|   void MdirComms(const CoarseVector &in) | ||||
|   { | ||||
|     SimpleCompressor<siteVector> compressor; | ||||
|     Stencil.HaloExchange(in,compressor); | ||||
|   } | ||||
|   void MdirCalc(const CoarseVector &in, CoarseVector &out, int point) | ||||
|   { | ||||
|     conformable(_grid,in.Grid()); | ||||
|     conformable(_grid,out.Grid()); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|  | ||||
|     typedef LatticeView<Cobj> Aview; | ||||
|  | ||||
|     deviceVector<Aview> AcceleratorViewContainer(geom.npoint); | ||||
|     hostVector<Aview>   hAcceleratorViewContainer(geom.npoint); | ||||
|    | ||||
|     for(int p=0;p<geom.npoint;p++) { | ||||
|       hAcceleratorViewContainer[p] = A[p].View(AcceleratorRead); | ||||
|       acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]); | ||||
|     } | ||||
|     Aview *Aview_p = & AcceleratorViewContainer[0]; | ||||
|  | ||||
|     autoView( out_v , out, AcceleratorWrite); | ||||
|     autoView( in_v  , in, AcceleratorRead); | ||||
|     autoView( Stencil_v  , Stencil, AcceleratorRead); | ||||
|  | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|     typedef decltype(coalescedRead(in_v[0])) calcVector; | ||||
|     typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
|  | ||||
|     accelerator_for(sss, Grid()->oSites()*nbasis, Nsimd, { | ||||
|       int ss = sss/nbasis; | ||||
|       int b  = sss%nbasis; | ||||
|       calcComplex res = Zero(); | ||||
|       calcVector nbr; | ||||
|       int ptype; | ||||
|       StencilEntry *SE; | ||||
|  | ||||
|       SE=Stencil_v.GetEntry(ptype,point,ss); | ||||
| 	   | ||||
|       if(SE->_is_local) {  | ||||
| 	nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
|       } else { | ||||
| 	nbr = coalescedRead(Stencil_v.CommBuf()[SE->_offset]); | ||||
|       } | ||||
|       acceleratorSynchronise(); | ||||
|  | ||||
|       for(int bb=0;bb<nbasis;bb++) { | ||||
| 	res = res + coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb); | ||||
|       } | ||||
|       coalescedWrite(out_v[ss](b),res); | ||||
|     }); | ||||
|     for(int p=0;p<geom.npoint;p++) hAcceleratorViewContainer[p].ViewClose(); | ||||
|   } | ||||
|   void MdirAll(const CoarseVector &in,std::vector<CoarseVector> &out) | ||||
|   { | ||||
|     this->MdirComms(in); | ||||
|     int ndir=geom.npoint-1; | ||||
|     if ((out.size()!=ndir)&&(out.size()!=ndir+1)) {  | ||||
|       std::cout <<"MdirAll out size "<< out.size()<<std::endl; | ||||
|       std::cout <<"MdirAll ndir "<< ndir<<std::endl; | ||||
|       assert(0); | ||||
|     } | ||||
|     for(int p=0;p<ndir;p++){ | ||||
|       MdirCalc(in,out[p],p); | ||||
|     } | ||||
|   }; | ||||
|   void Mdir(const CoarseVector &in, CoarseVector &out, int dir, int disp){ | ||||
|  | ||||
|     this->MdirComms(in); | ||||
|  | ||||
|     MdirCalc(in,out,geom.point(dir,disp)); | ||||
|   }; | ||||
|  | ||||
|   void Mdiag(const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     int point=geom.npoint-1; | ||||
|     MdirCalc(in, out, point); // No comms | ||||
|   }; | ||||
|  | ||||
|   void Mooee(const CoarseVector &in, CoarseVector &out) { | ||||
|     MooeeInternal(in, out, DaggerNo, InverseNo); | ||||
|   } | ||||
|  | ||||
|   void MooeeInv(const CoarseVector &in, CoarseVector &out) { | ||||
|     MooeeInternal(in, out, DaggerNo, InverseYes); | ||||
|   } | ||||
|  | ||||
|   void MooeeDag(const CoarseVector &in, CoarseVector &out) { | ||||
|     MooeeInternal(in, out, DaggerYes, InverseNo); | ||||
|   } | ||||
|  | ||||
|   void MooeeInvDag(const CoarseVector &in, CoarseVector &out) { | ||||
|     MooeeInternal(in, out, DaggerYes, InverseYes); | ||||
|   } | ||||
|  | ||||
|   void Meooe(const CoarseVector &in, CoarseVector &out) { | ||||
|     if(in.Checkerboard() == Odd) { | ||||
|       DhopEO(in, out, DaggerNo); | ||||
|     } else { | ||||
|       DhopOE(in, out, DaggerNo); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   void MeooeDag(const CoarseVector &in, CoarseVector &out) { | ||||
|     if(in.Checkerboard() == Odd) { | ||||
|       DhopEO(in, out, DaggerYes); | ||||
|     } else { | ||||
|       DhopOE(in, out, DaggerYes); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   void Dhop(const CoarseVector &in, CoarseVector &out, int dag) { | ||||
|     conformable(in.Grid(), _grid); // verifies full grid | ||||
|     conformable(in.Grid(), out.Grid()); | ||||
|  | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|  | ||||
|     DhopInternal(Stencil, A, in, out, dag); | ||||
|   } | ||||
|  | ||||
|   void DhopOE(const CoarseVector &in, CoarseVector &out, int dag) { | ||||
|     conformable(in.Grid(), _cbgrid);    // verifies half grid | ||||
|     conformable(in.Grid(), out.Grid()); // drops the cb check | ||||
|  | ||||
|     assert(in.Checkerboard() == Even); | ||||
|     out.Checkerboard() = Odd; | ||||
|  | ||||
|     DhopInternal(StencilEven, Aodd, in, out, dag); | ||||
|   } | ||||
|  | ||||
|   void DhopEO(const CoarseVector &in, CoarseVector &out, int dag) { | ||||
|     conformable(in.Grid(), _cbgrid);    // verifies half grid | ||||
|     conformable(in.Grid(), out.Grid()); // drops the cb check | ||||
|  | ||||
|     assert(in.Checkerboard() == Odd); | ||||
|     out.Checkerboard() = Even; | ||||
|  | ||||
|     DhopInternal(StencilOdd, Aeven, in, out, dag); | ||||
|   } | ||||
|  | ||||
|   void MooeeInternal(const CoarseVector &in, CoarseVector &out, int dag, int inv) { | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|     assert(in.Checkerboard() == Odd || in.Checkerboard() == Even); | ||||
|  | ||||
|     CoarseMatrix *Aself = nullptr; | ||||
|     if(in.Grid()->_isCheckerBoarded) { | ||||
|       if(in.Checkerboard() == Odd) { | ||||
|         Aself = (inv) ? &AselfInvOdd : &Aodd[geom.npoint-1]; | ||||
|         DselfInternal(StencilOdd, *Aself, in, out, dag); | ||||
|       } else { | ||||
|         Aself = (inv) ? &AselfInvEven : &Aeven[geom.npoint-1]; | ||||
|         DselfInternal(StencilEven, *Aself, in, out, dag); | ||||
|       } | ||||
|     } else { | ||||
|       Aself = (inv) ? &AselfInv : &A[geom.npoint-1]; | ||||
|       DselfInternal(Stencil, *Aself, in, out, dag); | ||||
|     } | ||||
|     assert(Aself != nullptr); | ||||
|   } | ||||
|  | ||||
|   void DselfInternal(CartesianStencil<siteVector,siteVector,DefaultImplParams> &st, CoarseMatrix &a, | ||||
|                        const CoarseVector &in, CoarseVector &out, int dag) { | ||||
|     int point = geom.npoint-1; | ||||
|     autoView( out_v, out, AcceleratorWrite); | ||||
|     autoView( in_v,  in,  AcceleratorRead); | ||||
|     autoView( st_v,  st,  AcceleratorRead); | ||||
|     autoView( a_v,   a,   AcceleratorRead); | ||||
|  | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|     typedef decltype(coalescedRead(in_v[0])) calcVector; | ||||
|     typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
|  | ||||
|     RealD* dag_factor_p = &dag_factor[0]; | ||||
|  | ||||
|     if(dag) { | ||||
|       accelerator_for(sss, in.Grid()->oSites()*nbasis, Nsimd, { | ||||
|         int ss = sss/nbasis; | ||||
|         int b  = sss%nbasis; | ||||
|         calcComplex res = Zero(); | ||||
|         calcVector nbr; | ||||
|         int ptype; | ||||
|         StencilEntry *SE; | ||||
|  | ||||
|         SE=st_v.GetEntry(ptype,point,ss); | ||||
|  | ||||
|         if(SE->_is_local) { | ||||
|           nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
|         } else { | ||||
|           nbr = coalescedRead(st_v.CommBuf()[SE->_offset]); | ||||
|         } | ||||
|         acceleratorSynchronise(); | ||||
|  | ||||
|         for(int bb=0;bb<nbasis;bb++) { | ||||
|           res = res + dag_factor_p[b*nbasis+bb]*coalescedRead(a_v[ss](b,bb))*nbr(bb); | ||||
|         } | ||||
|         coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|     } else { | ||||
|       accelerator_for(sss, in.Grid()->oSites()*nbasis, Nsimd, { | ||||
|         int ss = sss/nbasis; | ||||
|         int b  = sss%nbasis; | ||||
|         calcComplex res = Zero(); | ||||
|         calcVector nbr; | ||||
|         int ptype; | ||||
|         StencilEntry *SE; | ||||
|  | ||||
|         SE=st_v.GetEntry(ptype,point,ss); | ||||
|  | ||||
|         if(SE->_is_local) { | ||||
|           nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
|         } else { | ||||
|           nbr = coalescedRead(st_v.CommBuf()[SE->_offset]); | ||||
|         } | ||||
|         acceleratorSynchronise(); | ||||
|  | ||||
|         for(int bb=0;bb<nbasis;bb++) { | ||||
|           res = res + coalescedRead(a_v[ss](b,bb))*nbr(bb); | ||||
|         } | ||||
|         coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   void DhopInternal(CartesianStencil<siteVector,siteVector,DefaultImplParams> &st, std::vector<CoarseMatrix> &a, | ||||
|                     const CoarseVector &in, CoarseVector &out, int dag) { | ||||
|     SimpleCompressor<siteVector> compressor; | ||||
|  | ||||
|     st.HaloExchange(in,compressor); | ||||
|     autoView( in_v,  in,  AcceleratorRead); | ||||
|     autoView( out_v, out, AcceleratorWrite); | ||||
|     autoView( st_v , st,  AcceleratorRead); | ||||
|     typedef LatticeView<Cobj> Aview; | ||||
|  | ||||
|     // determine in what order we need the points | ||||
|     int npoint = geom.npoint-1; | ||||
|     deviceVector<int> points(npoint); | ||||
|     for(int p=0; p<npoint; p++) { | ||||
|       int val = (dag && !hermitian) ? geom.points_dagger[p] : p; | ||||
|       acceleratorPut(points[p], val); | ||||
|     } | ||||
|     auto points_p = &points[0]; | ||||
|  | ||||
|     deviceVector<Aview> AcceleratorViewContainer(geom.npoint); | ||||
|     hostVector<Aview>   hAcceleratorViewContainer(geom.npoint); | ||||
|    | ||||
|     for(int p=0;p<geom.npoint;p++) { | ||||
|       hAcceleratorViewContainer[p] = a[p].View(AcceleratorRead); | ||||
|       acceleratorPut(AcceleratorViewContainer[p],hAcceleratorViewContainer[p]); | ||||
|     } | ||||
|     Aview *Aview_p = & AcceleratorViewContainer[0]; | ||||
|  | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|     typedef decltype(coalescedRead(in_v[0])) calcVector; | ||||
|     typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
|  | ||||
|     RealD* dag_factor_p = &dag_factor[0]; | ||||
|  | ||||
|     if(dag) { | ||||
|       accelerator_for(sss, in.Grid()->oSites()*nbasis, Nsimd, { | ||||
|         int ss = sss/nbasis; | ||||
|         int b  = sss%nbasis; | ||||
|         calcComplex res = Zero(); | ||||
|         calcVector nbr; | ||||
|         int ptype; | ||||
|         StencilEntry *SE; | ||||
|  | ||||
|         for(int p=0;p<npoint;p++){ | ||||
|           int point = points_p[p]; | ||||
|           SE=st_v.GetEntry(ptype,point,ss); | ||||
|  | ||||
|           if(SE->_is_local) { | ||||
|             nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
|           } else { | ||||
|             nbr = coalescedRead(st_v.CommBuf()[SE->_offset]); | ||||
|           } | ||||
|           acceleratorSynchronise(); | ||||
|  | ||||
|           for(int bb=0;bb<nbasis;bb++) { | ||||
|             res = res + dag_factor_p[b*nbasis+bb]*coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb); | ||||
|           } | ||||
|         } | ||||
|         coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|     } else { | ||||
|       accelerator_for(sss, in.Grid()->oSites()*nbasis, Nsimd, { | ||||
|         int ss = sss/nbasis; | ||||
|         int b  = sss%nbasis; | ||||
|         calcComplex res = Zero(); | ||||
|         calcVector nbr; | ||||
|         int ptype; | ||||
|         StencilEntry *SE; | ||||
|  | ||||
|         for(int p=0;p<npoint;p++){ | ||||
|           int point = points_p[p]; | ||||
|           SE=st_v.GetEntry(ptype,point,ss); | ||||
|  | ||||
|           if(SE->_is_local) { | ||||
|             nbr = coalescedReadPermute(in_v[SE->_offset],ptype,SE->_permute); | ||||
|           } else { | ||||
|             nbr = coalescedRead(st_v.CommBuf()[SE->_offset]); | ||||
|           } | ||||
|           acceleratorSynchronise(); | ||||
|  | ||||
|           for(int bb=0;bb<nbasis;bb++) { | ||||
|             res = res + coalescedRead(Aview_p[point][ss](b,bb))*nbr(bb); | ||||
|           } | ||||
|         } | ||||
|         coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|     } | ||||
|  | ||||
|     for(int p=0;p<npoint;p++) hAcceleratorViewContainer[p].ViewClose(); | ||||
|   } | ||||
|    | ||||
|   CoarsenedMatrix(GridCartesian &CoarseGrid, int hermitian_=0) 	: | ||||
|     _grid(&CoarseGrid), | ||||
|     _cbgrid(new GridRedBlackCartesian(&CoarseGrid)), | ||||
|     geom(CoarseGrid._ndimension), | ||||
|     hermitian(hermitian_), | ||||
|     Stencil(&CoarseGrid,geom.npoint,Even,geom.directions,geom.displacements), | ||||
|     StencilEven(_cbgrid,geom.npoint,Even,geom.directions,geom.displacements), | ||||
|     StencilOdd(_cbgrid,geom.npoint,Odd,geom.directions,geom.displacements), | ||||
|     A(geom.npoint,&CoarseGrid), | ||||
|     Aeven(geom.npoint,_cbgrid), | ||||
|     Aodd(geom.npoint,_cbgrid), | ||||
|     AselfInv(&CoarseGrid), | ||||
|     AselfInvEven(_cbgrid), | ||||
|     AselfInvOdd(_cbgrid), | ||||
|     dag_factor(nbasis*nbasis) | ||||
|   { | ||||
|     fillFactor(); | ||||
|   }; | ||||
|  | ||||
|   CoarsenedMatrix(GridCartesian &CoarseGrid, GridRedBlackCartesian &CoarseRBGrid, int hermitian_=0) 	: | ||||
|  | ||||
|     _grid(&CoarseGrid), | ||||
|     _cbgrid(&CoarseRBGrid), | ||||
|     geom(CoarseGrid._ndimension), | ||||
|     hermitian(hermitian_), | ||||
|     Stencil(&CoarseGrid,geom.npoint,Even,geom.directions,geom.displacements), | ||||
|     StencilEven(&CoarseRBGrid,geom.npoint,Even,geom.directions,geom.displacements), | ||||
|     StencilOdd(&CoarseRBGrid,geom.npoint,Odd,geom.directions,geom.displacements), | ||||
|     A(geom.npoint,&CoarseGrid), | ||||
|     Aeven(geom.npoint,&CoarseRBGrid), | ||||
|     Aodd(geom.npoint,&CoarseRBGrid), | ||||
|     AselfInv(&CoarseGrid), | ||||
|     AselfInvEven(&CoarseRBGrid), | ||||
|     AselfInvOdd(&CoarseRBGrid), | ||||
|     dag_factor(nbasis*nbasis) | ||||
|   { | ||||
|     fillFactor(); | ||||
|   }; | ||||
|  | ||||
|   void fillFactor() { | ||||
|     Eigen::MatrixXd dag_factor_eigen = Eigen::MatrixXd::Ones(nbasis, nbasis); | ||||
|     if(!hermitian) { | ||||
|       const int nb = nbasis/2; | ||||
|       dag_factor_eigen.block(0,nb,nb,nb) *= -1.0; | ||||
|       dag_factor_eigen.block(nb,0,nb,nb) *= -1.0; | ||||
|     } | ||||
|  | ||||
|     // GPU readable prefactor | ||||
|     std::vector<RealD> h_dag_factor(nbasis*nbasis); | ||||
|     thread_for(i, nbasis*nbasis, { | ||||
|       int j = i/nbasis; | ||||
|       int k = i%nbasis; | ||||
|       h_dag_factor[i] = dag_factor_eigen(j, k); | ||||
|     }); | ||||
|     acceleratorCopyToDevice(&h_dag_factor[0],&dag_factor[0],dag_factor.size()*sizeof(RealD)); | ||||
|   } | ||||
|  | ||||
|   void CoarsenOperator(GridBase *FineGrid,LinearOperatorBase<Lattice<Fobj> > &linop, | ||||
| 		       Aggregation<Fobj,CComplex,nbasis> & Subspace) | ||||
|   { | ||||
|     typedef Lattice<typename Fobj::tensor_reduced> FineComplexField; | ||||
|     typedef typename Fobj::scalar_type scalar_type; | ||||
|  | ||||
|     std::cout << GridLogMessage<< "CoarsenMatrix "<< std::endl; | ||||
|  | ||||
|     FineComplexField one(FineGrid); one=scalar_type(1.0,0.0); | ||||
|     FineComplexField zero(FineGrid); zero=scalar_type(0.0,0.0); | ||||
|  | ||||
|     std::vector<FineComplexField> masks(geom.npoint,FineGrid); | ||||
|     FineComplexField imask(FineGrid); // contributions from within this block | ||||
|     FineComplexField omask(FineGrid); // contributions from outwith this block | ||||
|  | ||||
|     FineComplexField evenmask(FineGrid); | ||||
|     FineComplexField oddmask(FineGrid);  | ||||
|  | ||||
|     FineField     phi(FineGrid); | ||||
|     FineField     tmp(FineGrid); | ||||
|     FineField     zz(FineGrid); zz=Zero(); | ||||
|     FineField    Mphi(FineGrid); | ||||
|     FineField    Mphie(FineGrid); | ||||
|     FineField    Mphio(FineGrid); | ||||
|     std::vector<FineField>     Mphi_p(geom.npoint,FineGrid); | ||||
|  | ||||
|     Lattice<iScalar<vInteger> > coor (FineGrid); | ||||
|     Lattice<iScalar<vInteger> > bcoor(FineGrid); | ||||
|     Lattice<iScalar<vInteger> > bcb  (FineGrid); bcb = Zero(); | ||||
|  | ||||
|     CoarseVector iProj(Grid());  | ||||
|     CoarseVector oProj(Grid());  | ||||
|     CoarseVector SelfProj(Grid());  | ||||
|     CoarseComplexField iZProj(Grid());  | ||||
|     CoarseComplexField oZProj(Grid());  | ||||
|  | ||||
|     CoarseScalar InnerProd(Grid());  | ||||
|  | ||||
|     std::cout << GridLogMessage<< "CoarsenMatrix Orthog "<< std::endl; | ||||
|     // Orthogonalise the subblocks over the basis | ||||
|     blockOrthogonalise(InnerProd,Subspace.subspace); | ||||
|  | ||||
|     // Compute the matrix elements of linop between this orthonormal | ||||
|     // set of vectors. | ||||
|     std::cout << GridLogMessage<< "CoarsenMatrix masks "<< std::endl; | ||||
|     int self_stencil=-1; | ||||
|     for(int p=0;p<geom.npoint;p++) | ||||
|     {  | ||||
|       int dir   = geom.directions[p]; | ||||
|       int disp  = geom.displacements[p]; | ||||
|       A[p]=Zero(); | ||||
|       if( geom.displacements[p]==0){ | ||||
| 	self_stencil=p; | ||||
|       } | ||||
|  | ||||
|       Integer block=(FineGrid->_rdimensions[dir])/(Grid()->_rdimensions[dir]); | ||||
|  | ||||
|       LatticeCoordinate(coor,dir); | ||||
|  | ||||
|       /////////////////////////////////////////////////////// | ||||
|       // Work out even and odd block checkerboarding for fast diagonal term | ||||
|       /////////////////////////////////////////////////////// | ||||
|       if ( disp==1 ) { | ||||
| 	bcb   = bcb + div(coor,block); | ||||
|       } | ||||
| 	 | ||||
|       if ( disp==0 ) { | ||||
| 	  masks[p]= Zero(); | ||||
|       } else if ( disp==1 ) { | ||||
| 	masks[p] = where(mod(coor,block)==(block-1),one,zero); | ||||
|       } else if ( disp==-1 ) { | ||||
| 	masks[p] = where(mod(coor,block)==(Integer)0,one,zero); | ||||
|       } | ||||
|     } | ||||
|     evenmask = where(mod(bcb,2)==(Integer)0,one,zero); | ||||
|     oddmask  = one-evenmask; | ||||
|  | ||||
|     assert(self_stencil!=-1); | ||||
|  | ||||
|     for(int i=0;i<nbasis;i++){ | ||||
|  | ||||
|       phi=Subspace.subspace[i]; | ||||
|  | ||||
|       std::cout << GridLogMessage<< "CoarsenMatrix vector "<<i << std::endl; | ||||
|       linop.OpDirAll(phi,Mphi_p); | ||||
|       linop.OpDiag  (phi,Mphi_p[geom.npoint-1]); | ||||
|  | ||||
|       for(int p=0;p<geom.npoint;p++){  | ||||
|  | ||||
| 	Mphi = Mphi_p[p]; | ||||
|  | ||||
| 	int dir   = geom.directions[p]; | ||||
| 	int disp  = geom.displacements[p]; | ||||
|  | ||||
| 	if ( (disp==-1) || (!hermitian ) ) { | ||||
|  | ||||
| 	  //////////////////////////////////////////////////////////////////////// | ||||
| 	  // Pick out contributions coming from this cell and neighbour cell | ||||
| 	  //////////////////////////////////////////////////////////////////////// | ||||
| 	  omask = masks[p]; | ||||
| 	  imask = one-omask; | ||||
| 	 | ||||
| 	  for(int j=0;j<nbasis;j++){ | ||||
| 	     | ||||
| 	    blockMaskedInnerProduct(oZProj,omask,Subspace.subspace[j],Mphi); | ||||
| 	     | ||||
| 	    autoView( iZProj_v , iZProj, AcceleratorRead) ; | ||||
| 	    autoView( oZProj_v , oZProj, AcceleratorRead) ; | ||||
| 	    autoView( A_p     ,  A[p], AcceleratorWrite); | ||||
| 	    autoView( A_self  , A[self_stencil], AcceleratorWrite); | ||||
|  | ||||
| 	    accelerator_for(ss, Grid()->oSites(), Fobj::Nsimd(),{ coalescedWrite(A_p[ss](j,i),oZProj_v(ss)); }); | ||||
| 	    if ( hermitian && (disp==-1) ) { | ||||
| 	      for(int pp=0;pp<geom.npoint;pp++){// Find the opposite link and set <j|A|i> = <i|A|j>* | ||||
| 		int dirp   = geom.directions[pp]; | ||||
| 		int dispp  = geom.displacements[pp]; | ||||
| 		if ( (dirp==dir) && (dispp==1) ){ | ||||
| 		  auto sft = conjugate(Cshift(oZProj,dir,1)); | ||||
| 		  autoView( sft_v    ,  sft  , AcceleratorWrite); | ||||
| 		  autoView( A_pp     ,  A[pp], AcceleratorWrite); | ||||
| 		  accelerator_for(ss, Grid()->oSites(), Fobj::Nsimd(),{ coalescedWrite(A_pp[ss](i,j),sft_v(ss)); }); | ||||
| 		} | ||||
| 	      } | ||||
| 	    } | ||||
|  | ||||
| 	  } | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       /////////////////////////////////////////// | ||||
|       // Faster alternate self coupling.. use hermiticity to save 2x | ||||
|       /////////////////////////////////////////// | ||||
|       { | ||||
| 	mult(tmp,phi,evenmask);  linop.Op(tmp,Mphie); | ||||
| 	mult(tmp,phi,oddmask );  linop.Op(tmp,Mphio); | ||||
|  | ||||
| 	{ | ||||
| 	  autoView( tmp_      , tmp, AcceleratorWrite); | ||||
| 	  autoView( evenmask_ , evenmask, AcceleratorRead); | ||||
| 	  autoView( oddmask_  ,  oddmask, AcceleratorRead); | ||||
| 	  autoView( Mphie_    ,  Mphie, AcceleratorRead); | ||||
| 	  autoView( Mphio_    ,  Mphio, AcceleratorRead); | ||||
| 	  accelerator_for(ss, FineGrid->oSites(), Fobj::Nsimd(),{  | ||||
| 	      coalescedWrite(tmp_[ss],evenmask_(ss)*Mphie_(ss) + oddmask_(ss)*Mphio_(ss)); | ||||
| 	    }); | ||||
| 	} | ||||
|  | ||||
| 	blockProject(SelfProj,tmp,Subspace.subspace); | ||||
|  | ||||
| 	autoView( SelfProj_ , SelfProj, AcceleratorRead); | ||||
| 	autoView( A_self  , A[self_stencil], AcceleratorWrite); | ||||
|  | ||||
| 	accelerator_for(ss, Grid()->oSites(), Fobj::Nsimd(),{ | ||||
| 	  for(int j=0;j<nbasis;j++){ | ||||
| 	    coalescedWrite(A_self[ss](j,i), SelfProj_(ss)(j)); | ||||
| 	  } | ||||
| 	}); | ||||
|  | ||||
|       } | ||||
|     } | ||||
|     if(hermitian) { | ||||
|       std::cout << GridLogMessage << " ForceHermitian, new code "<<std::endl; | ||||
|     } | ||||
|  | ||||
|     InvertSelfStencilLink(); std::cout << GridLogMessage << "Coarse self link inverted" << std::endl; | ||||
|     FillHalfCbs(); std::cout << GridLogMessage << "Coarse half checkerboards filled" << std::endl; | ||||
|   } | ||||
|  | ||||
|   void InvertSelfStencilLink() { | ||||
|     std::cout << GridLogDebug << "CoarsenedMatrix::InvertSelfStencilLink" << std::endl; | ||||
|     int localVolume = Grid()->lSites(); | ||||
|  | ||||
|     typedef typename Cobj::scalar_object scalar_object; | ||||
|  | ||||
|     autoView(Aself_v,    A[geom.npoint-1], CpuRead); | ||||
|     autoView(AselfInv_v, AselfInv,         CpuWrite); | ||||
|     thread_for(site, localVolume, { // NOTE: Not able to bring this to GPU because of Eigen + peek/poke | ||||
|       Eigen::MatrixXcd selfLinkEigen    = Eigen::MatrixXcd::Zero(nbasis, nbasis); | ||||
|       Eigen::MatrixXcd selfLinkInvEigen = Eigen::MatrixXcd::Zero(nbasis, nbasis); | ||||
|  | ||||
|       scalar_object selfLink    = Zero(); | ||||
|       scalar_object selfLinkInv = Zero(); | ||||
|  | ||||
|       Coordinate lcoor; | ||||
|  | ||||
|       Grid()->LocalIndexToLocalCoor(site, lcoor); | ||||
|       peekLocalSite(selfLink, Aself_v, lcoor); | ||||
|  | ||||
|       for (int i = 0; i < nbasis; ++i) | ||||
|         for (int j = 0; j < nbasis; ++j) | ||||
|           selfLinkEigen(i, j) = static_cast<ComplexD>(TensorRemove(selfLink(i, j))); | ||||
|  | ||||
|       selfLinkInvEigen = selfLinkEigen.inverse(); | ||||
|  | ||||
|       for(int i = 0; i < nbasis; ++i) | ||||
|         for(int j = 0; j < nbasis; ++j) | ||||
|           selfLinkInv(i, j) = selfLinkInvEigen(i, j); | ||||
|  | ||||
|       pokeLocalSite(selfLinkInv, AselfInv_v, lcoor); | ||||
|     }); | ||||
|   } | ||||
|  | ||||
|   void FillHalfCbs() { | ||||
|     std::cout << GridLogDebug << "CoarsenedMatrix::FillHalfCbs" << std::endl; | ||||
|     for(int p = 0; p < geom.npoint; ++p) { | ||||
|       pickCheckerboard(Even, Aeven[p], A[p]); | ||||
|       pickCheckerboard(Odd, Aodd[p], A[p]); | ||||
|     } | ||||
|     pickCheckerboard(Even, AselfInvEven, AselfInv); | ||||
|     pickCheckerboard(Odd, AselfInvOdd, AselfInv); | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
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								Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
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								Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h
									
									
									
									
									
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							| @@ -0,0 +1,619 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/GeneralCoarsenedMatrix.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| #include <Grid/qcd/QCD.h> // needed for Dagger(Yes|No), Inverse(Yes|No) | ||||
|  | ||||
| #include <Grid/lattice/PaddedCell.h> | ||||
| #include <Grid/stencil/GeneralLocalStencil.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Fine Object == (per site) type of fine field | ||||
| // nbasis      == number of deflation vectors | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class GeneralCoarsenedMatrix : public SparseMatrixBase<Lattice<iVector<CComplex,nbasis > > >  { | ||||
| public: | ||||
|  | ||||
|   typedef GeneralCoarsenedMatrix<Fobj,CComplex,nbasis> GeneralCoarseOp; | ||||
|   typedef iVector<CComplex,nbasis >           siteVector; | ||||
|   typedef iMatrix<CComplex,nbasis >           siteMatrix; | ||||
|   typedef Lattice<iScalar<CComplex> >         CoarseComplexField; | ||||
|   typedef Lattice<siteVector>                 CoarseVector; | ||||
|   typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix; | ||||
|   typedef iMatrix<CComplex,nbasis >  Cobj; | ||||
|   typedef iVector<CComplex,nbasis >  Cvec; | ||||
|   typedef Lattice< CComplex >   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj >        FineField; | ||||
|   typedef Lattice<CComplex >    FineComplexField; | ||||
|   typedef CoarseVector Field; | ||||
|   //////////////////// | ||||
|   // Data members | ||||
|   //////////////////// | ||||
|   int hermitian; | ||||
|   GridBase      *       _FineGrid;  | ||||
|   GridCartesian *       _CoarseGrid;  | ||||
|   NonLocalStencilGeometry &geom; | ||||
|   PaddedCell Cell; | ||||
|   GeneralLocalStencil Stencil; | ||||
|    | ||||
|   std::vector<CoarseMatrix> _A; | ||||
|   std::vector<CoarseMatrix> _Adag; | ||||
|   std::vector<CoarseVector> MultTemporaries; | ||||
|  | ||||
|   /////////////////////// | ||||
|   // Interface | ||||
|   /////////////////////// | ||||
|   GridBase      * Grid(void)           { return _CoarseGrid; };   // this is all the linalg routines need to know | ||||
|   GridBase      * FineGrid(void)       { return _FineGrid; };   // this is all the linalg routines need to know | ||||
|   GridCartesian * CoarseGrid(void)     { return _CoarseGrid; };   // this is all the linalg routines need to know | ||||
|  | ||||
|   /*  void ShiftMatrix(RealD shift) | ||||
|   { | ||||
|     int Nd=_FineGrid->Nd();  | ||||
|     Coordinate zero_shift(Nd,0); | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       if ( zero_shift==geom.shifts[p] ) { | ||||
| 	_A[p] = _A[p]+shift; | ||||
| 	//	_Adag[p] = _Adag[p]+shift; | ||||
|       } | ||||
|     }     | ||||
|   } | ||||
|   void ProjectNearestNeighbour(RealD shift, GeneralCoarseOp &CopyMe) | ||||
|   { | ||||
|     int nfound=0; | ||||
|     std::cout << GridLogMessage <<"GeneralCoarsenedMatrix::ProjectNearestNeighbour "<< CopyMe._A[0].Grid()<<std::endl; | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       for(int pp=0;pp<CopyMe.geom.npoint;pp++){ | ||||
|  	// Search for the same relative shift | ||||
| 	// Avoids brutal handling of Grid pointers | ||||
| 	if ( CopyMe.geom.shifts[pp]==geom.shifts[p] ) { | ||||
| 	  _A[p] = CopyMe.Cell.Extract(CopyMe._A[pp]); | ||||
| 	  //	  _Adag[p] = CopyMe.Cell.Extract(CopyMe._Adag[pp]); | ||||
| 	  nfound++; | ||||
| 	} | ||||
|       } | ||||
|     } | ||||
|     assert(nfound==geom.npoint); | ||||
|     ExchangeCoarseLinks(); | ||||
|   } | ||||
|   */ | ||||
|    | ||||
|   GeneralCoarsenedMatrix(NonLocalStencilGeometry &_geom,GridBase *FineGrid, GridCartesian * CoarseGrid) | ||||
|     : geom(_geom), | ||||
|       _FineGrid(FineGrid), | ||||
|       _CoarseGrid(CoarseGrid), | ||||
|       hermitian(1), | ||||
|       Cell(_geom.Depth(),_CoarseGrid), | ||||
|       Stencil(Cell.grids.back(),geom.shifts) | ||||
|   { | ||||
|     { | ||||
|       int npoint = _geom.npoint; | ||||
|     } | ||||
|     _A.resize(geom.npoint,CoarseGrid); | ||||
|     //    _Adag.resize(geom.npoint,CoarseGrid); | ||||
|   } | ||||
|   void M (const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     Mult(_A,in,out); | ||||
|   } | ||||
|   void Mdag (const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     assert(hermitian); | ||||
|     Mult(_A,in,out); | ||||
|     //    if ( hermitian ) M(in,out); | ||||
|     //    else Mult(_Adag,in,out); | ||||
|   } | ||||
|   void Mult (std::vector<CoarseMatrix> &A,const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     RealD tviews=0;    RealD ttot=0;    RealD tmult=0;   RealD texch=0;    RealD text=0; RealD ttemps=0; RealD tcopy=0; | ||||
|     RealD tmult2=0; | ||||
|  | ||||
|     ttot=-usecond(); | ||||
|     conformable(CoarseGrid(),in.Grid()); | ||||
|     conformable(in.Grid(),out.Grid()); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|     CoarseVector tin=in; | ||||
|  | ||||
|     texch-=usecond(); | ||||
|     CoarseVector pin = Cell.ExchangePeriodic(tin); | ||||
|     texch+=usecond(); | ||||
|  | ||||
|     CoarseVector pout(pin.Grid()); | ||||
|  | ||||
|     int npoint = geom.npoint; | ||||
|     typedef LatticeView<Cobj> Aview; | ||||
|     typedef LatticeView<Cvec> Vview; | ||||
|        | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|      | ||||
|     int64_t osites=pin.Grid()->oSites(); | ||||
|  | ||||
|     RealD flops = 1.0* npoint * nbasis * nbasis * 8.0 * osites * CComplex::Nsimd(); | ||||
|     RealD bytes = 1.0*osites*sizeof(siteMatrix)*npoint | ||||
|                 + 2.0*osites*sizeof(siteVector)*npoint; | ||||
|        | ||||
|     { | ||||
|       tviews-=usecond(); | ||||
|       autoView( in_v , pin, AcceleratorRead); | ||||
|       autoView( out_v , pout, AcceleratorWriteDiscard); | ||||
|       autoView( Stencil_v  , Stencil, AcceleratorRead); | ||||
|       tviews+=usecond(); | ||||
|  | ||||
|       // Static and prereserve to keep UVM region live and not resized across multiple calls | ||||
|       ttemps-=usecond(); | ||||
|       MultTemporaries.resize(npoint,pin.Grid());        | ||||
|       ttemps+=usecond(); | ||||
|       std::vector<Aview> AcceleratorViewContainer_h; | ||||
|       std::vector<Vview> AcceleratorVecViewContainer_h;  | ||||
|  | ||||
|       tviews-=usecond(); | ||||
|       for(int p=0;p<npoint;p++) { | ||||
| 	AcceleratorViewContainer_h.push_back(      A[p].View(AcceleratorRead)); | ||||
| 	AcceleratorVecViewContainer_h.push_back(MultTemporaries[p].View(AcceleratorWrite)); | ||||
|       } | ||||
|       tviews+=usecond(); | ||||
|  | ||||
|       static deviceVector<Aview> AcceleratorViewContainer; AcceleratorViewContainer.resize(npoint); | ||||
|       static deviceVector<Vview> AcceleratorVecViewContainer; AcceleratorVecViewContainer.resize(npoint);  | ||||
|        | ||||
|       auto Aview_p = &AcceleratorViewContainer[0]; | ||||
|       auto Vview_p = &AcceleratorVecViewContainer[0]; | ||||
|       tcopy-=usecond(); | ||||
|       acceleratorCopyToDevice(&AcceleratorViewContainer_h[0],&AcceleratorViewContainer[0],npoint *sizeof(Aview)); | ||||
|       acceleratorCopyToDevice(&AcceleratorVecViewContainer_h[0],&AcceleratorVecViewContainer[0],npoint *sizeof(Vview)); | ||||
|       tcopy+=usecond(); | ||||
|  | ||||
|       tmult-=usecond(); | ||||
|       accelerator_for(spb, osites*nbasis*npoint, Nsimd, { | ||||
| 	  typedef decltype(coalescedRead(in_v[0](0))) calcComplex; | ||||
| 	  int32_t ss   = spb/(nbasis*npoint); | ||||
| 	  int32_t bp   = spb%(nbasis*npoint); | ||||
| 	  int32_t point= bp/nbasis; | ||||
| 	  int32_t b    = bp%nbasis; | ||||
| 	  auto SE  = Stencil_v.GetEntry(point,ss); | ||||
| 	  auto nbr = coalescedReadGeneralPermute(in_v[SE->_offset],SE->_permute,Nd); | ||||
| 	  auto res = coalescedRead(Aview_p[point][ss](0,b))*nbr(0); | ||||
| 	  for(int bb=1;bb<nbasis;bb++) { | ||||
| 	    res = res + coalescedRead(Aview_p[point][ss](bb,b))*nbr(bb); | ||||
| 	  } | ||||
| 	  coalescedWrite(Vview_p[point][ss](b),res); | ||||
|       }); | ||||
|       tmult2-=usecond(); | ||||
|       accelerator_for(sb, osites*nbasis, Nsimd, { | ||||
| 	  int ss = sb/nbasis; | ||||
| 	  int b  = sb%nbasis; | ||||
| 	  auto res = coalescedRead(Vview_p[0][ss](b)); | ||||
| 	  for(int point=1;point<npoint;point++){ | ||||
| 	    res = res + coalescedRead(Vview_p[point][ss](b)); | ||||
| 	  } | ||||
| 	  coalescedWrite(out_v[ss](b),res); | ||||
|       }); | ||||
|       tmult2+=usecond(); | ||||
|       tmult+=usecond(); | ||||
|       for(int p=0;p<npoint;p++) { | ||||
| 	AcceleratorViewContainer_h[p].ViewClose(); | ||||
| 	AcceleratorVecViewContainer_h[p].ViewClose(); | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     text-=usecond(); | ||||
|     out = Cell.Extract(pout); | ||||
|     text+=usecond(); | ||||
|     ttot+=usecond(); | ||||
|      | ||||
|     std::cout << GridLogPerformance<<"Coarse 1rhs Mult Aviews "<<tviews<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult exch "<<texch<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult mult "<<tmult<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<" of which mult2  "<<tmult2<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult ext  "<<text<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult temps "<<ttemps<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult copy  "<<tcopy<<" us"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Mult tot  "<<ttot<<" us"<<std::endl; | ||||
|     //    std::cout << GridLogPerformance<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Kernel flops "<< flops<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Kernel flop/s "<< flops/tmult<<" mflop/s"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse Kernel bytes/s "<< bytes/tmult<<" MB/s"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse overall flops/s "<< flops/ttot<<" mflop/s"<<std::endl; | ||||
|     std::cout << GridLogPerformance<<"Coarse total bytes   "<< bytes/1e6<<" MB"<<std::endl; | ||||
|  | ||||
|   }; | ||||
|    | ||||
|   void PopulateAdag(void) | ||||
|   { | ||||
|     for(int64_t bidx=0;bidx<CoarseGrid()->gSites() ;bidx++){ | ||||
|       Coordinate bcoor; | ||||
|       CoarseGrid()->GlobalIndexToGlobalCoor(bidx,bcoor); | ||||
|        | ||||
|       for(int p=0;p<geom.npoint;p++){ | ||||
| 	Coordinate scoor = bcoor; | ||||
| 	for(int mu=0;mu<bcoor.size();mu++){ | ||||
| 	  int L = CoarseGrid()->GlobalDimensions()[mu]; | ||||
| 	  scoor[mu] = (bcoor[mu] - geom.shifts[p][mu] + L) % L; // Modulo arithmetic | ||||
| 	} | ||||
| 	// Flip to poke/peekLocalSite and not too bad | ||||
| 	auto link = peekSite(_A[p],scoor); | ||||
| 	int pp = geom.Reverse(p); | ||||
| 	pokeSite(adj(link),_Adag[pp],bcoor); | ||||
|       } | ||||
|     } | ||||
|   } | ||||
|   ///////////////////////////////////////////////////////////// | ||||
|   //  | ||||
|   // A) Only reduced flops option is to use a padded cell of depth 4 | ||||
|   // and apply MpcDagMpc in the padded cell. | ||||
|   // | ||||
|   // Makes for ONE application of MpcDagMpc per vector instead of 30 or 80. | ||||
|   // With the effective cell size around (B+8)^4 perhaps 12^4/4^4 ratio | ||||
|   // Cost is 81x more, same as stencil size. | ||||
|   // | ||||
|   // But: can eliminate comms and do as local dirichlet. | ||||
|   // | ||||
|   // Local exchange gauge field once. | ||||
|   // Apply to all vectors, local only computation. | ||||
|   // Must exchange ghost subcells in reverse process of PaddedCell to take inner products | ||||
|   // | ||||
|   // B) Can reduce cost: pad by 1, apply Deo      (4^4+6^4+8^4+8^4 )/ (4x 4^4) | ||||
|   //                     pad by 2, apply Doe | ||||
|   //                     pad by 3, apply Deo | ||||
|   //                     then break out 8x directions; cost is ~10x MpcDagMpc per vector | ||||
|   // | ||||
|   // => almost factor of 10 in setup cost, excluding data rearrangement | ||||
|   // | ||||
|   // Intermediates -- ignore the corner terms, leave approximate and force Hermitian | ||||
|   // Intermediates -- pad by 2 and apply 1+8+24 = 33 times. | ||||
|   ///////////////////////////////////////////////////////////// | ||||
|  | ||||
|     ////////////////////////////////////////////////////////// | ||||
|     // BFM HDCG style approach: Solve a system of equations to get Aij | ||||
|     ////////////////////////////////////////////////////////// | ||||
|     /* | ||||
|      *     Here, k,l index which possible shift within the 3^Nd "ball" connected by MdagM. | ||||
|      * | ||||
|      *     conj(phases[block]) proj[k][ block*Nvec+j ] =  \sum_ball  e^{i q_k . delta} < phi_{block,j} | MdagM | phi_{(block+delta),i} >  | ||||
|      *                                                 =  \sum_ball e^{iqk.delta} A_ji | ||||
|      * | ||||
|      *     Must invert matrix M_k,l = e^[i q_k . delta_l] | ||||
|      * | ||||
|      *     Where q_k = delta_k . (2*M_PI/global_nb[mu]) | ||||
|      */ | ||||
| #if 0 | ||||
|   void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop, | ||||
| 		       Aggregation<Fobj,CComplex,nbasis> & Subspace) | ||||
|   { | ||||
|     std::cout << GridLogMessage<< "GeneralCoarsenMatrix "<< std::endl; | ||||
|     GridBase *grid = FineGrid(); | ||||
|  | ||||
|     RealD tproj=0.0; | ||||
|     RealD teigen=0.0; | ||||
|     RealD tmat=0.0; | ||||
|     RealD tphase=0.0; | ||||
|     RealD tinv=0.0; | ||||
|  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Orthogonalise the subblocks over the basis | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     CoarseScalar InnerProd(CoarseGrid());  | ||||
|     blockOrthogonalise(InnerProd,Subspace.subspace); | ||||
|  | ||||
|     const int npoint = geom.npoint; | ||||
|        | ||||
|     Coordinate clatt = CoarseGrid()->GlobalDimensions(); | ||||
|     int Nd = CoarseGrid()->Nd(); | ||||
|  | ||||
|       /* | ||||
|        *     Here, k,l index which possible momentum/shift within the N-points connected by MdagM. | ||||
|        *     Matrix index i is mapped to this shift via  | ||||
|        *               geom.shifts[i] | ||||
|        * | ||||
|        *     conj(pha[block]) proj[k (which mom)][j (basis vec cpt)][block]  | ||||
|        *       =  \sum_{l in ball}  e^{i q_k . delta_l} < phi_{block,j} | MdagM | phi_{(block+delta_l),i} >  | ||||
|        *       =  \sum_{l in ball} e^{iqk.delta_l} A_ji^{b.b+l} | ||||
|        *       = M_{kl} A_ji^{b.b+l} | ||||
|        * | ||||
|        *     Must assemble and invert matrix M_k,l = e^[i q_k . delta_l] | ||||
|        *   | ||||
|        *     Where q_k = delta_k . (2*M_PI/global_nb[mu]) | ||||
|        * | ||||
|        *     Then A{ji}^{b,b+l} = M^{-1}_{lm} ComputeProj_{m,b,i,j} | ||||
|        */ | ||||
|     teigen-=usecond(); | ||||
|     Eigen::MatrixXcd Mkl    = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     Eigen::MatrixXcd invMkl = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     ComplexD ci(0.0,1.0); | ||||
|     for(int k=0;k<npoint;k++){ // Loop over momenta | ||||
|  | ||||
|       for(int l=0;l<npoint;l++){ // Loop over nbr relative | ||||
| 	ComplexD phase(0.0,0.0); | ||||
| 	for(int mu=0;mu<Nd;mu++){ | ||||
| 	  RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	  phase=phase+TwoPiL*geom.shifts[k][mu]*geom.shifts[l][mu]; | ||||
| 	} | ||||
| 	phase=exp(phase*ci); | ||||
| 	Mkl(k,l) = phase; | ||||
|       } | ||||
|     } | ||||
|     invMkl = Mkl.inverse(); | ||||
|     teigen+=usecond(); | ||||
|  | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     // Now compute the matrix elements of linop between the orthonormal | ||||
|     // set of vectors. | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     FineField phaV(grid); // Phased block basis vector | ||||
|     FineField MphaV(grid);// Matrix applied | ||||
|     CoarseVector coarseInner(CoarseGrid()); | ||||
|  | ||||
|     std::vector<CoarseVector> ComputeProj(npoint,CoarseGrid()); | ||||
|     std::vector<CoarseVector>          FT(npoint,CoarseGrid()); | ||||
|     for(int i=0;i<nbasis;i++){// Loop over basis vectors | ||||
|       std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl; | ||||
|       for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
| 	///////////////////////////////////////////////////// | ||||
| 	// Stick a phase on every block | ||||
| 	///////////////////////////////////////////////////// | ||||
| 	tphase-=usecond(); | ||||
| 	CoarseComplexField coor(CoarseGrid()); | ||||
| 	CoarseComplexField pha(CoarseGrid());	pha=Zero(); | ||||
| 	for(int mu=0;mu<Nd;mu++){ | ||||
| 	  LatticeCoordinate(coor,mu); | ||||
| 	  RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	  pha = pha + (TwoPiL * geom.shifts[p][mu]) * coor; | ||||
| 	} | ||||
| 	pha  =exp(pha*ci); | ||||
| 	phaV=Zero(); | ||||
| 	blockZAXPY(phaV,pha,Subspace.subspace[i],phaV); | ||||
| 	tphase+=usecond(); | ||||
|  | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	// Multiple phased subspace vector by matrix and project to subspace | ||||
| 	// Remove local bulk phase to leave relative phases | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	tmat-=usecond(); | ||||
| 	linop.Op(phaV,MphaV); | ||||
| 	tmat+=usecond(); | ||||
|  | ||||
| 	tproj-=usecond(); | ||||
| 	blockProject(coarseInner,MphaV,Subspace.subspace); | ||||
| 	coarseInner = conjugate(pha) * coarseInner; | ||||
|  | ||||
| 	ComputeProj[p] = coarseInner; | ||||
| 	tproj+=usecond(); | ||||
|  | ||||
|       } | ||||
|  | ||||
|       tinv-=usecond(); | ||||
|       for(int k=0;k<npoint;k++){ | ||||
| 	FT[k] = Zero(); | ||||
| 	for(int l=0;l<npoint;l++){ | ||||
| 	  FT[k]= FT[k]+ invMkl(l,k)*ComputeProj[l]; | ||||
| 	} | ||||
|        | ||||
| 	int osites=CoarseGrid()->oSites(); | ||||
| 	autoView( A_v  , _A[k], AcceleratorWrite); | ||||
| 	autoView( FT_v  , FT[k], AcceleratorRead); | ||||
| 	accelerator_for(sss, osites, 1, { | ||||
| 	    for(int j=0;j<nbasis;j++){ | ||||
| 	      A_v[sss](i,j) = FT_v[sss](j); | ||||
| 	    } | ||||
|         }); | ||||
|       } | ||||
|       tinv+=usecond(); | ||||
|     } | ||||
|  | ||||
|     // Only needed if nonhermitian | ||||
|     if ( ! hermitian ) { | ||||
|       //      std::cout << GridLogMessage<<"PopulateAdag  "<<std::endl; | ||||
|       //      PopulateAdag(); | ||||
|     } | ||||
|  | ||||
|     // Need to write something to populate Adag from A | ||||
|     ExchangeCoarseLinks(); | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator eigen  "<<teigen<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator phase  "<<tphase<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator mat    "<<tmat <<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator proj   "<<tproj<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator inv    "<<tinv<<" us"<<std::endl; | ||||
|   } | ||||
| #else | ||||
|   void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop, | ||||
| 		       Aggregation<Fobj,CComplex,nbasis> & Subspace) | ||||
|   { | ||||
|     std::cout << GridLogMessage<< "GeneralCoarsenMatrix "<< std::endl; | ||||
|     GridBase *grid = FineGrid(); | ||||
|  | ||||
|     RealD tproj=0.0; | ||||
|     RealD teigen=0.0; | ||||
|     RealD tmat=0.0; | ||||
|     RealD tphase=0.0; | ||||
|     RealD tphaseBZ=0.0; | ||||
|     RealD tinv=0.0; | ||||
|  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Orthogonalise the subblocks over the basis | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     CoarseScalar InnerProd(CoarseGrid());  | ||||
|     blockOrthogonalise(InnerProd,Subspace.subspace); | ||||
|  | ||||
|     //    for(int s=0;s<Subspace.subspace.size();s++){ | ||||
|       //      std::cout << " subspace norm "<<norm2(Subspace.subspace[s])<<std::endl; | ||||
|     //    } | ||||
|     const int npoint = geom.npoint; | ||||
|        | ||||
|     Coordinate clatt = CoarseGrid()->GlobalDimensions(); | ||||
|     int Nd = CoarseGrid()->Nd(); | ||||
|  | ||||
|       /* | ||||
|        *     Here, k,l index which possible momentum/shift within the N-points connected by MdagM. | ||||
|        *     Matrix index i is mapped to this shift via  | ||||
|        *               geom.shifts[i] | ||||
|        * | ||||
|        *     conj(pha[block]) proj[k (which mom)][j (basis vec cpt)][block]  | ||||
|        *       =  \sum_{l in ball}  e^{i q_k . delta_l} < phi_{block,j} | MdagM | phi_{(block+delta_l),i} >  | ||||
|        *       =  \sum_{l in ball} e^{iqk.delta_l} A_ji^{b.b+l} | ||||
|        *       = M_{kl} A_ji^{b.b+l} | ||||
|        * | ||||
|        *     Must assemble and invert matrix M_k,l = e^[i q_k . delta_l] | ||||
|        *   | ||||
|        *     Where q_k = delta_k . (2*M_PI/global_nb[mu]) | ||||
|        * | ||||
|        *     Then A{ji}^{b,b+l} = M^{-1}_{lm} ComputeProj_{m,b,i,j} | ||||
|        */ | ||||
|     teigen-=usecond(); | ||||
|     Eigen::MatrixXcd Mkl    = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     Eigen::MatrixXcd invMkl = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     ComplexD ci(0.0,1.0); | ||||
|     for(int k=0;k<npoint;k++){ // Loop over momenta | ||||
|  | ||||
|       for(int l=0;l<npoint;l++){ // Loop over nbr relative | ||||
| 	ComplexD phase(0.0,0.0); | ||||
| 	for(int mu=0;mu<Nd;mu++){ | ||||
| 	  RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	  phase=phase+TwoPiL*geom.shifts[k][mu]*geom.shifts[l][mu]; | ||||
| 	} | ||||
| 	phase=exp(phase*ci); | ||||
| 	Mkl(k,l) = phase; | ||||
|       } | ||||
|     } | ||||
|     invMkl = Mkl.inverse(); | ||||
|     teigen+=usecond(); | ||||
|  | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     // Now compute the matrix elements of linop between the orthonormal | ||||
|     // set of vectors. | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     FineField phaV(grid); // Phased block basis vector | ||||
|     FineField MphaV(grid);// Matrix applied | ||||
|     std::vector<FineComplexField> phaF(npoint,grid); | ||||
|     std::vector<CoarseComplexField> pha(npoint,CoarseGrid()); | ||||
|      | ||||
|     CoarseVector coarseInner(CoarseGrid()); | ||||
|      | ||||
|     typedef typename CComplex::scalar_type SComplex; | ||||
|     FineComplexField one(grid); one=SComplex(1.0); | ||||
|     FineComplexField zz(grid); zz = Zero(); | ||||
|     tphase=-usecond(); | ||||
|     for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // Stick a phase on every block | ||||
|       ///////////////////////////////////////////////////// | ||||
|       CoarseComplexField coor(CoarseGrid()); | ||||
|       pha[p]=Zero(); | ||||
|       for(int mu=0;mu<Nd;mu++){ | ||||
| 	LatticeCoordinate(coor,mu); | ||||
| 	RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	pha[p] = pha[p] + (TwoPiL * geom.shifts[p][mu]) * coor; | ||||
|       } | ||||
|       pha[p]  =exp(pha[p]*ci); | ||||
|  | ||||
|       blockZAXPY(phaF[p],pha[p],one,zz); | ||||
|        | ||||
|     } | ||||
|     tphase+=usecond(); | ||||
|      | ||||
|     std::vector<CoarseVector> ComputeProj(npoint,CoarseGrid()); | ||||
|     std::vector<CoarseVector>          FT(npoint,CoarseGrid()); | ||||
|     for(int i=0;i<nbasis;i++){// Loop over basis vectors | ||||
|       std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl; | ||||
|       for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
| 	tphaseBZ-=usecond(); | ||||
| 	phaV = phaF[p]*Subspace.subspace[i]; | ||||
| 	tphaseBZ+=usecond(); | ||||
|  | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	// Multiple phased subspace vector by matrix and project to subspace | ||||
| 	// Remove local bulk phase to leave relative phases | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	tmat-=usecond(); | ||||
| 	linop.Op(phaV,MphaV); | ||||
| 	tmat+=usecond(); | ||||
| 	//	std::cout << i << " " <<p << " MphaV "<<norm2(MphaV)<<" "<<norm2(phaV)<<std::endl; | ||||
|  | ||||
| 	tproj-=usecond(); | ||||
| 	blockProject(coarseInner,MphaV,Subspace.subspace); | ||||
| 	coarseInner = conjugate(pha[p]) * coarseInner; | ||||
|  | ||||
| 	ComputeProj[p] = coarseInner; | ||||
| 	tproj+=usecond(); | ||||
| 	//	std::cout << i << " " <<p << " ComputeProj "<<norm2(ComputeProj[p])<<std::endl; | ||||
|  | ||||
|       } | ||||
|  | ||||
|       tinv-=usecond(); | ||||
|       for(int k=0;k<npoint;k++){ | ||||
| 	FT[k] = Zero(); | ||||
| 	for(int l=0;l<npoint;l++){ | ||||
| 	  FT[k]= FT[k]+ invMkl(l,k)*ComputeProj[l]; | ||||
| 	} | ||||
|        | ||||
| 	int osites=CoarseGrid()->oSites(); | ||||
| 	autoView( A_v  , _A[k], AcceleratorWrite); | ||||
| 	autoView( FT_v  , FT[k], AcceleratorRead); | ||||
| 	accelerator_for(sss, osites, 1, { | ||||
| 	    for(int j=0;j<nbasis;j++){ | ||||
| 	      A_v[sss](i,j) = FT_v[sss](j); | ||||
| 	    } | ||||
|         }); | ||||
|       } | ||||
|       tinv+=usecond(); | ||||
|     } | ||||
|  | ||||
|     // Only needed if nonhermitian | ||||
|     if ( ! hermitian ) { | ||||
|       //      std::cout << GridLogMessage<<"PopulateAdag  "<<std::endl; | ||||
|       //      PopulateAdag(); | ||||
|     } | ||||
|  | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       std::cout << " _A["<<p<<"] "<<norm2(_A[p])<<std::endl; | ||||
|     } | ||||
|  | ||||
|     // Need to write something to populate Adag from A | ||||
|     ExchangeCoarseLinks(); | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator eigen  "<<teigen<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator phase  "<<tphase<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator phaseBZ "<<tphaseBZ<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator mat    "<<tmat <<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator proj   "<<tproj<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator inv    "<<tinv<<" us"<<std::endl; | ||||
|   } | ||||
| #endif   | ||||
|   void ExchangeCoarseLinks(void){ | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       _A[p] = Cell.ExchangePeriodic(_A[p]); | ||||
|       //      _Adag[p]= Cell.ExchangePeriodic(_Adag[p]); | ||||
|     } | ||||
|   } | ||||
|   virtual  void Mdiag    (const Field &in, Field &out){ assert(0);}; | ||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp){assert(0);}; | ||||
|   virtual  void MdirAll  (const Field &in, std::vector<Field> &out){assert(0);}; | ||||
| }; | ||||
|  | ||||
|  | ||||
|    | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
										729
									
								
								Grid/algorithms/multigrid/GeneralCoarsenedMatrixMultiRHS.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										729
									
								
								Grid/algorithms/multigrid/GeneralCoarsenedMatrixMultiRHS.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,729 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/GeneralCoarsenedMatrixMultiRHS.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| // Fine Object == (per site) type of fine field | ||||
| // nbasis      == number of deflation vectors | ||||
| template<class Fobj,class CComplex,int nbasis> | ||||
| class MultiGeneralCoarsenedMatrix : public SparseMatrixBase<Lattice<iVector<CComplex,nbasis > > >  { | ||||
| public: | ||||
|   typedef typename CComplex::scalar_object SComplex; | ||||
|   typedef GeneralCoarsenedMatrix<Fobj,CComplex,nbasis> GeneralCoarseOp; | ||||
|   typedef MultiGeneralCoarsenedMatrix<Fobj,CComplex,nbasis> MultiGeneralCoarseOp; | ||||
|  | ||||
|   typedef iVector<CComplex,nbasis >           siteVector; | ||||
|   typedef iMatrix<CComplex,nbasis >           siteMatrix; | ||||
|   typedef iVector<SComplex,nbasis >           calcVector; | ||||
|   typedef iMatrix<SComplex,nbasis >           calcMatrix; | ||||
|   typedef Lattice<iScalar<CComplex> >         CoarseComplexField; | ||||
|   typedef Lattice<siteVector>                 CoarseVector; | ||||
|   typedef Lattice<iMatrix<CComplex,nbasis > > CoarseMatrix; | ||||
|   typedef iMatrix<CComplex,nbasis >  Cobj; | ||||
|   typedef iVector<CComplex,nbasis >  Cvec; | ||||
|   typedef Lattice< CComplex >   CoarseScalar; // used for inner products on fine field | ||||
|   typedef Lattice<Fobj >        FineField; | ||||
|   typedef Lattice<CComplex >    FineComplexField; | ||||
|   typedef CoarseVector Field; | ||||
|  | ||||
|   //////////////////// | ||||
|   // Data members | ||||
|   //////////////////// | ||||
|   GridCartesian *       _CoarseGridMulti;  | ||||
|   NonLocalStencilGeometry geom; | ||||
|   NonLocalStencilGeometry geom_srhs; | ||||
|   PaddedCell Cell; | ||||
|   GeneralLocalStencil Stencil; | ||||
|  | ||||
|   deviceVector<calcVector> BLAS_B; | ||||
|   deviceVector<calcVector> BLAS_C; | ||||
|   std::vector<deviceVector<calcMatrix> > BLAS_A; | ||||
|  | ||||
|   std::vector<deviceVector<ComplexD *> > BLAS_AP; | ||||
|   std::vector<deviceVector<ComplexD *> > BLAS_BP; | ||||
|   deviceVector<ComplexD *>               BLAS_CP; | ||||
|  | ||||
|   /////////////////////// | ||||
|   // Interface | ||||
|   /////////////////////// | ||||
|   GridBase      * Grid(void)           { return _CoarseGridMulti; };   // this is all the linalg routines need to know | ||||
|   GridCartesian * CoarseGrid(void)     { return _CoarseGridMulti; };   // this is all the linalg routines need to know | ||||
|  | ||||
|   // Can be used to do I/O on the operator matrices externally | ||||
|   void SetMatrix (int p,CoarseMatrix & A) | ||||
|   { | ||||
|     assert(A.size()==geom_srhs.npoint); | ||||
|     GridtoBLAS(A[p],BLAS_A[p]); | ||||
|   } | ||||
|   void GetMatrix (int p,CoarseMatrix & A) | ||||
|   { | ||||
|     assert(A.size()==geom_srhs.npoint); | ||||
|     BLAStoGrid(A[p],BLAS_A[p]); | ||||
|   } | ||||
|   void CopyMatrix (GeneralCoarseOp &_Op) | ||||
|   { | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       auto Aup = _Op.Cell.Extract(_Op._A[p]); | ||||
|       //Unpadded | ||||
|       GridtoBLAS(Aup,BLAS_A[p]); | ||||
|     } | ||||
|   } | ||||
|   /* | ||||
|   void CheckMatrix (GeneralCoarseOp &_Op) | ||||
|   { | ||||
|     std::cout <<"************* Checking the little direc operator mRHS"<<std::endl; | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       //Unpadded | ||||
|       auto Aup = _Op.Cell.Extract(_Op._A[p]); | ||||
|       auto Ack = Aup; | ||||
|       BLAStoGrid(Ack,BLAS_A[p]); | ||||
|       std::cout << p<<" Ack "<<norm2(Ack)<<std::endl; | ||||
|       std::cout << p<<" Aup "<<norm2(Aup)<<std::endl; | ||||
|     } | ||||
|     std::cout <<"************* "<<std::endl; | ||||
|   } | ||||
|   */ | ||||
|    | ||||
|   MultiGeneralCoarsenedMatrix(NonLocalStencilGeometry &_geom,GridCartesian *CoarseGridMulti) : | ||||
|     _CoarseGridMulti(CoarseGridMulti), | ||||
|     geom_srhs(_geom), | ||||
|     geom(_CoarseGridMulti,_geom.hops,_geom.skip+1), | ||||
|     Cell(geom.Depth(),_CoarseGridMulti), | ||||
|     Stencil(Cell.grids.back(),geom.shifts) // padded cell stencil | ||||
|   { | ||||
|     int32_t padded_sites   = Cell.grids.back()->lSites(); | ||||
|     int32_t unpadded_sites = CoarseGridMulti->lSites(); | ||||
|      | ||||
|     int32_t nrhs  = CoarseGridMulti->FullDimensions()[0];  // # RHS | ||||
|     int32_t orhs  = nrhs/CComplex::Nsimd(); | ||||
|  | ||||
|     padded_sites   = padded_sites/nrhs; | ||||
|     unpadded_sites = unpadded_sites/nrhs; | ||||
|      | ||||
|     ///////////////////////////////////////////////// | ||||
|     // Device data vector storage | ||||
|     ///////////////////////////////////////////////// | ||||
|     BLAS_A.resize(geom.npoint); | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       BLAS_A[p].resize (unpadded_sites); // no ghost zone, npoint elements | ||||
|     } | ||||
|      | ||||
|     BLAS_B.resize(nrhs *padded_sites);   // includes ghost zone | ||||
|     BLAS_C.resize(nrhs *unpadded_sites); // no ghost zone | ||||
|     BLAS_AP.resize(geom.npoint); | ||||
|     BLAS_BP.resize(geom.npoint); | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       BLAS_AP[p].resize(unpadded_sites); | ||||
|       BLAS_BP[p].resize(unpadded_sites); | ||||
|     } | ||||
|     BLAS_CP.resize(unpadded_sites); | ||||
|  | ||||
|     ///////////////////////////////////////////////// | ||||
|     // Pointers to data | ||||
|     ///////////////////////////////////////////////// | ||||
|  | ||||
|     // Site identity mapping for A | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       for(int ss=0;ss<unpadded_sites;ss++){ | ||||
| 	ComplexD *ptr = (ComplexD *)&BLAS_A[p][ss]; | ||||
| 	acceleratorPut(BLAS_AP[p][ss],ptr); | ||||
|       } | ||||
|     } | ||||
|     // Site identity mapping for C | ||||
|     for(int ss=0;ss<unpadded_sites;ss++){ | ||||
|       ComplexD *ptr = (ComplexD *)&BLAS_C[ss*nrhs]; | ||||
|       acceleratorPut(BLAS_CP[ss],ptr); | ||||
|     } | ||||
|  | ||||
|     // Neighbour table is more complicated | ||||
|     int32_t j=0; // Interior point counter (unpadded) | ||||
|     for(int32_t s=0;s<padded_sites;s++){ // 4 volume, padded | ||||
|       int ghost_zone=0; | ||||
|       for(int32_t point = 0 ; point < geom.npoint; point++){ | ||||
| 	int i=s*orhs*geom.npoint+point; | ||||
| 	if( Stencil._entries[i]._wrap ) { // stencil is indexed by the oSite of the CoarseGridMulti, hence orhs factor | ||||
| 	  ghost_zone=1; // If general stencil wrapped in any direction, wrap=1 | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       if( ghost_zone==0) { | ||||
| 	for(int32_t point = 0 ; point < geom.npoint; point++){ | ||||
| 	  int i=s*orhs*geom.npoint+point; | ||||
|  	  int32_t nbr = Stencil._entries[i]._offset*CComplex::Nsimd(); // oSite -> lSite | ||||
| 	  assert(nbr<BLAS_B.size()); | ||||
| 	  ComplexD * ptr = (ComplexD *)&BLAS_B[nbr]; | ||||
| 	  acceleratorPut(BLAS_BP[point][j],ptr); // neighbour indexing in ghost zone volume | ||||
| 	} | ||||
| 	j++; | ||||
|       } | ||||
|     } | ||||
|     assert(j==unpadded_sites); | ||||
|   } | ||||
|   template<class vobj> void GridtoBLAS(const Lattice<vobj> &from,deviceVector<typename vobj::scalar_object> &to) | ||||
|   { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   GridBase *Fg = from.Grid(); | ||||
|   assert(!Fg->_isCheckerBoarded); | ||||
|   int nd = Fg->_ndimension; | ||||
|  | ||||
|   to.resize(Fg->lSites()); | ||||
|  | ||||
|   Coordinate LocalLatt = Fg->LocalDimensions(); | ||||
|   size_t nsite = 1; | ||||
|   for(int i=0;i<nd;i++) nsite *= LocalLatt[i]; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // do the index calc on the GPU | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   Coordinate f_ostride = Fg->_ostride; | ||||
|   Coordinate f_istride = Fg->_istride; | ||||
|   Coordinate f_rdimensions = Fg->_rdimensions; | ||||
|  | ||||
|   autoView(from_v,from,AcceleratorRead); | ||||
|   auto to_v = &to[0]; | ||||
|  | ||||
|   const int words=sizeof(vobj)/sizeof(vector_type); | ||||
|   accelerator_for(idx,nsite,1,{ | ||||
|        | ||||
|       Coordinate from_coor, base; | ||||
|       Lexicographic::CoorFromIndex(base,idx,LocalLatt); | ||||
|       for(int i=0;i<nd;i++){ | ||||
| 	from_coor[i] = base[i]; | ||||
|       } | ||||
|       int from_oidx = 0; for(int d=0;d<nd;d++) from_oidx+=f_ostride[d]*(from_coor[d]%f_rdimensions[d]); | ||||
|       int from_lane = 0; for(int d=0;d<nd;d++) from_lane+=f_istride[d]*(from_coor[d]/f_rdimensions[d]); | ||||
|  | ||||
|       const vector_type* from = (const vector_type *)&from_v[from_oidx]; | ||||
|       scalar_type* to = (scalar_type *)&to_v[idx]; | ||||
|        | ||||
|       scalar_type stmp; | ||||
|       for(int w=0;w<words;w++){ | ||||
| 	stmp = getlane(from[w], from_lane); | ||||
| 	to[w] = stmp; | ||||
|       } | ||||
|     }); | ||||
|   }     | ||||
|   template<class vobj> void BLAStoGrid(Lattice<vobj> &grid,deviceVector<typename vobj::scalar_object> &in) | ||||
|   { | ||||
|   typedef typename vobj::scalar_object sobj; | ||||
|   typedef typename vobj::scalar_type scalar_type; | ||||
|   typedef typename vobj::vector_type vector_type; | ||||
|  | ||||
|   GridBase *Tg = grid.Grid(); | ||||
|   assert(!Tg->_isCheckerBoarded); | ||||
|   int nd = Tg->_ndimension; | ||||
|    | ||||
|   assert(in.size()==Tg->lSites()); | ||||
|  | ||||
|   Coordinate LocalLatt = Tg->LocalDimensions(); | ||||
|   size_t nsite = 1; | ||||
|   for(int i=0;i<nd;i++) nsite *= LocalLatt[i]; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // do the index calc on the GPU | ||||
|   //////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   Coordinate t_ostride = Tg->_ostride; | ||||
|   Coordinate t_istride = Tg->_istride; | ||||
|   Coordinate t_rdimensions = Tg->_rdimensions; | ||||
|  | ||||
|   autoView(to_v,grid,AcceleratorWrite); | ||||
|   auto from_v = &in[0]; | ||||
|  | ||||
|   const int words=sizeof(vobj)/sizeof(vector_type); | ||||
|   accelerator_for(idx,nsite,1,{ | ||||
|        | ||||
|       Coordinate to_coor, base; | ||||
|       Lexicographic::CoorFromIndex(base,idx,LocalLatt); | ||||
|       for(int i=0;i<nd;i++){ | ||||
| 	to_coor[i] = base[i]; | ||||
|       } | ||||
|       int to_oidx = 0; for(int d=0;d<nd;d++) to_oidx+=t_ostride[d]*(to_coor[d]%t_rdimensions[d]); | ||||
|       int to_lane = 0; for(int d=0;d<nd;d++) to_lane+=t_istride[d]*(to_coor[d]/t_rdimensions[d]); | ||||
|  | ||||
|       vector_type* to = (vector_type *)&to_v[to_oidx]; | ||||
|       scalar_type* from = (scalar_type *)&from_v[idx]; | ||||
|        | ||||
|       scalar_type stmp; | ||||
|       for(int w=0;w<words;w++){ | ||||
| 	stmp=from[w]; | ||||
| 	putlane(to[w], stmp, to_lane); | ||||
|       } | ||||
|     }); | ||||
|   } | ||||
|   void CoarsenOperator(LinearOperatorBase<Lattice<Fobj> > &linop, | ||||
| 		       Aggregation<Fobj,CComplex,nbasis> & Subspace, | ||||
| 		       GridBase *CoarseGrid) | ||||
|   { | ||||
| #if 0 | ||||
|     std::cout << GridLogMessage<< "GeneralCoarsenMatrixMrhs "<< std::endl; | ||||
|  | ||||
|     GridBase *grid = Subspace.FineGrid; | ||||
|  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Orthogonalise the subblocks over the basis | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     CoarseScalar InnerProd(CoarseGrid);  | ||||
|     blockOrthogonalise(InnerProd,Subspace.subspace); | ||||
|  | ||||
|     const int npoint = geom_srhs.npoint; | ||||
|  | ||||
|     Coordinate clatt = CoarseGrid->GlobalDimensions(); | ||||
|     int Nd = CoarseGrid->Nd(); | ||||
|       /* | ||||
|        *     Here, k,l index which possible momentum/shift within the N-points connected by MdagM. | ||||
|        *     Matrix index i is mapped to this shift via  | ||||
|        *               geom.shifts[i] | ||||
|        * | ||||
|        *     conj(pha[block]) proj[k (which mom)][j (basis vec cpt)][block]  | ||||
|        *       =  \sum_{l in ball}  e^{i q_k . delta_l} < phi_{block,j} | MdagM | phi_{(block+delta_l),i} >  | ||||
|        *       =  \sum_{l in ball} e^{iqk.delta_l} A_ji^{b.b+l} | ||||
|        *       = M_{kl} A_ji^{b.b+l} | ||||
|        * | ||||
|        *     Must assemble and invert matrix M_k,l = e^[i q_k . delta_l] | ||||
|        *   | ||||
|        *     Where q_k = delta_k . (2*M_PI/global_nb[mu]) | ||||
|        * | ||||
|        *     Then A{ji}^{b,b+l} = M^{-1}_{lm} ComputeProj_{m,b,i,j} | ||||
|        */ | ||||
|     Eigen::MatrixXcd Mkl    = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     Eigen::MatrixXcd invMkl = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     ComplexD ci(0.0,1.0); | ||||
|     for(int k=0;k<npoint;k++){ // Loop over momenta | ||||
|  | ||||
|       for(int l=0;l<npoint;l++){ // Loop over nbr relative | ||||
| 	ComplexD phase(0.0,0.0); | ||||
| 	for(int mu=0;mu<Nd;mu++){ | ||||
| 	  RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	  phase=phase+TwoPiL*geom_srhs.shifts[k][mu]*geom_srhs.shifts[l][mu]; | ||||
| 	} | ||||
| 	phase=exp(phase*ci); | ||||
| 	Mkl(k,l) = phase; | ||||
|       } | ||||
|     } | ||||
|     invMkl = Mkl.inverse(); | ||||
|  | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     // Now compute the matrix elements of linop between the orthonormal | ||||
|     // set of vectors. | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     FineField phaV(grid); // Phased block basis vector | ||||
|     FineField MphaV(grid);// Matrix applied | ||||
|     std::vector<FineComplexField> phaF(npoint,grid); | ||||
|     std::vector<CoarseComplexField> pha(npoint,CoarseGrid); | ||||
|      | ||||
|     CoarseVector coarseInner(CoarseGrid); | ||||
|      | ||||
|     typedef typename CComplex::scalar_type SComplex; | ||||
|     FineComplexField one(grid); one=SComplex(1.0); | ||||
|     FineComplexField zz(grid); zz = Zero(); | ||||
|     for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // Stick a phase on every block | ||||
|       ///////////////////////////////////////////////////// | ||||
|       CoarseComplexField coor(CoarseGrid); | ||||
|       pha[p]=Zero(); | ||||
|       for(int mu=0;mu<Nd;mu++){ | ||||
| 	LatticeCoordinate(coor,mu); | ||||
| 	RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	pha[p] = pha[p] + (TwoPiL * geom_srhs.shifts[p][mu]) * coor; | ||||
|       } | ||||
|       pha[p]  =exp(pha[p]*ci);	 | ||||
|  | ||||
|       blockZAXPY(phaF[p],pha[p],one,zz); | ||||
|     } | ||||
|  | ||||
|     // Could save on temporary storage here | ||||
|     std::vector<CoarseMatrix> _A; | ||||
|     _A.resize(geom_srhs.npoint,CoarseGrid); | ||||
|  | ||||
|     std::vector<CoarseVector> ComputeProj(npoint,CoarseGrid); | ||||
|     CoarseVector          FT(CoarseGrid); | ||||
|     for(int i=0;i<nbasis;i++){// Loop over basis vectors | ||||
|       std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl; | ||||
|       for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
|  | ||||
| 	phaV = phaF[p]*Subspace.subspace[i]; | ||||
|  | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	// Multiple phased subspace vector by matrix and project to subspace | ||||
| 	// Remove local bulk phase to leave relative phases | ||||
| 	///////////////////////////////////////////////////////////////////// | ||||
| 	linop.Op(phaV,MphaV); | ||||
|  | ||||
| 	// Fixme, could use batched block projector here | ||||
| 	blockProject(coarseInner,MphaV,Subspace.subspace); | ||||
|  | ||||
| 	coarseInner = conjugate(pha[p]) * coarseInner; | ||||
|  | ||||
| 	ComputeProj[p] = coarseInner; | ||||
|       } | ||||
|  | ||||
|       // Could do this with a block promote or similar BLAS call via the MultiRHSBlockProjector with a const matrix. | ||||
|       for(int k=0;k<npoint;k++){ | ||||
|  | ||||
| 	FT = Zero(); | ||||
| 	for(int l=0;l<npoint;l++){ | ||||
| 	  FT= FT+ invMkl(l,k)*ComputeProj[l]; | ||||
| 	} | ||||
|        | ||||
| 	int osites=CoarseGrid->oSites(); | ||||
| 	autoView( A_v  , _A[k], AcceleratorWrite); | ||||
| 	autoView( FT_v  , FT, AcceleratorRead); | ||||
| 	accelerator_for(sss, osites, 1, { | ||||
| 	    for(int j=0;j<nbasis;j++){ | ||||
| 	      A_v[sss](i,j) = FT_v[sss](j); | ||||
| 	    } | ||||
|         }); | ||||
|       } | ||||
|     } | ||||
|  | ||||
|     // Only needed if nonhermitian | ||||
|     //    if ( ! hermitian ) { | ||||
|     //      std::cout << GridLogMessage<<"PopulateAdag  "<<std::endl; | ||||
|     //      PopulateAdag(); | ||||
|     //    } | ||||
|     // Need to write something to populate Adag from A | ||||
|  | ||||
|     for(int p=0;p<geom_srhs.npoint;p++){ | ||||
|       GridtoBLAS(_A[p],BLAS_A[p]); | ||||
|     } | ||||
|     /* | ||||
| Grid : Message : 11698.730546 s : CoarsenOperator eigen  1334 us | ||||
| Grid : Message : 11698.730563 s : CoarsenOperator phase  34729 us | ||||
| Grid : Message : 11698.730565 s : CoarsenOperator phaseBZ 2423814 us | ||||
| Grid : Message : 11698.730566 s : CoarsenOperator mat    127890998 us | ||||
| Grid : Message : 11698.730567 s : CoarsenOperator proj   515840840 us | ||||
| Grid : Message : 11698.730568 s : CoarsenOperator inv    103948313 us | ||||
| Takes 600s to compute matrix elements, DOMINATED by the block project. | ||||
| Easy to speed up with the batched block project. | ||||
| Store npoint vectors, get npoint x Nbasis block projection, and 81 fold faster. | ||||
|  | ||||
| // Block project below taks to 240s | ||||
| Grid : Message : 328.193418 s : CoarsenOperator phase      38338 us | ||||
| Grid : Message : 328.193434 s : CoarsenOperator phaseBZ  1711226 us | ||||
| Grid : Message : 328.193436 s : CoarsenOperator mat    122213270 us | ||||
| //Grid : Message : 328.193438 s : CoarsenOperator proj   1181154 us <-- this is mistimed | ||||
| //Grid : Message : 11698.730568 s : CoarsenOperator inv  103948313 us <-- Cut this ~10x if lucky by loop fusion | ||||
|      */ | ||||
| #else | ||||
|     RealD tproj=0.0; | ||||
|     RealD tmat=0.0; | ||||
|     RealD tphase=0.0; | ||||
|     RealD tphaseBZ=0.0; | ||||
|     RealD tinv=0.0; | ||||
|  | ||||
|     std::cout << GridLogMessage<< "GeneralCoarsenMatrixMrhs "<< std::endl; | ||||
|  | ||||
|     GridBase *grid = Subspace.FineGrid; | ||||
|  | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     // Orthogonalise the subblocks over the basis | ||||
|     ///////////////////////////////////////////////////////////// | ||||
|     CoarseScalar InnerProd(CoarseGrid);  | ||||
|     blockOrthogonalise(InnerProd,Subspace.subspace); | ||||
|  | ||||
|  | ||||
|     MultiRHSBlockProject<Lattice<Fobj> >    Projector; | ||||
|     Projector.Allocate(nbasis,grid,CoarseGrid); | ||||
|     Projector.ImportBasis(Subspace.subspace); | ||||
|      | ||||
|     const int npoint = geom_srhs.npoint; | ||||
|  | ||||
|     Coordinate clatt = CoarseGrid->GlobalDimensions(); | ||||
|     int Nd = CoarseGrid->Nd(); | ||||
|       /* | ||||
|        *     Here, k,l index which possible momentum/shift within the N-points connected by MdagM. | ||||
|        *     Matrix index i is mapped to this shift via  | ||||
|        *               geom.shifts[i] | ||||
|        * | ||||
|        *     conj(pha[block]) proj[k (which mom)][j (basis vec cpt)][block]  | ||||
|        *       =  \sum_{l in ball}  e^{i q_k . delta_l} < phi_{block,j} | MdagM | phi_{(block+delta_l),i} >  | ||||
|        *       =  \sum_{l in ball} e^{iqk.delta_l} A_ji^{b.b+l} | ||||
|        *       = M_{kl} A_ji^{b.b+l} | ||||
|        * | ||||
|        *     Must assemble and invert matrix M_k,l = e^[i q_k . delta_l] | ||||
|        *   | ||||
|        *     Where q_k = delta_k . (2*M_PI/global_nb[mu]) | ||||
|        * | ||||
|        *     Then A{ji}^{b,b+l} = M^{-1}_{lm} ComputeProj_{m,b,i,j} | ||||
|        */ | ||||
|     Eigen::MatrixXcd Mkl    = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     Eigen::MatrixXcd invMkl = Eigen::MatrixXcd::Zero(npoint,npoint); | ||||
|     ComplexD ci(0.0,1.0); | ||||
|     for(int k=0;k<npoint;k++){ // Loop over momenta | ||||
|  | ||||
|       for(int l=0;l<npoint;l++){ // Loop over nbr relative | ||||
| 	ComplexD phase(0.0,0.0); | ||||
| 	for(int mu=0;mu<Nd;mu++){ | ||||
| 	  RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	  phase=phase+TwoPiL*geom_srhs.shifts[k][mu]*geom_srhs.shifts[l][mu]; | ||||
| 	} | ||||
| 	phase=exp(phase*ci); | ||||
| 	Mkl(k,l) = phase; | ||||
|       } | ||||
|     } | ||||
|     invMkl = Mkl.inverse(); | ||||
|  | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     // Now compute the matrix elements of linop between the orthonormal | ||||
|     // set of vectors. | ||||
|     /////////////////////////////////////////////////////////////////////// | ||||
|     FineField phaV(grid); // Phased block basis vector | ||||
|     FineField MphaV(grid);// Matrix applied | ||||
|     std::vector<FineComplexField> phaF(npoint,grid); | ||||
|     std::vector<CoarseComplexField> pha(npoint,CoarseGrid); | ||||
|      | ||||
|     CoarseVector coarseInner(CoarseGrid); | ||||
|      | ||||
|     tphase=-usecond(); | ||||
|     typedef typename CComplex::scalar_type SComplex; | ||||
|     FineComplexField one(grid); one=SComplex(1.0); | ||||
|     FineComplexField zz(grid); zz = Zero(); | ||||
|     for(int p=0;p<npoint;p++){ // Loop over momenta in npoint | ||||
|       ///////////////////////////////////////////////////// | ||||
|       // Stick a phase on every block | ||||
|       ///////////////////////////////////////////////////// | ||||
|       CoarseComplexField coor(CoarseGrid); | ||||
|       pha[p]=Zero(); | ||||
|       for(int mu=0;mu<Nd;mu++){ | ||||
| 	LatticeCoordinate(coor,mu); | ||||
| 	RealD TwoPiL =  M_PI * 2.0/ clatt[mu]; | ||||
| 	pha[p] = pha[p] + (TwoPiL * geom_srhs.shifts[p][mu]) * coor; | ||||
|       } | ||||
|       pha[p]  =exp(pha[p]*ci);	 | ||||
|  | ||||
|       blockZAXPY(phaF[p],pha[p],one,zz); | ||||
|     } | ||||
|     tphase+=usecond(); | ||||
|  | ||||
|     // Could save on temporary storage here | ||||
|     std::vector<CoarseMatrix> _A; | ||||
|     _A.resize(geom_srhs.npoint,CoarseGrid); | ||||
|  | ||||
|     // Count use small chunks than npoint == 81 and save memory | ||||
|     int batch = 9; | ||||
|     std::vector<FineField>    _MphaV(batch,grid); | ||||
|     std::vector<CoarseVector> TmpProj(batch,CoarseGrid); | ||||
|  | ||||
|     std::vector<CoarseVector> ComputeProj(npoint,CoarseGrid); | ||||
|     CoarseVector          FT(CoarseGrid); | ||||
|     for(int i=0;i<nbasis;i++){// Loop over basis vectors | ||||
|       std::cout << GridLogMessage<< "CoarsenMatrixColoured vec "<<i<<"/"<<nbasis<< std::endl; | ||||
|  | ||||
|       //      std::cout << GridLogMessage << " phasing the fine vector "<<std::endl; | ||||
|       // Fixme : do this in batches | ||||
|       for(int p=0;p<npoint;p+=batch){ // Loop over momenta in npoint | ||||
|  | ||||
| 	for(int b=0;b<MIN(batch,npoint-p);b++){ | ||||
| 	  tphaseBZ-=usecond(); | ||||
| 	  phaV = phaF[p+b]*Subspace.subspace[i]; | ||||
| 	  tphaseBZ+=usecond(); | ||||
|  | ||||
| 	  ///////////////////////////////////////////////////////////////////// | ||||
| 	  // Multiple phased subspace vector by matrix and project to subspace | ||||
| 	  // Remove local bulk phase to leave relative phases | ||||
| 	  ///////////////////////////////////////////////////////////////////// | ||||
| 	  // Memory footprint was an issue | ||||
| 	  tmat-=usecond(); | ||||
| 	  linop.Op(phaV,MphaV); | ||||
| 	  _MphaV[b] = MphaV; | ||||
| 	  tmat+=usecond(); | ||||
| 	}       | ||||
|  | ||||
| 	//	std::cout << GridLogMessage << " Calling block project "<<std::endl; | ||||
| 	tproj-=usecond(); | ||||
| 	Projector.blockProject(_MphaV,TmpProj); | ||||
| 	tproj+=usecond(); | ||||
| 	 | ||||
| 	//	std::cout << GridLogMessage << " conj phasing the coarse vectors "<<std::endl; | ||||
| 	for(int b=0;b<MIN(batch,npoint-p);b++){ | ||||
| 	  ComputeProj[p+b] = conjugate(pha[p+b])*TmpProj[b]; | ||||
| 	} | ||||
|       } | ||||
|  | ||||
|       // Could do this with a block promote or similar BLAS call via the MultiRHSBlockProjector with a const matrix. | ||||
|        | ||||
|       // std::cout << GridLogMessage << " Starting FT inv "<<std::endl; | ||||
|       tinv-=usecond(); | ||||
|       for(int k=0;k<npoint;k++){ | ||||
| 	FT = Zero(); | ||||
| 	// 81 kernel calls as many ComputeProj vectors | ||||
| 	// Could fuse with a vector of views, but ugly | ||||
| 	// Could unroll the expression and run fewer kernels -- much more attractive | ||||
| 	// Could also do non blocking. | ||||
| #if 0	 | ||||
| 	for(int l=0;l<npoint;l++){ | ||||
| 	  FT= FT+ invMkl(l,k)*ComputeProj[l]; | ||||
| 	} | ||||
| #else | ||||
| 	const int radix = 9; | ||||
| 	int ll; | ||||
| 	for(ll=0;ll+radix-1<npoint;ll+=radix){ | ||||
| 	  // When ll = npoint-radix, ll+radix-1 = npoint-1, and we do it all. | ||||
| 	  FT = FT  | ||||
| 	    + invMkl(ll+0,k)*ComputeProj[ll+0] | ||||
| 	    + invMkl(ll+1,k)*ComputeProj[ll+1] | ||||
| 	    + invMkl(ll+2,k)*ComputeProj[ll+2] | ||||
| 	    + invMkl(ll+3,k)*ComputeProj[ll+3] | ||||
| 	    + invMkl(ll+4,k)*ComputeProj[ll+4] | ||||
| 	    + invMkl(ll+5,k)*ComputeProj[ll+5] | ||||
| 	    + invMkl(ll+6,k)*ComputeProj[ll+6] | ||||
| 	    + invMkl(ll+7,k)*ComputeProj[ll+7] | ||||
| 	    + invMkl(ll+8,k)*ComputeProj[ll+8]; | ||||
| 	} | ||||
| 	for(int l=ll;l<npoint;l++){ | ||||
| 	  FT= FT+ invMkl(l,k)*ComputeProj[l]; | ||||
| 	} | ||||
| #endif | ||||
|        | ||||
| 	// 1 kernel call -- must be cheaper | ||||
| 	int osites=CoarseGrid->oSites(); | ||||
| 	autoView( A_v  , _A[k], AcceleratorWrite); | ||||
| 	autoView( FT_v  , FT, AcceleratorRead); | ||||
| 	accelerator_for(sss, osites, 1, { | ||||
| 	    for(int j=0;j<nbasis;j++){ | ||||
| 	      A_v[sss](i,j) = FT_v[sss](j); | ||||
| 	    } | ||||
|         }); | ||||
|       } | ||||
|       tinv+=usecond(); | ||||
|     } | ||||
|  | ||||
|     // Only needed if nonhermitian | ||||
|     //    if ( ! hermitian ) { | ||||
|     //      std::cout << GridLogMessage<<"PopulateAdag  "<<std::endl; | ||||
|     //      PopulateAdag(); | ||||
|     //    } | ||||
|     // Need to write something to populate Adag from A | ||||
|     //    std::cout << GridLogMessage << " Calling GridtoBLAS "<<std::endl; | ||||
|     for(int p=0;p<geom_srhs.npoint;p++){ | ||||
|       GridtoBLAS(_A[p],BLAS_A[p]); | ||||
|     } | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator phase  "<<tphase<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator phaseBZ "<<tphaseBZ<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator mat    "<<tmat <<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator proj   "<<tproj<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"CoarsenOperator inv    "<<tinv<<" us"<<std::endl; | ||||
| #endif | ||||
|   } | ||||
|   void Mdag(const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     this->M(in,out); | ||||
|   } | ||||
|   void M (const CoarseVector &in, CoarseVector &out) | ||||
|   { | ||||
|     //    std::cout << GridLogMessage << "New Mrhs coarse"<<std::endl; | ||||
|     conformable(CoarseGrid(),in.Grid()); | ||||
|     conformable(in.Grid(),out.Grid()); | ||||
|     out.Checkerboard() = in.Checkerboard(); | ||||
|  | ||||
|     RealD t_tot; | ||||
|     RealD t_exch; | ||||
|     RealD t_GtoB; | ||||
|     RealD t_BtoG; | ||||
|     RealD t_mult; | ||||
|  | ||||
|     t_tot=-usecond(); | ||||
|     CoarseVector tin=in; | ||||
|     t_exch=-usecond(); | ||||
|     CoarseVector pin = Cell.ExchangePeriodic(tin); //padded input | ||||
|     t_exch+=usecond(); | ||||
|  | ||||
|     CoarseVector pout(pin.Grid()); | ||||
|  | ||||
|     int npoint = geom.npoint; | ||||
|     typedef calcMatrix* Aview; | ||||
|     typedef LatticeView<Cvec> Vview; | ||||
|        | ||||
|     const int Nsimd = CComplex::Nsimd(); | ||||
|  | ||||
|     int64_t nrhs  =pin.Grid()->GlobalDimensions()[0]; | ||||
|     assert(nrhs>=1); | ||||
|  | ||||
|     RealD flops,bytes; | ||||
|     int64_t osites=in.Grid()->oSites(); // unpadded | ||||
|     int64_t unpadded_vol = CoarseGrid()->lSites()/nrhs; | ||||
|      | ||||
|     flops = 1.0* npoint * nbasis * nbasis * 8.0 * osites * CComplex::Nsimd(); | ||||
|     bytes = 1.0*osites*sizeof(siteMatrix)*npoint/pin.Grid()->GlobalDimensions()[0] | ||||
|           + 2.0*osites*sizeof(siteVector)*npoint; | ||||
|      | ||||
|  | ||||
|     t_GtoB=-usecond(); | ||||
|     GridtoBLAS(pin,BLAS_B); | ||||
|     t_GtoB+=usecond(); | ||||
|  | ||||
|     GridBLAS BLAS; | ||||
|  | ||||
|     t_mult=-usecond(); | ||||
|     for(int p=0;p<geom.npoint;p++){ | ||||
|       RealD c = 1.0; | ||||
|       if (p==0) c = 0.0; | ||||
|       ComplexD beta(c); | ||||
|  | ||||
|       BLAS.gemmBatched(nbasis,nrhs,nbasis, | ||||
| 		       ComplexD(1.0), | ||||
| 		       BLAS_AP[p],  | ||||
| 		       BLAS_BP[p],  | ||||
| 		       ComplexD(c),  | ||||
| 		       BLAS_CP); | ||||
|     } | ||||
|     BLAS.synchronise(); | ||||
|     t_mult+=usecond(); | ||||
|  | ||||
|     t_BtoG=-usecond(); | ||||
|     BLAStoGrid(out,BLAS_C); | ||||
|     t_BtoG+=usecond(); | ||||
|     t_tot+=usecond(); | ||||
|     /* | ||||
|     std::cout << GridLogMessage << "New Mrhs coarse DONE "<<std::endl; | ||||
|     std::cout << GridLogMessage<<"Coarse Mult exch "<<t_exch<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"Coarse Mult mult "<<t_mult<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"Coarse Mult GtoB  "<<t_GtoB<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"Coarse Mult BtoG  "<<t_BtoG<<" us"<<std::endl; | ||||
|     std::cout << GridLogMessage<<"Coarse Mult tot  "<<t_tot<<" us"<<std::endl; | ||||
|     */ | ||||
|     //    std::cout << GridLogMessage<<std::endl; | ||||
|     //    std::cout << GridLogMessage<<"Coarse Kernel flops "<< flops<<std::endl; | ||||
|     //    std::cout << GridLogMessage<<"Coarse Kernel flop/s "<< flops/t_mult<<" mflop/s"<<std::endl; | ||||
|     //    std::cout << GridLogMessage<<"Coarse Kernel bytes/s "<< bytes/t_mult/1000<<" GB/s"<<std::endl; | ||||
|     //    std::cout << GridLogMessage<<"Coarse overall flops/s "<< flops/t_tot<<" mflop/s"<<std::endl; | ||||
|     //    std::cout << GridLogMessage<<"Coarse total bytes   "<< bytes/1e6<<" MB"<<std::endl; | ||||
|   }; | ||||
|   virtual  void Mdiag    (const Field &in, Field &out){ assert(0);}; | ||||
|   virtual  void Mdir     (const Field &in, Field &out,int dir, int disp){assert(0);}; | ||||
|   virtual  void MdirAll  (const Field &in, std::vector<Field> &out){assert(0);}; | ||||
| }; | ||||
|    | ||||
| NAMESPACE_END(Grid); | ||||
							
								
								
									
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								Grid/algorithms/multigrid/Geometry.h
									
									
									
									
									
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										238
									
								
								Grid/algorithms/multigrid/Geometry.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,238 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/algorithms/GeneralCoarsenedMatrix.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////// | ||||
| // Geometry class in cartesian case | ||||
| ///////////////////////////////////////////////////////////////// | ||||
|  | ||||
| class Geometry { | ||||
| public: | ||||
|   int npoint; | ||||
|   int base; | ||||
|   std::vector<int> directions   ; | ||||
|   std::vector<int> displacements; | ||||
|   std::vector<int> points_dagger; | ||||
|  | ||||
|   Geometry(int _d)  { | ||||
|      | ||||
|     base = (_d==5) ? 1:0; | ||||
|  | ||||
|     // make coarse grid stencil for 4d , not 5d | ||||
|     if ( _d==5 ) _d=4; | ||||
|  | ||||
|     npoint = 2*_d+1; | ||||
|     directions.resize(npoint); | ||||
|     displacements.resize(npoint); | ||||
|     points_dagger.resize(npoint); | ||||
|     for(int d=0;d<_d;d++){ | ||||
|       directions[d   ] = d+base; | ||||
|       directions[d+_d] = d+base; | ||||
|       displacements[d  ] = +1; | ||||
|       displacements[d+_d]= -1; | ||||
|       points_dagger[d   ] = d+_d; | ||||
|       points_dagger[d+_d] = d; | ||||
|     } | ||||
|     directions   [2*_d]=0; | ||||
|     displacements[2*_d]=0; | ||||
|     points_dagger[2*_d]=2*_d; | ||||
|   } | ||||
|  | ||||
|   int point(int dir, int disp) { | ||||
|     assert(disp == -1 || disp == 0 || disp == 1); | ||||
|     assert(base+0 <= dir && dir < base+4); | ||||
|  | ||||
|     // directions faster index = new indexing | ||||
|     // 4d (base = 0): | ||||
|     // point 0  1  2  3  4  5  6  7  8 | ||||
|     // dir   0  1  2  3  0  1  2  3  0 | ||||
|     // disp +1 +1 +1 +1 -1 -1 -1 -1  0 | ||||
|     // 5d (base = 1): | ||||
|     // point 0  1  2  3  4  5  6  7  8 | ||||
|     // dir   1  2  3  4  1  2  3  4  0 | ||||
|     // disp +1 +1 +1 +1 -1 -1 -1 -1  0 | ||||
|  | ||||
|     // displacements faster index = old indexing | ||||
|     // 4d (base = 0): | ||||
|     // point 0  1  2  3  4  5  6  7  8 | ||||
|     // dir   0  0  1  1  2  2  3  3  0 | ||||
|     // disp +1 -1 +1 -1 +1 -1 +1 -1  0 | ||||
|     // 5d (base = 1): | ||||
|     // point 0  1  2  3  4  5  6  7  8 | ||||
|     // dir   1  1  2  2  3  3  4  4  0 | ||||
|     // disp +1 -1 +1 -1 +1 -1 +1 -1  0 | ||||
|  | ||||
|     if(dir == 0 and disp == 0) | ||||
|       return 8; | ||||
|     else // New indexing | ||||
|       return (1 - disp) / 2 * 4 + dir - base; | ||||
|     // else // Old indexing | ||||
|     //   return (4 * (dir - base) + 1 - disp) / 2; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////// | ||||
| // Less local equivalent of Geometry class in cartesian case | ||||
| ///////////////////////////////////////////////////////////////// | ||||
| class NonLocalStencilGeometry { | ||||
| public: | ||||
|   //  int depth; | ||||
|   int skip; | ||||
|   int hops; | ||||
|   int npoint; | ||||
|   std::vector<Coordinate> shifts; | ||||
|   Coordinate stencil_size; | ||||
|   Coordinate stencil_lo; | ||||
|   Coordinate stencil_hi; | ||||
|   GridCartesian *grid; | ||||
|   GridCartesian *Grid() {return grid;}; | ||||
|   int Depth(void){return 1;};   // Ghost zone depth | ||||
|   int Hops(void){return hops;}; // # of hops=> level of corner fill in in stencil | ||||
|   int DimSkip(void){return skip;}; | ||||
|  | ||||
|   virtual ~NonLocalStencilGeometry() {}; | ||||
|  | ||||
|   int  Reverse(int point) | ||||
|   { | ||||
|     int Nd = Grid()->Nd(); | ||||
|     Coordinate shft = shifts[point]; | ||||
|     Coordinate rev(Nd); | ||||
|     for(int mu=0;mu<Nd;mu++) rev[mu]= -shft[mu]; | ||||
|     for(int p=0;p<npoint;p++){ | ||||
|       if(rev==shifts[p]){ | ||||
| 	return p; | ||||
|       } | ||||
|     } | ||||
|     assert(0); | ||||
|     return -1; | ||||
|   } | ||||
|   void BuildShifts(void) | ||||
|   { | ||||
|     this->shifts.resize(0); | ||||
|     int Nd = this->grid->Nd(); | ||||
|  | ||||
|     int dd = this->DimSkip(); | ||||
|     for(int s0=this->stencil_lo[dd+0];s0<=this->stencil_hi[dd+0];s0++){ | ||||
|     for(int s1=this->stencil_lo[dd+1];s1<=this->stencil_hi[dd+1];s1++){ | ||||
|     for(int s2=this->stencil_lo[dd+2];s2<=this->stencil_hi[dd+2];s2++){ | ||||
|     for(int s3=this->stencil_lo[dd+3];s3<=this->stencil_hi[dd+3];s3++){ | ||||
|       Coordinate sft(Nd,0); | ||||
|       sft[dd+0] = s0; | ||||
|       sft[dd+1] = s1; | ||||
|       sft[dd+2] = s2; | ||||
|       sft[dd+3] = s3; | ||||
|       int nhops = abs(s0)+abs(s1)+abs(s2)+abs(s3); | ||||
|       if(nhops<=this->hops) this->shifts.push_back(sft); | ||||
|     }}}} | ||||
|     this->npoint = this->shifts.size(); | ||||
|     std::cout << GridLogMessage << "NonLocalStencilGeometry has "<< this->npoint << " terms in stencil "<<std::endl; | ||||
|   } | ||||
|    | ||||
|   NonLocalStencilGeometry(GridCartesian *_coarse_grid,int _hops,int _skip) : grid(_coarse_grid), hops(_hops), skip(_skip) | ||||
|   { | ||||
|     Coordinate latt = grid->GlobalDimensions(); | ||||
|     stencil_size.resize(grid->Nd()); | ||||
|     stencil_lo.resize(grid->Nd()); | ||||
|     stencil_hi.resize(grid->Nd()); | ||||
|     for(int d=0;d<grid->Nd();d++){ | ||||
|      if ( latt[d] == 1 ) { | ||||
|       stencil_lo[d] = 0; | ||||
|       stencil_hi[d] = 0; | ||||
|       stencil_size[d]= 1; | ||||
|      } else if ( latt[d] == 2 ) { | ||||
|       stencil_lo[d] = -1; | ||||
|       stencil_hi[d] = 0; | ||||
|       stencil_size[d]= 2; | ||||
|      } else if ( latt[d] > 2 ) { | ||||
|        stencil_lo[d] = -1; | ||||
|        stencil_hi[d] =  1; | ||||
|        stencil_size[d]= 3; | ||||
|      } | ||||
|     } | ||||
|     this->BuildShifts(); | ||||
|   }; | ||||
|  | ||||
| }; | ||||
|  | ||||
| // Need to worry about red-black now | ||||
| class NonLocalStencilGeometry4D : public NonLocalStencilGeometry { | ||||
| public: | ||||
|   virtual int DerivedDimSkip(void) { return 0;}; | ||||
|   NonLocalStencilGeometry4D(GridCartesian *Coarse,int _hops) : NonLocalStencilGeometry(Coarse,_hops,0) { }; | ||||
|   virtual ~NonLocalStencilGeometry4D() {}; | ||||
| }; | ||||
| class NonLocalStencilGeometry5D : public NonLocalStencilGeometry { | ||||
| public: | ||||
|   virtual int DerivedDimSkip(void) { return 1; };  | ||||
|   NonLocalStencilGeometry5D(GridCartesian *Coarse,int _hops) : NonLocalStencilGeometry(Coarse,_hops,1)  { }; | ||||
|   virtual ~NonLocalStencilGeometry5D() {}; | ||||
| }; | ||||
| /* | ||||
|  * Bunch of different options classes | ||||
|  */ | ||||
| class NextToNextToNextToNearestStencilGeometry4D : public NonLocalStencilGeometry4D { | ||||
| public: | ||||
|   NextToNextToNextToNearestStencilGeometry4D(GridCartesian *Coarse) :  NonLocalStencilGeometry4D(Coarse,4) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
| class NextToNextToNextToNearestStencilGeometry5D : public  NonLocalStencilGeometry5D { | ||||
| public: | ||||
|   NextToNextToNextToNearestStencilGeometry5D(GridCartesian *Coarse) :  NonLocalStencilGeometry5D(Coarse,4) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
| class NextToNearestStencilGeometry4D : public  NonLocalStencilGeometry4D { | ||||
| public: | ||||
|   NextToNearestStencilGeometry4D(GridCartesian *Coarse) :  NonLocalStencilGeometry4D(Coarse,2) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
| class NextToNearestStencilGeometry5D : public  NonLocalStencilGeometry5D { | ||||
| public: | ||||
|   NextToNearestStencilGeometry5D(GridCartesian *Coarse) :  NonLocalStencilGeometry5D(Coarse,2) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
| class NearestStencilGeometry4D : public  NonLocalStencilGeometry4D { | ||||
| public: | ||||
|   NearestStencilGeometry4D(GridCartesian *Coarse) :  NonLocalStencilGeometry4D(Coarse,1) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
| class NearestStencilGeometry5D : public  NonLocalStencilGeometry5D { | ||||
| public: | ||||
|   NearestStencilGeometry5D(GridCartesian *Coarse) :  NonLocalStencilGeometry5D(Coarse,1) | ||||
|   { | ||||
|   }; | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -2,11 +2,11 @@ | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid | ||||
| 
 | ||||
|     Source file: ./lib/algorithms/Preconditioner.h | ||||
|     Source file: Grid/algorithms/multigrid/MultiGrid.h | ||||
| 
 | ||||
|     Copyright (C) 2015 | ||||
|     Copyright (C) 2023 | ||||
| 
 | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <pboyle@bnl.gov> | ||||
| 
 | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
| @@ -25,22 +25,10 @@ Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| #ifndef GRID_PRECONDITIONER_H | ||||
| #define GRID_PRECONDITIONER_H | ||||
| #pragma once | ||||
| 
 | ||||
| namespace Grid { | ||||
| 
 | ||||
|   template<class Field> class Preconditioner :  public LinearFunction<Field> {  | ||||
|     virtual void operator()(const Field &src, Field & psi)=0; | ||||
|   }; | ||||
| 
 | ||||
|   template<class Field> class TrivialPrecon :  public Preconditioner<Field> {  | ||||
|   public: | ||||
|     void operator()(const Field &src, Field & psi){ | ||||
|       psi = src; | ||||
|     } | ||||
|     TrivialPrecon(void){}; | ||||
|   }; | ||||
| 
 | ||||
| } | ||||
| #endif | ||||
| #include <Grid/algorithms/multigrid/Aggregates.h> | ||||
| #include <Grid/algorithms/multigrid/Geometry.h> | ||||
| #include <Grid/algorithms/multigrid/CoarsenedMatrix.h> | ||||
| #include <Grid/algorithms/multigrid/GeneralCoarsenedMatrix.h> | ||||
| #include <Grid/algorithms/multigrid/GeneralCoarsenedMatrixMultiRHS.h> | ||||
							
								
								
									
										220
									
								
								Grid/allocator/AlignedAllocator.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										220
									
								
								Grid/allocator/AlignedAllocator.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,220 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/AlignedAllocator.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| template<typename _Tp> | ||||
| class alignedAllocator { | ||||
| public:  | ||||
|   typedef std::size_t     size_type; | ||||
|   typedef std::ptrdiff_t  difference_type; | ||||
|   typedef _Tp*       pointer; | ||||
|   typedef const _Tp* const_pointer; | ||||
|   typedef _Tp&       reference; | ||||
|   typedef const _Tp& const_reference; | ||||
|   typedef _Tp        value_type; | ||||
|  | ||||
|   template<typename _Tp1>  struct rebind { typedef alignedAllocator<_Tp1> other; }; | ||||
|   alignedAllocator() throw() { } | ||||
|   alignedAllocator(const alignedAllocator&) throw() { } | ||||
|   template<typename _Tp1> alignedAllocator(const alignedAllocator<_Tp1>&) throw() { } | ||||
|   ~alignedAllocator() throw() { } | ||||
|   pointer       address(reference __x)       const { return &__x; } | ||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||
|  | ||||
|   pointer allocate(size_type __n, const void* _p= 0) | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::CpuAllocate(bytes); | ||||
|     if ( (_Tp*)ptr == (_Tp *) NULL ) { | ||||
|       printf("Grid CPU Allocator got NULL for %lu bytes\n",(unsigned long) bytes ); | ||||
|     } | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|     profilerFree(bytes); | ||||
|     MemoryManager::CpuFree((void *)__p,bytes); | ||||
|   } | ||||
|  | ||||
|   // FIXME: hack for the copy constructor: it must be avoided to avoid single thread loop | ||||
|   void construct(pointer __p, const _Tp& __val) { assert(0);}; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const alignedAllocator<_Tp>&, const alignedAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Unified virtual memory | ||||
| ////////////////////////////////////////////////////////////////////////////////////// | ||||
| template<typename _Tp> | ||||
| class uvmAllocator { | ||||
| public:  | ||||
|   typedef std::size_t     size_type; | ||||
|   typedef std::ptrdiff_t  difference_type; | ||||
|   typedef _Tp*       pointer; | ||||
|   typedef const _Tp* const_pointer; | ||||
|   typedef _Tp&       reference; | ||||
|   typedef const _Tp& const_reference; | ||||
|   typedef _Tp        value_type; | ||||
|  | ||||
|   template<typename _Tp1>  struct rebind { typedef uvmAllocator<_Tp1> other; }; | ||||
|   uvmAllocator() throw() { } | ||||
|   uvmAllocator(const uvmAllocator&) throw() { } | ||||
|   template<typename _Tp1> uvmAllocator(const uvmAllocator<_Tp1>&) throw() { } | ||||
|   ~uvmAllocator() throw() { } | ||||
|   pointer       address(reference __x)       const { return &__x; } | ||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||
|  | ||||
|   pointer allocate(size_type __n, const void* _p= 0) | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::SharedAllocate(bytes); | ||||
|     if ( (_Tp*)ptr == (_Tp *) NULL ) { | ||||
|       printf("Grid Shared Allocator got NULL for %lu bytes\n",(unsigned long) bytes ); | ||||
|     } | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|     profilerFree(bytes); | ||||
|     MemoryManager::SharedFree((void *)__p,bytes); | ||||
|   } | ||||
|  | ||||
|   void construct(pointer __p, const _Tp& __val) { new((void *)__p) _Tp(__val); }; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const uvmAllocator<_Tp>&, const uvmAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Device memory | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| template<typename _Tp> | ||||
| class devAllocator { | ||||
| public:  | ||||
|   typedef std::size_t     size_type; | ||||
|   typedef std::ptrdiff_t  difference_type; | ||||
|   typedef _Tp*       pointer; | ||||
|   typedef const _Tp* const_pointer; | ||||
|   typedef _Tp&       reference; | ||||
|   typedef const _Tp& const_reference; | ||||
|   typedef _Tp        value_type; | ||||
|  | ||||
|   template<typename _Tp1>  struct rebind { typedef devAllocator<_Tp1> other; }; | ||||
|   devAllocator() throw() { } | ||||
|   devAllocator(const devAllocator&) throw() { } | ||||
|   template<typename _Tp1> devAllocator(const devAllocator<_Tp1>&) throw() { } | ||||
|   ~devAllocator() throw() { } | ||||
|   pointer       address(reference __x)       const { return &__x; } | ||||
|   size_type  max_size() const throw() { return size_t(-1) / sizeof(_Tp); } | ||||
|  | ||||
|   pointer allocate(size_type __n, const void* _p= 0) | ||||
|   {  | ||||
|     size_type bytes = __n*sizeof(_Tp); | ||||
|     profilerAllocate(bytes); | ||||
|     _Tp *ptr = (_Tp*) MemoryManager::AcceleratorAllocate(bytes); | ||||
|     if ( (_Tp*)ptr == (_Tp *) NULL ) { | ||||
|       printf("Grid Device Allocator got NULL for %lu bytes\n",(unsigned long) bytes ); | ||||
|     } | ||||
|     assert( ( (_Tp*)ptr != (_Tp *)NULL ) ); | ||||
|     return ptr; | ||||
|   } | ||||
|  | ||||
|   void deallocate(pointer __p, size_type __n)  | ||||
|   {  | ||||
|     size_type bytes = __n * sizeof(_Tp); | ||||
|     profilerFree(bytes); | ||||
|     MemoryManager::AcceleratorFree((void *)__p,bytes); | ||||
|   } | ||||
|   void construct(pointer __p, const _Tp& __val) { }; | ||||
|   void construct(pointer __p) { }; | ||||
|   void destroy(pointer __p) { }; | ||||
| }; | ||||
| template<typename _Tp>  inline bool operator==(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return true; } | ||||
| template<typename _Tp>  inline bool operator!=(const devAllocator<_Tp>&, const devAllocator<_Tp>&){ return false; } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // Template typedefs | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| template<class T> using hostVector          = std::vector<T,alignedAllocator<T> >;           // Needs autoview | ||||
| template<class T> using Vector              = std::vector<T,uvmAllocator<T> >;               //  | ||||
| template<class T> using uvmVector           = std::vector<T,uvmAllocator<T> >;               // auto migrating page | ||||
| template<class T> using deviceVector        = std::vector<T,devAllocator<T> >;               // device vector | ||||
|  | ||||
| template<class T> class vecView | ||||
| { | ||||
|  protected: | ||||
|   T * data; | ||||
|   uint64_t size; | ||||
|   ViewMode mode; | ||||
|   void * cpu_ptr; | ||||
|  public: | ||||
|   // Rvalue accessor | ||||
|   accelerator_inline T & operator[](size_t i) const { return this->data[i]; }; | ||||
|   vecView(Vector<T> &refer_to_me,ViewMode _mode) | ||||
|   { | ||||
|     cpu_ptr = &refer_to_me[0]; | ||||
|     size = refer_to_me.size(); | ||||
|     mode = _mode; | ||||
|     data =(T *) MemoryManager::ViewOpen(cpu_ptr, | ||||
| 					size*sizeof(T), | ||||
| 					mode, | ||||
| 					AdviseDefault); | ||||
|   } | ||||
|   void ViewClose(void) | ||||
|   { // Inform the manager | ||||
|     MemoryManager::ViewClose(this->cpu_ptr,this->mode);     | ||||
|   } | ||||
| }; | ||||
|  | ||||
| template<class T> vecView<T> VectorView(Vector<T> &vec,ViewMode _mode) | ||||
| { | ||||
|   vecView<T> ret(vec,_mode); // does the open | ||||
|   return ret;                // must be closed | ||||
| } | ||||
|  | ||||
| #define autoVecView(v_v,v,mode)					\ | ||||
|   auto v_v = VectorView(v,mode);				\ | ||||
|   ViewCloser<decltype(v_v)> _autoView##v_v(v_v); | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
							
								
								
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										4
									
								
								Grid/allocator/Allocator.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,4 @@ | ||||
| #pragma once | ||||
| #include <Grid/allocator/MemoryStats.h> | ||||
| #include <Grid/allocator/MemoryManager.h> | ||||
| #include <Grid/allocator/AlignedAllocator.h> | ||||
							
								
								
									
										362
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										362
									
								
								Grid/allocator/MemoryManager.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,362 @@ | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| /*Allocation types, saying which pointer cache should be used*/ | ||||
| #define Cpu      (0) | ||||
| #define CpuHuge  (1) | ||||
| #define CpuSmall (2) | ||||
| #define Acc      (3) | ||||
| #define AccHuge  (4) | ||||
| #define AccSmall (5) | ||||
| #define Shared   (6) | ||||
| #define SharedHuge  (7) | ||||
| #define SharedSmall (8) | ||||
| #undef GRID_MM_VERBOSE  | ||||
| uint64_t total_shared; | ||||
| uint64_t total_device; | ||||
| uint64_t total_host;; | ||||
|  | ||||
| #if defined(__has_feature) | ||||
| #if __has_feature(leak_sanitizer) | ||||
| #define ASAN_LEAK_CHECK | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| #ifdef ASAN_LEAK_CHECK | ||||
| #include <sanitizer/asan_interface.h> | ||||
| #include <sanitizer/common_interface_defs.h> | ||||
| #include <sanitizer/lsan_interface.h> | ||||
| #define LEAK_CHECK(A) { __lsan_do_recoverable_leak_check(); } | ||||
| #else | ||||
| #define LEAK_CHECK(A) { } | ||||
| #endif | ||||
|  | ||||
| void MemoryManager::DisplayMallinfo(void) | ||||
| { | ||||
| #ifdef __linux__ | ||||
|   struct mallinfo mi; // really want mallinfo2, but glibc version isn't uniform | ||||
|    | ||||
|   mi = mallinfo(); | ||||
|  | ||||
|   std::cout << "MemoryManager: Total non-mmapped bytes (arena):       "<< (size_t)mi.arena<<std::endl; | ||||
|   std::cout << "MemoryManager: # of free chunks (ordblks):            "<< (size_t)mi.ordblks<<std::endl; | ||||
|   std::cout << "MemoryManager: # of free fastbin blocks (smblks):     "<< (size_t)mi.smblks<<std::endl; | ||||
|   std::cout << "MemoryManager: # of mapped regions (hblks):           "<< (size_t)mi.hblks<<std::endl; | ||||
|   std::cout << "MemoryManager: Bytes in mapped regions (hblkhd):      "<< (size_t)mi.hblkhd<<std::endl; | ||||
|   std::cout << "MemoryManager: Max. total allocated space (usmblks):  "<< (size_t)mi.usmblks<<std::endl; | ||||
|   std::cout << "MemoryManager: Free bytes held in fastbins (fsmblks): "<< (size_t)mi.fsmblks<<std::endl; | ||||
|   std::cout << "MemoryManager: Total allocated space (uordblks):      "<< (size_t)mi.uordblks<<std::endl; | ||||
|   std::cout << "MemoryManager: Total free space (fordblks):           "<< (size_t)mi.fordblks<<std::endl; | ||||
|   std::cout << "MemoryManager: Topmost releasable block (keepcost):   "<< (size_t)mi.keepcost<<std::endl; | ||||
| #endif | ||||
|   LEAK_CHECK(); | ||||
|   | ||||
| } | ||||
|  | ||||
| void MemoryManager::PrintBytes(void) | ||||
| { | ||||
|   std::cout << " MemoryManager : ------------------------------------ "<<std::endl; | ||||
|   std::cout << " MemoryManager : PrintBytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : ------------------------------------ "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_shared>>20)<<" shared      Mbytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_device>>20)<<" accelerator Mbytes "<<std::endl; | ||||
|   std::cout << " MemoryManager : "<<(total_host>>20)  <<" cpu         Mbytes "<<std::endl; | ||||
|   uint64_t cacheBytes; | ||||
|   cacheBytes = CacheBytes[Cpu]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" cpu cache Mbytes "<<std::endl; | ||||
|   cacheBytes = CacheBytes[Acc]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" acc cache Mbytes "<<std::endl; | ||||
|   cacheBytes = CacheBytes[Shared]; | ||||
|   std::cout << " MemoryManager : "<<(cacheBytes>>20) <<" shared cache Mbytes "<<std::endl; | ||||
|    | ||||
| #ifdef GRID_CUDA | ||||
|   cuda_mem(); | ||||
| #endif | ||||
|   DisplayMallinfo(); | ||||
| } | ||||
|  | ||||
| uint64_t MemoryManager::DeviceCacheBytes() { return CacheBytes[Acc] + CacheBytes[AccHuge] + CacheBytes[AccSmall]; } | ||||
| uint64_t MemoryManager::HostCacheBytes()   { return CacheBytes[Cpu] + CacheBytes[CpuHuge] + CacheBytes[CpuSmall]; } | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| // Data tables for recently freed pooiniter caches | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| MemoryManager::AllocationCacheEntry MemoryManager::Entries[MemoryManager::NallocType][MemoryManager::NallocCacheMax]; | ||||
| int MemoryManager::Victim[MemoryManager::NallocType]; | ||||
| int MemoryManager::Ncache[MemoryManager::NallocType] = { 2, 0, 8, 8, 0, 16, 8, 0, 16 }; | ||||
| uint64_t MemoryManager::CacheBytes[MemoryManager::NallocType]; | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| // Actual allocation and deallocation utils | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| void *MemoryManager::AcceleratorAllocate(size_t bytes) | ||||
| { | ||||
|   total_device+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Acc); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocDevice(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"AcceleratorAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::AcceleratorFree    (void *ptr,size_t bytes) | ||||
| { | ||||
|   total_device-=bytes; | ||||
|   void *__freeme = Insert(ptr,bytes,Acc); | ||||
|   if ( __freeme ) { | ||||
|     acceleratorFreeDevice(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"AcceleratorFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| void *MemoryManager::SharedAllocate(size_t bytes) | ||||
| { | ||||
|   total_shared+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Shared); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocShared(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"SharedAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::SharedFree    (void *ptr,size_t bytes) | ||||
| { | ||||
|   total_shared-=bytes; | ||||
|   void *__freeme = Insert(ptr,bytes,Shared); | ||||
|   if ( __freeme ) { | ||||
|     acceleratorFreeShared(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"SharedFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #ifdef GRID_UVM | ||||
| void *MemoryManager::CpuAllocate(size_t bytes) | ||||
| { | ||||
|   total_host+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Cpu); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocShared(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||
| { | ||||
|   total_host-=bytes; | ||||
|   NotifyDeletion(_ptr); | ||||
|   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||
|   if ( __freeme ) {  | ||||
|     acceleratorFreeShared(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #else | ||||
| void *MemoryManager::CpuAllocate(size_t bytes) | ||||
| { | ||||
|   total_host+=bytes; | ||||
|   void *ptr = (void *) Lookup(bytes,Cpu); | ||||
|   if ( ptr == (void *) NULL ) { | ||||
|     ptr = (void *) acceleratorAllocCpu(bytes); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuAllocate "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
|   return ptr; | ||||
| } | ||||
| void  MemoryManager::CpuFree    (void *_ptr,size_t bytes) | ||||
| { | ||||
|   total_host-=bytes; | ||||
|   NotifyDeletion(_ptr); | ||||
|   void *__freeme = Insert(_ptr,bytes,Cpu); | ||||
|   if ( __freeme ) {  | ||||
|     acceleratorFreeCpu(__freeme); | ||||
|   } | ||||
| #ifdef GRID_MM_VERBOSE | ||||
|   std::cout <<"CpuFree "<<std::endl; | ||||
|   PrintBytes(); | ||||
| #endif | ||||
| } | ||||
| #endif | ||||
|  | ||||
| ////////////////////////////////////////// | ||||
| // call only once | ||||
| ////////////////////////////////////////// | ||||
| void MemoryManager::Init(void) | ||||
| { | ||||
|  | ||||
|   char * str; | ||||
|   int Nc; | ||||
|    | ||||
|   str= getenv("GRID_ALLOC_NCACHE_LARGE"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[Cpu]=Nc; | ||||
|       Ncache[Acc]=Nc; | ||||
|       Ncache[Shared]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   str= getenv("GRID_ALLOC_NCACHE_HUGE"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[CpuHuge]=Nc; | ||||
|       Ncache[AccHuge]=Nc; | ||||
|       Ncache[SharedHuge]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   str= getenv("GRID_ALLOC_NCACHE_SMALL"); | ||||
|   if ( str ) { | ||||
|     Nc = atoi(str); | ||||
|     if ( (Nc>=0) && (Nc < NallocCacheMax)) { | ||||
|       Ncache[CpuSmall]=Nc; | ||||
|       Ncache[AccSmall]=Nc; | ||||
|       Ncache[SharedSmall]=Nc; | ||||
|     } | ||||
|   } | ||||
|  | ||||
| } | ||||
|  | ||||
| void MemoryManager::InitMessage(void) { | ||||
|  | ||||
| #ifndef GRID_UVM | ||||
|   std::cout << GridLogMessage << "MemoryManager Cache "<< MemoryManager::DeviceMaxBytes <<" bytes "<<std::endl; | ||||
| #endif | ||||
|    | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() setting up"<<std::endl; | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent host   allocations: SMALL "<<Ncache[CpuSmall]<<" LARGE "<<Ncache[Cpu]<<" HUGE "<<Ncache[CpuHuge]<<std::endl; | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent device allocations: SMALL "<<Ncache[AccSmall]<<" LARGE "<<Ncache[Acc]<<" Huge "<<Ncache[AccHuge]<<std::endl; | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() cache pool for recent shared allocations: SMALL "<<Ncache[SharedSmall]<<" LARGE "<<Ncache[Shared]<<" Huge "<<Ncache[SharedHuge]<<std::endl; | ||||
| #endif | ||||
|    | ||||
| #ifdef GRID_UVM | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Unified memory space"<<std::endl; | ||||
| #ifdef GRID_CUDA | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMallocManaged"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMallocManaged"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_shared"<<std::endl; | ||||
| #endif | ||||
| #else | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Non unified: Caching accelerator data in dedicated memory"<<std::endl; | ||||
| #ifdef GRID_CUDA | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using cudaMalloc"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_HIP | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using hipMalloc"<<std::endl; | ||||
| #endif | ||||
| #ifdef GRID_SYCL | ||||
|   std::cout << GridLogMessage<< "MemoryManager::Init() Using SYCL malloc_device"<<std::endl; | ||||
| #endif | ||||
| #endif | ||||
|  | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Insert(void *ptr,size_t bytes,int type)  | ||||
| { | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   int cache; | ||||
|   if      (bytes < GRID_ALLOC_SMALL_LIMIT) cache = type + 2; | ||||
|   else if (bytes >= GRID_ALLOC_HUGE_LIMIT) cache = type + 1; | ||||
|   else                                     cache = type; | ||||
|  | ||||
|   return Insert(ptr,bytes,Entries[cache],Ncache[cache],Victim[cache],CacheBytes[cache]);   | ||||
| #else | ||||
|   return ptr; | ||||
| #endif | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim, uint64_t &cacheBytes)  | ||||
| { | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
|  | ||||
|   if (ncache == 0) return ptr; | ||||
|  | ||||
|   void * ret = NULL; | ||||
|   int v = -1; | ||||
|  | ||||
|   for(int e=0;e<ncache;e++) { | ||||
|     if ( entries[e].valid==0 ) { | ||||
|       v=e;  | ||||
|       break; | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   if ( v==-1 ) { | ||||
|     v=victim; | ||||
|     victim = (victim+1)%ncache; | ||||
|   } | ||||
|  | ||||
|   if ( entries[v].valid ) { | ||||
|     ret = entries[v].address; | ||||
|     cacheBytes -= entries[v].bytes; | ||||
|     entries[v].valid = 0; | ||||
|     entries[v].address = NULL; | ||||
|     entries[v].bytes = 0; | ||||
|   } | ||||
|  | ||||
|   entries[v].address=ptr; | ||||
|   entries[v].bytes  =bytes; | ||||
|   entries[v].valid  =1; | ||||
|   cacheBytes += bytes; | ||||
|  | ||||
|   return ret; | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Lookup(size_t bytes,int type) | ||||
| { | ||||
| #ifdef ALLOCATION_CACHE | ||||
|   int cache; | ||||
|   if      (bytes < GRID_ALLOC_SMALL_LIMIT) cache = type + 2; | ||||
|   else if (bytes >= GRID_ALLOC_HUGE_LIMIT) cache = type + 1; | ||||
|   else                                     cache = type; | ||||
|  | ||||
|   return Lookup(bytes,Entries[cache],Ncache[cache],CacheBytes[cache]); | ||||
| #else | ||||
|   return NULL; | ||||
| #endif | ||||
| } | ||||
|  | ||||
| void *MemoryManager::Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache,uint64_t & cacheBytes)  | ||||
| { | ||||
| #ifdef GRID_OMP | ||||
|   assert(omp_in_parallel()==0); | ||||
| #endif  | ||||
|   for(int e=0;e<ncache;e++){ | ||||
|     if ( entries[e].valid && ( entries[e].bytes == bytes ) ) { | ||||
|       entries[e].valid = 0; | ||||
|       cacheBytes -= entries[e].bytes; | ||||
|       return entries[e].address; | ||||
|     } | ||||
|   } | ||||
|   return NULL; | ||||
| } | ||||
|  | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										227
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										227
									
								
								Grid/allocator/MemoryManager.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,227 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/MemoryManager.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
| #include <list>  | ||||
| #include <unordered_map>   | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| // Move control to configure.ac and Config.h? | ||||
|  | ||||
| #define GRID_ALLOC_SMALL_LIMIT (4096) | ||||
| #define GRID_ALLOC_HUGE_LIMIT  (2147483648) | ||||
|  | ||||
| #define STRINGIFY(x) #x | ||||
| #define TOSTRING(x) STRINGIFY(x) | ||||
| #define FILE_LINE __FILE__ ":" TOSTRING(__LINE__) | ||||
| #define AUDIT(a) MemoryManager::Audit(FILE_LINE) | ||||
|  | ||||
| /*Pinning pages is costly*/ | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // Advise the LatticeAccelerator class | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| enum ViewAdvise { | ||||
|  AdviseDefault       = 0x0,    // Regular data | ||||
|  AdviseInfrequentUse = 0x1     // Advise that the data is used infrequently.  This can | ||||
|                                // significantly influence performance of bulk storage. | ||||
|   | ||||
|  // AdviseTransient      = 0x2,   // Data will mostly be read.  On some architectures | ||||
|                                // enables read-only copies of memory to be kept on | ||||
|                                // host and device. | ||||
|  | ||||
|  // AdviseAcceleratorWriteDiscard = 0x4  // Field will be written in entirety on device | ||||
|  | ||||
| }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| // View Access Mode | ||||
| //////////////////////////////////////////////////////////////////////////// | ||||
| enum ViewMode { | ||||
|   AcceleratorRead  = 0x01, | ||||
|   AcceleratorWrite = 0x02, | ||||
|   AcceleratorWriteDiscard = 0x04, | ||||
|   CpuRead  = 0x08, | ||||
|   CpuWrite = 0x10, | ||||
|   CpuWriteDiscard = 0x10 // same for now | ||||
| }; | ||||
|  | ||||
| struct MemoryStatus { | ||||
|   uint64_t     DeviceBytes; | ||||
|   uint64_t     DeviceLRUBytes; | ||||
|   uint64_t     DeviceMaxBytes; | ||||
|   uint64_t     HostToDeviceBytes; | ||||
|   uint64_t     DeviceToHostBytes; | ||||
|   uint64_t     HostToDeviceXfer; | ||||
|   uint64_t     DeviceToHostXfer; | ||||
|   uint64_t     DeviceEvictions; | ||||
|   uint64_t     DeviceDestroy; | ||||
|   uint64_t     DeviceAllocCacheBytes; | ||||
|   uint64_t     HostAllocCacheBytes; | ||||
| }; | ||||
|  | ||||
|  | ||||
| class MemoryManager { | ||||
| private: | ||||
|  | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   // For caching recently freed allocations | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   typedef struct {  | ||||
|     void *address; | ||||
|     size_t bytes; | ||||
|     int valid; | ||||
|   } AllocationCacheEntry; | ||||
|  | ||||
|   static const int NallocCacheMax=128;  | ||||
|   static const int NallocType=9; | ||||
|   static AllocationCacheEntry Entries[NallocType][NallocCacheMax]; | ||||
|   static int Victim[NallocType]; | ||||
|   static int Ncache[NallocType]; | ||||
|   static uint64_t CacheBytes[NallocType]; | ||||
|  | ||||
|   ///////////////////////////////////////////////// | ||||
|   // Free pool | ||||
|   ///////////////////////////////////////////////// | ||||
|   static void *Insert(void *ptr,size_t bytes,int type) ; | ||||
|   static void *Lookup(size_t bytes,int type) ; | ||||
|   static void *Insert(void *ptr,size_t bytes,AllocationCacheEntry *entries,int ncache,int &victim,uint64_t &cbytes) ; | ||||
|   static void *Lookup(size_t bytes,AllocationCacheEntry *entries,int ncache,uint64_t &cbytes) ; | ||||
|  | ||||
|  public: | ||||
|   static void PrintBytes(void); | ||||
|   static void Audit(std::string s); | ||||
|   static void Init(void); | ||||
|   static void InitMessage(void); | ||||
|   static void *AcceleratorAllocate(size_t bytes); | ||||
|   static void  AcceleratorFree    (void *ptr,size_t bytes); | ||||
|   static void *SharedAllocate(size_t bytes); | ||||
|   static void  SharedFree    (void *ptr,size_t bytes); | ||||
|   static void *CpuAllocate(size_t bytes); | ||||
|   static void  CpuFree    (void *ptr,size_t bytes); | ||||
|  | ||||
|   //////////////////////////////////////////////////////// | ||||
|   // Footprint tracking | ||||
|   //////////////////////////////////////////////////////// | ||||
|   static uint64_t     DeviceBytes; | ||||
|   static uint64_t     DeviceLRUBytes; | ||||
|   static uint64_t     DeviceMaxBytes; | ||||
|   static uint64_t     HostToDeviceBytes; | ||||
|   static uint64_t     DeviceToHostBytes; | ||||
|   static uint64_t     HostToDeviceXfer; | ||||
|   static uint64_t     DeviceToHostXfer; | ||||
|   static uint64_t     DeviceEvictions; | ||||
|   static uint64_t     DeviceDestroy; | ||||
|    | ||||
|   static uint64_t     DeviceCacheBytes(); | ||||
|   static uint64_t     HostCacheBytes(); | ||||
|  | ||||
|   static MemoryStatus GetFootprint(void) { | ||||
|     MemoryStatus stat; | ||||
|     stat.DeviceBytes       = DeviceBytes; | ||||
|     stat.DeviceLRUBytes    = DeviceLRUBytes; | ||||
|     stat.DeviceMaxBytes    = DeviceMaxBytes; | ||||
|     stat.HostToDeviceBytes = HostToDeviceBytes; | ||||
|     stat.DeviceToHostBytes = DeviceToHostBytes; | ||||
|     stat.HostToDeviceXfer  = HostToDeviceXfer; | ||||
|     stat.DeviceToHostXfer  = DeviceToHostXfer; | ||||
|     stat.DeviceEvictions   = DeviceEvictions; | ||||
|     stat.DeviceDestroy     = DeviceDestroy; | ||||
|     stat.DeviceAllocCacheBytes = DeviceCacheBytes(); | ||||
|     stat.HostAllocCacheBytes   = HostCacheBytes(); | ||||
|     return stat; | ||||
|   }; | ||||
|    | ||||
|  private: | ||||
| #ifndef GRID_UVM | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   // Data tables for ViewCache | ||||
|   ////////////////////////////////////////////////////////////////////// | ||||
|   typedef std::list<uint64_t> LRU_t; | ||||
|   typedef typename LRU_t::iterator LRUiterator; | ||||
|   typedef struct {  | ||||
|     int        LRU_valid; | ||||
|     LRUiterator LRU_entry; | ||||
|     uint64_t CpuPtr; | ||||
|     uint64_t AccPtr; | ||||
|     size_t   bytes; | ||||
|     uint32_t transient; | ||||
|     uint32_t state; | ||||
|     uint32_t accLock; | ||||
|     uint32_t cpuLock; | ||||
|   } AcceleratorViewEntry; | ||||
|    | ||||
|   typedef std::unordered_map<uint64_t,AcceleratorViewEntry> AccViewTable_t; | ||||
|   typedef typename AccViewTable_t::iterator AccViewTableIterator ; | ||||
|  | ||||
|   static AccViewTable_t AccViewTable; | ||||
|   static LRU_t LRU; | ||||
|  | ||||
|   ///////////////////////////////////////////////// | ||||
|   // Device motion | ||||
|   ///////////////////////////////////////////////// | ||||
|   static void  Create(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void  EvictVictims(uint64_t bytes); // Frees up <bytes> | ||||
|   static void  Evict(AcceleratorViewEntry &AccCache); | ||||
|   static void  Flush(AcceleratorViewEntry &AccCache); | ||||
|   static void  Clone(AcceleratorViewEntry &AccCache); | ||||
|   static void  AccDiscard(AcceleratorViewEntry &AccCache); | ||||
|   static void  CpuDiscard(AcceleratorViewEntry &AccCache); | ||||
|  | ||||
|   //  static void  LRUupdate(AcceleratorViewEntry &AccCache); | ||||
|   static void  LRUinsert(AcceleratorViewEntry &AccCache); | ||||
|   static void  LRUremove(AcceleratorViewEntry &AccCache); | ||||
|    | ||||
|   // manage entries in the table | ||||
|   static int                  EntryPresent(uint64_t CpuPtr); | ||||
|   static void                 EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void                 EntryErase (uint64_t CpuPtr); | ||||
|   static AccViewTableIterator EntryLookup(uint64_t CpuPtr); | ||||
|   static void                 EntrySet   (uint64_t CpuPtr,AcceleratorViewEntry &entry); | ||||
|  | ||||
|   static void     AcceleratorViewClose(uint64_t AccPtr); | ||||
|   static uint64_t AcceleratorViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|   static void     CpuViewClose(uint64_t Ptr); | ||||
|   static uint64_t CpuViewOpen(uint64_t  CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
| #endif | ||||
|  | ||||
|  public: | ||||
|   static void DisplayMallinfo(void); | ||||
|   static void NotifyDeletion(void * CpuPtr); | ||||
|   static void Print(void); | ||||
|   static void PrintAll(void); | ||||
|   static void PrintState( void* CpuPtr); | ||||
|   static int   isOpen   (void* CpuPtr); | ||||
|   static void  ViewClose(void* CpuPtr,ViewMode mode); | ||||
|   static void *ViewOpen (void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint); | ||||
|  | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
							
								
								
									
										602
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										602
									
								
								Grid/allocator/MemoryManagerCache.cc
									
									
									
									
									
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							| @@ -0,0 +1,602 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #ifndef GRID_UVM | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| #define MAXLINE 512 | ||||
| static char print_buffer [ MAXLINE ]; | ||||
|  | ||||
| #define mprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogMemory << print_buffer << std::endl; | ||||
| #define dprintf(...) snprintf (print_buffer,MAXLINE, __VA_ARGS__ ); std::cout << GridLogDebug  << print_buffer << std::endl; | ||||
| //#define dprintf(...)  | ||||
|  | ||||
| //////////////////////////////////////////////////////////// | ||||
| // For caching copies of data on device | ||||
| //////////////////////////////////////////////////////////// | ||||
| MemoryManager::AccViewTable_t MemoryManager::AccViewTable; | ||||
| MemoryManager::LRU_t MemoryManager::LRU; | ||||
|    | ||||
| //////////////////////////////////////////////////////// | ||||
| // Footprint tracking | ||||
| //////////////////////////////////////////////////////// | ||||
| uint64_t  MemoryManager::DeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceLRUBytes; | ||||
| uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||
| uint64_t  MemoryManager::HostToDeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceToHostBytes; | ||||
| uint64_t  MemoryManager::HostToDeviceXfer; | ||||
| uint64_t  MemoryManager::DeviceToHostXfer; | ||||
| uint64_t  MemoryManager::DeviceEvictions; | ||||
| uint64_t  MemoryManager::DeviceDestroy; | ||||
|  | ||||
| //////////////////////////////////// | ||||
| // Priority ordering for unlocked entries | ||||
| //  Empty | ||||
| //  CpuDirty  | ||||
| //  Consistent | ||||
| //  AccDirty | ||||
| //////////////////////////////////// | ||||
| #define Empty         (0x0)  /*Entry unoccupied  */ | ||||
| #define CpuDirty      (0x1)  /*CPU copy is golden, Acc buffer MAY not be allocated*/ | ||||
| #define Consistent    (0x2)  /*ACC copy AND CPU copy are valid */ | ||||
| #define AccDirty      (0x4)  /*ACC copy is golden */ | ||||
| #define EvictNext     (0x8)  /*Priority for eviction*/ | ||||
|  | ||||
| ///////////////////////////////////////////////// | ||||
| // Mechanics of data table maintenance | ||||
| ///////////////////////////////////////////////// | ||||
| int   MemoryManager::EntryPresent(uint64_t CpuPtr) | ||||
| { | ||||
|   if(AccViewTable.empty()) return 0; | ||||
|  | ||||
|   auto count = AccViewTable.count(CpuPtr);  assert((count==0)||(count==1)); | ||||
|   return count; | ||||
| } | ||||
| void  MemoryManager::EntryCreate(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   assert(!EntryPresent(CpuPtr)); | ||||
|   AcceleratorViewEntry AccCache; | ||||
|   AccCache.CpuPtr = CpuPtr; | ||||
|   AccCache.AccPtr = (uint64_t)NULL; | ||||
|   AccCache.bytes  = bytes; | ||||
|   AccCache.state  = CpuDirty; | ||||
|   AccCache.LRU_valid=0; | ||||
|   AccCache.transient=0; | ||||
|   AccCache.accLock=0; | ||||
|   AccCache.cpuLock=0; | ||||
|   AccViewTable[CpuPtr] = AccCache; | ||||
| } | ||||
| MemoryManager::AccViewTableIterator MemoryManager::EntryLookup(uint64_t CpuPtr) | ||||
| { | ||||
|   assert(EntryPresent(CpuPtr)); | ||||
|   auto AccCacheIterator = AccViewTable.find(CpuPtr); | ||||
|   assert(AccCacheIterator!=AccViewTable.end()); | ||||
|   return AccCacheIterator; | ||||
| } | ||||
| void MemoryManager::EntryErase(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCache = EntryLookup(CpuPtr); | ||||
|   AccViewTable.erase(CpuPtr); | ||||
| } | ||||
| void  MemoryManager::LRUinsert(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.LRU_valid==0); | ||||
|   if (AccCache.transient) {  | ||||
|     LRU.push_back(AccCache.CpuPtr); | ||||
|     AccCache.LRU_entry = --LRU.end(); | ||||
|   } else { | ||||
|     LRU.push_front(AccCache.CpuPtr); | ||||
|     AccCache.LRU_entry = LRU.begin(); | ||||
|   } | ||||
|   AccCache.LRU_valid = 1; | ||||
|   DeviceLRUBytes+=AccCache.bytes; | ||||
| } | ||||
| void  MemoryManager::LRUremove(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.LRU_valid==1); | ||||
|   LRU.erase(AccCache.LRU_entry); | ||||
|   AccCache.LRU_valid = 0; | ||||
|   DeviceLRUBytes-=AccCache.bytes; | ||||
| } | ||||
| ///////////////////////////////////////////////// | ||||
| // Accelerator cache motion & consistency logic | ||||
| ///////////////////////////////////////////////// | ||||
| void MemoryManager::AccDiscard(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   /////////////////////////////////////////////////////////// | ||||
|   // Remove from Accelerator, remove entry, without flush | ||||
|   // Cannot be locked. If allocated Must be in LRU pool. | ||||
|   /////////////////////////////////////////////////////////// | ||||
|   assert(AccCache.state!=Empty); | ||||
|    | ||||
|   dprintf("MemoryManager: Discard(%lx) %lx\n",(uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr);  | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr) { | ||||
|     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||
|     DeviceDestroy++; | ||||
|     DeviceBytes   -=AccCache.bytes; | ||||
|     LRUremove(AccCache); | ||||
|     AccCache.AccPtr=(uint64_t) NULL; | ||||
|     dprintf("MemoryManager: Free(%lx) LRU %ld Total %ld\n",(uint64_t)AccCache.AccPtr,DeviceLRUBytes,DeviceBytes);   | ||||
|   } | ||||
|   uint64_t CpuPtr = AccCache.CpuPtr; | ||||
|   EntryErase(CpuPtr); | ||||
| } | ||||
|  | ||||
| void MemoryManager::Evict(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   // Make CPU consistent, remove from Accelerator, remove from LRU, LEAVE CPU only entry | ||||
|   // Cannot be acclocked. If allocated must be in LRU pool. | ||||
|   // | ||||
|   // Nov 2022... Felix issue: Allocating two CpuPtrs, can have an entry in LRU-q with CPUlock. | ||||
|   //                          and require to evict the AccPtr copy. Eviction was a mistake in CpuViewOpen | ||||
|   //                          but there is a weakness where CpuLock entries are attempted for erase | ||||
|   //                          Take these OUT LRU queue when CPU locked? | ||||
|   //                          Cannot take out the table as cpuLock data is important. | ||||
|   /////////////////////////////////////////////////////////////////////////// | ||||
|   assert(AccCache.state!=Empty); | ||||
|    | ||||
|   mprintf("MemoryManager: Evict CpuPtr %lx AccPtr %lx cpuLock %ld accLock %ld\n", | ||||
| 	  (uint64_t)AccCache.CpuPtr,(uint64_t)AccCache.AccPtr, | ||||
| 	  (uint64_t)AccCache.cpuLock,(uint64_t)AccCache.accLock);  | ||||
|   if (AccCache.accLock!=0) return; | ||||
|   if (AccCache.cpuLock!=0) return; | ||||
|   if(AccCache.state==AccDirty) { | ||||
|     Flush(AccCache); | ||||
|   } | ||||
|   if(AccCache.AccPtr) { | ||||
|     AcceleratorFree((void *)AccCache.AccPtr,AccCache.bytes); | ||||
|     LRUremove(AccCache); | ||||
|     AccCache.AccPtr=(uint64_t)NULL; | ||||
|     AccCache.state=CpuDirty; // CPU primary now | ||||
|     DeviceBytes   -=AccCache.bytes; | ||||
|     dprintf("MemoryManager: Free(AccPtr %lx) footprint now %ld \n",(uint64_t)AccCache.AccPtr,DeviceBytes);   | ||||
|   } | ||||
|   //  uint64_t CpuPtr = AccCache.CpuPtr; | ||||
|   DeviceEvictions++; | ||||
|   //  EntryErase(CpuPtr); | ||||
| } | ||||
| void MemoryManager::Flush(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state==AccDirty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.AccPtr!=(uint64_t)NULL); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   acceleratorCopyFromDevice((void *)AccCache.AccPtr,(void *)AccCache.CpuPtr,AccCache.bytes); | ||||
|   mprintf("MemoryManager: acceleratorCopyFromDevice Flush size %ld AccPtr %lx -> CpuPtr %lx\n",(uint64_t)AccCache.bytes,(uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||
|   DeviceToHostBytes+=AccCache.bytes; | ||||
|   DeviceToHostXfer++; | ||||
|   AccCache.state=Consistent; | ||||
| } | ||||
| void MemoryManager::Clone(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state==CpuDirty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||
|     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||
|     DeviceBytes+=AccCache.bytes; | ||||
|   } | ||||
|   mprintf("MemoryManager: acceleratorCopyToDevice   Clone size %ld AccPtr %lx <- CpuPtr %lx\n", | ||||
| 	  (uint64_t)AccCache.bytes, | ||||
| 	  (uint64_t)AccCache.AccPtr,(uint64_t)AccCache.CpuPtr); fflush(stdout); | ||||
|   acceleratorCopyToDevice((void *)AccCache.CpuPtr,(void *)AccCache.AccPtr,AccCache.bytes); | ||||
|   HostToDeviceBytes+=AccCache.bytes; | ||||
|   HostToDeviceXfer++; | ||||
|   AccCache.state=Consistent; | ||||
| } | ||||
|  | ||||
| void MemoryManager::CpuDiscard(AcceleratorViewEntry &AccCache) | ||||
| { | ||||
|   assert(AccCache.state!=Empty); | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock==0); | ||||
|   assert(AccCache.CpuPtr!=(uint64_t)NULL); | ||||
|   if(AccCache.AccPtr==(uint64_t)NULL){ | ||||
|     AccCache.AccPtr=(uint64_t)AcceleratorAllocate(AccCache.bytes); | ||||
|     DeviceBytes+=AccCache.bytes; | ||||
|   } | ||||
|   AccCache.state=AccDirty; | ||||
| } | ||||
|  | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| // View management | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| void MemoryManager::ViewClose(void* Ptr,ViewMode mode) | ||||
| { | ||||
|   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||
|     dprintf("AcceleratorViewClose %lx\n",(uint64_t)Ptr); | ||||
|     AcceleratorViewClose((uint64_t)Ptr); | ||||
|   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||
|     CpuViewClose((uint64_t)Ptr); | ||||
|   } else {  | ||||
|     assert(0); | ||||
|   } | ||||
| } | ||||
| void *MemoryManager::ViewOpen(void* _CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|   if( (mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard) ){ | ||||
|     dprintf("AcceleratorViewOpen %lx\n",(uint64_t)CpuPtr); | ||||
|     return (void *) AcceleratorViewOpen(CpuPtr,bytes,mode,hint); | ||||
|   } else if( (mode==CpuRead)||(mode==CpuWrite)){ | ||||
|     return (void *)CpuViewOpen(CpuPtr,bytes,mode,hint); | ||||
|   } else {  | ||||
|     assert(0); | ||||
|     return NULL; | ||||
|   } | ||||
| } | ||||
| void  MemoryManager::EvictVictims(uint64_t bytes) | ||||
| { | ||||
|   assert(bytes<DeviceMaxBytes); | ||||
|   while(bytes+DeviceLRUBytes > DeviceMaxBytes){ | ||||
|     if ( DeviceLRUBytes > 0){ | ||||
|       assert(LRU.size()>0); | ||||
|       uint64_t victim = LRU.back(); // From the LRU | ||||
|       auto AccCacheIterator = EntryLookup(victim); | ||||
|       auto & AccCache = AccCacheIterator->second; | ||||
|       Evict(AccCache); | ||||
|     } else { | ||||
|       return; | ||||
|     } | ||||
|   } | ||||
| } | ||||
| uint64_t MemoryManager::AcceleratorViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   // Find if present, otherwise get or force an empty | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   if ( EntryPresent(CpuPtr)==0 ){ | ||||
|     EntryCreate(CpuPtr,bytes,mode,hint); | ||||
|   } | ||||
|  | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|   if (!AccCache.AccPtr) { | ||||
|     EvictVictims(bytes);  | ||||
|   }  | ||||
|   assert((mode==AcceleratorRead)||(mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)); | ||||
|  | ||||
|   assert(AccCache.cpuLock==0);  // Programming error | ||||
|  | ||||
|   if(AccCache.state!=Empty) { | ||||
|     dprintf("ViewOpen found entry %lx %lx : sizes %ld %ld accLock %ld\n", | ||||
| 		    (uint64_t)AccCache.CpuPtr, | ||||
| 		    (uint64_t)CpuPtr, | ||||
| 		    (uint64_t)AccCache.bytes, | ||||
| 	            (uint64_t)bytes, | ||||
| 		    (uint64_t)AccCache.accLock); | ||||
|     assert(AccCache.CpuPtr == CpuPtr); | ||||
|     assert(AccCache.bytes  ==bytes); | ||||
|   } | ||||
| /* | ||||
|  *  State transitions and actions | ||||
|  * | ||||
|  *  Action  State   StateNext         Flush    Clone | ||||
|  * | ||||
|  *  AccRead  Empty   Consistent        -        Y | ||||
|  *  AccWrite Empty   AccDirty          -        Y | ||||
|  *  AccRead  CpuDirty Consistent       -        Y | ||||
|  *  AccWrite CpuDirty AccDirty         -        Y | ||||
|  *  AccRead  Consistent Consistent     -        -  | ||||
|  *  AccWrite Consistent AccDirty       -        -  | ||||
|  *  AccRead  AccDirty   AccDirty       -        -  | ||||
|  *  AccWrite AccDirty   AccDirty       -        -  | ||||
|  */ | ||||
|   if(AccCache.state==Empty) { | ||||
|     assert(AccCache.LRU_valid==0); | ||||
|     AccCache.CpuPtr = CpuPtr; | ||||
|     AccCache.AccPtr = (uint64_t)NULL; | ||||
|     AccCache.bytes  = bytes; | ||||
|     AccCache.state  = CpuDirty;   // Cpu starts primary | ||||
|     if(mode==AcceleratorWriteDiscard){ | ||||
|       CpuDiscard(AccCache); | ||||
|       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||
|     } else if(mode==AcceleratorWrite){ | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = AccDirty;   // Empty + AcceleratorWrite=> AccDirty | ||||
|     } else { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = Consistent; // Empty + AccRead => Consistent | ||||
|     } | ||||
|     AccCache.accLock= 1; | ||||
|     dprintf("Copied Empty entry into device accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==CpuDirty ){ | ||||
|     if(mode==AcceleratorWriteDiscard) { | ||||
|       CpuDiscard(AccCache); | ||||
|       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||
|     } else if(mode==AcceleratorWrite) { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = AccDirty;   // CpuDirty + AcceleratorWrite=> AccDirty | ||||
|     } else { | ||||
|       Clone(AccCache); | ||||
|       AccCache.state  = Consistent; // CpuDirty + AccRead => Consistent | ||||
|     } | ||||
|     AccCache.accLock++; | ||||
|     dprintf("CpuDirty entry into device ++accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==Consistent) { | ||||
|     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||
|       AccCache.state  = AccDirty;   // Consistent + AcceleratorWrite=> AccDirty | ||||
|     else | ||||
|       AccCache.state  = Consistent; // Consistent + AccRead => Consistent | ||||
|     AccCache.accLock++; | ||||
|     dprintf("Consistent entry into device ++accLock= %d\n",AccCache.accLock); | ||||
|   } else if(AccCache.state==AccDirty) { | ||||
|     if((mode==AcceleratorWrite)||(mode==AcceleratorWriteDiscard)) | ||||
|       AccCache.state  = AccDirty; // AccDirty + AcceleratorWrite=> AccDirty | ||||
|     else | ||||
|       AccCache.state  = AccDirty; // AccDirty + AccRead => AccDirty | ||||
|     AccCache.accLock++; | ||||
|     dprintf("AccDirty entry ++accLock= %d\n",AccCache.accLock); | ||||
|   } else { | ||||
|     assert(0); | ||||
|   } | ||||
|  | ||||
|   assert(AccCache.accLock>0); | ||||
|   // If view is opened on device must remove from LRU | ||||
|   if(AccCache.LRU_valid==1){ | ||||
|     // must possibly remove from LRU as now locked on GPU | ||||
|     dprintf("AccCache entry removed from LRU \n"); | ||||
|     LRUremove(AccCache); | ||||
|   } | ||||
|  | ||||
|   int transient =hint; | ||||
|   AccCache.transient= transient? EvictNext : 0; | ||||
|  | ||||
|   return AccCache.AccPtr; | ||||
| } | ||||
| //////////////////////////////////// | ||||
| // look up & decrement lock count | ||||
| //////////////////////////////////// | ||||
| void MemoryManager::AcceleratorViewClose(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   assert(AccCache.cpuLock==0); | ||||
|   assert(AccCache.accLock>0); | ||||
|  | ||||
|   AccCache.accLock--; | ||||
|   // Move to LRU queue if not locked and close on device | ||||
|   if(AccCache.accLock==0) { | ||||
|     dprintf("AccleratorViewClose %lx AccLock decremented to %ld move to LRU queue\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock); | ||||
|     LRUinsert(AccCache); | ||||
|   } else { | ||||
|     dprintf("AccleratorViewClose %lx AccLock decremented to %ld\n",(uint64_t)CpuPtr,(uint64_t)AccCache.accLock); | ||||
|   } | ||||
| } | ||||
| void MemoryManager::CpuViewClose(uint64_t CpuPtr) | ||||
| { | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   assert(AccCache.cpuLock>0); | ||||
|   assert(AccCache.accLock==0); | ||||
|  | ||||
|   AccCache.cpuLock--; | ||||
| } | ||||
| /* | ||||
|  *  Action  State   StateNext         Flush    Clone | ||||
|  * | ||||
|  *  CpuRead  Empty   CpuDirty          -        - | ||||
|  *  CpuWrite Empty   CpuDirty          -        - | ||||
|  *  CpuRead  CpuDirty CpuDirty         -        - | ||||
|  *  CpuWrite CpuDirty CpuDirty         -        -  | ||||
|  *  CpuRead  Consistent Consistent     -        -  | ||||
|  *  CpuWrite Consistent CpuDirty       -        -  | ||||
|  *  CpuRead  AccDirty   Consistent     Y        - | ||||
|  *  CpuWrite AccDirty   CpuDirty       Y        - | ||||
|  */ | ||||
| uint64_t MemoryManager::CpuViewOpen(uint64_t CpuPtr,size_t bytes,ViewMode mode,ViewAdvise transient) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   // Find if present, otherwise get or force an empty | ||||
|   //////////////////////////////////////////////////////////////////////////// | ||||
|   if ( EntryPresent(CpuPtr)==0 ){ | ||||
|     EntryCreate(CpuPtr,bytes,mode,transient); | ||||
|   } | ||||
|  | ||||
|   auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|   auto & AccCache = AccCacheIterator->second; | ||||
|  | ||||
|   // CPU doesn't need to free space | ||||
|   //  if (!AccCache.AccPtr) { | ||||
|   //    EvictVictims(bytes); | ||||
|   //  } | ||||
|  | ||||
|   assert((mode==CpuRead)||(mode==CpuWrite)); | ||||
|   assert(AccCache.accLock==0);  // Programming error | ||||
|  | ||||
|   if(AccCache.state!=Empty) { | ||||
|     assert(AccCache.CpuPtr == CpuPtr); | ||||
|     assert(AccCache.bytes==bytes); | ||||
|   } | ||||
|  | ||||
|   if(AccCache.state==Empty) { | ||||
|     AccCache.CpuPtr = CpuPtr; | ||||
|     AccCache.AccPtr = (uint64_t)NULL; | ||||
|     AccCache.bytes  = bytes; | ||||
|     AccCache.state  = CpuDirty; // Empty + CpuRead/CpuWrite => CpuDirty | ||||
|     AccCache.accLock= 0; | ||||
|     AccCache.cpuLock= 1; | ||||
|   } else if(AccCache.state==CpuDirty ){ | ||||
|     // AccPtr dont care, deferred allocate | ||||
|     AccCache.state = CpuDirty; // CpuDirty +CpuRead/CpuWrite => CpuDirty | ||||
|     AccCache.cpuLock++; | ||||
|   } else if(AccCache.state==Consistent) { | ||||
|     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||
|     if(mode==CpuWrite) | ||||
|       AccCache.state = CpuDirty;   // Consistent +CpuWrite => CpuDirty | ||||
|     else  | ||||
|       AccCache.state = Consistent; // Consistent +CpuRead  => Consistent | ||||
|     AccCache.cpuLock++; | ||||
|   } else if(AccCache.state==AccDirty) { | ||||
|     assert(AccCache.AccPtr != (uint64_t)NULL); | ||||
|     Flush(AccCache); | ||||
|     if(mode==CpuWrite) AccCache.state = CpuDirty;   // AccDirty +CpuWrite => CpuDirty, Flush | ||||
|     else            AccCache.state = Consistent; // AccDirty +CpuRead  => Consistent, Flush | ||||
|     AccCache.cpuLock++; | ||||
|   } else { | ||||
|     assert(0); // should be unreachable | ||||
|   } | ||||
|  | ||||
|   AccCache.transient= transient? EvictNext : 0; | ||||
|  | ||||
|   return AccCache.CpuPtr; | ||||
| } | ||||
| void  MemoryManager::NotifyDeletion(void *_ptr) | ||||
| { | ||||
|   // Look up in ViewCache | ||||
|   uint64_t ptr = (uint64_t)_ptr; | ||||
|   if(EntryPresent(ptr)) { | ||||
|     auto e = EntryLookup(ptr); | ||||
|     AccDiscard(e->second); | ||||
|   } | ||||
| } | ||||
| void  MemoryManager::Print(void) | ||||
| { | ||||
|   PrintBytes(); | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << "Memory Manager                             " << std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceBytes   << " bytes allocated on device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceLRUBytes<< " bytes evictable on device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceMaxBytes<< " bytes max on device       " << std::endl; | ||||
|   std::cout << GridLogMessage << HostToDeviceXfer << " transfers        to   device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceToHostXfer << " transfers        from device " << std::endl; | ||||
|   std::cout << GridLogMessage << HostToDeviceBytes<< " bytes transfered to   device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceToHostBytes<< " bytes transfered from device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceEvictions  << " Evictions from device " << std::endl; | ||||
|   std::cout << GridLogMessage << DeviceDestroy    << " Destroyed vectors on device " << std::endl; | ||||
|   std::cout << GridLogMessage << AccViewTable.size()<< " vectors " << LRU.size()<<" evictable"<< std::endl; | ||||
|   acceleratorMem(); | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
| } | ||||
| void  MemoryManager::PrintAll(void) | ||||
| { | ||||
|   Print(); | ||||
|   std::cout << GridLogMessage << std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   std::cout << GridLogMessage << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||
|     auto &AccCache = it->second; | ||||
|      | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|  | ||||
|     std::cout << GridLogMessage << "0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
| 	      << "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
| 	      << "\t" << AccCache.cpuLock | ||||
| 	      << "\t" << AccCache.accLock | ||||
| 	      << "\t" << AccCache.LRU_valid<<std::endl; | ||||
|   } | ||||
|   std::cout << GridLogMessage << "--------------------------------------------" << std::endl; | ||||
|  | ||||
| }; | ||||
| int   MemoryManager::isOpen   (void* _CpuPtr)  | ||||
| {  | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|   if ( EntryPresent(CpuPtr) ){ | ||||
|     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     return AccCache.cpuLock+AccCache.accLock; | ||||
|   } else {  | ||||
|     return 0; | ||||
|   } | ||||
| } | ||||
| void MemoryManager::Audit(std::string s) | ||||
| { | ||||
|   uint64_t CpuBytes=0; | ||||
|   uint64_t AccBytes=0; | ||||
|   uint64_t LruBytes1=0; | ||||
|   uint64_t LruBytes2=0; | ||||
|   uint64_t LruCnt=0; | ||||
|    | ||||
|   std::cout << " Memory Manager::Audit() from "<<s<<std::endl; | ||||
|   for(auto it=LRU.begin();it!=LRU.end();it++){ | ||||
|     uint64_t cpuPtr = *it; | ||||
|     assert(EntryPresent(cpuPtr)); | ||||
|     auto AccCacheIterator = EntryLookup(cpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     LruBytes2+=AccCache.bytes; | ||||
|     assert(AccCache.LRU_valid==1); | ||||
|     assert(AccCache.LRU_entry==it); | ||||
|   } | ||||
|   std::cout << " Memory Manager::Audit() LRU queue matches table entries "<<std::endl; | ||||
|  | ||||
|   for(auto it=AccViewTable.begin();it!=AccViewTable.end();it++){ | ||||
|     auto &AccCache = it->second; | ||||
|      | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|  | ||||
|     CpuBytes+=AccCache.bytes; | ||||
|     if( AccCache.AccPtr )    AccBytes+=AccCache.bytes; | ||||
|     if( AccCache.LRU_valid ) LruBytes1+=AccCache.bytes; | ||||
|     if( AccCache.LRU_valid ) LruCnt++; | ||||
|      | ||||
|     if ( AccCache.cpuLock || AccCache.accLock ) { | ||||
|       assert(AccCache.LRU_valid==0); | ||||
|  | ||||
|       std::cout << GridLogError << s<< "\n\t 0x"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
| 		<< "\t0x"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
| 		<< "\t cpuLock  " << AccCache.cpuLock | ||||
| 		<< "\t accLock  " << AccCache.accLock | ||||
| 		<< "\t LRUvalid " << AccCache.LRU_valid<<std::endl; | ||||
|     } | ||||
|  | ||||
|     assert( AccCache.cpuLock== 0 ) ; | ||||
|     assert( AccCache.accLock== 0 ) ; | ||||
|   } | ||||
|   std::cout << " Memory Manager::Audit() no locked table entries "<<std::endl; | ||||
|   assert(LruBytes1==LruBytes2); | ||||
|   assert(LruBytes1==DeviceLRUBytes); | ||||
|   std::cout << " Memory Manager::Audit() evictable bytes matches sum over table "<<std::endl; | ||||
|   assert(AccBytes==DeviceBytes); | ||||
|   std::cout << " Memory Manager::Audit() device bytes matches sum over table "<<std::endl; | ||||
|   assert(LruCnt == LRU.size()); | ||||
|   std::cout << " Memory Manager::Audit() LRU entry count matches "<<std::endl; | ||||
|  | ||||
| } | ||||
|  | ||||
| void MemoryManager::PrintState(void* _CpuPtr) | ||||
| { | ||||
|   uint64_t CpuPtr = (uint64_t)_CpuPtr; | ||||
|  | ||||
|   if ( EntryPresent(CpuPtr) ){ | ||||
|     auto AccCacheIterator = EntryLookup(CpuPtr); | ||||
|     auto & AccCache = AccCacheIterator->second; | ||||
|     std::string str; | ||||
|     if ( AccCache.state==Empty    ) str = std::string("Empty"); | ||||
|     if ( AccCache.state==CpuDirty ) str = std::string("CpuDirty"); | ||||
|     if ( AccCache.state==AccDirty ) str = std::string("AccDirty"); | ||||
|     if ( AccCache.state==Consistent)str = std::string("Consistent"); | ||||
|     if ( AccCache.state==EvictNext) str = std::string("EvictNext"); | ||||
|  | ||||
|     std::cout << GridLogMessage << "CpuAddr\t\tAccAddr\t\tState\t\tcpuLock\taccLock\tLRU_valid "<<std::endl; | ||||
|     std::cout << GridLogMessage << "\tx"<<std::hex<<AccCache.CpuPtr<<std::dec | ||||
|     << "\tx"<<std::hex<<AccCache.AccPtr<<std::dec<<"\t" <<str | ||||
|     << "\t" << AccCache.cpuLock | ||||
|     << "\t" << AccCache.accLock | ||||
|     << "\t" << AccCache.LRU_valid<<std::endl; | ||||
|  | ||||
|   } else { | ||||
|     std::cout << GridLogMessage << "No Entry in AccCache table." << std::endl;  | ||||
|   } | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| #endif | ||||
							
								
								
									
										31
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										31
									
								
								Grid/allocator/MemoryManagerShared.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,31 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #ifdef GRID_UVM | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| // View management is 1:1 address space mapping | ||||
| ///////////////////////////////////////////////////////////////////////////////// | ||||
| uint64_t  MemoryManager::DeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceLRUBytes; | ||||
| uint64_t  MemoryManager::DeviceMaxBytes = 1024*1024*128; | ||||
| uint64_t  MemoryManager::HostToDeviceBytes; | ||||
| uint64_t  MemoryManager::DeviceToHostBytes; | ||||
| uint64_t  MemoryManager::HostToDeviceXfer; | ||||
| uint64_t  MemoryManager::DeviceToHostXfer; | ||||
| uint64_t  MemoryManager::DeviceEvictions; | ||||
| uint64_t  MemoryManager::DeviceDestroy; | ||||
|  | ||||
| void  MemoryManager::Audit(std::string s){}; | ||||
| void  MemoryManager::ViewClose(void* AccPtr,ViewMode mode){}; | ||||
| void *MemoryManager::ViewOpen(void* CpuPtr,size_t bytes,ViewMode mode,ViewAdvise hint){ return CpuPtr; }; | ||||
| int   MemoryManager::isOpen   (void* CpuPtr) { return 0;} | ||||
| void  MemoryManager::PrintState(void* CpuPtr) | ||||
| { | ||||
| std::cout << GridLogMessage << "Host<->Device memory movement not currently managed by Grid." << std::endl; | ||||
| }; | ||||
| void  MemoryManager::Print(void){}; | ||||
| void  MemoryManager::PrintAll(void){}; | ||||
| void  MemoryManager::NotifyDeletion(void *ptr){}; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										67
									
								
								Grid/allocator/MemoryStats.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										67
									
								
								Grid/allocator/MemoryStats.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,67 @@ | ||||
| #include <Grid/GridCore.h> | ||||
| #include <fcntl.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| MemoryStats *MemoryProfiler::stats = nullptr; | ||||
| bool         MemoryProfiler::debug = false; | ||||
|  | ||||
| void check_huge_pages(void *Buf,uint64_t BYTES) | ||||
| { | ||||
| #ifdef __linux__ | ||||
|   int fd = open("/proc/self/pagemap", O_RDONLY); | ||||
|   assert(fd >= 0); | ||||
|   const int page_size = 4096; | ||||
|   uint64_t virt_pfn = (uint64_t)Buf / page_size; | ||||
|   off_t offset = sizeof(uint64_t) * virt_pfn; | ||||
|   uint64_t npages = (BYTES + page_size-1) / page_size; | ||||
|   std::vector<uint64_t> pagedata(npages); | ||||
|   uint64_t ret = lseek(fd, offset, SEEK_SET); | ||||
|   assert(ret == offset); | ||||
|   ret = ::read(fd, &pagedata[0], sizeof(uint64_t)*npages); | ||||
|   assert(ret == sizeof(uint64_t) * npages); | ||||
|   int nhugepages = npages / 512; | ||||
|   int n4ktotal, nnothuge; | ||||
|   n4ktotal = 0; | ||||
|   nnothuge = 0; | ||||
|   for (int i = 0; i < nhugepages; ++i) { | ||||
|     uint64_t baseaddr = (pagedata[i*512] & 0x7fffffffffffffULL) * page_size; | ||||
|     for (int j = 0; j < 512; ++j) { | ||||
|       uint64_t pageaddr = (pagedata[i*512+j] & 0x7fffffffffffffULL) * page_size; | ||||
|       ++n4ktotal; | ||||
|       if (pageaddr != baseaddr + j * page_size) | ||||
| 	++nnothuge; | ||||
|     } | ||||
|   } | ||||
|   int rank = CartesianCommunicator::RankWorld(); | ||||
|   printf("rank %d Allocated %d 4k pages, %d not in huge pages\n", rank, n4ktotal, nnothuge); | ||||
| #endif | ||||
| } | ||||
|  | ||||
| std::string sizeString(const size_t bytes) | ||||
| { | ||||
|   constexpr unsigned int bufSize = 256; | ||||
|   const char             *suffixes[7] = {"", "K", "M", "G", "T", "P", "E"}; | ||||
|   char                   buf[256]; | ||||
|   size_t                 s     = 0; | ||||
|   double                 count = bytes; | ||||
|    | ||||
|   while (count >= 1024 && s < 7) | ||||
|     { | ||||
|       s++; | ||||
|       count /= 1024; | ||||
|     } | ||||
|   if (count - floor(count) == 0.0) | ||||
|     { | ||||
|       snprintf(buf, bufSize, "%d %sB", (int)count, suffixes[s]); | ||||
|     } | ||||
|   else | ||||
|     { | ||||
|       snprintf(buf, bufSize, "%.1f %sB", count, suffixes[s]); | ||||
|     } | ||||
|    | ||||
|   return std::string(buf); | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
							
								
								
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										95
									
								
								Grid/allocator/MemoryStats.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,95 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/MemoryStats.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #pragma once | ||||
|  | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| std::string sizeString(size_t bytes); | ||||
|  | ||||
| struct MemoryStats | ||||
| { | ||||
|   size_t totalAllocated{0}, maxAllocated{0},  | ||||
|     currentlyAllocated{0}, totalFreed{0}; | ||||
| }; | ||||
|      | ||||
| class MemoryProfiler | ||||
| { | ||||
| public: | ||||
|   static MemoryStats *stats; | ||||
|   static bool        debug; | ||||
| }; | ||||
|  | ||||
| #define memString(bytes) std::to_string(bytes) + " (" + sizeString(bytes) + ")" | ||||
| #define profilerDebugPrint						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] Stats " << MemoryProfiler::stats << std::endl; \ | ||||
|       std::cout << GridLogDebug << "[Memory debug] total  : " << memString(s->totalAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] max    : " << memString(s->maxAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] current: " << memString(s->currentlyAllocated) \ | ||||
| 		<< std::endl;						\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freed  : " << memString(s->totalFreed) \ | ||||
| 		<< std::endl;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerAllocate(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalAllocated     += (bytes);					\ | ||||
|       s->currentlyAllocated += (bytes);					\ | ||||
|       s->maxAllocated        = std::max(s->maxAllocated, s->currentlyAllocated); \ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] allocating " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| #define profilerFree(bytes)						\ | ||||
|   if (MemoryProfiler::stats)						\ | ||||
|     {									\ | ||||
|       auto s = MemoryProfiler::stats;					\ | ||||
|       s->totalFreed         += (bytes);					\ | ||||
|       s->currentlyAllocated -= (bytes);					\ | ||||
|     }									\ | ||||
|   if (MemoryProfiler::debug)						\ | ||||
|     {									\ | ||||
|       std::cout << GridLogDebug << "[Memory debug] freeing " << memString(bytes) << std::endl; \ | ||||
|       profilerDebugPrint;						\ | ||||
|     } | ||||
|  | ||||
| void check_huge_pages(void *Buf,uint64_t BYTES); | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
| @@ -1,4 +1,4 @@ | ||||
|     /*************************************************************************************
 | ||||
| /*************************************************************************************
 | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| 
 | ||||
| @@ -23,8 +23,8 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
| 
 | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CARTESIAN_H | ||||
| #define GRID_CARTESIAN_H | ||||
| 
 | ||||
							
								
								
									
										292
									
								
								Grid/cartesian/Cartesian_base.h
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										292
									
								
								Grid/cartesian/Cartesian_base.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,292 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/cartesian/Cartesian_base.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
|     Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     Author: paboyle <paboyle@ph.ed.ac.uk> | ||||
|     Author: Guido Cossu <guido.cossu@ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CARTESIAN_BASE_H | ||||
| #define GRID_CARTESIAN_BASE_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| // Commicator provides information on the processor grid | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| //    unsigned long _ndimension; | ||||
| //    Coordinate _processors; // processor grid | ||||
| //    int              _processor;  // linear processor rank | ||||
| //    Coordinate _processor_coor;  // linear processor rank | ||||
| ////////////////////////////////////////////////////////////////////// | ||||
| class GridBase : public CartesianCommunicator , public GridThread { | ||||
|  | ||||
| public: | ||||
|   int dummy; | ||||
|   // Give Lattice access | ||||
|   template<class object> friend class Lattice; | ||||
|  | ||||
|   GridBase(const Coordinate & processor_grid) : CartesianCommunicator(processor_grid) { LocallyPeriodic=0;};  | ||||
|  | ||||
|   GridBase(const Coordinate & processor_grid, | ||||
| 	   const CartesianCommunicator &parent, | ||||
| 	   int &split_rank)  | ||||
|     : CartesianCommunicator(processor_grid,parent,split_rank) {LocallyPeriodic=0;}; | ||||
|  | ||||
|   GridBase(const Coordinate & processor_grid, | ||||
| 	   const CartesianCommunicator &parent)  | ||||
|     : CartesianCommunicator(processor_grid,parent,dummy) {LocallyPeriodic=0;}; | ||||
|  | ||||
|   virtual ~GridBase() = default; | ||||
|  | ||||
|   // Physics Grid information. | ||||
|   Coordinate _simd_layout;// Which dimensions get relayed out over simd lanes. | ||||
|   Coordinate _fdimensions;// (full) Global dimensions of array prior to cb removal | ||||
|   Coordinate _gdimensions;// Global dimensions of array after cb removal | ||||
|   Coordinate _ldimensions;// local dimensions of array with processor images removed | ||||
|   Coordinate _rdimensions;// Reduced local dimensions with simd lane images and processor images removed  | ||||
|   Coordinate _ostride;    // Outer stride for each dimension | ||||
|   Coordinate _istride;    // Inner stride i.e. within simd lane | ||||
|   int _osites;                  // _isites*_osites = product(dimensions). | ||||
|   int _isites; | ||||
|   int64_t _fsites;                  // _isites*_osites = product(dimensions). | ||||
|   int64_t _gsites; | ||||
|   Coordinate _slice_block;// subslice information | ||||
|   Coordinate _slice_stride; | ||||
|   Coordinate _slice_nblock; | ||||
|  | ||||
|   Coordinate _lstart;     // local start of array in gcoors _processor_coor[d]*_ldimensions[d] | ||||
|   Coordinate _lend  ;     // local end of array in gcoors   _processor_coor[d]*_ldimensions[d]+_ldimensions_[d]-1 | ||||
|  | ||||
|   bool _isCheckerBoarded;  | ||||
|   int        LocallyPeriodic; | ||||
|   Coordinate _checker_dim_mask; | ||||
|   int              _checker_dim; | ||||
|  | ||||
| public: | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Checkerboarding interface is virtual and overridden by  | ||||
|   // GridCartesian / GridRedBlackCartesian | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   virtual int CheckerBoarded(int dim) =0; | ||||
|   virtual int CheckerBoard(const Coordinate &site)=0; | ||||
|   virtual int CheckerBoardDestination(int source_cb,int shift,int dim)=0; | ||||
|   virtual int CheckerBoardShift(int source_cb,int dim,int shift,int osite)=0; | ||||
|   virtual int CheckerBoardShiftForCB(int source_cb,int dim,int shift,int cb)=0; | ||||
|   virtual int CheckerBoardFromOindex (int Oindex)=0; | ||||
|   virtual int CheckerBoardFromOindexTable (int Oindex)=0; | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Local layout calculations | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // These routines are key. Subdivide the linearised cartesian index into | ||||
|   //      "inner" index identifying which simd lane of object<vFcomplex> is associated with coord | ||||
|   //      "outer" index identifying which element of _odata in class "Lattice" is associated with coord. | ||||
|   // | ||||
|   // Compared to, say, Blitz++ we simply need to store BOTH an inner stride and an outer | ||||
|   // stride per dimension. The cost of evaluating the indexing information is doubled for an n-dimensional | ||||
|   // coordinate. Note, however, for data parallel operations the "inner" indexing cost is not paid and all | ||||
|   // lanes are operated upon simultaneously. | ||||
|    | ||||
|   virtual int oIndex(Coordinate &coor) | ||||
|   { | ||||
|     int idx=0; | ||||
|     // Works with either global or local coordinates | ||||
|     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*(coor[d]%_rdimensions[d]); | ||||
|     return idx; | ||||
|   } | ||||
|   virtual int iIndex(Coordinate &lcoor) | ||||
|   { | ||||
|     int idx=0; | ||||
|     for(int d=0;d<_ndimension;d++) idx+=_istride[d]*(lcoor[d]/_rdimensions[d]); | ||||
|     return idx; | ||||
|   } | ||||
|   inline int oIndexReduced(Coordinate &ocoor) | ||||
|   { | ||||
|     int idx=0;  | ||||
|     // ocoor is already reduced so can eliminate the modulo operation | ||||
|     // for fast indexing and inline the routine | ||||
|     for(int d=0;d<_ndimension;d++) idx+=_ostride[d]*ocoor[d]; | ||||
|     return idx; | ||||
|   } | ||||
|   inline void oCoorFromOindex (Coordinate& coor,int Oindex){ | ||||
|     Lexicographic::CoorFromIndex(coor,Oindex,_rdimensions); | ||||
|   } | ||||
|  | ||||
|   inline void InOutCoorToLocalCoor (Coordinate &ocoor, Coordinate &icoor, Coordinate &lcoor) { | ||||
|     lcoor.resize(_ndimension); | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       lcoor[d] = ocoor[d] + _rdimensions[d] * icoor[d]; | ||||
|   } | ||||
|  | ||||
|   ////////////////////////////////////////////////////////// | ||||
|   // SIMD lane addressing | ||||
|   ////////////////////////////////////////////////////////// | ||||
|   inline void iCoorFromIindex(Coordinate &coor,int lane) | ||||
|   { | ||||
|     Lexicographic::CoorFromIndex(coor,lane,_simd_layout); | ||||
|   } | ||||
|  | ||||
|   inline int PermuteDim(int dimension){ | ||||
|     return _simd_layout[dimension]>1; | ||||
|   } | ||||
|   inline int PermuteType(int dimension){ | ||||
|     int permute_type=0; | ||||
|     // | ||||
|     // Best way to encode this would be to present a mask  | ||||
|     // for which simd dimensions are rotated, and the rotation | ||||
|     // size. If there is only one simd dimension rotated, this is just  | ||||
|     // a permute.  | ||||
|     // | ||||
|     // Cases: PermuteType == 1,2,4,8 | ||||
|     // Distance should be either 0,1,2.. | ||||
|     // | ||||
|     if ( _simd_layout[dimension] > 2 ) {  | ||||
|       for(int d=0;d<_ndimension;d++){ | ||||
| 	if ( d != dimension ) assert ( (_simd_layout[d]==1)  ); | ||||
|       } | ||||
|       permute_type = RotateBit; // How to specify distance; this is not just direction. | ||||
|       return permute_type; | ||||
|     } | ||||
|  | ||||
|     for(int d=_ndimension-1;d>dimension;d--){ | ||||
|       if (_simd_layout[d]>1 ) permute_type++; | ||||
|     } | ||||
|     return permute_type; | ||||
|   } | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Array sizing queries | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|  | ||||
|   inline int iSites(void) const { return _isites; }; | ||||
|   inline int Nsimd(void)  const { return _isites; };// Synonymous with iSites | ||||
|   inline int oSites(void) const { return _osites; }; | ||||
|   inline int lSites(void) const { return _isites*_osites; };  | ||||
|   inline int64_t gSites(void) const { return (int64_t)_isites*(int64_t)_osites*(int64_t)_Nprocessors; };  | ||||
|   inline int Nd    (void) const { return _ndimension;}; | ||||
|  | ||||
|   inline const Coordinate LocalStarts(void)             { return _lstart;    }; | ||||
|   inline const Coordinate &FullDimensions(void)         { return _fdimensions;}; | ||||
|   inline const Coordinate &GlobalDimensions(void)       { return _gdimensions;}; | ||||
|   inline const Coordinate &LocalDimensions(void)        { return _ldimensions;}; | ||||
|   inline const Coordinate &VirtualLocalDimensions(void) { return _ldimensions;}; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Utility to print the full decomposition details  | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|  | ||||
|   void show_decomposition(){ | ||||
|     std::cout << GridLogMessage << "\tFull Dimensions    : " << _fdimensions << std::endl; | ||||
|     std::cout << GridLogMessage << "\tSIMD layout        : " << _simd_layout << std::endl; | ||||
|     std::cout << GridLogMessage << "\tGlobal Dimensions  : " << _gdimensions << std::endl; | ||||
|     std::cout << GridLogMessage << "\tLocal Dimensions   : " << _ldimensions << std::endl; | ||||
|     std::cout << GridLogMessage << "\tReduced Dimensions : " << _rdimensions << std::endl; | ||||
|     std::cout << GridLogMessage << "\tOuter strides      : " << _ostride << std::endl; | ||||
|     std::cout << GridLogMessage << "\tInner strides      : " << _istride << std::endl; | ||||
|     std::cout << GridLogMessage << "\tiSites             : " << _isites << std::endl; | ||||
|     std::cout << GridLogMessage << "\toSites             : " << _osites << std::endl; | ||||
|     std::cout << GridLogMessage << "\tlSites             : " << lSites() << std::endl;         | ||||
|     std::cout << GridLogMessage << "\tgSites             : " << gSites() << std::endl; | ||||
|     std::cout << GridLogMessage << "\tNd                 : " << _ndimension << std::endl;              | ||||
|   }  | ||||
|  | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Global addressing | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   void GlobalIndexToGlobalCoor(int64_t gidx,Coordinate &gcoor){ | ||||
|     assert(gidx< gSites()); | ||||
|     Lexicographic::CoorFromIndex(gcoor,gidx,_gdimensions); | ||||
|   } | ||||
|   void LocalIndexToLocalCoor(int lidx,Coordinate &lcoor){ | ||||
|     assert(lidx<lSites()); | ||||
|     Lexicographic::CoorFromIndex(lcoor,lidx,_ldimensions); | ||||
|   } | ||||
|   void GlobalCoorToGlobalIndex(const Coordinate & gcoor,int64_t & gidx){ | ||||
|     gidx=0; | ||||
|     int mult=1; | ||||
|     for(int mu=0;mu<_ndimension;mu++) { | ||||
|       gidx+=mult*gcoor[mu]; | ||||
|       mult*=_gdimensions[mu]; | ||||
|     } | ||||
|   } | ||||
|   void GlobalCoorToProcessorCoorLocalCoor(Coordinate &pcoor,Coordinate &lcoor,const Coordinate &gcoor) | ||||
|   { | ||||
|     pcoor.resize(_ndimension); | ||||
|     lcoor.resize(_ndimension); | ||||
|     for(int mu=0;mu<_ndimension;mu++){ | ||||
|       int _fld  = _fdimensions[mu]/_processors[mu]; | ||||
|       pcoor[mu] = gcoor[mu]/_fld; | ||||
|       lcoor[mu] = gcoor[mu]%_fld; | ||||
|     } | ||||
|   } | ||||
|   void GlobalCoorToRankIndex(int &rank, int &o_idx, int &i_idx ,const Coordinate &gcoor) | ||||
|   { | ||||
|     Coordinate pcoor; | ||||
|     Coordinate lcoor; | ||||
|     GlobalCoorToProcessorCoorLocalCoor(pcoor,lcoor,gcoor); | ||||
|     rank = RankFromProcessorCoor(pcoor); | ||||
|     /* | ||||
|       Coordinate cblcoor(lcoor); | ||||
|       for(int d=0;d<cblcoor.size();d++){ | ||||
|       if( this->CheckerBoarded(d) ) { | ||||
|       cblcoor[d] = lcoor[d]/2; | ||||
|       } | ||||
|       } | ||||
|     */ | ||||
|     i_idx= iIndex(lcoor); | ||||
|     o_idx= oIndex(lcoor); | ||||
|   } | ||||
|  | ||||
|   void RankIndexToGlobalCoor(int rank, int o_idx, int i_idx , Coordinate &gcoor) | ||||
|   { | ||||
|     gcoor.resize(_ndimension); | ||||
|     Coordinate coor(_ndimension); | ||||
|  | ||||
|     ProcessorCoorFromRank(rank,coor); | ||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = _ldimensions[mu]*coor[mu]; | ||||
|  | ||||
|     iCoorFromIindex(coor,i_idx); | ||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] += _rdimensions[mu]*coor[mu]; | ||||
|  | ||||
|     oCoorFromOindex (coor,o_idx); | ||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] += coor[mu]; | ||||
|        | ||||
|   } | ||||
|   void RankIndexCbToFullGlobalCoor(int rank, int o_idx, int i_idx, int cb,Coordinate &fcoor) | ||||
|   { | ||||
|     RankIndexToGlobalCoor(rank,o_idx,i_idx ,fcoor); | ||||
|     if(CheckerBoarded(0)){ | ||||
|       fcoor[0] = fcoor[0]*2+cb; | ||||
|     } | ||||
|   } | ||||
|   void ProcessorCoorLocalCoorToGlobalCoor(Coordinate &Pcoor,Coordinate &Lcoor,Coordinate &gcoor) | ||||
|   { | ||||
|     gcoor.resize(_ndimension); | ||||
|     for(int mu=0;mu<_ndimension;mu++) gcoor[mu] = Pcoor[mu]*_ldimensions[mu]+Lcoor[mu]; | ||||
|   } | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
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								Grid/cartesian/Cartesian_full.h
									
									
									
									
									
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										179
									
								
								Grid/cartesian/Cartesian_full.h
									
									
									
									
									
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							| @@ -0,0 +1,179 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/cartesian/Cartesian_full.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CARTESIAN_FULL_H | ||||
| #define GRID_CARTESIAN_FULL_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|      | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Grid Support. | ||||
| ///////////////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| class GridCartesian: public GridBase { | ||||
|  | ||||
| public: | ||||
|   int dummy; | ||||
|   //  Coordinate _checker_dim_mask; | ||||
|   virtual int  CheckerBoardFromOindexTable (int Oindex) { | ||||
|     return 0; | ||||
|   } | ||||
|   virtual int  CheckerBoardFromOindex (int Oindex) | ||||
|   { | ||||
|     return 0; | ||||
|   } | ||||
|   virtual int CheckerBoarded(int dim) { | ||||
|     return 0; | ||||
|   } | ||||
|   virtual int CheckerBoard(const Coordinate &site){ | ||||
|     return 0; | ||||
|   } | ||||
|   virtual int CheckerBoardDestination(int cb,int shift,int dim){ | ||||
|     return 0; | ||||
|   } | ||||
|   virtual int CheckerBoardShiftForCB(int source_cb,int dim,int shift, int ocb){ | ||||
|     return shift; | ||||
|   } | ||||
|   virtual int CheckerBoardShift(int source_cb,int dim,int shift, int osite){ | ||||
|     return shift; | ||||
|   } | ||||
|   ///////////////////////////////////////////////////////////////////////// | ||||
|   // Constructor takes a parent grid and possibly subdivides communicator. | ||||
|   ///////////////////////////////////////////////////////////////////////// | ||||
|   GridCartesian(const Coordinate &dimensions, | ||||
| 		const Coordinate &simd_layout, | ||||
| 		const Coordinate &processor_grid, | ||||
| 		const GridCartesian &parent) : GridBase(processor_grid,parent,dummy) | ||||
|   { | ||||
|     Init(dimensions,simd_layout,processor_grid); | ||||
|   } | ||||
|   GridCartesian(const Coordinate &dimensions, | ||||
| 		const Coordinate &simd_layout, | ||||
| 		const Coordinate &processor_grid, | ||||
| 		const GridCartesian &parent,int &split_rank) : GridBase(processor_grid,parent,split_rank) | ||||
|   { | ||||
|     Init(dimensions,simd_layout,processor_grid); | ||||
|   } | ||||
|   ///////////////////////////////////////////////////////////////////////// | ||||
|   // Construct from comm world | ||||
|   ///////////////////////////////////////////////////////////////////////// | ||||
|   GridCartesian(const Coordinate &dimensions, | ||||
| 		const Coordinate &simd_layout, | ||||
| 		const Coordinate &processor_grid) : GridBase(processor_grid) | ||||
|   { | ||||
|     Init(dimensions,simd_layout,processor_grid); | ||||
|   } | ||||
|  | ||||
|   virtual ~GridCartesian() = default; | ||||
|  | ||||
|   void Init(const Coordinate &dimensions, | ||||
| 	    const Coordinate &simd_layout, | ||||
| 	    const Coordinate &processor_grid) | ||||
|   { | ||||
|     /////////////////////// | ||||
|     // Grid information | ||||
|     /////////////////////// | ||||
|       _isCheckerBoarded = false; | ||||
|     _ndimension = dimensions.size(); | ||||
|  | ||||
|     _fdimensions.resize(_ndimension); | ||||
|     _gdimensions.resize(_ndimension); | ||||
|     _ldimensions.resize(_ndimension); | ||||
|     _rdimensions.resize(_ndimension); | ||||
|     _simd_layout.resize(_ndimension); | ||||
|     _checker_dim_mask.resize(_ndimension);; | ||||
|     _checker_dim = -1; | ||||
|     _lstart.resize(_ndimension); | ||||
|     _lend.resize(_ndimension); | ||||
|  | ||||
|     _ostride.resize(_ndimension); | ||||
|     _istride.resize(_ndimension); | ||||
|  | ||||
|     _fsites = _gsites = _osites = _isites = 1; | ||||
|  | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
| 	_checker_dim_mask[d]=0; | ||||
|  | ||||
|         _fdimensions[d] = dimensions[d];   // Global dimensions | ||||
|         _gdimensions[d] = _fdimensions[d]; // Global dimensions | ||||
|         _simd_layout[d] = simd_layout[d]; | ||||
|         _fsites = _fsites * _fdimensions[d]; | ||||
|         _gsites = _gsites * _gdimensions[d]; | ||||
|  | ||||
|         // Use a reduced simd grid | ||||
|         _ldimensions[d] = _gdimensions[d] / _processors[d]; //local dimensions | ||||
|         //std::cout << _ldimensions[d] << "  " << _gdimensions[d] << "  " << _processors[d] << std::endl; | ||||
|         assert(_ldimensions[d] * _processors[d] == _gdimensions[d]); | ||||
|  | ||||
|         _rdimensions[d] = _ldimensions[d] / _simd_layout[d]; //overdecomposition | ||||
|         assert(_rdimensions[d] * _simd_layout[d] == _ldimensions[d]); | ||||
|  | ||||
|         _lstart[d] = _processor_coor[d] * _ldimensions[d]; | ||||
|         _lend[d] = _processor_coor[d] * _ldimensions[d] + _ldimensions[d] - 1; | ||||
|         _osites *= _rdimensions[d]; | ||||
|         _isites *= _simd_layout[d]; | ||||
|  | ||||
|         // Addressing support | ||||
|         if (d == 0) | ||||
| 	  { | ||||
| 	    _ostride[d] = 1; | ||||
| 	    _istride[d] = 1; | ||||
| 	  } | ||||
|         else | ||||
| 	  { | ||||
| 	    _ostride[d] = _ostride[d - 1] * _rdimensions[d - 1]; | ||||
| 	    _istride[d] = _istride[d - 1] * _simd_layout[d - 1]; | ||||
| 	  } | ||||
|       } | ||||
|  | ||||
|     /////////////////////// | ||||
|     // subplane information | ||||
|     /////////////////////// | ||||
|     _slice_block.resize(_ndimension); | ||||
|     _slice_stride.resize(_ndimension); | ||||
|     _slice_nblock.resize(_ndimension); | ||||
|  | ||||
|     int block = 1; | ||||
|     int nblock = 1; | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       nblock *= _rdimensions[d]; | ||||
|  | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         nblock /= _rdimensions[d]; | ||||
|         _slice_block[d] = block; | ||||
|         _slice_stride[d] = _ostride[d] * _rdimensions[d]; | ||||
|         _slice_nblock[d] = nblock; | ||||
|         block = block * _rdimensions[d]; | ||||
|       } | ||||
|   }; | ||||
|  | ||||
| }; | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
							
								
								
									
										306
									
								
								Grid/cartesian/Cartesian_red_black.h
									
									
									
									
									
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										306
									
								
								Grid/cartesian/Cartesian_red_black.h
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,306 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/cartesian/Cartesian_red_black.h | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Azusa Yamaguchi <ayamaguc@staffmail.ed.ac.uk> | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_CARTESIAN_RED_BLACK_H | ||||
| #define GRID_CARTESIAN_RED_BLACK_H | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| static const int CbRed  =0; | ||||
| static const int CbBlack=1; | ||||
| static const int Even   =CbRed; | ||||
| static const int Odd    =CbBlack; | ||||
|  | ||||
| accelerator_inline int RedBlackCheckerBoardFromOindex (int oindex,const Coordinate &rdim,const Coordinate &chk_dim_msk) | ||||
| { | ||||
|   int nd=rdim.size(); | ||||
|   Coordinate coor(nd); | ||||
|  | ||||
|   Lexicographic::CoorFromIndex(coor,oindex,rdim); | ||||
|  | ||||
|   int linear=0; | ||||
|   for(int d=0;d<nd;d++){ | ||||
|     if(chk_dim_msk[d]) | ||||
|       linear=linear+coor[d]; | ||||
|   } | ||||
|   return (linear&0x1); | ||||
| } | ||||
|  | ||||
|      | ||||
| // Specialise this for red black grids storing half the data like a chess board. | ||||
| class GridRedBlackCartesian : public GridBase | ||||
| { | ||||
| public: | ||||
|   //  Coordinate _checker_dim_mask; | ||||
|   //  int              _checker_dim; | ||||
|   std::vector<int> _checker_board; | ||||
|  | ||||
|   virtual int isCheckerBoarded(void) const { return 1; }; | ||||
|   virtual int CheckerBoarded(int dim){ | ||||
|     if( dim==_checker_dim) return 1; | ||||
|     else return 0; | ||||
|   } | ||||
|   virtual int CheckerBoard(const Coordinate &site){ | ||||
|     int linear=0; | ||||
|     assert(site.size()==_ndimension); | ||||
|     for(int d=0;d<_ndimension;d++){  | ||||
|       if(_checker_dim_mask[d]) | ||||
| 	linear=linear+site[d]; | ||||
|     } | ||||
|     return (linear&0x1); | ||||
|   } | ||||
|  | ||||
|   // Depending on the cb of site, we toggle source cb. | ||||
|   // for block #b, element #e = (b, e) | ||||
|   // we need  | ||||
|   virtual int CheckerBoardShiftForCB(int source_cb,int dim,int shift,int ocb){ | ||||
|     if(dim != _checker_dim) return shift; | ||||
|  | ||||
|     int fulldim =_fdimensions[dim]; | ||||
|     shift = (shift+fulldim)%fulldim; | ||||
|  | ||||
|     // Probably faster with table lookup; | ||||
|     // or by looping over x,y,z and multiply rather than computing checkerboard. | ||||
| 	   | ||||
|     if ( (source_cb+ocb)&1 ) { | ||||
|       return (shift)/2; | ||||
|     } else { | ||||
|       return (shift+1)/2; | ||||
|     } | ||||
|   } | ||||
|   virtual int  CheckerBoardFromOindexTable (int Oindex) { | ||||
|     return _checker_board[Oindex]; | ||||
|   } | ||||
|   virtual int  CheckerBoardFromOindex (int Oindex) | ||||
|   { | ||||
|     Coordinate ocoor; | ||||
|     oCoorFromOindex(ocoor,Oindex); | ||||
|     return CheckerBoard(ocoor); | ||||
|   } | ||||
|   virtual int CheckerBoardShift(int source_cb,int dim,int shift,int osite){ | ||||
|  | ||||
|     if(dim != _checker_dim) return shift; | ||||
|  | ||||
|     int ocb=CheckerBoardFromOindex(osite); | ||||
|        | ||||
|     return CheckerBoardShiftForCB(source_cb,dim,shift,ocb); | ||||
|   } | ||||
|      | ||||
|   virtual int CheckerBoardDestination(int source_cb,int shift,int dim){ | ||||
|     if ( _checker_dim_mask[dim]  ) { | ||||
|       // If _fdimensions[checker_dim] is odd, then shifting by 1 in other dims | ||||
|       // does NOT cause a parity hop. | ||||
|       int add=(dim==_checker_dim) ? 0 : _fdimensions[_checker_dim]; | ||||
|       if ( (shift+add) &0x1) { | ||||
| 	return 1-source_cb; | ||||
|       } else { | ||||
| 	return source_cb; | ||||
|       } | ||||
|     } else { | ||||
|       return source_cb; | ||||
|  | ||||
|     } | ||||
|   }; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   // Create Redblack from original grid; require full grid pointer ? | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   GridRedBlackCartesian(const GridBase *base) : GridBase(base->_processors,*base) | ||||
|   { | ||||
|     int dims = base->_ndimension; | ||||
|     Coordinate checker_dim_mask(dims,1); | ||||
|     int checker_dim = 0; | ||||
|     Init(base->_fdimensions,base->_simd_layout,base->_processors,checker_dim_mask,checker_dim); | ||||
|   }; | ||||
|  | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   // Create redblack from original grid, with non-trivial checker dim mask | ||||
|   //////////////////////////////////////////////////////////// | ||||
|   GridRedBlackCartesian(const GridBase *base, | ||||
| 			const Coordinate &checker_dim_mask, | ||||
| 			int checker_dim | ||||
| 			) :  GridBase(base->_processors,*base)  | ||||
|   { | ||||
|     Init(base->_fdimensions,base->_simd_layout,base->_processors,checker_dim_mask,checker_dim)  ; | ||||
|   } | ||||
|    | ||||
|   virtual ~GridRedBlackCartesian() = default; | ||||
|  | ||||
|   void Init(const Coordinate &dimensions, | ||||
| 	    const Coordinate &simd_layout, | ||||
| 	    const Coordinate &processor_grid, | ||||
| 	    const Coordinate &checker_dim_mask, | ||||
| 	    int checker_dim) | ||||
|   { | ||||
|  | ||||
|       _isCheckerBoarded = true; | ||||
|     _checker_dim = checker_dim; | ||||
|     assert(checker_dim_mask[checker_dim] == 1); | ||||
|     _ndimension = dimensions.size(); | ||||
|     assert(checker_dim_mask.size() == _ndimension); | ||||
|     assert(processor_grid.size() == _ndimension); | ||||
|     assert(simd_layout.size() == _ndimension); | ||||
|  | ||||
|     _fdimensions.resize(_ndimension); | ||||
|     _gdimensions.resize(_ndimension); | ||||
|     _ldimensions.resize(_ndimension); | ||||
|     _rdimensions.resize(_ndimension); | ||||
|     _simd_layout.resize(_ndimension); | ||||
|     _lstart.resize(_ndimension); | ||||
|     _lend.resize(_ndimension); | ||||
|  | ||||
|     _ostride.resize(_ndimension); | ||||
|     _istride.resize(_ndimension); | ||||
|  | ||||
|     _fsites = _gsites = _osites = _isites = 1; | ||||
|  | ||||
|     _checker_dim_mask = checker_dim_mask; | ||||
|  | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         _fdimensions[d] = dimensions[d]; | ||||
|         _gdimensions[d] = _fdimensions[d]; | ||||
|         _fsites = _fsites * _fdimensions[d]; | ||||
|         _gsites = _gsites * _gdimensions[d]; | ||||
|  | ||||
|         if (d == _checker_dim) | ||||
| 	  { | ||||
| 	    assert((_gdimensions[d] & 0x1) == 0); | ||||
| 	    _gdimensions[d] = _gdimensions[d] / 2; // Remove a checkerboard | ||||
| 	    _gsites /= 2; | ||||
| 	  } | ||||
|         _ldimensions[d] = _gdimensions[d] / _processors[d]; | ||||
|         assert(_ldimensions[d] * _processors[d] == _gdimensions[d]); | ||||
|         _lstart[d] = _processor_coor[d] * _ldimensions[d]; | ||||
|         _lend[d] = _processor_coor[d] * _ldimensions[d] + _ldimensions[d] - 1; | ||||
|  | ||||
|         // Use a reduced simd grid | ||||
|         _simd_layout[d] = simd_layout[d]; | ||||
|         _rdimensions[d] = _ldimensions[d] / _simd_layout[d]; // this is not checking if this is integer | ||||
|         assert(_rdimensions[d] * _simd_layout[d] == _ldimensions[d]); | ||||
|         assert(_rdimensions[d] > 0); | ||||
|  | ||||
|         // all elements of a simd vector must have same checkerboard. | ||||
|         // If Ls vectorised, this must still be the case; e.g. dwf rb5d | ||||
|         if (_simd_layout[d] > 1) | ||||
| 	  { | ||||
| 	    if (checker_dim_mask[d]) | ||||
| 	      { | ||||
| 		assert((_rdimensions[d] & 0x1) == 0); | ||||
| 	      } | ||||
| 	  } | ||||
|  | ||||
|         _osites *= _rdimensions[d]; | ||||
|         _isites *= _simd_layout[d]; | ||||
|  | ||||
|         // Addressing support | ||||
|         if (d == 0) | ||||
| 	  { | ||||
| 	    _ostride[d] = 1; | ||||
| 	    _istride[d] = 1; | ||||
| 	  } | ||||
|         else | ||||
| 	  { | ||||
| 	    _ostride[d] = _ostride[d - 1] * _rdimensions[d - 1]; | ||||
| 	    _istride[d] = _istride[d - 1] * _simd_layout[d - 1]; | ||||
| 	  } | ||||
|       } | ||||
|  | ||||
|     //////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     // subplane information | ||||
|     //////////////////////////////////////////////////////////////////////////////////////////// | ||||
|     _slice_block.resize(_ndimension); | ||||
|     _slice_stride.resize(_ndimension); | ||||
|     _slice_nblock.resize(_ndimension); | ||||
|  | ||||
|     int block = 1; | ||||
|     int nblock = 1; | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       nblock *= _rdimensions[d]; | ||||
|  | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         nblock /= _rdimensions[d]; | ||||
|         _slice_block[d] = block; | ||||
|         _slice_stride[d] = _ostride[d] * _rdimensions[d]; | ||||
|         _slice_nblock[d] = nblock; | ||||
|         block = block * _rdimensions[d]; | ||||
|       } | ||||
|  | ||||
|     //////////////////////////////////////////////// | ||||
|     // Create a checkerboard lookup table | ||||
|     //////////////////////////////////////////////// | ||||
|     int rvol = 1; | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         rvol = rvol * _rdimensions[d]; | ||||
|       } | ||||
|     _checker_board.resize(rvol); | ||||
|     for (int osite = 0; osite < _osites; osite++) | ||||
|       { | ||||
|         _checker_board[osite] = CheckerBoardFromOindex(osite); | ||||
|       } | ||||
|   }; | ||||
|  | ||||
| protected: | ||||
|   virtual int oIndex(Coordinate &coor) | ||||
|   { | ||||
|     int idx = 0; | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         if (d == _checker_dim) | ||||
| 	  { | ||||
| 	    idx += _ostride[d] * ((coor[d] / 2) % _rdimensions[d]); | ||||
| 	  } | ||||
|         else | ||||
| 	  { | ||||
| 	    idx += _ostride[d] * (coor[d] % _rdimensions[d]); | ||||
| 	  } | ||||
|       } | ||||
|     return idx; | ||||
|   }; | ||||
|  | ||||
|   virtual int iIndex(Coordinate &lcoor) | ||||
|   { | ||||
|     int idx = 0; | ||||
|     for (int d = 0; d < _ndimension; d++) | ||||
|       { | ||||
|         if (d == _checker_dim) | ||||
| 	  { | ||||
| 	    idx += _istride[d] * (lcoor[d] / (2 * _rdimensions[d])); | ||||
| 	  } | ||||
|         else | ||||
| 	  { | ||||
| 	    idx += _istride[d] * (lcoor[d] / _rdimensions[d]); | ||||
| 	  } | ||||
|       } | ||||
|     return idx; | ||||
|   } | ||||
| }; | ||||
| NAMESPACE_END(Grid); | ||||
| #endif | ||||
| @@ -1,4 +1,4 @@ | ||||
|     /*************************************************************************************
 | ||||
| /*************************************************************************************
 | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| 
 | ||||
| @@ -23,11 +23,13 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
| 
 | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_COMMUNICATOR_H | ||||
| #define GRID_COMMUNICATOR_H | ||||
| 
 | ||||
| #include <Grid/util/Coordinate.h> | ||||
| #include <Grid/communicator/SharedMemory.h> | ||||
| #include <Grid/communicator/Communicator_base.h> | ||||
| 
 | ||||
| #endif | ||||
							
								
								
									
										90
									
								
								Grid/communicator/Communicator_base.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										90
									
								
								Grid/communicator/Communicator_base.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,90 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/communicator/Communicator_none.cc | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #include <Grid/GridCore.h> | ||||
| #include <fcntl.h> | ||||
| #include <unistd.h> | ||||
| #include <limits.h> | ||||
| #include <sys/mman.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| bool Stencil_force_mpi = true; | ||||
|  | ||||
| /////////////////////////////////////////////////////////////// | ||||
| // Info that is setup once and indept of cartesian layout | ||||
| /////////////////////////////////////////////////////////////// | ||||
| CartesianCommunicator::CommunicatorPolicy_t   | ||||
| CartesianCommunicator::CommunicatorPolicy= CartesianCommunicator::CommunicatorPolicyConcurrent; | ||||
| int CartesianCommunicator::nCommThreads = -1; | ||||
|  | ||||
| ///////////////////////////////// | ||||
| // Grid information queries | ||||
| ///////////////////////////////// | ||||
| int                      CartesianCommunicator::Dimensions(void)        { return _ndimension; }; | ||||
| int                      CartesianCommunicator::IsBoss(void)            { return _processor==0; }; | ||||
| int                      CartesianCommunicator::BossRank(void)          { return 0; }; | ||||
| int                      CartesianCommunicator::ThisRank(void)          { return _processor; }; | ||||
| const Coordinate & CartesianCommunicator::ThisProcessorCoor(void) { return _processor_coor; }; | ||||
| const Coordinate & CartesianCommunicator::ProcessorGrid(void)     { return _processors; }; | ||||
| int                      CartesianCommunicator::ProcessorCount(void)    { return _Nprocessors; }; | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
| // very VERY rarely (Log, serial RNG) we need world without a grid | ||||
| //////////////////////////////////////////////////////////////////////////////// | ||||
|  | ||||
| #ifdef USE_GRID_REDUCTION | ||||
| void CartesianCommunicator::GlobalSum(ComplexF &c) | ||||
| { | ||||
|   GlobalSumP2P(c); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(ComplexD &c) | ||||
| { | ||||
|   GlobalSumP2P(c); | ||||
| } | ||||
| #else | ||||
| void CartesianCommunicator::GlobalSum(ComplexF &c) | ||||
| { | ||||
|   GlobalSumVector((float *)&c,2); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(ComplexD &c) | ||||
| { | ||||
|   GlobalSumVector((double *)&c,2); | ||||
| } | ||||
| #endif | ||||
| void CartesianCommunicator::GlobalSumVector(ComplexF *c,int N) | ||||
| { | ||||
|   GlobalSumVector((float *)c,2*N); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSumVector(ComplexD *c,int N) | ||||
| { | ||||
|   GlobalSumVector((double *)c,2*N); | ||||
| } | ||||
|    | ||||
| NAMESPACE_END(Grid); | ||||
|  | ||||
|  | ||||
| @@ -1,5 +1,4 @@ | ||||
| 
 | ||||
|     /*************************************************************************************
 | ||||
| /*************************************************************************************
 | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| 
 | ||||
| @@ -24,124 +23,44 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
| 
 | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #ifndef GRID_COMMUNICATOR_BASE_H | ||||
| #define GRID_COMMUNICATOR_BASE_H | ||||
| 
 | ||||
| ///////////////////////////////////
 | ||||
| // Processor layout information
 | ||||
| ///////////////////////////////////
 | ||||
| #ifdef GRID_COMMS_MPI | ||||
| #include <mpi.h> | ||||
| #endif | ||||
| #ifdef GRID_COMMS_MPI3 | ||||
| #include <mpi.h> | ||||
| #endif | ||||
| #ifdef GRID_COMMS_MPIT | ||||
| #include <mpi.h> | ||||
| #endif | ||||
| #ifdef GRID_COMMS_SHMEM | ||||
| #include <mpp/shmem.h> | ||||
| #endif | ||||
| #include <Grid/communicator/SharedMemory.h> | ||||
| 
 | ||||
| namespace Grid { | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| class CartesianCommunicator { | ||||
|   public:     | ||||
| extern bool Stencil_force_mpi ; | ||||
| 
 | ||||
| class CartesianCommunicator : public SharedMemory { | ||||
| 
 | ||||
| public:     | ||||
| 
 | ||||
|   ////////////////////////////////////////////
 | ||||
|   // Isend/Irecv/Wait, or Sendrecv blocking
 | ||||
|   // Policies
 | ||||
|   ////////////////////////////////////////////
 | ||||
|   enum CommunicatorPolicy_t { CommunicatorPolicyConcurrent, CommunicatorPolicySequential }; | ||||
|   static CommunicatorPolicy_t CommunicatorPolicy; | ||||
|   static void SetCommunicatorPolicy(CommunicatorPolicy_t policy ) { CommunicatorPolicy = policy; } | ||||
| 
 | ||||
|   ///////////////////////////////////////////
 | ||||
|   // Up to 65536 ranks per node adequate for now
 | ||||
|   // 128MB shared memory for comms enought for 48^4 local vol comms
 | ||||
|   // Give external control (command line override?) of this
 | ||||
|   ///////////////////////////////////////////
 | ||||
|   static const int MAXLOG2RANKSPERNODE = 16;             | ||||
|   static uint64_t  MAX_MPI_SHM_BYTES; | ||||
|   static int       nCommThreads; | ||||
|   // use explicit huge pages
 | ||||
|   static int       Hugepages; | ||||
| 
 | ||||
|   ////////////////////////////////////////////
 | ||||
|   // Communicator should know nothing of the physics grid, only processor grid.
 | ||||
|   ////////////////////////////////////////////
 | ||||
|   int              _Nprocessors;     // How many in all
 | ||||
|   std::vector<int> _processors;      // Which dimensions get relayed out over processors lanes.
 | ||||
|   int              _processor;       // linear processor rank
 | ||||
|   std::vector<int> _processor_coor;  // linear processor coordinate
 | ||||
|   unsigned long    _ndimension; | ||||
| 
 | ||||
| #if defined (GRID_COMMS_MPI) || defined (GRID_COMMS_MPI3) || defined (GRID_COMMS_MPIT) | ||||
|   static MPI_Comm communicator_world; | ||||
| 
 | ||||
|   MPI_Comm              communicator; | ||||
|   std::vector<MPI_Comm> communicator_halo; | ||||
| 
 | ||||
|   typedef MPI_Request CommsRequest_t; | ||||
| #else  | ||||
|   typedef int CommsRequest_t; | ||||
| #endif | ||||
| 
 | ||||
| 
 | ||||
|   ////////////////////////////////////////////////////////////////////
 | ||||
|   // Helper functionality for SHM Windows common to all other impls
 | ||||
|   ////////////////////////////////////////////////////////////////////
 | ||||
|   // Longer term; drop this in favour of a master / slave model with 
 | ||||
|   // cartesian communicator on a subset of ranks, slave ranks controlled
 | ||||
|   // by group leader with data xfer via shared memory
 | ||||
|   ////////////////////////////////////////////////////////////////////
 | ||||
| #ifdef GRID_COMMS_MPI3 | ||||
| 
 | ||||
|   static int ShmRank; | ||||
|   static int ShmSize; | ||||
|   static int GroupRank; | ||||
|   static int GroupSize; | ||||
|   static int WorldRank; | ||||
|   static int WorldSize; | ||||
| 
 | ||||
|   std::vector<int>  WorldDims; | ||||
|   std::vector<int>  GroupDims; | ||||
|   std::vector<int>  ShmDims; | ||||
|    | ||||
|   std::vector<int> GroupCoor; | ||||
|   std::vector<int> ShmCoor; | ||||
|   std::vector<int> WorldCoor; | ||||
| 
 | ||||
|   static std::vector<int> GroupRanks;  | ||||
|   static std::vector<int> MyGroup; | ||||
|   static int ShmSetup; | ||||
|   static MPI_Win ShmWindow;  | ||||
|   static MPI_Comm ShmComm; | ||||
|    | ||||
|   std::vector<int>  LexicographicToWorldRank; | ||||
|    | ||||
|   static std::vector<void *> ShmCommBufs; | ||||
| 
 | ||||
| #else  | ||||
|   static void ShmInitGeneric(void); | ||||
|   static commVector<uint8_t> ShmBufStorageVector; | ||||
| #endif  | ||||
| 
 | ||||
|   /////////////////////////////////
 | ||||
|   // Grid information and queries
 | ||||
|   // Implemented in Communicator_base.C
 | ||||
|   /////////////////////////////////
 | ||||
|   static void * ShmCommBuf; | ||||
| 
 | ||||
|    | ||||
|   size_t heap_top; | ||||
|   size_t heap_bytes; | ||||
| 
 | ||||
|   void *ShmBufferSelf(void); | ||||
|   void *ShmBuffer(int rank); | ||||
|   void *ShmBufferTranslate(int rank,void * local_p); | ||||
|   void *ShmBufferMalloc(size_t bytes); | ||||
|   void ShmBufferFreeAll(void) ; | ||||
|   Coordinate _shm_processors;  // Which dimensions get relayed out over processors lanes.
 | ||||
|   Coordinate _processors;      // Which dimensions get relayed out over processors lanes.
 | ||||
|   Coordinate _processor_coor;  // linear processor coordinate
 | ||||
|   static Grid_MPI_Comm      communicator_world; | ||||
|   Grid_MPI_Comm             communicator; | ||||
|   std::vector<Grid_MPI_Comm> communicator_halo; | ||||
|    | ||||
|   ////////////////////////////////////////////////
 | ||||
|   // Must call in Grid startup
 | ||||
| @@ -149,42 +68,59 @@ class CartesianCommunicator { | ||||
|   static void Init(int *argc, char ***argv); | ||||
| 
 | ||||
|   ////////////////////////////////////////////////
 | ||||
|   // Constructor of any given grid
 | ||||
|   // Constructors to sub-divide a parent communicator
 | ||||
|   // and default to comm world
 | ||||
|   ////////////////////////////////////////////////
 | ||||
|   CartesianCommunicator(const std::vector<int> &pdimensions_in); | ||||
|   CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank); | ||||
|   CartesianCommunicator(const Coordinate &pdimensions_in); | ||||
|   virtual ~CartesianCommunicator(); | ||||
| 
 | ||||
| private: | ||||
| 
 | ||||
|   ////////////////////////////////////////////////
 | ||||
|   // Private initialise from an MPI communicator
 | ||||
|   // Can use after an MPI_Comm_split, but hidden from user so private
 | ||||
|   ////////////////////////////////////////////////
 | ||||
|   void InitFromMPICommunicator(const Coordinate &processors, Grid_MPI_Comm communicator_base); | ||||
| 
 | ||||
| public: | ||||
|    | ||||
|    | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // Wraps MPI_Cart routines, or implements equivalent on other impls
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////
 | ||||
|   void ShiftedRanks(int dim,int shift,int & source, int & dest); | ||||
|   int  RankFromProcessorCoor(std::vector<int> &coor); | ||||
|   void ProcessorCoorFromRank(int rank,std::vector<int> &coor); | ||||
|   int  RankFromProcessorCoor(Coordinate &coor); | ||||
|   void ProcessorCoorFromRank(int rank,Coordinate &coor); | ||||
|    | ||||
|   int                      Dimensions(void)        ; | ||||
|   int                      IsBoss(void)            ; | ||||
|   int                      BossRank(void)          ; | ||||
|   int                      ThisRank(void)          ; | ||||
|   const std::vector<int> & ThisProcessorCoor(void) ; | ||||
|   const std::vector<int> & ProcessorGrid(void)     ; | ||||
|   const Coordinate & ThisProcessorCoor(void) ; | ||||
|   const Coordinate & ShmGrid(void)  { return _shm_processors; }  ; | ||||
|   const Coordinate & ProcessorGrid(void)     ; | ||||
|   int                ProcessorCount(void)    ; | ||||
|   int                      NodeCount(void)    ; | ||||
|   int                      RankCount(void)    ; | ||||
| 
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////
 | ||||
|   // very VERY rarely (Log, serial RNG) we need world without a grid
 | ||||
|   ////////////////////////////////////////////////////////////////////////////////
 | ||||
|   static int  RankWorld(void) ; | ||||
|   static void BroadcastWorld(int root,void* data, int bytes); | ||||
|   static void BarrierWorld(void); | ||||
|    | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   // Reduction
 | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   void GlobalMax(RealD &); | ||||
|   void GlobalMax(RealF &); | ||||
|   void GlobalSum(RealF &); | ||||
|   void GlobalSumVector(RealF *,int N); | ||||
|   void GlobalSum(RealD &); | ||||
|   void GlobalSumVector(RealD *,int N); | ||||
|   void GlobalSum(uint32_t &); | ||||
|   void GlobalSum(uint64_t &); | ||||
|   void GlobalSumVector(uint64_t*,int N); | ||||
|   void GlobalSum(ComplexF &c); | ||||
|   void GlobalSumVector(ComplexF *c,int N); | ||||
|   void GlobalSum(ComplexD &c); | ||||
| @@ -192,49 +128,76 @@ class CartesianCommunicator { | ||||
|   void GlobalXOR(uint32_t &); | ||||
|   void GlobalXOR(uint64_t &); | ||||
|    | ||||
|   template<class obj> void GlobalSumP2P(obj &o) | ||||
|   { | ||||
|     std::vector<obj> column; | ||||
|     obj accum = o; | ||||
|     int source,dest; | ||||
|     for(int d=0;d<_ndimension;d++){ | ||||
|       column.resize(_processors[d]); | ||||
|       column[0] = accum; | ||||
|       std::vector<MpiCommsRequest_t> list; | ||||
|       for(int p=1;p<_processors[d];p++){ | ||||
| 	ShiftedRanks(d,p,source,dest); | ||||
| 	SendToRecvFromBegin(list, | ||||
| 			    &column[0], | ||||
| 			    dest, | ||||
| 			    &column[p], | ||||
| 			    source, | ||||
| 			    sizeof(obj),d*100+p); | ||||
| 
 | ||||
|       } | ||||
|       CommsComplete(list); | ||||
|       for(int p=1;p<_processors[d];p++){ | ||||
| 	accum = accum + column[p]; | ||||
|       } | ||||
|     } | ||||
|     Broadcast(0,accum); | ||||
|     o=accum; | ||||
|   } | ||||
| 
 | ||||
|   template<class obj> void GlobalSum(obj &o){ | ||||
|     typedef typename obj::scalar_type scalar_type; | ||||
|     int words = sizeof(obj)/sizeof(scalar_type); | ||||
|     scalar_type * ptr = (scalar_type *)& o; | ||||
|     scalar_type * ptr = (scalar_type *)& o; // Safe alias 
 | ||||
|     GlobalSumVector(ptr,words); | ||||
|   } | ||||
|    | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   // Face exchange, buffer swap in translational invariant way
 | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   void CommsComplete(std::vector<MpiCommsRequest_t> &list); | ||||
|   void SendToRecvFromBegin(std::vector<MpiCommsRequest_t> &list, | ||||
| 			   void *xmit, | ||||
| 			   int dest, | ||||
| 			   void *recv, | ||||
| 			   int from, | ||||
| 			   int bytes,int dir); | ||||
|    | ||||
|   void SendToRecvFrom(void *xmit, | ||||
| 		      int xmit_to_rank, | ||||
| 		      void *recv, | ||||
| 		      int recv_from_rank, | ||||
| 		      int bytes); | ||||
|    | ||||
|   void SendRecvPacket(void *xmit, | ||||
| 		      void *recv, | ||||
| 		      int xmit_to_rank, | ||||
| 		      int recv_from_rank, | ||||
| 		      int bytes); | ||||
|    | ||||
|   void SendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 			   void *xmit, | ||||
| 			   int xmit_to_rank, | ||||
| 			   void *recv, | ||||
| 			   int recv_from_rank, | ||||
| 			   int bytes); | ||||
|    | ||||
|   void SendToRecvFromComplete(std::vector<CommsRequest_t> &waitall); | ||||
| 
 | ||||
|   double StencilSendToRecvFrom(void *xmit, | ||||
| 			       int xmit_to_rank, | ||||
| 			       int xmit_to_rank,int do_xmit, | ||||
| 			       void *recv, | ||||
| 			       int recv_from_rank, | ||||
| 			       int recv_from_rank,int do_recv, | ||||
| 			       int bytes,int dir); | ||||
| 
 | ||||
|   double StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list, | ||||
| 				      void *xmit, | ||||
| 				      int xmit_to_rank,int do_xmit, | ||||
| 				      void *recv, | ||||
| 				      int recv_from_rank,int do_recv, | ||||
| 				      int xbytes,int rbytes,int dir); | ||||
|   double StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 				    void *xmit, | ||||
| 				    int xmit_to_rank, | ||||
| 				    int xmit_to_rank,int do_xmit, | ||||
| 				    void *recv, | ||||
| 				    int recv_from_rank, | ||||
| 				    int bytes,int dir); | ||||
| 				    int recv_from_rank,int do_recv, | ||||
| 				    int xbytes,int rbytes,int dir); | ||||
|    | ||||
|    | ||||
|   void StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int i); | ||||
| @@ -250,12 +213,30 @@ class CartesianCommunicator { | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   void Broadcast(int root,void* data, int bytes); | ||||
| 
 | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   // All2All down one dimension
 | ||||
|   ////////////////////////////////////////////////////////////
 | ||||
|   template<class T> void AllToAll(int dim,std::vector<T> &in, std::vector<T> &out){ | ||||
|     assert(dim>=0); | ||||
|     assert(dim<_ndimension); | ||||
|     assert(in.size()==out.size()); | ||||
|     int numnode = _processors[dim]; | ||||
|     uint64_t bytes=sizeof(T); | ||||
|     uint64_t words=in.size()/numnode; | ||||
|     assert(numnode * words == in.size()); | ||||
|     assert(words < (1ULL<<31)); | ||||
|     AllToAll(dim,(void *)&in[0],(void *)&out[0],words,bytes); | ||||
|   } | ||||
|   void AllToAll(int dim  ,void *in,void *out,uint64_t words,uint64_t bytes); | ||||
|   void AllToAll(void  *in,void *out,uint64_t words         ,uint64_t bytes); | ||||
|    | ||||
|   template<class obj> void Broadcast(int root,obj &data) | ||||
|   { | ||||
|     Broadcast(root,(void *)&data,sizeof(data)); | ||||
|     }; | ||||
|   } | ||||
| 
 | ||||
| };  | ||||
| } | ||||
| 
 | ||||
| NAMESPACE_END(Grid); | ||||
| 
 | ||||
| #endif | ||||
							
								
								
									
										787
									
								
								Grid/communicator/Communicator_mpi3.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										787
									
								
								Grid/communicator/Communicator_mpi3.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,787 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid | ||||
|  | ||||
|     Source file: ./lib/communicator/Communicator_mpi.cc | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #include <Grid/GridCore.h> | ||||
| #include <Grid/communicator/SharedMemory.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid); | ||||
|  | ||||
| Grid_MPI_Comm       CartesianCommunicator::communicator_world; | ||||
|  | ||||
| //////////////////////////////////////////// | ||||
| // First initialise of comms system | ||||
| //////////////////////////////////////////// | ||||
| void CartesianCommunicator::Init(int *argc, char ***argv) | ||||
| { | ||||
|  | ||||
|   int flag; | ||||
|   int provided; | ||||
|  | ||||
|   MPI_Initialized(&flag); // needed to coexist with other libs apparently | ||||
|   if ( !flag ) { | ||||
|  | ||||
| #ifndef GRID_COMMS_THREADS | ||||
|     nCommThreads=1; | ||||
|     // wrong results here too | ||||
|     // For now: comms-overlap leads to wrong results in Benchmark_wilson even on single node MPI runs | ||||
|     // other comms schemes are ok | ||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_SERIALIZED,&provided); | ||||
| #else | ||||
|     MPI_Init_thread(argc,argv,MPI_THREAD_MULTIPLE,&provided); | ||||
| #endif | ||||
|     //If only 1 comms thread we require any threading mode other than SINGLE, but for multiple comms threads we need MULTIPLE | ||||
|     if( (nCommThreads == 1) && (provided == MPI_THREAD_SINGLE) ) { | ||||
|       assert(0); | ||||
|     } | ||||
|  | ||||
|     if( (nCommThreads > 1) && (provided != MPI_THREAD_MULTIPLE) ) { | ||||
|       assert(0); | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   // Never clean up as done once. | ||||
|   MPI_Comm_dup (MPI_COMM_WORLD,&communicator_world); | ||||
|  | ||||
|   Grid_quiesce_nodes(); | ||||
|   GlobalSharedMemory::Init(communicator_world); | ||||
|   GlobalSharedMemory::SharedMemoryAllocate( | ||||
| 		   GlobalSharedMemory::MAX_MPI_SHM_BYTES, | ||||
| 		   GlobalSharedMemory::Hugepages); | ||||
|   Grid_unquiesce_nodes(); | ||||
| } | ||||
|  | ||||
| /////////////////////////////////////////////////////////////////////////// | ||||
| // Use cartesian communicators now even in MPI3 | ||||
| /////////////////////////////////////////////////////////////////////////// | ||||
| void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest) | ||||
| { | ||||
|   int ierr=MPI_Cart_shift(communicator,dim,shift,&source,&dest); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| int CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) | ||||
| { | ||||
|   int rank; | ||||
|   int ierr=MPI_Cart_rank  (communicator, &coor[0], &rank); | ||||
|   assert(ierr==0); | ||||
|   return rank; | ||||
| } | ||||
| void  CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor) | ||||
| { | ||||
|   coor.resize(_ndimension); | ||||
|   int ierr=MPI_Cart_coords  (communicator, rank, _ndimension,&coor[0]); | ||||
|   assert(ierr==0); | ||||
| } | ||||
|  | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| // Initialises from communicator_world | ||||
| //////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||
| { | ||||
|   MPI_Comm optimal_comm; | ||||
|   //////////////////////////////////////////////////// | ||||
|   // Remap using the shared memory optimising routine | ||||
|   // The remap creates a comm which must be freed | ||||
|   //////////////////////////////////////////////////// | ||||
|   GlobalSharedMemory::OptimalCommunicator    (processors,optimal_comm,_shm_processors); | ||||
|   InitFromMPICommunicator(processors,optimal_comm); | ||||
|   SetCommunicator(optimal_comm); | ||||
|   /////////////////////////////////////////////////// | ||||
|   // Free the temp communicator | ||||
|   /////////////////////////////////////////////////// | ||||
|   MPI_Comm_free(&optimal_comm); | ||||
| } | ||||
|  | ||||
| ////////////////////////////////// | ||||
| // Try to subdivide communicator | ||||
| ////////////////////////////////// | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank) | ||||
| { | ||||
|   _ndimension = processors.size();  assert(_ndimension>=1); | ||||
|   int parent_ndimension = parent._ndimension; assert(_ndimension >= parent._ndimension); | ||||
|   Coordinate parent_processor_coor(_ndimension,0); | ||||
|   Coordinate parent_processors    (_ndimension,1); | ||||
|   Coordinate shm_processors       (_ndimension,1); | ||||
|   // Can make 5d grid from 4d etc... | ||||
|   int pad = _ndimension-parent_ndimension; | ||||
|   for(int d=0;d<parent_ndimension;d++){ | ||||
|     parent_processor_coor[pad+d]=parent._processor_coor[d]; | ||||
|     parent_processors    [pad+d]=parent._processors[d]; | ||||
|     shm_processors       [pad+d]=parent._shm_processors[d]; | ||||
|   } | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // split the communicator | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   //  int Nparent = parent._processors ; | ||||
|   int Nparent; | ||||
|   MPI_Comm_size(parent.communicator,&Nparent); | ||||
|  | ||||
|   int childsize=1; | ||||
|   for(int d=0;d<processors.size();d++) { | ||||
|     childsize *= processors[d]; | ||||
|   } | ||||
|   int Nchild = Nparent/childsize; | ||||
|   assert (childsize * Nchild == Nparent); | ||||
|  | ||||
|   Coordinate ccoor(_ndimension); // coor within subcommunicator | ||||
|   Coordinate scoor(_ndimension); // coor of split within parent | ||||
|   Coordinate ssize(_ndimension); // coor of split within parent | ||||
|  | ||||
|   for(int d=0;d<_ndimension;d++){ | ||||
|     ccoor[d] = parent_processor_coor[d] % processors[d]; | ||||
|     scoor[d] = parent_processor_coor[d] / processors[d]; | ||||
|     ssize[d] = parent_processors[d]     / processors[d]; | ||||
|     if ( processors[d] < shm_processors[d] ) shm_processors[d] = processors[d]; // subnode splitting. | ||||
|   } | ||||
|  | ||||
|   // rank within subcomm ; srank is rank of subcomm within blocks of subcomms | ||||
|   int crank; | ||||
|   // Mpi uses the reverse Lexico convention to us; so reversed routines called | ||||
|   Lexicographic::IndexFromCoorReversed(ccoor,crank,processors); // processors is the split grid dimensions | ||||
|   Lexicographic::IndexFromCoorReversed(scoor,srank,ssize);      // ssize is the number of split grids | ||||
|  | ||||
|   MPI_Comm comm_split; | ||||
|   if ( Nchild > 1 ) { | ||||
|  | ||||
|     //////////////////////////////////////////////////////////////// | ||||
|     // Split the communicator | ||||
|     //////////////////////////////////////////////////////////////// | ||||
|     int ierr= MPI_Comm_split(parent.communicator,srank,crank,&comm_split); | ||||
|     assert(ierr==0); | ||||
|  | ||||
|   } else { | ||||
|     srank = 0; | ||||
|     int ierr = MPI_Comm_dup (parent.communicator,&comm_split); | ||||
|     assert(ierr==0); | ||||
|   } | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Set up from the new split communicator | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   InitFromMPICommunicator(processors,comm_split); | ||||
|  | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   // Take the right SHM buffers | ||||
|   ////////////////////////////////////////////////////////////////////////////////////////////////////// | ||||
|   SetCommunicator(comm_split); | ||||
|  | ||||
|   /////////////////////////////////////////////// | ||||
|   // Free the temp communicator | ||||
|   /////////////////////////////////////////////// | ||||
|   MPI_Comm_free(&comm_split); | ||||
|  | ||||
|   if(0){ | ||||
|     std::cout << " ndim " <<_ndimension<<" " << parent._ndimension << std::endl; | ||||
|     for(int d=0;d<processors.size();d++){ | ||||
|       std::cout << d<< " " << _processor_coor[d] <<" " <<  ccoor[d]<<std::endl; | ||||
|     } | ||||
|   } | ||||
|   for(int d=0;d<processors.size();d++){ | ||||
|     assert(_processor_coor[d] == ccoor[d] ); | ||||
|   } | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::InitFromMPICommunicator(const Coordinate &processors, MPI_Comm communicator_base) | ||||
| { | ||||
|   //////////////////////////////////////////////////// | ||||
|   // Creates communicator, and the communicator_halo | ||||
|   //////////////////////////////////////////////////// | ||||
|   _ndimension = processors.size(); | ||||
|   _processor_coor.resize(_ndimension); | ||||
|  | ||||
|   ///////////////////////////////// | ||||
|   // Count the requested nodes | ||||
|   ///////////////////////////////// | ||||
|   _Nprocessors=1; | ||||
|   _processors = processors; | ||||
|   for(int i=0;i<_ndimension;i++){ | ||||
|     _Nprocessors*=_processors[i]; | ||||
|   } | ||||
|  | ||||
|   Coordinate periodic(_ndimension,1); | ||||
|   MPI_Cart_create(communicator_base, _ndimension,&_processors[0],&periodic[0],0,&communicator); | ||||
|   MPI_Comm_rank(communicator,&_processor); | ||||
|   MPI_Cart_coords(communicator,_processor,_ndimension,&_processor_coor[0]); | ||||
|  | ||||
|   if ( 0 && (communicator_base != communicator_world) ) { | ||||
|     std::cout << "InitFromMPICommunicator Cartesian communicator created with a non-world communicator"<<std::endl; | ||||
|     std::cout << " new communicator rank "<<_processor<< " coor ["<<_ndimension<<"] "; | ||||
|     for(int d=0;d<_processors.size();d++){ | ||||
|       std::cout << _processor_coor[d]<<" "; | ||||
|     } | ||||
|     std::cout << std::endl; | ||||
|   } | ||||
|  | ||||
|   int Size; | ||||
|   MPI_Comm_size(communicator,&Size); | ||||
|  | ||||
|   communicator_halo.resize (2*_ndimension); | ||||
|   for(int i=0;i<_ndimension*2;i++){ | ||||
|     MPI_Comm_dup(communicator,&communicator_halo[i]); | ||||
|   } | ||||
|   assert(Size==_Nprocessors); | ||||
| } | ||||
|  | ||||
| CartesianCommunicator::~CartesianCommunicator() | ||||
| { | ||||
|   int MPI_is_finalised; | ||||
|   MPI_Finalized(&MPI_is_finalised); | ||||
|   if (communicator && !MPI_is_finalised) { | ||||
|     MPI_Comm_free(&communicator); | ||||
|     for(int i=0;i<communicator_halo.size();i++){ | ||||
|       MPI_Comm_free(&communicator_halo[i]); | ||||
|     } | ||||
|   } | ||||
| } | ||||
| #ifdef USE_GRID_REDUCTION | ||||
| void CartesianCommunicator::GlobalSum(float &f){ | ||||
|   CartesianCommunicator::GlobalSumP2P(f); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(double &d) | ||||
| { | ||||
|   CartesianCommunicator::GlobalSumP2P(d); | ||||
| } | ||||
| #else | ||||
| void CartesianCommunicator::GlobalSum(float &f){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(double &d) | ||||
| { | ||||
|   int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| #endif | ||||
| void CartesianCommunicator::GlobalSum(uint32_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSum(uint64_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSumVector(uint64_t* u,int N){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,u,N,MPI_UINT64_T,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalXOR(uint32_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT32_T,MPI_BXOR,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalXOR(uint64_t &u){ | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&u,1,MPI_UINT64_T,MPI_BXOR,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalMax(float &f) | ||||
| { | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,&f,1,MPI_FLOAT,MPI_MAX,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalMax(double &d) | ||||
| { | ||||
|   int ierr = MPI_Allreduce(MPI_IN_PLACE,&d,1,MPI_DOUBLE,MPI_MAX,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSumVector(float *f,int N) | ||||
| { | ||||
|   int ierr=MPI_Allreduce(MPI_IN_PLACE,f,N,MPI_FLOAT,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::GlobalSumVector(double *d,int N) | ||||
| { | ||||
|   int ierr = MPI_Allreduce(MPI_IN_PLACE,d,N,MPI_DOUBLE,MPI_SUM,communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<MpiCommsRequest_t> &list, | ||||
| 						void *xmit, | ||||
| 						int dest, | ||||
| 						void *recv, | ||||
| 						int from, | ||||
| 						int bytes,int dir) | ||||
| { | ||||
|   MPI_Request xrq; | ||||
|   MPI_Request rrq; | ||||
|  | ||||
|   assert(dest != _processor); | ||||
|   assert(from != _processor); | ||||
|  | ||||
|   int tag; | ||||
|  | ||||
|   tag= dir+from*32; | ||||
|   int ierr=MPI_Irecv(recv, bytes, MPI_CHAR,from,tag,communicator,&rrq); | ||||
|   assert(ierr==0); | ||||
|   list.push_back(rrq); | ||||
|    | ||||
|   tag= dir+_processor*32; | ||||
|   ierr =MPI_Isend(xmit, bytes, MPI_CHAR,dest,tag,communicator,&xrq); | ||||
|   assert(ierr==0); | ||||
|   list.push_back(xrq); | ||||
| } | ||||
| void CartesianCommunicator::CommsComplete(std::vector<MpiCommsRequest_t> &list) | ||||
| { | ||||
|   int nreq=list.size(); | ||||
|  | ||||
|   if (nreq==0) return; | ||||
|  | ||||
|   std::vector<MPI_Status> status(nreq); | ||||
|   int ierr = MPI_Waitall(nreq,&list[0],&status[0]); | ||||
|   assert(ierr==0); | ||||
|   list.resize(0); | ||||
| } | ||||
|  | ||||
| // Basic Halo comms primitive | ||||
| void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| 					   int dest, | ||||
| 					   void *recv, | ||||
| 					   int from, | ||||
| 					   int bytes) | ||||
| { | ||||
|   std::vector<MpiCommsRequest_t> reqs(0); | ||||
|   unsigned long  xcrc = crc32(0L, Z_NULL, 0); | ||||
|   unsigned long  rcrc = crc32(0L, Z_NULL, 0); | ||||
|  | ||||
|   int myrank = _processor; | ||||
|   int ierr; | ||||
|  | ||||
|   // Enforce no UVM in comms, device or host OK | ||||
|   assert(acceleratorIsCommunicable(xmit)); | ||||
|   assert(acceleratorIsCommunicable(recv)); | ||||
|  | ||||
|   // Give the CPU to MPI immediately; can use threads to overlap optionally | ||||
|   //  printf("proc %d SendToRecvFrom %d bytes Sendrecv \n",_processor,bytes); | ||||
|   ierr=MPI_Sendrecv(xmit,bytes,MPI_CHAR,dest,myrank, | ||||
| 		    recv,bytes,MPI_CHAR,from, from, | ||||
| 		    communicator,MPI_STATUS_IGNORE); | ||||
|   assert(ierr==0); | ||||
|  | ||||
|   //  xcrc = crc32(xcrc,(unsigned char *)xmit,bytes); | ||||
|   //  rcrc = crc32(rcrc,(unsigned char *)recv,bytes); | ||||
|   //  printf("proc %d SendToRecvFrom %d bytes xcrc %lx rcrc %lx\n",_processor,bytes,xcrc,rcrc); fflush | ||||
| } | ||||
| // Basic Halo comms primitive | ||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||
| 						     int dest, int dox, | ||||
| 						     void *recv, | ||||
| 						     int from, int dor, | ||||
| 						     int bytes,int dir) | ||||
| { | ||||
|   std::vector<CommsRequest_t> list; | ||||
|   double offbytes = StencilSendToRecvFromPrepare(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir); | ||||
|   offbytes       += StencilSendToRecvFromBegin(list,xmit,dest,dox,recv,from,dor,bytes,bytes,dir); | ||||
|   StencilSendToRecvFromComplete(list,dir); | ||||
|   return offbytes; | ||||
| } | ||||
|  | ||||
|  | ||||
| #ifdef ACCELERATOR_AWARE_MPI | ||||
| double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list, | ||||
| 							   void *xmit, | ||||
| 							   int dest,int dox, | ||||
| 							   void *recv, | ||||
| 							   int from,int dor, | ||||
| 							   int xbytes,int rbytes,int dir) | ||||
| { | ||||
|   return 0.0; // Do nothing -- no preparation required | ||||
| } | ||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 							 void *xmit, | ||||
| 							 int dest,int dox, | ||||
| 							 void *recv, | ||||
| 							 int from,int dor, | ||||
| 							 int xbytes,int rbytes,int dir) | ||||
| { | ||||
|   int ncomm  =communicator_halo.size(); | ||||
|   int commdir=dir%ncomm; | ||||
|  | ||||
|   MPI_Request xrq; | ||||
|   MPI_Request rrq; | ||||
|  | ||||
|   int ierr; | ||||
|   int gdest = ShmRanks[dest]; | ||||
|   int gfrom = ShmRanks[from]; | ||||
|   int gme   = ShmRanks[_processor]; | ||||
|  | ||||
|   assert(dest != _processor); | ||||
|   assert(from != _processor); | ||||
|   assert(gme  == ShmRank); | ||||
|   double off_node_bytes=0.0; | ||||
|   int tag; | ||||
|    | ||||
|   if ( dor ) { | ||||
|     if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
|       tag= dir+from*32; | ||||
|       ierr=MPI_Irecv(recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq); | ||||
|       assert(ierr==0); | ||||
|       list.push_back(rrq); | ||||
|       off_node_bytes+=rbytes; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   if (dox) { | ||||
|     if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
|       tag= dir+_processor*32; | ||||
|       ierr =MPI_Isend(xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||
|       assert(ierr==0); | ||||
|       list.push_back(xrq); | ||||
|       off_node_bytes+=xbytes; | ||||
|     } else { | ||||
|       void *shm = (void *) this->ShmBufferTranslate(dest,recv); | ||||
|       assert(shm!=NULL); | ||||
|       acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes); | ||||
|     } | ||||
|   } | ||||
|   return off_node_bytes; | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir) | ||||
| { | ||||
|   int nreq=list.size(); | ||||
|  | ||||
|   acceleratorCopySynchronise(); | ||||
|  | ||||
|   if (nreq==0) return; | ||||
|   std::vector<MPI_Status> status(nreq); | ||||
|   int ierr = MPI_Waitall(nreq,&list[0],&status[0]); | ||||
|   assert(ierr==0); | ||||
|   list.resize(0); | ||||
|   this->StencilBarrier();  | ||||
| } | ||||
|  | ||||
| #else /* NOT     ... ACCELERATOR_AWARE_MPI */ | ||||
| /////////////////////////////////////////// | ||||
| // Pipeline mode through host memory | ||||
| /////////////////////////////////////////// | ||||
|   /* | ||||
|    * In prepare (phase 1): | ||||
|    * PHASE 1: (prepare) | ||||
|    * - post MPI receive buffers asynch | ||||
|    * - post device - host send buffer transfer asynch | ||||
|    * PHASE 2: (Begin) | ||||
|    * - complete all copies | ||||
|    * - post MPI send asynch | ||||
|    * - post device - device transfers | ||||
|    * PHASE 3: (Complete) | ||||
|    * - MPI_waitall | ||||
|    * - host-device transfers | ||||
|    * | ||||
|    ********************************* | ||||
|    * NB could split this further: | ||||
|    *-------------------------------- | ||||
|    * PHASE 1: (Prepare) | ||||
|    * - post MPI receive buffers asynch | ||||
|    * - post device - host send buffer transfer asynch | ||||
|    * PHASE 2: (BeginInterNode) | ||||
|    * - complete all copies  | ||||
|    * - post MPI send asynch | ||||
|    * PHASE 3: (BeginIntraNode) | ||||
|    * - post device - device transfers | ||||
|    * PHASE 4: (Complete) | ||||
|    * - MPI_waitall | ||||
|    * - host-device transfers asynch | ||||
|    * - (complete all copies)  | ||||
|    */ | ||||
| double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list, | ||||
| 							   void *xmit, | ||||
| 							   int dest,int dox, | ||||
| 							   void *recv, | ||||
| 							   int from,int dor, | ||||
| 							   int xbytes,int rbytes,int dir) | ||||
| { | ||||
| /* | ||||
|  * Bring sequence from Stencil.h down to lower level. | ||||
|  * Assume using XeLink is ok | ||||
|  */   | ||||
|   int ncomm  =communicator_halo.size(); | ||||
|   int commdir=dir%ncomm; | ||||
|  | ||||
|   MPI_Request xrq; | ||||
|   MPI_Request rrq; | ||||
|  | ||||
|   int ierr; | ||||
|   int gdest = ShmRanks[dest]; | ||||
|   int gfrom = ShmRanks[from]; | ||||
|   int gme   = ShmRanks[_processor]; | ||||
|  | ||||
|   assert(dest != _processor); | ||||
|   assert(from != _processor); | ||||
|   assert(gme  == ShmRank); | ||||
|   double off_node_bytes=0.0; | ||||
|   int tag; | ||||
|  | ||||
|   void * host_recv = NULL; | ||||
|   void * host_xmit = NULL; | ||||
|  | ||||
|   /* | ||||
|    * PHASE 1: (Prepare) | ||||
|    * - post MPI receive buffers asynch | ||||
|    * - post device - host send buffer transfer asynch | ||||
|    */ | ||||
|    | ||||
|   if ( dor ) { | ||||
|     if ( (gfrom ==MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
|       tag= dir+from*32; | ||||
|       host_recv = this->HostBufferMalloc(rbytes); | ||||
|       ierr=MPI_Irecv(host_recv, rbytes, MPI_CHAR,from,tag,communicator_halo[commdir],&rrq); | ||||
|       assert(ierr==0); | ||||
|       CommsRequest_t srq; | ||||
|       srq.PacketType = InterNodeRecv; | ||||
|       srq.bytes      = rbytes; | ||||
|       srq.req        = rrq; | ||||
|       srq.host_buf   = host_recv; | ||||
|       srq.device_buf = recv; | ||||
|       list.push_back(srq); | ||||
|       off_node_bytes+=rbytes; | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   if (dox) { | ||||
|     if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
| #undef DEVICE_TO_HOST_CONCURRENT // pipeline | ||||
| #ifdef DEVICE_TO_HOST_CONCURRENT | ||||
|       tag= dir+_processor*32; | ||||
|  | ||||
|       host_xmit = this->HostBufferMalloc(xbytes); | ||||
|       acceleratorCopyFromDeviceAsynch(xmit, host_xmit,xbytes); // Make this Asynch | ||||
|        | ||||
|       //      ierr =MPI_Isend(host_xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||
|       //      assert(ierr==0); | ||||
|       //      off_node_bytes+=xbytes; | ||||
|  | ||||
|       CommsRequest_t srq; | ||||
|       srq.PacketType = InterNodeXmit; | ||||
|       srq.bytes      = xbytes; | ||||
|       //      srq.req        = xrq; | ||||
|       srq.host_buf   = host_xmit; | ||||
|       srq.device_buf = xmit; | ||||
|       list.push_back(srq); | ||||
| #else | ||||
|       tag= dir+_processor*32; | ||||
|  | ||||
|       host_xmit = this->HostBufferMalloc(xbytes); | ||||
|       const int chunks=1; | ||||
|       for(int n=0;n<chunks;n++){ | ||||
| 	void * host_xmitc = (void *)( (uint64_t) host_xmit + n*xbytes/chunks); | ||||
| 	void * xmitc      = (void *)( (uint64_t) xmit      + n*xbytes/chunks); | ||||
| 	acceleratorCopyFromDeviceAsynch(xmitc, host_xmitc,xbytes/chunks); // Make this Asynch | ||||
|       } | ||||
|       acceleratorCopySynchronise(); // Complete all pending copy transfers | ||||
|        | ||||
|       ierr =MPI_Isend(host_xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||
|       assert(ierr==0); | ||||
|       off_node_bytes+=xbytes; | ||||
|  | ||||
|       CommsRequest_t srq; | ||||
|       srq.PacketType = InterNodeXmit; | ||||
|       srq.bytes      = xbytes; | ||||
|       srq.req        = xrq; | ||||
|       srq.host_buf   = host_xmit; | ||||
|       srq.device_buf = xmit; | ||||
|       list.push_back(srq); | ||||
| #endif | ||||
|     } | ||||
|   } | ||||
|  | ||||
|   return off_node_bytes; | ||||
| } | ||||
|  | ||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 							 void *xmit, | ||||
| 							 int dest,int dox, | ||||
| 							 void *recv, | ||||
| 							 int from,int dor, | ||||
| 							 int xbytes,int rbytes,int dir) | ||||
| { | ||||
|   int ncomm  =communicator_halo.size(); | ||||
|   int commdir=dir%ncomm; | ||||
|  | ||||
|   MPI_Request xrq; | ||||
|   MPI_Request rrq; | ||||
|  | ||||
|   int ierr; | ||||
|   int gdest = ShmRanks[dest]; | ||||
|   int gfrom = ShmRanks[from]; | ||||
|   int gme   = ShmRanks[_processor]; | ||||
|  | ||||
|   assert(dest != _processor); | ||||
|   assert(from != _processor); | ||||
|   assert(gme  == ShmRank); | ||||
|   double off_node_bytes=0.0; | ||||
|   int tag; | ||||
|  | ||||
|   void * host_xmit = NULL; | ||||
|  | ||||
|   //////////////////////////////// | ||||
|   // Receives already posted | ||||
|   // Copies already started | ||||
|   //////////////////////////////// | ||||
|   /*   | ||||
|    * PHASE 2: (Begin) | ||||
|    * - complete all copies | ||||
|    * - post MPI send asynch | ||||
|    */ | ||||
|  | ||||
|   //  static int printed; | ||||
|   //  if((printed<8) && this->IsBoss() ) { | ||||
|   //    printf("dir %d doX %d doR %d Face size %ld %ld\n",dir,dox,dor,xbytes,rbytes); | ||||
|   //    printed++; | ||||
|   //  } | ||||
|    | ||||
|   if (dox) { | ||||
|  | ||||
|     if ( (gdest == MPI_UNDEFINED) || Stencil_force_mpi ) { | ||||
| #ifdef DEVICE_TO_HOST_CONCURRENT | ||||
|       tag= dir+_processor*32; | ||||
|       // Find the send in the prepared list | ||||
|       int list_idx=-1; | ||||
|       for(int idx = 0; idx<list.size();idx++){ | ||||
|  | ||||
| 	if ( (list[idx].device_buf==xmit) | ||||
| 	   &&(list[idx].PacketType==InterNodeXmit) | ||||
| 	   &&(list[idx].bytes==xbytes) ) { | ||||
|  | ||||
| 	  list_idx = idx; | ||||
| 	  host_xmit = list[idx].host_buf; | ||||
| 	} | ||||
|       } | ||||
|       assert(list_idx != -1); // found it | ||||
|       ierr =MPI_Isend(host_xmit, xbytes, MPI_CHAR,dest,tag,communicator_halo[commdir],&xrq); | ||||
|       assert(ierr==0); | ||||
|       list[list_idx].req        = xrq; // Update the MPI request in the list | ||||
|       off_node_bytes+=xbytes; | ||||
| #endif       | ||||
|     } else { | ||||
|       void *shm = (void *) this->ShmBufferTranslate(dest,recv); | ||||
|       assert(shm!=NULL); | ||||
|       acceleratorCopyDeviceToDeviceAsynch(xmit,shm,xbytes); | ||||
|     } | ||||
|   } | ||||
|   return off_node_bytes; | ||||
| } | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &list,int dir) | ||||
| { | ||||
|   int nreq=list.size(); | ||||
|  | ||||
|   if (nreq==0) return; | ||||
|   std::vector<MPI_Status> status(nreq); | ||||
|   std::vector<MPI_Request> MpiRequests(nreq); | ||||
|  | ||||
|   for(int r=0;r<nreq;r++){ | ||||
|     MpiRequests[r] = list[r].req; | ||||
|   } | ||||
|    | ||||
|   int ierr = MPI_Waitall(nreq,&MpiRequests[0],&status[0]); | ||||
|   assert(ierr==0); | ||||
|  | ||||
|   for(int r=0;r<nreq;r++){ | ||||
|     if ( list[r].PacketType==InterNodeRecv ) { | ||||
|       acceleratorCopyToDeviceAsynch(list[r].host_buf,list[r].device_buf,list[r].bytes); | ||||
|     } | ||||
|   } | ||||
|    | ||||
|   acceleratorCopySynchronise(); // Complete all pending copy transfers | ||||
|   list.resize(0);               // Delete the list | ||||
|   this->HostBufferFreeAll();    // Clean up the buffer allocs | ||||
|   this->StencilBarrier();  | ||||
| } | ||||
| #endif | ||||
| //////////////////////////////////////////// | ||||
| // END PIPELINE MODE / NO CUDA AWARE MPI | ||||
| //////////////////////////////////////////// | ||||
|  | ||||
| void CartesianCommunicator::StencilBarrier(void) | ||||
| { | ||||
|   MPI_Barrier  (ShmComm); | ||||
| } | ||||
| //void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||
| //{ | ||||
| //} | ||||
| void CartesianCommunicator::Barrier(void) | ||||
| { | ||||
|   int ierr = MPI_Barrier(communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::Broadcast(int root,void* data, int bytes) | ||||
| { | ||||
|   int ierr=MPI_Bcast(data, | ||||
| 		     bytes, | ||||
| 		     MPI_BYTE, | ||||
| 		     root, | ||||
| 		     communicator); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| int CartesianCommunicator::RankWorld(void){ | ||||
|   int r; | ||||
|   MPI_Comm_rank(communicator_world,&r); | ||||
|   return r; | ||||
| } | ||||
| void CartesianCommunicator::BarrierWorld(void){ | ||||
|   int ierr = MPI_Barrier(communicator_world); | ||||
|   assert(ierr==0); | ||||
| } | ||||
| void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) | ||||
| { | ||||
|   int ierr= MPI_Bcast(data, | ||||
| 		      bytes, | ||||
| 		      MPI_BYTE, | ||||
| 		      root, | ||||
| 		      communicator_world); | ||||
|   assert(ierr==0); | ||||
| } | ||||
|  | ||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||
| { | ||||
|   Coordinate row(_ndimension,1); | ||||
|   assert(dim>=0 && dim<_ndimension); | ||||
|  | ||||
|   //  Split the communicator | ||||
|   row[dim] = _processors[dim]; | ||||
|  | ||||
|   int me; | ||||
|   CartesianCommunicator Comm(row,*this,me); | ||||
|   Comm.AllToAll(in,out,words,bytes); | ||||
| } | ||||
| void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t bytes) | ||||
| { | ||||
|   // MPI is a pain and uses "int" arguments | ||||
|   // 64*64*64*128*16 == 500Million elements of data. | ||||
|   // When 24*4 bytes multiples get 50x 10^9 >>> 2x10^9 Y2K bug. | ||||
|   // (Turns up on 32^3 x 64 Gparity too) | ||||
|   MPI_Datatype object; | ||||
|   int iwords; | ||||
|   int ibytes; | ||||
|   iwords = words; | ||||
|   ibytes = bytes; | ||||
|   assert(words == iwords); // safe to cast to int ? | ||||
|   assert(bytes == ibytes); // safe to cast to int ? | ||||
|   MPI_Type_contiguous(ibytes,MPI_BYTE,&object); | ||||
|   MPI_Type_commit(&object); | ||||
|   MPI_Alltoall(in,iwords,object,out,iwords,object,communicator); | ||||
|   MPI_Type_free(&object); | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid); | ||||
| @@ -1,4 +1,4 @@ | ||||
|     /*************************************************************************************
 | ||||
| /*************************************************************************************
 | ||||
| 
 | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
| 
 | ||||
| @@ -23,25 +23,38 @@ Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
| 
 | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
|     *************************************************************************************/ | ||||
|     /*  END LEGAL */ | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
| #include <Grid/GridCore.h> | ||||
| 
 | ||||
| namespace Grid { | ||||
| NAMESPACE_BEGIN(Grid); | ||||
| 
 | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| // Info that is setup once and indept of cartesian layout
 | ||||
| ///////////////////////////////////////////////////////////////////////////////////////////////////
 | ||||
| Grid_MPI_Comm       CartesianCommunicator::communicator_world; | ||||
| 
 | ||||
| void CartesianCommunicator::Init(int *argc, char *** arv) | ||||
| { | ||||
|   ShmInitGeneric(); | ||||
|   GlobalSharedMemory::Init(communicator_world); | ||||
|   GlobalSharedMemory::SharedMemoryAllocate( | ||||
| 					   GlobalSharedMemory::MAX_MPI_SHM_BYTES, | ||||
| 					   GlobalSharedMemory::Hugepages); | ||||
| } | ||||
| 
 | ||||
| CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors) | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors,const CartesianCommunicator &parent,int &srank)  | ||||
|   : CartesianCommunicator(processors)  | ||||
| { | ||||
|   _shm_processors = Coordinate(processors.size(),1); | ||||
|   srank=0; | ||||
|   SetCommunicator(communicator_world); | ||||
| } | ||||
| 
 | ||||
| CartesianCommunicator::CartesianCommunicator(const Coordinate &processors) | ||||
| { | ||||
|   _shm_processors = Coordinate(processors.size(),1); | ||||
|   _processors = processors; | ||||
|   _ndimension = processors.size(); | ||||
|   _ndimension = processors.size();  assert(_ndimension>=1); | ||||
|   _processor_coor.resize(_ndimension); | ||||
|    | ||||
|   // Require 1^N processor grid for fake
 | ||||
| @@ -51,26 +64,23 @@ CartesianCommunicator::CartesianCommunicator(const std::vector<int> &processors) | ||||
|     assert(_processors[d]==1); | ||||
|     _processor_coor[d] = 0; | ||||
|   } | ||||
|   SetCommunicator(communicator_world); | ||||
| } | ||||
| 
 | ||||
| CartesianCommunicator::~CartesianCommunicator(){} | ||||
| 
 | ||||
| void CartesianCommunicator::GlobalMax(float &){} | ||||
| void CartesianCommunicator::GlobalMax(double &){} | ||||
| void CartesianCommunicator::GlobalSum(float &){} | ||||
| void CartesianCommunicator::GlobalSumVector(float *,int N){} | ||||
| void CartesianCommunicator::GlobalSum(double &){} | ||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||
| void CartesianCommunicator::GlobalSum(uint32_t &){} | ||||
| void CartesianCommunicator::GlobalSum(uint64_t &){} | ||||
| void CartesianCommunicator::GlobalSumVector(double *,int N){} | ||||
| void CartesianCommunicator::GlobalSumVector(uint64_t *,int N){} | ||||
| void CartesianCommunicator::GlobalXOR(uint32_t &){} | ||||
| void CartesianCommunicator::GlobalXOR(uint64_t &){} | ||||
| 
 | ||||
| void CartesianCommunicator::SendRecvPacket(void *xmit, | ||||
| 					   void *recv, | ||||
| 					   int xmit_to_rank, | ||||
| 					   int recv_from_rank, | ||||
| 					   int bytes) | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| // Basic Halo comms primitive -- should never call in single node
 | ||||
| void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| @@ -81,33 +91,71 @@ void CartesianCommunicator::SendToRecvFrom(void *xmit, | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
| void CartesianCommunicator::CommsComplete(std::vector<CommsRequest_t> &list){ assert(0);} | ||||
| void CartesianCommunicator::SendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 						void *xmit, | ||||
| 						int dest, | ||||
| 						void *recv, | ||||
| 						int from, | ||||
| 						int bytes) | ||||
| 						int bytes,int dir) | ||||
| { | ||||
|   assert(0); | ||||
| } | ||||
| 
 | ||||
| void CartesianCommunicator::SendToRecvFromComplete(std::vector<CommsRequest_t> &list) | ||||
| void CartesianCommunicator::AllToAll(int dim,void  *in,void *out,uint64_t words,uint64_t bytes) | ||||
| { | ||||
|   assert(0); | ||||
|   bcopy(in,out,bytes*words); | ||||
| } | ||||
| void CartesianCommunicator::AllToAll(void  *in,void *out,uint64_t words,uint64_t bytes) | ||||
| { | ||||
|   bcopy(in,out,bytes*words); | ||||
| } | ||||
| 
 | ||||
| int  CartesianCommunicator::RankWorld(void){return 0;} | ||||
| void CartesianCommunicator::Barrier(void){} | ||||
| void CartesianCommunicator::Broadcast(int root,void* data, int bytes) {} | ||||
| void CartesianCommunicator::BroadcastWorld(int root,void* data, int bytes) { } | ||||
| int  CartesianCommunicator::RankFromProcessorCoor(std::vector<int> &coor) {  return 0;} | ||||
| void CartesianCommunicator::ProcessorCoorFromRank(int rank, std::vector<int> &coor){  coor = _processor_coor; } | ||||
| void CartesianCommunicator::BarrierWorld(void) { } | ||||
| int  CartesianCommunicator::RankFromProcessorCoor(Coordinate &coor) {  return 0;} | ||||
| void CartesianCommunicator::ProcessorCoorFromRank(int rank, Coordinate &coor){  coor = _processor_coor; } | ||||
| void CartesianCommunicator::ShiftedRanks(int dim,int shift,int &source,int &dest) | ||||
| { | ||||
|   source =0; | ||||
|   dest=0; | ||||
| } | ||||
| 
 | ||||
| 
 | ||||
| double CartesianCommunicator::StencilSendToRecvFrom( void *xmit, | ||||
| 						     int xmit_to_rank,int dox, | ||||
| 						     void *recv, | ||||
| 						     int recv_from_rank,int dor, | ||||
| 						     int bytes, int dir) | ||||
| { | ||||
|   return 2.0*bytes; | ||||
| } | ||||
| double CartesianCommunicator::StencilSendToRecvFromPrepare(std::vector<CommsRequest_t> &list, | ||||
| 							   void *xmit, | ||||
| 							   int xmit_to_rank,int dox, | ||||
| 							   void *recv, | ||||
| 							   int recv_from_rank,int dor, | ||||
| 							   int xbytes,int rbytes, int dir) | ||||
| { | ||||
|   return xbytes+rbytes; | ||||
| } | ||||
| double CartesianCommunicator::StencilSendToRecvFromBegin(std::vector<CommsRequest_t> &list, | ||||
| 							 void *xmit, | ||||
| 							 int xmit_to_rank,int dox, | ||||
| 							 void *recv, | ||||
| 							 int recv_from_rank,int dor, | ||||
| 							 int xbytes,int rbytes, int dir) | ||||
| { | ||||
|   return xbytes+rbytes; | ||||
| } | ||||
| void CartesianCommunicator::StencilSendToRecvFromComplete(std::vector<CommsRequest_t> &waitall,int dir) | ||||
| { | ||||
| } | ||||
| 
 | ||||
| void CartesianCommunicator::StencilBarrier(void){}; | ||||
| 
 | ||||
| NAMESPACE_END(Grid); | ||||
| 
 | ||||
| 
 | ||||
							
								
								
									
										172
									
								
								Grid/communicator/SharedMemory.cc
									
									
									
									
									
										Normal file
									
								
							
							
						
						
									
										172
									
								
								Grid/communicator/SharedMemory.cc
									
									
									
									
									
										Normal file
									
								
							| @@ -0,0 +1,172 @@ | ||||
| /************************************************************************************* | ||||
|  | ||||
|     Grid physics library, www.github.com/paboyle/Grid  | ||||
|  | ||||
|     Source file: ./lib/communicator/SharedMemory.cc | ||||
|  | ||||
|     Copyright (C) 2015 | ||||
|  | ||||
| Author: Peter Boyle <paboyle@ph.ed.ac.uk> | ||||
|  | ||||
|     This program is free software; you can redistribute it and/or modify | ||||
|     it under the terms of the GNU General Public License as published by | ||||
|     the Free Software Foundation; either version 2 of the License, or | ||||
|     (at your option) any later version. | ||||
|  | ||||
|     This program is distributed in the hope that it will be useful, | ||||
|     but WITHOUT ANY WARRANTY; without even the implied warranty of | ||||
|     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | ||||
|     GNU General Public License for more details. | ||||
|  | ||||
|     You should have received a copy of the GNU General Public License along | ||||
|     with this program; if not, write to the Free Software Foundation, Inc., | ||||
|     51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. | ||||
|  | ||||
|     See the full license in the file "LICENSE" in the top level distribution directory | ||||
| *************************************************************************************/ | ||||
| /*  END LEGAL */ | ||||
|  | ||||
| #include <Grid/GridCore.h> | ||||
|  | ||||
| NAMESPACE_BEGIN(Grid);  | ||||
|  | ||||
| // static data | ||||
|  | ||||
| int                 GlobalSharedMemory::HPEhypercube = 1; | ||||
| uint64_t            GlobalSharedMemory::MAX_MPI_SHM_BYTES   = 1024LL*1024LL*1024LL;  | ||||
| int                 GlobalSharedMemory::Hugepages = 0; | ||||
| int                 GlobalSharedMemory::_ShmSetup; | ||||
| int                 GlobalSharedMemory::_ShmAlloc; | ||||
| uint64_t            GlobalSharedMemory::_ShmAllocBytes; | ||||
|  | ||||
| std::vector<void *> GlobalSharedMemory::WorldShmCommBufs; | ||||
| #ifndef ACCELERATOR_AWARE_MPI | ||||
| void * GlobalSharedMemory::HostCommBuf; | ||||
| #endif | ||||
|  | ||||
| Grid_MPI_Comm       GlobalSharedMemory::WorldShmComm; | ||||
| int                 GlobalSharedMemory::WorldShmRank; | ||||
| int                 GlobalSharedMemory::WorldShmSize; | ||||
| std::vector<int>    GlobalSharedMemory::WorldShmRanks; | ||||
|  | ||||
| Grid_MPI_Comm       GlobalSharedMemory::WorldComm; | ||||
| int                 GlobalSharedMemory::WorldSize; | ||||
| int                 GlobalSharedMemory::WorldRank; | ||||
|  | ||||
| int                 GlobalSharedMemory::WorldNodes; | ||||
| int                 GlobalSharedMemory::WorldNode; | ||||
|  | ||||
| void GlobalSharedMemory::SharedMemoryFree(void) | ||||
| { | ||||
|   assert(_ShmAlloc); | ||||
|   assert(_ShmAllocBytes>0); | ||||
|   for(int r=0;r<WorldShmSize;r++){ | ||||
|     munmap(WorldShmCommBufs[r],_ShmAllocBytes); | ||||
|   } | ||||
|   _ShmAlloc = 0; | ||||
|   _ShmAllocBytes = 0; | ||||
| } | ||||
| ///////////////////////////////// | ||||
| // Alloc, free shmem region | ||||
| ///////////////////////////////// | ||||
| #ifndef ACCELERATOR_AWARE_MPI | ||||
| void *SharedMemory::HostBufferMalloc(size_t bytes){ | ||||
|   void *ptr = (void *)host_heap_top; | ||||
|   host_heap_top  += bytes; | ||||
|   host_heap_bytes+= bytes; | ||||
|   if (host_heap_bytes >= host_heap_size) { | ||||
|     std::cout<< " HostBufferMalloc exceeded heap size -- try increasing with --shm <MB> flag" <<std::endl; | ||||
|     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; | ||||
|     std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current bytes is " << (host_heap_bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current heap  is " << (host_heap_size/(1024*1024)) <<"MB"<<std::endl; | ||||
|     assert(host_heap_bytes<host_heap_size); | ||||
|   } | ||||
|   return ptr; | ||||
| } | ||||
| void SharedMemory::HostBufferFreeAll(void) {  | ||||
|   host_heap_top  =(size_t)HostCommBuf; | ||||
|   host_heap_bytes=0; | ||||
| } | ||||
| #endif | ||||
| void *SharedMemory::ShmBufferMalloc(size_t bytes){ | ||||
|   //  bytes = (bytes+sizeof(vRealD))&(~(sizeof(vRealD)-1));// align up bytes | ||||
|   void *ptr = (void *)heap_top; | ||||
|   heap_top  += bytes; | ||||
|   heap_bytes+= bytes; | ||||
|   if (heap_bytes >= heap_size) { | ||||
|     std::cout<< " ShmBufferMalloc exceeded shared heap size -- try increasing with --shm <MB> flag" <<std::endl; | ||||
|     std::cout<< " Parameter specified in units of MB (megabytes) " <<std::endl; | ||||
|     std::cout<< " Current alloc is " << (bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current bytes is " << (heap_bytes/(1024*1024)) <<"MB"<<std::endl; | ||||
|     std::cout<< " Current heap  is " << (heap_size/(1024*1024)) <<"MB"<<std::endl; | ||||
|     assert(heap_bytes<heap_size); | ||||
|   } | ||||
|   //std::cerr << "ShmBufferMalloc "<<std::hex<< ptr<<" - "<<((uint64_t)ptr+bytes)<<std::dec<<std::endl; | ||||
|   return ptr; | ||||
| } | ||||
| void SharedMemory::ShmBufferFreeAll(void) {  | ||||
|   heap_top  =(size_t)ShmBufferSelf(); | ||||
|   heap_bytes=0; | ||||
| } | ||||
| void *SharedMemory::ShmBufferSelf(void) | ||||
| { | ||||
|   //std::cerr << "ShmBufferSelf "<<ShmRank<<" "<<std::hex<< ShmCommBufs[ShmRank] <<std::dec<<std::endl; | ||||
|   return ShmCommBufs[ShmRank]; | ||||
| } | ||||
| static inline int divides(int a,int b) | ||||
| { | ||||
|   return ( b == ( (b/a)*a ) ); | ||||
| } | ||||
| void GlobalSharedMemory::GetShmDims(const Coordinate &WorldDims,Coordinate &ShmDims) | ||||
| { | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Allow user to configure through environment variable | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   char* str = getenv(("GRID_SHM_DIMS_" + std::to_string(ShmDims.size())).c_str()); | ||||
|   if ( str ) { | ||||
|     std::vector<int> IntShmDims; | ||||
|     GridCmdOptionIntVector(std::string(str),IntShmDims); | ||||
|     assert(IntShmDims.size() == WorldDims.size()); | ||||
|     long ShmSize = 1; | ||||
|     for (int dim=0;dim<WorldDims.size();dim++) { | ||||
|       ShmSize *= (ShmDims[dim] = IntShmDims[dim]); | ||||
|       assert(divides(ShmDims[dim],WorldDims[dim])); | ||||
|     } | ||||
|     assert(ShmSize == WorldShmSize); | ||||
|     return; | ||||
|   } | ||||
|    | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   // Powers of 2,3,5 only in prime decomposition for now | ||||
|   //////////////////////////////////////////////////////////////// | ||||
|   int ndimension = WorldDims.size(); | ||||
|   ShmDims=Coordinate(ndimension,1); | ||||
|  | ||||
|   std::vector<int> primes({2,3,5}); | ||||
|  | ||||
|   int dim = 0; | ||||
|   int last_dim = ndimension - 1; | ||||
|   int AutoShmSize = 1; | ||||
|   while(AutoShmSize != WorldShmSize) { | ||||
|     int p; | ||||
|     for(p=0;p<primes.size();p++) { | ||||
|       int prime=primes[p]; | ||||
|       if ( divides(prime,WorldDims[dim]/ShmDims[dim]) | ||||
|         && divides(prime,WorldShmSize/AutoShmSize)  ) { | ||||
|   AutoShmSize*=prime; | ||||
|   ShmDims[dim]*=prime; | ||||
|   last_dim = dim; | ||||
|   break; | ||||
|       } | ||||
|     } | ||||
|     if (p == primes.size() && last_dim == dim) { | ||||
|       std::cerr << "GlobalSharedMemory::GetShmDims failed" << std::endl; | ||||
|       exit(EXIT_FAILURE); | ||||
|     } | ||||
|     dim=(dim+1) %ndimension; | ||||
|   } | ||||
| } | ||||
|  | ||||
| NAMESPACE_END(Grid);  | ||||
|  | ||||
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